SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23542 |
| rosa_chinensis | RchiOBHm_Chr1g0323881 RchiOBHm_Chr1g0363301 RchiOBHm_Chr3g0488451 RchiOBHm_Chr4g0387101 RchiOBHm_Chr4g0387111 RchiOBHm_Chr4g0402531 |
| rosa_laevigata | RLG00000000633 RLG00000003072 RLG00000011416 RLG00000019029 RLG00000026076 RLG00000036164 |
| rosa_multiflora | Rmu_co8181938.1_g000002 Rmu_co8182286.1_g000002 Rmu_sc0000103.1_g000012 Rmu_sc0001207.1_g000051 Rmu_sc0003615.1_g000003 Rmu_sc0004695.1_g000012 Rmu_sc0006098.1_g000005 Rmu_sc0007104.1_g000004 Rmu_sc0022560.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00249830 Rroxscaffold_3G00250680 Rroxscaffold_4G00290730 Rroxscaffold_4G00291010 Rroxscaffold_5G00369410 Rroxscaffold_7G00179280 |
| rosa_rugosa | Rorug07G0054300 |
| rosa_samantha | Rh1BG312100 Rh1CG327200 Rh1DG343700 Rh3BG375900 Rh5BG126700 Rh7AG071200 Rh7DG076500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 113 |
| AcsI | RAATTY | 1 cut(s) | 260 |
| AfaI | GTAC | 1 cut(s) | 338 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 73, 98, 295 |
| AgsI | TTSAA | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 113 |
| ApoI | RAATTY | 1 cut(s) | 260 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 127, 159 |
| AsuHPI | GGTGA | 2 cut(s) | 248, 278 |
| BccI | CCATC | 2 cut(s) | 75, 179 |
| BfaI | CTAG | 1 cut(s) | 198 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmsI | GCATC | 1 cut(s) | 312 |
| Bsa29I | ATCGAT | 1 cut(s) | 307 |
| BsaWI | WCCGGW | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 73, 98, 295 |
| BseCI | ATCGAT | 1 cut(s) | 307 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 73, 98, 295 |
| BshVI | ATCGAT | 1 cut(s) | 307 |
| BsiSI | CCGG | 1 cut(s) | 74 |
| BsiWI | CGTACG | 1 cut(s) | 336 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 73, 98, 295 |
| Bsp143I | GATC | 3 cut(s) | 105, 304, 308 |
| BspDI | ATCGAT | 1 cut(s) | 307 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspPI | GGATC | 1 cut(s) | 113 |
| BssMI | GATC | 3 cut(s) | 105, 304, 308 |
| Bst4CI | ACNGT | 3 cut(s) | 176, 194, 219 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstEII | GGTNACC | 1 cut(s) | 284 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 3 cut(s) | 108, 307, 311 |
| BstMBI | GATC | 3 cut(s) | 105, 304, 308 |
| BstPI | GGTNACC | 1 cut(s) | 284 |
| BstX2I | RGATCY | 1 cut(s) | 105 |
| BstYI | RGATCY | 1 cut(s) | 105 |
| Bsu15I | ATCGAT | 1 cut(s) | 307 |
| BsuTUI | ATCGAT | 1 cut(s) | 307 |
| BtgZI | GCGATG | 1 cut(s) | 198 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsI | GCAGTG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 2 cut(s) | 199, 253 |
| ClaI | ATCGAT | 1 cut(s) | 307 |
| Csp6I | GTAC | 1 cut(s) | 337 |
