Transferase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transferase | PF02458 | 21 - 433 | 3.7e-31 | Transferase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 393 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 332 |
| Acc36I | ACCTGC | 1 cut(s) | 548 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1217 |
| AccI | GTMKAC | 1 cut(s) | 147 |
| AciI | CCGC | 2 cut(s) | 31, 297 |
| AclWI | GGATC | 1 cut(s) | 252 |
| AcoI | YGGCCR | 1 cut(s) | 348 |
| AcsI | RAATTY | 4 cut(s) | 875, 890, 1081, 1096 |
| AcuI | CTGAAG | 2 cut(s) | 753, 1041 |
| AcvI | CACGTG | 1 cut(s) | 285 |
| AdeI | CACNNNGTG | 1 cut(s) | 407 |
| AfaI | GTAC | 3 cut(s) | 627, 792, 868 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 73, 1170, 1217 |
| AflIII | ACRYGT | 2 cut(s) | 284, 537 |
| AgeI | ACCGGT | 1 cut(s) | 80 |
| AgsI | TTSAA | 7 cut(s) | 157, 196, 788, 988, 1019, 1127, 1132 |
| AjnI | CCWGG | 1 cut(s) | 1204 |
| AluBI | AGCT | 8 cut(s) | 100, 127, 489, 613, 956, 979, 1291, 1303 |
| AluI | AGCT | 8 cut(s) | 100, 127, 489, 613, 956, 979, 1291, 1303 |
| Alw21I | GWGCWC | 3 cut(s) | 926, 981, 1305 |
| Alw26I | GTCTC | 4 cut(s) | 43, 781, 903, 1034 |
| AlwI | GGATC | 1 cut(s) | 252 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 956 |
| Ama87I | CYCGRG | 1 cut(s) | 67 |
| AoxI | GGCC | 5 cut(s) | 268, 272, 348, 596, 1208 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| ApoI | RAATTY | 4 cut(s) | 875, 890, 1081, 1096 |
| AsiGI | ACCGGT | 1 cut(s) | 80 |
| AspS9I | GGNCC | 3 cut(s) | 91, 268, 1208 |
| AsuC2I | CCSGG | 2 cut(s) | 68, 69 |
| AsuHPI | GGTGA | 5 cut(s) | 88, 419, 868, 1190, 1256 |
| AvaI | CYCGRG | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 91 |
| BalI | TGGCCA | 1 cut(s) | 350 |
| BanII | GRGCYC | 2 cut(s) | 981, 1305 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 116, 148 |
| BauI | CACGAG | 1 cut(s) | 847 |
| BbrPI | CACGTG | 1 cut(s) | 285 |
| BbsI | GAAGAC | 2 cut(s) | 554, 716 |
| Bbv12I | GWGCWC | 3 cut(s) | 926, 981, 1305 |
| BbvCI | CCTCAGC | 1 cut(s) | 957 |
| BbvI | GCAGC | 1 cut(s) | 20 |
| BccI | CCATC | 4 cut(s) | 374, 847, 907, 1021 |
| BceAI | ACGGC | 1 cut(s) | 310 |
| BciT130I | CCWGG | 1 cut(s) | 1206 |
| BcnI | CCSGG | 2 cut(s) | 68, 69 |
| BcoDI | GTCTC | 4 cut(s) | 43, 781, 903, 1034 |
| BfuAI | ACCTGC | 1 cut(s) | 548 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| BmcAI | AGTACT | 2 cut(s) | 627, 792 |
| Bme1390I | CCNGG | 3 cut(s) | 68, 69, 1206 |
| Bme18I | GGWCC | 1 cut(s) | 91 |
