Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000453

Physical Location & Seq

Genomic Coordinates Forward (+)

9225290 .. 9227797

Gene Structure 2508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00225870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGTGGCAGCATCAACCAAGAACATCGACCGCCTCAAGTCCAGCATGAGACTGTCGTCCGTCGCCCCAGCAACGGTGACCGGTCGGAAGGTCCATGAGCTGACCAACGTGGACTTGGCTATGAAGCTACATTACATCAAAGGGGTCTACTTTTTCAACAGTGATGCAGTCGAGGGGCTTACGGTGTTTGACTTGAAGAAGTCCATGGTCAGCCATTTGCTCCCAATTTACTTCGTTGCCGCCGGGAGAATCCGAAGATCCGAAACGGGCCGGCCTTTCATCACGTGTAACGATGCTGGTGTGAGAATTGTGGAGGCACGTTGTGACGAAACGGTCGATGAATGGTTGGCCATGGCTGTGGAGGATGATTCTACTTTTGATGGTCTTGCTTATAATCAAGCACTTGGTGAAACTGATCTTGATTTCTCTCCTTTGGTCTTTATACAGCAGTTCACTTGGTTCAAATGTGGAGGAATGTCAGTGGGAATTAGCTGGGCAAATGTTCTTGGAGATGCATTTTCAGCCTCAACCTTCATCAACCATTGGGGAAAGACCATGGCAGGTATTGTGCCACACAAGTCTCTGCATGTACCAGAACGACCTGCAAAATCTGAGCCCCCACTTTCAGTACTTCCCAATCTAATACCAAATGTCTTGAAAAGGGTTGATTCGGTTGGCGATTTATGGCTCACACCCAACAATTGCAAGATGAAGACACATACTTTTCATGTTCAGGCACAGAAAATTAACCATTTTCTCTCAAACCAAAGATCCAAGGTCTCAGCTTTTGAAGTACTCTCTGCAATCATATGGAGAGCCTTGTCCAAGATCAAGGAAGACCCAGAAGAGACAAGGATGGTGACTCTTTGTACAAACAAATCCCGTGAAAGAGAATTTGAGTTTCCAAGTAATAGGATGGTATGGAGCATAGTTAAAGCAGATTCCTGGGTTGCAGAAGCTGAGGTTTCAGAACTGGTGGAGCTCATTTTGAACAAAAGAGATGATGAGAATGGCATGATTGAAGAGGTGATGGGGAATAATGAGACTAGGGAAAAATCTTCAAACTTCATAGCATATGGGGCAAAATTGACATTTGTGAATTTGGAAGAAATAGAGATTTATGGGCTTGAATTGAAAGGGCAAAAGCCAGTTTATGCAAATTATTCCATTAATGGGGTTGGTGATGAAGGAGTTGTCTTGGTGCTTCCAGGACCAAAATGTGGTAAGGAGGGAGATGGTGTTAATGGTGATCGATCCATGACTGTGGTTATGCCTGAAAATCAACTAGCACAGCTGAAAGTTGAGCTAAAAAAGAATTGGAGTATTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009555 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016053 GO:0019752 GO:0032501 GO:0032502 GO:0032787 GO:0042761 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048229 GO:0048856 GO:0071704 GO:0072330 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

443

Amino Acids

49.4

Weight (kDa)

