Rorug07G0275200

21 kDa protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000453
Physical Location & Seq
Reverse (-)
26272567 .. 26278230
5664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0275200.1

Sequence Viewer

Length: 1626 bp
ATGGGATCGAGCGGCAGCAAAGCCACGTCGTCGTCGTCCGGCGATACTGGTCGGAGGCGGCGATCCAAATCCATCGCCGGCAGAGTGTTCCGCTCGTCTTGTCTCGGAATCAAATCTCGATCTCGCCACGCCGACGATGACGAGCAGGTCTGTGAACATCGGAACAAAGGAAGTAGAATTATTGCTCCTTGTACAAACCAGACCGTCACAGAGCAGGATCGTGCAAAGGAGTATTTCGGAAAGGTTAACATTGAACAATCTGATGAAATGCCTTGTATATCTTCAAACGCTGAACTCAATGAATGGGGTGATGCTAGCATCACTGATACTGTCTCCAGAACTGGTCCCGGCTCTGCTCAAGATTCTGCTGCTCCATCTTTGAATCCCTCAAGTCGTTTCCTTTCCCGTTTTAGTTTTGTTCCTGGCAATGTAAGCTTCAGGCTAAGCCGAGCAACCAGTTTGGGGTCAGCCGGGTCTTATCCTGTATCATCAACAAGTGTCACAGTATTGAATAATGATGACCTACATCTGCAAACGGGACCTTCTACCAGTTTGGTTGGTAGAGATGAAAGTCGAGAAGGTTGTGAATTTCTTCCAGAATCACTGGTTAATAGGACTCCTACACATTTTTTTGAAGACACTTCTGGTAGTTTAGGATTAAATAATGTGGAATCTGGTTTTTCTGACAATTTGCAAGATAATCAGACAAATTCTTCTATACAAGATGGCAGAAATGCTAATGGTAGAATAATAGGGGTACTTAACAGATACCCAGGATCTCAGGAACCTGTAGAACGAAATGTTCGTTTTAGCAGAACCTTAAGTGTTGGGAGACTTCGTGACAGGGTTCTTCGTCGATCATCTTTGTCTGATTTAGCATTTTCTTCTTTGCAACAAGAGGGAGAAGTGAGAGATACAAATCAGGGGGATGATACAGGGACATTGGCACCTGAAAGTAGTGTTGTAAATTTGCAAAATGGGTCTGGTTATCCTGCATCCAATATGTCGAATTCATTGTTTAGCAACCAAGACTATGAGGCGGAAACAATAAGACCTCGAGAAGCCAGGTATCATGATCTACTCGAACACAGATCAAATTTCCTCGAGCGGAGGAGAAGAATTAGATCTCAGGTTCGTGCACTTCAGCGGTTAGGGAGCCGTTTTGAAAATGTGTCTGGACATGAGAGGTCTTGTATATTATCTGGTCAGCAGAGAACCGGTCGGTGTACATGTCGTTCAAGTAACCGAGATGCCCATCCAAATGATAACAGCAGTGCTAGGGCAAGCATATCCCGAATTGTTATGTTGGCTGAGGCTTTGTTTGAGCAATCTGTGGTTTTATCCTCCCGACCTTCTGTTTCTTCAATTGGATCTGTTCCTGCACCTAATGAAGTTGTAGAATCTTTGCCTGTCAAATTATTTTCCAAGTTGCAAAAACATCAGCATGAAGAGGCTGCGCAATGCTACATATGCCTTGTGGAGTATGAAGAAGGAGATGAAATGCGGATACTGCCTTGTAATCATGAATTTCATAAAGCTTGTATTGACAAGTGGCTCAAGGAGATTCACAGGGTATGCCCACTTTGTCGCCGGGATATCTGCAGATCGACCTCTGAAGAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMEI

Protein Analysis

541

Amino Acids

59.85

Weight (kDa)

7.18

Isoelectric Point (pI)

61.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 487 - 530 1.3e-13 Ring finger domain