| BmeT110I | CYCGRG | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 3 cut(s) | 91, 268, 1208 |
| BmrFI | CCNGG | 3 cut(s) | 68, 69, 1206 |
| BmrI | ACTGGG | 1 cut(s) | 1053 |
| BmsI | GCATC | 2 cut(s) | 154, 499 |
| BmuI | ACTGGG | 1 cut(s) | 1053 |
| BoxI | GACNNNNGTC | 1 cut(s) | 55 |
| BpiI | GAAGAC | 2 cut(s) | 554, 716 |
| Bpu10I | CCTNAGC | 1 cut(s) | 957 |
| BpuEI | CTTGAG | 1 cut(s) | 20 |
| BpuMI | CCSGG | 2 cut(s) | 68, 69 |
| Bsa29I | ATCGAT | 1 cut(s) | 1249 |
| BsaAI | YACGTR | 2 cut(s) | 285, 565 |
| BsaI | GGTCTC | 1 cut(s) | 781 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 67, 351, 552, 633, 771, 1205 |
| BsaWI | WCCGGW | 1 cut(s) | 80 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1221, 1251 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 73, 1170, 1217 |
| Bse118I | RCCGGY | 2 cut(s) | 80, 270 |
| Bse1I | ACTGG | 4 cut(s) | 418, 599, 1048, 1145 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| BseBI | CCWGG | 1 cut(s) | 1206 |
| BseCI | ATCGAT | 1 cut(s) | 1249 |
| BseDI | CCNNGG | 7 cut(s) | 66, 67, 351, 552, 633, 771, 1205 |
| BseGI | GGATG | 3 cut(s) | 370, 858, 918 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 73, 1170, 1217 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BseMII | CTCAG | 4 cut(s) | 771, 792, 948, 1029 |
| BseNI | ACTGG | 4 cut(s) | 418, 599, 1048, 1145 |
| BseXI | GCAGC | 1 cut(s) | 20 |
| BseYI | CCCAGC | 1 cut(s) | 489 |
| Bsh1285I | CGRYCG | 2 cut(s) | 85, 336 |
| BshFI | GGCC | 5 cut(s) | 270, 274, 350, 598, 1210 |
| BshTI | ACCGGT | 1 cut(s) | 80 |
| BshVI | ATCGAT | 1 cut(s) | 1249 |
| BsiEI | CGRYCG | 2 cut(s) | 85, 336 |
| BsiHKAI | GWGCWC | 3 cut(s) | 926, 981, 1305 |
| BsiHKCI | CYCGRG | 1 cut(s) | 67 |
| BsiSI | CCGG | 3 cut(s) | 68, 81, 271 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 73, 1170, 1217 |
| BsmAI | GTCTC | 4 cut(s) | 43, 781, 903, 1034 |
| BsnI | GGCC | 5 cut(s) | 270, 274, 350, 598, 1210 |
| Bso31I | GGTCTC | 1 cut(s) | 781 |
| BsoBI | CYCGRG | 1 cut(s) | 67 |
| Bsp1286I | GDGCHC | 3 cut(s) | 926, 981, 1305 |
| Bsp1407I | TGTACA | 1 cut(s) | 866 |
| Bsp143I | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| Bsp19I | CCATGG | 2 cut(s) | 351, 552 |
| BspACI | CCGC | 2 cut(s) | 31, 297 |
| BspANI | GGCC | 5 cut(s) | 270, 274, 350, 598, 1210 |
| BspCNI | CTCAG | 4 cut(s) | 770, 791, 949, 1030 |
| BspDI | ATCGAT | 1 cut(s) | 1249 |
| BspMI | ACCTGC | 1 cut(s) | 548 |
| BspPI | GGATC | 1 cut(s) | 252 |
| BspTNI | GGTCTC | 1 cut(s) | 781 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BsrFI | RCCGGY | 2 cut(s) | 80, 270 |