5.94

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	20 - 434	1.1e-34	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24510
fragaria_vesca	FvH4_5g34840 FvH4_5g34850
malus_domestica	MD08G1199200.v1.1 MD08G1199300.v1.1 MD15G1386300.v1.1 MD15G1386800.v1.1
prunus_persica	Prupe.1G533000_v2.0.a1
pyrus_communis	pycom08g17310 pycom15g34640 pycom15g34680
rosa_chinensis	RchiOBHm_Chr1g0364531 RchiOBHm_Chr4g0415781 RchiOBHm_Chr7g0232591 RchiOBHm_Chr7g0235521 RchiOBHm_Chr7g0235551 RchiOBHm_Chr7g0235561 RchiOBHm_Chr7g0235611 RchiOBHm_Chr7g0235721 RchiOBHm_Chr7g0235771
rosa_laevigata	RLG00000001141 RLG00000001147 RLG00000001148 RLG00000001151 RLG00000001152 RLG00000001321 RLG00000029743
rosa_multiflora	Rmu_co8320053.1_g000001 Rmu_co8402261.1_g000001 Rmu_co8447535.1_g000001 Rmu_sc0001912.1_g000001 Rmu_sc0001912.1_g000003 Rmu_sc0002617.1_g000016 Rmu_sc0002617.1_g000017 Rmu_sc0002892.1_g000022 Rmu_sc0002892.1_g000023 Rmu_sc0002892.1_g000041 Rmu_sc0002892.1_g000042 Rmu_sc0007994.1_g000006 Rmu_sc0010963.1_g000008 Rmu_sc0011151.1_g000005 Rmu_sc0012467.1_g000003 Rmu_ssc0000471.1_g000012 Rmu_ssc0000471.1_g000013
rosa_roxburghii	Rroxscaffold_3G00225680 Rroxscaffold_3G00225800 Rroxscaffold_3G00225870 Rroxscaffold_3G00228130 Rroxscaffold_6G00391050
rosa_rugosa	Rorug07G0275200 Rorug07G0291500.1 Rorug07G0292000 Rorug07G0292200 Rorug07G0292500 Rorug07G0295900
rosa_samantha	Rh7AG430000 Rh7AG446600 Rh7AG446800 Rh7AG447200 Rh7AG447300 Rh7AG447500 Rh7BG403500 Rh7BG418300 Rh7BG418400 Rh7BG418800 Rh7BG419000 Rh7BG419100 Rh7BG419300 Rh7BG419400 Rh7BG419500 Rh7BG419700 Rh7CG448700 Rh7CG466600 Rh7CG467000 Rh7CG467200 Rh7CG467300 Rh7CG467400 Rh7CG467500 Rh7CG468000 Rh7DG419700 Rh7DG435300 Rh7DG435400 Rh7DG435500 Rh7DG435600 Rh7DG436000 Rh7DG436500
rosa_wichuraiana	Rw0G011890 Rw7G035510 Rw7G037080 Rw7G037090 Rw7G037110 Rw7G037180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	393
AasI	GACNNNNNNGTC	1 cut(s)	332
Acc36I	ACCTGC	2 cut(s)	551, 610
AccB7I	CCANNNNNTGG	1 cut(s)	1220
AccI	GTMKAC	1 cut(s)	147
AciI	CCGC	2 cut(s)	31, 240
AclWI	GGATC	3 cut(s)	252, 765, 1248
AcoI	YGGCCR	1 cut(s)	348
AcsI	RAATTY	2 cut(s)	893, 1099
AcvI	CACGTG	1 cut(s)	285
AdeI	CACNNNGTG	2 cut(s)	323, 407
AfaI	GTAC	4 cut(s)	591, 630, 795, 871
AfiI	CCNNNNNNNGG	3 cut(s)	73, 1173, 1220
AflIII	ACRYGT	1 cut(s)	284
AgeI	ACCGGT	1 cut(s)	80
AjnI	CCWGG	2 cut(s)	944, 1207