zf-RING_11 PF17123 487 - 515 3.8e-10 RING-like zinc finger
zf-rbx1 PF12678 487 - 530 2.1e-08 RING-H2 zinc finger domain
zf-C3HC4_2 PF13923 487 - 529 1.8e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 488 - 529 9.9e-09 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000453)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24510
fragaria_vesca FvH4_5g34840 FvH4_5g34850
malus_domestica MD08G1199200.v1.1 MD08G1199300.v1.1 MD15G1386300.v1.1 MD15G1386800.v1.1
prunus_persica Prupe.1G533000_v2.0.a1
pyrus_communis pycom08g17310 pycom15g34640 pycom15g34680
rosa_chinensis RchiOBHm_Chr1g0364531 RchiOBHm_Chr4g0415781 RchiOBHm_Chr7g0232591 RchiOBHm_Chr7g0235521 RchiOBHm_Chr7g0235551 RchiOBHm_Chr7g0235561 RchiOBHm_Chr7g0235611 RchiOBHm_Chr7g0235721 RchiOBHm_Chr7g0235771
rosa_laevigata RLG00000001141 RLG00000001147 RLG00000001148 RLG00000001151 RLG00000001152 RLG00000001321 RLG00000029743
rosa_multiflora Rmu_co8320053.1_g000001 Rmu_co8402261.1_g000001 Rmu_co8447535.1_g000001 Rmu_sc0001912.1_g000001 Rmu_sc0001912.1_g000003 Rmu_sc0002617.1_g000016 Rmu_sc0002617.1_g000017 Rmu_sc0002892.1_g000022 Rmu_sc0002892.1_g000023 Rmu_sc0002892.1_g000041 Rmu_sc0002892.1_g000042 Rmu_sc0007994.1_g000006 Rmu_sc0010963.1_g000008 Rmu_sc0011151.1_g000005 Rmu_sc0012467.1_g000003 Rmu_ssc0000471.1_g000012 Rmu_ssc0000471.1_g000013
rosa_roxburghii Rroxscaffold_3G00225680 Rroxscaffold_3G00225800 Rroxscaffold_3G00225870 Rroxscaffold_3G00228130 Rroxscaffold_6G00391050
rosa_rugosa Rorug07G0275200 Rorug07G0291500.1 Rorug07G0292000 Rorug07G0292200 Rorug07G0292500 Rorug07G0295900
rosa_samantha Rh7AG430000 Rh7AG446600 Rh7AG446800 Rh7AG447200 Rh7AG447300 Rh7AG447500 Rh7BG403500 Rh7BG418300 Rh7BG418400 Rh7BG418800 Rh7BG419000 Rh7BG419100 Rh7BG419300 Rh7BG419400 Rh7BG419500 Rh7BG419700 Rh7CG448700 Rh7CG466600 Rh7CG467000 Rh7CG467200 Rh7CG467300 Rh7CG467400 Rh7CG467500 Rh7CG468000 Rh7DG419700 Rh7DG435300 Rh7DG435400 Rh7DG435500 Rh7DG435600 Rh7DG436000 Rh7DG436500
rosa_wichuraiana Rw0G011890 Rw7G035510 Rw7G037080 Rw7G037090 Rw7G037110 Rw7G037180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 146
Acc16I TGCGCA 1 cut(s) 1458
Acc36I ACCTGC 1 cut(s) 136