| BsrGI | TGTACA | 1 cut(s) | 866 |
| BsrI | ACTGG | 4 cut(s) | 418, 599, 1048, 1145 |
| BssAI | RCCGGY | 2 cut(s) | 80, 270 |
| BssECI | CCNNGG | 7 cut(s) | 66, 67, 351, 552, 633, 771, 1205 |
| BssMI | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| BssSI | CACGAG | 1 cut(s) | 847 |
| BssT1I | CCWWGG | 4 cut(s) | 351, 552, 633, 771 |
| Bst2BI | CACGAG | 1 cut(s) | 847 |
| Bst2UI | CCWGG | 1 cut(s) | 1206 |
| Bst4CI | ACNGT | 8 cut(s) | 54, 76, 161, 184, 334, 447, 928, 1261 |
| Bst6I | CTCTTC | 1 cut(s) | 1014 |
| BstAUI | TGTACA | 1 cut(s) | 866 |
| BstBAI | YACGTR | 2 cut(s) | 285, 565 |
| BstC8I | GCNNGC | 2 cut(s) | 272, 600 |
| BstDEI | CTNAG | 6 cut(s) | 609, 757, 778, 957, 1038, 1195 |
| BstDSI | CCRYGG | 2 cut(s) | 351, 552 |
| BstEII | GGTNACC | 1 cut(s) | 76 |
| BstF5I | GGATG | 3 cut(s) | 370, 858, 918 |
| BstKTI | GATC | 4 cut(s) | 260, 828, 1249, 1253 |
| BstMAI | GTCTC | 4 cut(s) | 43, 781, 903, 1034 |
| BstMBI | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| BstMCI | CGRYCG | 2 cut(s) | 85, 336 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 518, 1076, 1207, 1317 |
| BstNI | CCWGG | 1 cut(s) | 1206 |
| BstNSI | RCATGY | 1 cut(s) | 541 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 55 |
| BstPI | GGTNACC | 1 cut(s) | 76 |
| BstSCI | CCNGG | 3 cut(s) | 66, 67, 1204 |
| BstV1I | GCAGC | 1 cut(s) | 20 |
| BstV2I | GAAGAC | 2 cut(s) | 554, 716 |
| BstX2I | RGATCY | 1 cut(s) | 257 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 358 |
| BstYI | RGATCY | 1 cut(s) | 257 |
| Bsu15I | ATCGAT | 1 cut(s) | 1249 |
| BsuRI | GGCC | 5 cut(s) | 270, 274, 350, 598, 1210 |
| BsuTUI | ATCGAT | 1 cut(s) | 1249 |
| BtgI | CCRYGG | 2 cut(s) | 351, 552 |
| BtsCI | GGATG | 3 cut(s) | 370, 858, 918 |
| BtsIMutI | CAGTG | 3 cut(s) | 166, 483, 886 |
| BveI | ACCTGC | 1 cut(s) | 548 |
| Cac8I | GCNNGC | 2 cut(s) | 272, 600 |
| CaiI | CAGNNNCTG | 1 cut(s) | 956 |
| Cfr10I | RCCGGY | 2 cut(s) | 80, 270 |
| Cfr13I | GGNCC | 3 cut(s) | 91, 268, 1208 |
| Cfr9I | CCCGGG | 1 cut(s) | 67 |
| ClaI | ATCGAT | 1 cut(s) | 1249 |
| Csp6I | GTAC | 3 cut(s) | 626, 791, 867 |
| CspAI | ACCGGT | 1 cut(s) | 80 |
| CviAII | CATG | 7 cut(s) | 46, 95, 352, 538, 553, 725, 1012 |
| CviQI | GTAC | 3 cut(s) | 626, 791, 867 |
| DdeI | CTNAG | 6 cut(s) | 609, 757, 778, 957, 1038, 1195 |
| DpnI | GATC | 4 cut(s) | 259, 827, 1248, 1252 |
| DpnII | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| DraI | TTTAAA | 1 cut(s) | 460 |