| CviJI | RGCY | 3 cut(s) | 91, 125, 149 |
| CviKI_1 | RGCY | 3 cut(s) | 91, 125, 149 |
| CviQI | GTAC | 1 cut(s) | 337 |
| DpnI | GATC | 3 cut(s) | 107, 306, 310 |
| DpnII | GATC | 3 cut(s) | 105, 304, 308 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| Eco91I | GGTNACC | 1 cut(s) | 284 |
| EcoO65I | GGTNACC | 1 cut(s) | 284 |
| FaiI | YATR | 5 cut(s) | 53, 122, 215, 222, 320 |
| FokI | GGATG | 1 cut(s) | 54 |
| FspBI | CTAG | 1 cut(s) | 198 |
| HapII | CCGG | 1 cut(s) | 74 |
| HinfI | GANTC | 1 cut(s) | 136 |
| HpaII | CCGG | 1 cut(s) | 74 |
| HphI | GGTGA | 2 cut(s) | 248, 278 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 141 |
| Hpy188III | TCNNGA | 2 cut(s) | 16, 312 |
| HpyCH4III | ACNGT | 3 cut(s) | 176, 194, 219 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 113 |
| Kzo9I | GATC | 3 cut(s) | 105, 304, 308 |
| LpnPI | CCDG | 3 cut(s) | 87, 99, 297 |
| LweI | GCATC | 1 cut(s) | 312 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeIII | GTNAC | 2 cut(s) | 271, 284 |
| MalI | GATC | 3 cut(s) | 107, 306, 310 |
| MboI | GATC | 3 cut(s) | 105, 304, 308 |
| MboII | GAAGA | 2 cut(s) | 68, 269 |
| MflI | RGATCY | 1 cut(s) | 105 |
| MluCI | AATT | 2 cut(s) | 260, 292 |
| MlyI | GAGTC | 1 cut(s) | 130 |
| MnlI | CCTC | 4 cut(s) | 52, 102, 163, 232 |
| MseI | TTAA | 2 cut(s) | 168, 346 |
| MspI | CCGG | 1 cut(s) | 74 |
| NdeII | GATC | 3 cut(s) | 105, 304, 308 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmuCI | GTSAC | 1 cut(s) | 284 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 180 |
| Pfl23II | CGTACG | 1 cut(s) | 336 |
| PleI | GAGTC | 1 cut(s) | 130 |
| PpsI | GAGTC | 1 cut(s) | 130 |
| PspEI | GGTNACC | 1 cut(s) | 284 |
| PspLI | CGTACG | 1 cut(s) | 336 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PsuI | RGATCY | 1 cut(s) | 105 |
| RsaI | GTAC | 1 cut(s) | 338 |
| RsaNI | GTAC | 1 cut(s) | 337 |
| SaqAI | TTAA | 2 cut(s) | 168, 346 |
| Sau3AI | GATC | 3 cut(s) | 105, 304, 308 |
| SchI | GAGTC | 1 cut(s) | 130 |
| SetI | ASST | 3 cut(s) | 12, 30, 133 |
| SfaNI | GCATC | 1 cut(s) | 312 |
| SgeI | CNNG | 9 cut(s) | 28, 37, 45, 86, 98, 166, 210, 324, 338 |
| SmlI | CTYRAG | 1 cut(s) | 14 |
| SmoI | CTYRAG | 1 cut(s) | 14 |
| Sse9I | AATT | 2 cut(s) | 260, 292 |
| SspMI | CTAG | 1 cut(s) | 198 |
| TaaI | ACNGT | 3 cut(s) | 176, 194, 219 |
| TaqI | TCGA | 2 cut(s) | 155, 307 |
| TasI | AATT | 2 cut(s) | 260, 292 |
| Tru1I | TTAA | 2 cut(s) | 168, 346 |
| Tru9I | TTAA | 2 cut(s) | 168, 346 |
| TscAI | CASTG | 2 cut(s) | 199, 253 |
| TseFI | GTSAC | 1 cut(s) | 284 |
| Tsp45I | GTSAC | 1 cut(s) | 284 |
| TspDTI | ATGAA | 2 cut(s) | 222, 243 |
| TspRI | CASTG | 2 cut(s) | 199, 253 |
| XapI | RAATTY | 1 cut(s) | 260 |
| XspI | CTAG | 1 cut(s) | 198 |