AccB1I GGYRCC 1 cut(s) 946
AccBSI CCGCTC 3 cut(s) 12, 93, 1108
AciI CCGC 7 cut(s) 12, 58, 91, 1040, 1108, 1147, 1504
AclWI GGATC 5 cut(s) 13, 57, 225, 784, 1378
AcsI RAATTY 6 cut(s) 587, 709, 967, 1009, 1096, 1526
AcuI CTGAAG 2 cut(s) 421, 1127
AfaI GTAC 3 cut(s) 193, 759, 1228
AfiI CCNNNNNNNGG 1 cut(s) 462
AflII CTTAAG 1 cut(s) 820
AflIII ACRYGT 1 cut(s) 1229
AgeI ACCGGT 1 cut(s) 1217
AgsI TTSAA 8 cut(s) 254, 285, 382, 511, 635, 1166, 1239, 1365
AjiI CACGTC 1 cut(s) 27
AjnI CCWGG 3 cut(s) 421, 772, 1064
AluBI AGCT 2 cut(s) 435, 1538
AluI AGCT 2 cut(s) 435, 1538
Alw21I GWGCWC 1 cut(s) 1141
Alw26I GTCTC 3 cut(s) 107, 337, 826
Alw44I GTGCAC 1 cut(s) 1137
AlwI GGATC 5 cut(s) 13, 57, 225, 784, 1378
Ama87I CYCGRG 2 cut(s) 1056, 1103
ApaLI GTGCAC 1 cut(s) 1137
ApeKI GCWGC 3 cut(s) 15, 368, 1454
ApoI RAATTY 6 cut(s) 587, 709, 967, 1009, 1096, 1526
AsiGI ACCGGT 1 cut(s) 1217
Asp700I GAANNNNTTC 1 cut(s) 591
AspLEI GCGC 1 cut(s) 1459
AspS9I GGNCC 2 cut(s) 344, 539
AsuC2I CCSGG 3 cut(s) 348, 472, 1592
AsuHPI GGTGA 1 cut(s) 320
AsuNHI GCTAGC 1 cut(s) 314
AvaI CYCGRG 2 cut(s) 1056, 1103
AvaII GGWCC 2 cut(s) 344, 539
BaeGI GKGCMC 1 cut(s) 1141
BanI GGYRCC 1 cut(s) 946
BbsI GAAGAC 1 cut(s) 642
Bbv12I GWGCWC 1 cut(s) 1141
BbvCI CCTCAGC 1 cut(s) 1311
BbvI GCAGC 3 cut(s) 27, 355, 1441
BccI CCATC 4 cut(s) 80, 382, 719, 1263
BceAI ACGGC 1 cut(s) 1143
BciT130I CCWGG 3 cut(s) 423, 774, 1066
BciVI GTATCC 1 cut(s) 1500
BcnI CCSGG 3 cut(s) 348, 472, 1592
BcoDI GTCTC 3 cut(s) 107, 337, 826
BfaI CTAG 2 cut(s) 315, 1278
BfmI CTRYAG 2 cut(s) 789, 1600
BfrI CTTAAG 1 cut(s) 820
BfuAI ACCTGC 1 cut(s) 136
BfuI GTATCC 1 cut(s) 1500
BglII AGATCT 1 cut(s) 1124
BisI GCNGC 5 cut(s) 13, 16, 59, 369, 1455
BlpI GCTNAGC 1 cut(s) 443
BlsI GCNGC 5 cut(s) 14, 17, 60, 370, 1456
Bme1390I CCNGG 6 cut(s) 348, 423, 472, 774, 1066, 1592
Bme18I GGWCC 2 cut(s) 344, 539
BmeT110I CYCGRG 2 cut(s) 1056, 1103
BmgBI CACGTC 1 cut(s) 27
BmgT120I GGNCC 2 cut(s) 344, 539
BmiI GGNNCC 5 cut(s) 346, 540, 786, 948, 1157
BmrFI CCNGG 6 cut(s) 348, 423, 472, 774, 1066, 1592
BmsI GCATC 4 cut(s) 301, 327, 1004, 1240
BmtI GCTAGC 1 cut(s) 318
BpiI GAAGAC 1 cut(s) 642