| DraIII | CACNNNGTG | 1 cut(s) | 407 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 332 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 332 |
| EaeI | YGGCCR | 1 cut(s) | 348 |
| Eam1104I | CTCTTC | 1 cut(s) | 1014 |
| EarI | CTCTTC | 1 cut(s) | 1014 |
| Ecl136II | GAGCTC | 2 cut(s) | 979, 1303 |
| Eco130I | CCWWGG | 4 cut(s) | 351, 552, 633, 771 |
| Eco24I | GRGCYC | 2 cut(s) | 981, 1305 |
| Eco31I | GGTCTC | 1 cut(s) | 781 |
| Eco47I | GGWCC | 1 cut(s) | 91 |
| Eco53kI | GAGCTC | 2 cut(s) | 979, 1303 |
| Eco57I | CTGAAG | 2 cut(s) | 753, 1041 |
| Eco72I | CACGTG | 1 cut(s) | 285 |
| Eco88I | CYCGRG | 1 cut(s) | 67 |
| Eco91I | GGTNACC | 1 cut(s) | 76 |
| EcoICRI | GAGCTC | 2 cut(s) | 979, 1303 |
| EcoO65I | GGTNACC | 1 cut(s) | 76 |
| EcoRII | CCWGG | 1 cut(s) | 1204 |
| EcoT14I | CCWWGG | 4 cut(s) | 351, 552, 633, 771 |
| EcoT22I | ATGCAT | 1 cut(s) | 514 |
| EcoT38I | GRGCYC | 2 cut(s) | 981, 1305 |
| ErhI | CCWWGG | 4 cut(s) | 351, 552, 633, 771 |
| FaeI | CATG | 7 cut(s) | 49, 98, 355, 541, 556, 728, 1015 |
| FatI | CATG | 7 cut(s) | 45, 94, 351, 537, 552, 724, 1011 |
| FauNDI | CATATG | 2 cut(s) | 806, 1072 |
| FblI | GTMKAC | 1 cut(s) | 147 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 3 cut(s) | 377, 865, 925 |
| FriOI | GRGCYC | 2 cut(s) | 981, 1305 |
| FseI | GGCCGGCC | 1 cut(s) | 274 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| GluI | GCNGC | 1 cut(s) | 9 |
| GsaI | CCCAGC | 1 cut(s) | 493 |
| HaeIII | GGCC | 5 cut(s) | 270, 274, 350, 598, 1210 |
| HapII | CCGG | 3 cut(s) | 68, 81, 271 |
| Hin1II | CATG | 7 cut(s) | 49, 98, 355, 541, 556, 728, 1015 |
| HinfI | GANTC | 5 cut(s) | 249, 368, 665, 859, 896 |
| HpaII | CCGG | 3 cut(s) | 68, 81, 271 |
| HphI | GGTGA | 5 cut(s) | 88, 419, 868, 1190, 1256 |
| Hpy166II | GTNNAC | 4 cut(s) | 28, 112, 148, 450 |
| Hpy188I | TCNGA | 5 cut(s) | 87, 254, 262, 967, 1060 |
| Hpy188III | TCNNGA | 4 cut(s) | 419, 590, 731, 1124 |
| Hpy8I | GTNNAC | 4 cut(s) | 28, 112, 148, 450 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 296 |
| HpyAV | CCTTC | 5 cut(s) | 82, 538, 1126, 1178, 1226 |
| HpyCH4III | ACNGT | 8 cut(s) | 54, 76, 161, 184, 334, 447, 928, 1261 |
| HpyCH4IV | ACGT | 5 cut(s) | 24, 108, 284, 564, 585 |
| HpyCH4V | TGCA | 7 cut(s) | 167, 512, 583, 602, 702, 800, 1154 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 518, 1076, 1207, 1317 |
| HpyF3I | CTNAG | 6 cut(s) | 609, 757, 778, 957, 1038, 1195 |
| HpySE526I | ACGT | 5 cut(s) | 24, 108, 284, 564, 585 |