AluBI	AGCT	8 cut(s)	100, 127, 492, 785, 959, 982, 1294, 1306
AluI	AGCT	8 cut(s)	100, 127, 492, 785, 959, 982, 1294, 1306
Alw21I	GWGCWC	1 cut(s)	984
Alw26I	GTCTC	5 cut(s)	43, 585, 784, 842, 1037
AlwI	GGATC	3 cut(s)	252, 765, 1248
AlwNI	CAGNNNCTG	1 cut(s)	959
AoxI	GGCC	3 cut(s)	268, 272, 348
ApeKI	GCWGC	1 cut(s)	8
ApoI	RAATTY	2 cut(s)	893, 1099
AseI	ATTAAT	1 cut(s)	1170
AsiGI	ACCGGT	1 cut(s)	80
AspS9I	GGNCC	3 cut(s)	91, 268, 1211
AsuC2I	CCSGG	1 cut(s)	244
AsuHPI	GGTGA	6 cut(s)	88, 419, 871, 1039, 1193, 1259
AvaII	GGWCC	2 cut(s)	91, 1211
BalI	TGGCCA	1 cut(s)	350
BanII	GRGCYC	2 cut(s)	618, 984
BarI	GAAGNNNNNNTAC	2 cut(s)	116, 148
BbrPI	CACGTG	1 cut(s)	285
BbsI	GAAGAC	2 cut(s)	719, 843
Bbv12I	GWGCWC	1 cut(s)	984
BbvCI	CCTCAGC	1 cut(s)	960
BbvI	GCAGC	1 cut(s)	20
BccI	CCATC	5 cut(s)	374, 850, 910, 1024, 1229
BciT130I	CCWGG	2 cut(s)	946, 1209
BcnI	CCSGG	1 cut(s)	244
BcoDI	GTCTC	5 cut(s)	43, 585, 784, 842, 1037
BfaI	CTAG	2 cut(s)	1047, 1286
BfuAI	ACCTGC	2 cut(s)	551, 610
BisI	GCNGC	2 cut(s)	9, 240
BlsI	GCNGC	2 cut(s)	10, 241
BmcAI	AGTACT	2 cut(s)	630, 795
Bme1390I	CCNGG	3 cut(s)	244, 946, 1209
Bme18I	GGWCC	2 cut(s)	91, 1211
BmgT120I	GGNCC	3 cut(s)	91, 268, 1211
BmrFI	CCNGG	3 cut(s)	244, 946, 1209
BmsI	GCATC	4 cut(s)	20, 154, 283, 502
BoxI	GACNNNNGTC	1 cut(s)	55
BpiI	GAAGAC	2 cut(s)	719, 843
Bpu10I	CCTNAGC	1 cut(s)	960
BpuEI	CTTGAG	1 cut(s)	20
BpuMI	CCSGG	1 cut(s)	244
Bsa29I	ATCGAT	1 cut(s)	1252
BsaAI	YACGTR	1 cut(s)	285
BsaI	GGTCTC	1 cut(s)	784
BsaJI	CCNNGG	5 cut(s)	204, 351, 555, 774, 945
BsaWI	WCCGGW	1 cut(s)	80
BsaXI	ACNNNNNCTCC	2 cut(s)	1224, 1254
Bsc4I	CCNNNNNNNGG	3 cut(s)	73, 1173, 1220
Bse118I	RCCGGY	2 cut(s)	80, 270
Bse1I	ACTGG	2 cut(s)	978, 1148
BseBI	CCWGG	2 cut(s)	946, 1209
BseCI	ATCGAT	1 cut(s)	1252
BseDI	CCNNGG	5 cut(s)	204, 351, 555, 774, 945
BseGI	GGATG	3 cut(s)	370, 861, 921
BseLI	CCNNNNNNNGG	3 cut(s)	73, 1173, 1220
BseMII	CTCAG	3 cut(s)	603, 795, 951
BseNI	ACTGG	2 cut(s)	978, 1148
BseXI	GCAGC	1 cut(s)	20
BseYI	CCCAGC	2 cut(s)	67, 492
Bsh1285I	CGRYCG	3 cut(s)	31, 85, 336
BshFI	GGCC	3 cut(s)	270, 274, 350
BshTI	ACCGGT	1 cut(s)	80
BshVI	ATCGAT	1 cut(s)	1252
BsiEI	CGRYCG	3 cut(s)	31, 85, 336
BsiHKAI	GWGCWC	1 cut(s)	984
BsiSI	CCGG	3 cut(s)	81, 243, 271
BslI	CCNNNNNNNGG	3 cut(s)	73, 1173, 1220
BsmAI	GTCTC	5 cut(s)	43, 585, 784, 842, 1037
BsnI	GGCC	3 cut(s)	270, 274, 350
Bso31I	GGTCTC	1 cut(s)	784
Bsp1286I	GDGCHC	2 cut(s)	618, 984