BpmI CTGGAG 1 cut(s) 319
Bpu10I CCTNAGC 1 cut(s) 1311
Bpu1102I GCTNAGC 1 cut(s) 443
BpuEI CTTGAG 3 cut(s) 342, 373, 1541
BpuMI CCSGG 3 cut(s) 348, 472, 1592
BsaBI GATNNNNATC 3 cut(s) 67, 918, 1254
BsaJI CCNNGG 1 cut(s) 772
BsaWI WCCGGW 1 cut(s) 1217
BsaXI ACNNNNNCTCC 2 cut(s) 823, 853
Bsc4I CCNNNNNNNGG 1 cut(s) 462
Bse118I RCCGGY 2 cut(s) 77, 1217
Bse1I ACTGG 5 cut(s) 52, 346, 456, 549, 609
Bse3DI GCAATG 2 cut(s) 433, 1466
Bse8I GATNNNNATC 3 cut(s) 67, 918, 1254
BseBI CCWGG 3 cut(s) 423, 774, 1066
BseDI CCNNGG 1 cut(s) 772
BseGI GGATG 3 cut(s) 934, 995, 1255
BseJI GATNNNNATC 3 cut(s) 67, 918, 1254
BseLI CCNNNNNNNGG 1 cut(s) 462
BseMI GCAATG 2 cut(s) 433, 1466
BseMII CTCAG 3 cut(s) 794, 1142, 1302
BseNI ACTGG 5 cut(s) 52, 346, 456, 549, 609
BseRI GAGGAG 1 cut(s) 1126
BseSI GKGCMC 1 cut(s) 1141
BseXI GCAGC 3 cut(s) 27, 355, 1441
BsgI GTGCAG 1 cut(s) 1365
Bsh1285I CGRYCG 1 cut(s) 1222
BshNI GGYRCC 1 cut(s) 946
BshTI ACCGGT 1 cut(s) 1217
BsiEI CGRYCG 1 cut(s) 1222
BsiHKAI GWGCWC 1 cut(s) 1141
BsiHKCI CYCGRG 2 cut(s) 1056, 1103
BsiSI CCGG 6 cut(s) 39, 78, 348, 471, 1218, 1591
BslFI GGGAC 3 cut(s) 330, 552, 952
BslI CCNNNNNNNGG 1 cut(s) 462
BsmAI GTCTC 3 cut(s) 107, 337, 826
BsmFI GGGAC 3 cut(s) 330, 552, 952
BsoBI CYCGRG 2 cut(s) 1056, 1103
Bsp1286I GDGCHC 1 cut(s) 1141
Bsp1407I TGTACA 2 cut(s) 191, 1226
Bsp1720I GCTNAGC 1 cut(s) 443
BspACI CCGC 7 cut(s) 12, 58, 91, 1040, 1108, 1147, 1504
BspCNI CTCAG 3 cut(s) 793, 1141, 1303
BspHI TCATGA 2 cut(s) 1072, 1522
BspLI GGNNCC 5 cut(s) 346, 540, 786, 948, 1157
BspMAI CTGCAG 1 cut(s) 1604
BspMI ACCTGC 1 cut(s) 136
BspOI GCTAGC 1 cut(s) 318
BspPI GGATC 5 cut(s) 13, 57, 225, 784, 1378
BspT107I GGYRCC 1 cut(s) 946
BspTI CTTAAG 1 cut(s) 820
BsrBI CCGCTC 3 cut(s) 12, 93, 1108
BsrDI GCAATG 2 cut(s) 433, 1466
BsrFI RCCGGY 2 cut(s) 77, 1217
BsrGI TGTACA 2 cut(s) 191, 1226
BsrI ACTGG 5 cut(s) 52, 346, 456, 549, 609
BssAI RCCGGY 2 cut(s) 77, 1217
BssECI CCNNGG 1 cut(s) 772
Bst2UI CCWGG 3 cut(s) 423, 774, 1066
Bst4CI ACNGT 3 cut(s) 205, 331, 505
Bst6I CTCTTC 2 cut(s) 1443, 1611
BstAFI CTTAAG 1 cut(s) 820
BstAUI TGTACA 2 cut(s) 191, 1226
BstC8I GCNNGC 3 cut(s) 79, 316, 1285