| Hsp92II | CATG | 7 cut(s) | 49, 98, 355, 541, 556, 728, 1015 |
| KroI | GCCGGC | 1 cut(s) | 270 |
| KroNI | GCCGGC | 1 cut(s) | 272 |
| Kzo9I | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| LmnI | GCTCC | 4 cut(s) | 225, 618, 921, 1317 |
| Lsp1109I | GCAGC | 1 cut(s) | 20 |
| LweI | GCATC | 2 cut(s) | 154, 499 |
| MaeII | ACGT | 5 cut(s) | 24, 108, 284, 564, 585 |
| MaeIII | GTNAC | 7 cut(s) | 76, 287, 323, 560, 637, 856, 1255 |
| MalI | GATC | 4 cut(s) | 259, 827, 1248, 1252 |
| MboI | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| MboII | GAAGA | 7 cut(s) | 208, 267, 559, 721, 1010, 1031, 1047 |
| MfeI | CAATTG | 2 cut(s) | 1280, 1312 |
| MflI | RGATCY | 1 cut(s) | 257 |
| MhlI | GDGCHC | 3 cut(s) | 926, 981, 1305 |
| MlsI | TGGCCA | 1 cut(s) | 350 |
| MluNI | TGGCCA | 1 cut(s) | 350 |
| MlyI | GAGTC | 2 cut(s) | 853, 905 |
| MmeI | TCCRAC | 1 cut(s) | 65 |
| MnlI | CCTC | 9 cut(s) | 44, 250, 307, 355, 461, 532, 843, 952, 1219 |
| Mox20I | TGGCCA | 1 cut(s) | 350 |
| Mph1103I | ATGCAT | 1 cut(s) | 514 |
| MroNI | GCCGGC | 1 cut(s) | 270 |
| MscI | TGGCCA | 1 cut(s) | 350 |
| MseI | TTAA | 5 cut(s) | 459, 654, 744, 930, 1239 |
| MslI | CAYNNNNRTG | 3 cut(s) | 356, 536, 851 |
| Msp20I | TGGCCA | 1 cut(s) | 350 |
| MspA1I | CMGCKG | 1 cut(s) | 1291 |
| MspI | CCGG | 3 cut(s) | 68, 81, 271 |
| MspR9I | CCNGG | 3 cut(s) | 68, 69, 1206 |
| MunI | CAATTG | 2 cut(s) | 1280, 1312 |
| MvaI | CCWGG | 1 cut(s) | 1206 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 518, 1076, 1207, 1317 |
| NaeI | GCCGGC | 1 cut(s) | 272 |
| NciI | CCSGG | 2 cut(s) | 68, 69 |
| NcoI | CCATGG | 2 cut(s) | 351, 552 |
| NdeI | CATATG | 2 cut(s) | 806, 1072 |
| NdeII | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| NgoMIV | GCCGGC | 1 cut(s) | 270 |
| NlaIII | CATG | 7 cut(s) | 49, 98, 355, 541, 556, 728, 1015 |
| NmuCI | GTSAC | 4 cut(s) | 76, 323, 856, 1255 |
| NsiI | ATGCAT | 1 cut(s) | 514 |
| NspI | RCATGY | 1 cut(s) | 541 |
| PciI | ACATGT | 1 cut(s) | 537 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 333 |
| PdiI | GCCGGC | 1 cut(s) | 272 |
| PfeI | GAWTC | 3 cut(s) | 249, 368, 665 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1217 |
| PinAI | ACCGGT | 1 cut(s) | 80 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PleI | GAGTC | 2 cut(s) | 853, 904 |
| PmaCI | CACGTG | 1 cut(s) | 285 |
| PmlI | CACGTG | 1 cut(s) | 285 |
| PpsI | GAGTC | 2 cut(s) | 853, 904 |
| Ppu21I | YACGTR | 2 cut(s) | 285, 565 |
| PscI | ACATGT | 1 cut(s) | 537 |
| PshAI | GACNNNNGTC | 1 cut(s) | 55 |