BstDEI CTNAG 4 cut(s) 443, 780, 1128, 1311
BstF5I GGATG 3 cut(s) 934, 995, 1255
BstHHI GCGC 1 cut(s) 1459
BstMAI GTCTC 3 cut(s) 107, 337, 826
BstMCI CGRYCG 1 cut(s) 1222
BstMWI GCNNNNNNNGC 3 cut(s) 432, 1470, 1510
BstNI CCWGG 3 cut(s) 423, 774, 1066
BstNSI RCATGY 1 cut(s) 1233
BstSCI CCNGG 6 cut(s) 346, 421, 470, 772, 1064, 1590
BstSFI CTRYAG 2 cut(s) 789, 1600
BstSLI GKGCMC 1 cut(s) 1141
BstV1I GCAGC 3 cut(s) 27, 355, 1441
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 3 cut(s) 776, 1124, 1370
BstYI RGATCY 3 cut(s) 776, 1124, 1370
BsuI GTATCC 1 cut(s) 1500
BtgZI GCGATG 1 cut(s) 58
BtrI CACGTC 1 cut(s) 27
BtsCI GGATG 3 cut(s) 934, 995, 1255
BtsI GCAGTG 1 cut(s) 1279
BtsIMutI CAGTG 3 cut(s) 321, 602, 1279
BveI ACCTGC 1 cut(s) 136
Cac8I GCNNGC 3 cut(s) 79, 316, 1285
CciI TCATGA 2 cut(s) 1072, 1522
CfoI GCGC 1 cut(s) 1459
Cfr10I RCCGGY 2 cut(s) 77, 1217
Cfr13I GGNCC 2 cut(s) 344, 539
Csp6I GTAC 3 cut(s) 192, 758, 1227
CspAI ACCGGT 1 cut(s) 1217
CviAII CATG 5 cut(s) 1073, 1181, 1230, 1445, 1523
CviQI GTAC 3 cut(s) 192, 758, 1227
DdeI CTNAG 4 cut(s) 443, 780, 1128, 1311
DrdI GACNNNNNNGTC 1 cut(s) 146
DseDI GACNNNNNNGTC 1 cut(s) 146
Eam1104I CTCTTC 2 cut(s) 1443, 1611
EarI CTCTTC 2 cut(s) 1443, 1611
EciI GGCGGA 1 cut(s) 1055
Eco32I GATATC 1 cut(s) 1597
Eco47I GGWCC 2 cut(s) 344, 539
Eco57I CTGAAG 2 cut(s) 421, 1127
Eco88I CYCGRG 2 cut(s) 1056, 1103
EcoO109I RGGNCCY 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 1009
EcoRII CCWGG 3 cut(s) 421, 772, 1064
EcoRV GATATC 1 cut(s) 1597
FaeI CATG 5 cut(s) 1076, 1184, 1233, 1448, 1526
FaqI GGGAC 3 cut(s) 330, 552, 952
FatI CATG 5 cut(s) 1072, 1180, 1229, 1444, 1522
FauNDI CATATG 1 cut(s) 1469
Fnu4HI GCNGC 5 cut(s) 13, 16, 59, 369, 1455
FokI GGATG 3 cut(s) 941, 982, 1242
Fsp4HI GCNGC 5 cut(s) 13, 16, 59, 369, 1455
FspBI CTAG 2 cut(s) 315, 1278
FspI TGCGCA 1 cut(s) 1458
GlaI GCGC 1 cut(s) 1458
GluI GCNGC 5 cut(s) 13, 16, 59, 369, 1455
GsuI CTGGAG 1 cut(s) 319
HapII CCGG 6 cut(s) 39, 78, 348, 471, 1218, 1591
HhaI GCGC 1 cut(s) 1459
Hin1II CATG 5 cut(s) 1076, 1184, 1233, 1448, 1526
Hin6I GCGC 1 cut(s) 1457
HinP1I GCGC 1 cut(s) 1457
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 2 cut(s) 433, 1536
HinfI GANTC 8 cut(s) 108, 362, 382, 599, 616, 671, 1400, 1564
HpaI GTTAAC 1 cut(s) 247
HpaII CCGG 6 cut(s) 39, 78, 348, 471, 1218, 1591
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 4 cut(s) 155, 247, 1139, 1227
Hpy188I TCNGA 9 cut(s) 54, 107, 162, 239, 262, 685, 705, 871, 1615
Hpy8I GTNNAC 4 cut(s) 155, 247, 1139, 1227
Hpy99I CGWCG 5 cut(s) 31, 34, 37, 137, 858
HpyAV CCTTC 4 cut(s) 552, 572, 1362, 1484
HpyCH4III ACNGT 3 cut(s) 205, 331, 505
HpyCH4IV ACGT 1 cut(s) 26
HpyF10VI GCNNNNNNNGC 3 cut(s) 432, 1470, 1510
HpyF3I CTNAG 4 cut(s) 443, 780, 1128, 1311
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 5 cut(s) 1076, 1184, 1233, 1448, 1526
HspAI GCGC 1 cut(s) 1457
KroI GCCGGC 1 cut(s) 77
KroNI GCCGGC 1 cut(s) 79
KspAI GTTAAC 1 cut(s) 247
LmnI GCTCC 3 cut(s) 190, 376, 1155
Lsp1109I GCAGC 3 cut(s) 27, 355, 1441
LweI GCATC 4 cut(s) 301, 327, 1004, 1240
MaeI CTAG 2 cut(s) 315, 1278
MaeII ACGT 1 cut(s) 26
MaeIII GTNAC 4 cut(s) 205, 499, 839, 1241
MbiI CCGCTC 3 cut(s) 12, 93, 1108
MfeI CAATTG 1 cut(s) 1365
MflI RGATCY 3 cut(s) 776, 1124, 1370
MhlI GDGCHC 1 cut(s) 1141
MlyI GAGTC 1 cut(s) 610
MmeI TCCRAC 1 cut(s) 32
MroNI GCCGGC 1 cut(s) 77
MroXI GAANNNNTTC 1 cut(s) 591
MseI TTAA 5 cut(s) 246, 609, 659, 762, 821
MslI CAYNNNNRTG 2 cut(s) 1260, 1443
MspA1I CMGCKG 1 cut(s) 1147
MspCI CTTAAG 1 cut(s) 820
MspI CCGG 6 cut(s) 39, 78, 348, 471, 1218, 1591
MspR9I CCNGG 6 cut(s) 348, 423, 472, 774, 1066, 1592
MunI CAATTG 1 cut(s) 1365
MvaI CCWGG 3 cut(s) 423, 774, 1066
MwoI GCNNNNNNNGC 3 cut(s) 432, 1470, 1510
NaeI GCCGGC 1 cut(s) 79
NciI CCSGG 3 cut(s) 348, 472, 1592
NdeI CATATG 1 cut(s) 1469
NgoMIV GCCGGC 1 cut(s) 77
NheI GCTAGC 1 cut(s) 314
NlaIII CATG 5 cut(s) 1076, 1184, 1233, 1448, 1526
NlaIV GGNNCC 5 cut(s) 346, 540, 786, 948, 1157
NmeAIII GCCGAG 1 cut(s) 473
NmuCI GTSAC 3 cut(s) 205, 499, 839
NsbI TGCGCA 1 cut(s) 1458
NspI RCATGY 1 cut(s) 1233
PaeR7I CTCGAG 2 cut(s) 1056, 1103
PagI TCATGA 2 cut(s) 1072, 1522
PciI ACATGT 1 cut(s) 1229
PcsI WCGNNNNNNNCGW 3 cut(s) 32, 58, 802
PdiI GCCGGC 1 cut(s) 79
PdmI GAANNNNTTC 1 cut(s) 591