| PsiI | TTATAA | 1 cut(s) | 393 |
| Psp124BI | GAGCTC | 2 cut(s) | 981, 1305 |
| Psp6I | CCWGG | 1 cut(s) | 1204 |
| PspCI | CACGTG | 1 cut(s) | 285 |
| PspEI | GGTNACC | 1 cut(s) | 76 |
| PspFI | CCCAGC | 1 cut(s) | 489 |
| PspGI | CCWGG | 1 cut(s) | 1204 |
| PspPI | GGNCC | 3 cut(s) | 91, 268, 1208 |
| PstNI | CAGNNNCTG | 1 cut(s) | 956 |
| PsuI | RGATCY | 1 cut(s) | 257 |
| PvuII | CAGCTG | 1 cut(s) | 1291 |
| RigI | GGCCGGCC | 1 cut(s) | 274 |
| RsaI | GTAC | 3 cut(s) | 627, 792, 868 |
| RsaNI | GTAC | 3 cut(s) | 626, 791, 867 |
| RseI | CAYNNNNRTG | 3 cut(s) | 356, 536, 851 |
| SacI | GAGCTC | 2 cut(s) | 981, 1305 |
| SaqAI | TTAA | 5 cut(s) | 459, 654, 744, 930, 1239 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau3AI | GATC | 4 cut(s) | 257, 825, 1246, 1250 |
| Sau96I | GGNCC | 3 cut(s) | 91, 268, 1208 |
| ScaI | AGTACT | 2 cut(s) | 627, 792 |
| SchI | GAGTC | 2 cut(s) | 853, 905 |
| ScrFI | CCNGG | 3 cut(s) | 68, 69, 1206 |
| SduI | GDGCHC | 3 cut(s) | 926, 981, 1305 |
| SfaNI | GCATC | 2 cut(s) | 154, 499 |
| SinI | GGWCC | 1 cut(s) | 91 |
| SmaI | CCCGGG | 1 cut(s) | 69 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 356, 536, 851 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| SsiI | CCGC | 2 cut(s) | 31, 297 |
| SstI | GAGCTC | 2 cut(s) | 981, 1305 |
| StyD4I | CCNGG | 3 cut(s) | 66, 67, 1204 |
| StyI | CCWWGG | 4 cut(s) | 351, 552, 633, 771 |
| TaaI | ACNGT | 8 cut(s) | 54, 76, 161, 184, 334, 447, 928, 1261 |
| TaiI | ACGT | 5 cut(s) | 27, 111, 287, 567, 588 |
| TaqI | TCGA | 2 cut(s) | 336, 1249 |
| TatI | WGTACW | 3 cut(s) | 625, 790, 866 |
| TfiI | GAWTC | 3 cut(s) | 249, 368, 665 |
| Tru1I | TTAA | 5 cut(s) | 459, 654, 744, 930, 1239 |
| Tru9I | TTAA | 5 cut(s) | 459, 654, 744, 930, 1239 |
| TscAI | CASTG | 3 cut(s) | 166, 483, 886 |
| TseFI | GTSAC | 4 cut(s) | 76, 323, 856, 1255 |
| TseI | GCWGC | 1 cut(s) | 8 |
| Tsp45I | GTSAC | 4 cut(s) | 76, 323, 856, 1255 |
| TspDTI | ATGAA | 8 cut(s) | 137, 268, 354, 520, 713, 722, 1017, 1197 |
| TspGWI | ACGGA | 1 cut(s) | 49 |
| TspMI | CCCGGG | 1 cut(s) | 67 |
| TspRI | CASTG | 3 cut(s) | 166, 483, 886 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1217 |
| VpaK11BI | GGWCC | 1 cut(s) | 91 |
| XapI | RAATTY | 4 cut(s) | 875, 890, 1081, 1096 |
| XceI | RCATGY | 1 cut(s) | 541 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 112 |
| XmaI | CCCGGG | 1 cut(s) | 67 |
| XmiI | GTMKAC | 1 cut(s) | 147 |
| ZrmI | AGTACT | 2 cut(s) | 627, 792 |
| Zsp2I | ATGCAT | 1 cut(s) | 514 |