PfeI GAWTC 7 cut(s) 108, 362, 382, 599, 671, 1400, 1564
PinAI ACCGGT 1 cut(s) 1217
PkrI GCNGC 5 cut(s) 14, 17, 60, 370, 1456
PleI GAGTC 1 cut(s) 610
PpsI GAGTC 1 cut(s) 610
PpuMI RGGWCCY 1 cut(s) 539
PscI ACATGT 1 cut(s) 1229
Psp5II RGGWCCY 1 cut(s) 539
Psp6I CCWGG 3 cut(s) 421, 772, 1064
PspGI CCWGG 3 cut(s) 421, 772, 1064
PspN4I GGNNCC 5 cut(s) 346, 540, 786, 948, 1157
PspPI GGNCC 2 cut(s) 344, 539
PspPPI RGGWCCY 1 cut(s) 539
PspXI VCTCGAGB 1 cut(s) 1103
PsrI GAACNNNNNNTAC 2 cut(s) 1219, 1251
PstI CTGCAG 1 cut(s) 1604
PsuI RGATCY 3 cut(s) 776, 1124, 1370
RsaI GTAC 3 cut(s) 193, 759, 1228
RsaNI GTAC 3 cut(s) 192, 758, 1227
RseI CAYNNNNRTG 2 cut(s) 1260, 1443
SaqAI TTAA 5 cut(s) 246, 609, 659, 762, 821
SatI GCNGC 5 cut(s) 13, 16, 59, 369, 1455
Sau96I GGNCC 2 cut(s) 344, 539
SchI GAGTC 1 cut(s) 610
ScrFI CCNGG 6 cut(s) 348, 423, 472, 774, 1066, 1592
SduI GDGCHC 1 cut(s) 1141
SfaNI GCATC 4 cut(s) 301, 327, 1004, 1240
SfcI CTRYAG 2 cut(s) 789, 1600
Sfr274I CTCGAG 2 cut(s) 1056, 1103
SinI GGWCC 2 cut(s) 344, 539
SlaI CTCGAG 2 cut(s) 1056, 1103
SmiMI CAYNNNNRTG 2 cut(s) 1260, 1443
SmlI CTYRAG 6 cut(s) 357, 388, 820, 1056, 1103, 1556
SmoI CTYRAG 6 cut(s) 357, 388, 820, 1056, 1103, 1556
SsiI CCGC 7 cut(s) 12, 58, 91, 1040, 1108, 1147, 1504
SspMI CTAG 2 cut(s) 315, 1278
StyD4I CCNGG 6 cut(s) 346, 421, 470, 772, 1064, 1590
TaaI ACNGT 3 cut(s) 205, 331, 505
TaiI ACGT 1 cut(s) 29
TaqI TCGA 9 cut(s) 8, 118, 574, 856, 1007, 1057, 1083, 1104, 1607
TatI WGTACW 2 cut(s) 191, 1226
TauI GCSGC 2 cut(s) 15, 61
TfiI GAWTC 7 cut(s) 108, 362, 382, 599, 671, 1400, 1564
Tru1I TTAA 5 cut(s) 246, 609, 659, 762, 821
Tru9I TTAA 5 cut(s) 246, 609, 659, 762, 821
TscAI CASTG 3 cut(s) 328, 609, 1279
TseFI GTSAC 3 cut(s) 205, 499, 839
TseI GCWGC 3 cut(s) 15, 368, 1454
Tsp45I GTSAC 3 cut(s) 205, 499, 839
TspRI CASTG 3 cut(s) 328, 609, 1279
Vha464I CTTAAG 1 cut(s) 820
VneI GTGCAC 1 cut(s) 1137
VpaK11BI GGWCC 2 cut(s) 344, 539
XapI RAATTY 6 cut(s) 587, 709, 967, 1009, 1096, 1526
XceI RCATGY 1 cut(s) 1233
XhoI CTCGAG 2 cut(s) 1056, 1103
XmnI GAANNNNTTC 1 cut(s) 591
XspI CTAG 2 cut(s) 315, 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.