Bsp1407I	TGTACA	1 cut(s)	869
Bsp143I	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
Bsp19I	CCATGG	3 cut(s)	204, 351, 555
BspACI	CCGC	2 cut(s)	31, 240
BspANI	GGCC	3 cut(s)	270, 274, 350
BspCNI	CTCAG	3 cut(s)	604, 794, 952
BspDI	ATCGAT	1 cut(s)	1252
BspMI	ACCTGC	2 cut(s)	551, 610
BspPI	GGATC	3 cut(s)	252, 765, 1248
BspTNI	GGTCTC	1 cut(s)	784
BsrFI	RCCGGY	2 cut(s)	80, 270
BsrGI	TGTACA	1 cut(s)	869
BsrI	ACTGG	2 cut(s)	978, 1148
BssAI	RCCGGY	2 cut(s)	80, 270
BssECI	CCNNGG	5 cut(s)	204, 351, 555, 774, 945
BssMI	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
BssT1I	CCWWGG	4 cut(s)	204, 351, 555, 774
Bst2UI	CCWGG	2 cut(s)	946, 1209
Bst4CI	ACNGT	6 cut(s)	54, 76, 161, 184, 334, 1264
Bst6I	CTCTTC	2 cut(s)	840, 1017
BstAUI	TGTACA	1 cut(s)	869
BstBAI	YACGTR	1 cut(s)	285
BstC8I	GCNNGC	1 cut(s)	272
BstDEI	CTNAG	3 cut(s)	612, 781, 960
BstDSI	CCRYGG	3 cut(s)	204, 351, 555
BstEII	GGTNACC	1 cut(s)	76
BstF5I	GGATG	3 cut(s)	370, 861, 921
BstKTI	GATC	6 cut(s)	260, 418, 773, 831, 1252, 1256
BstMAI	GTCTC	5 cut(s)	43, 585, 784, 842, 1037
BstMBI	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
BstMCI	CGRYCG	3 cut(s)	31, 85, 336
BstMWI	GCNNNNNNNGC	2 cut(s)	521, 1079
BstNI	CCWGG	2 cut(s)	946, 1209
BstNSI	RCATGY	1 cut(s)	590
BstPAI	GACNNNNGTC	1 cut(s)	55
BstPI	GGTNACC	1 cut(s)	76
BstSCI	CCNGG	3 cut(s)	242, 944, 1207
BstV1I	GCAGC	1 cut(s)	20
BstV2I	GAAGAC	2 cut(s)	719, 843
BstX2I	RGATCY	2 cut(s)	257, 770
BstXI	CCANNNNNNTGG	2 cut(s)	358, 1264
BstYI	RGATCY	2 cut(s)	257, 770
Bsu15I	ATCGAT	1 cut(s)	1252
BsuRI	GGCC	3 cut(s)	270, 274, 350
BsuTUI	ATCGAT	1 cut(s)	1252
BtgI	CCRYGG	3 cut(s)	204, 351, 555
BtsCI	GGATG	3 cut(s)	370, 861, 921
BtsIMutI	CAGTG	2 cut(s)	166, 486
BveI	ACCTGC	2 cut(s)	551, 610
Cac8I	GCNNGC	1 cut(s)	272
CaiI	CAGNNNCTG	1 cut(s)	959
Cfr10I	RCCGGY	2 cut(s)	80, 270
Cfr13I	GGNCC	3 cut(s)	91, 268, 1211
ClaI	ATCGAT	1 cut(s)	1252
Csp6I	GTAC	4 cut(s)	590, 629, 794, 870
CspAI	ACCGGT	1 cut(s)	80
CviAII	CATG	9 cut(s)	46, 95, 205, 352, 556, 587, 728, 1015, 1258
CviQI	GTAC	4 cut(s)	590, 629, 794, 870
DdeI	CTNAG	3 cut(s)	612, 781, 960
DpnI	GATC	6 cut(s)	259, 417, 772, 830, 1251, 1255
DpnII	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
DraIII	CACNNNGTG	2 cut(s)	323, 407
DrdI	GACNNNNNNGTC	1 cut(s)	332
DseDI	GACNNNNNNGTC	1 cut(s)	332
EaeI	YGGCCR	1 cut(s)	348
Eam1104I	CTCTTC	2 cut(s)	840, 1017
EarI	CTCTTC	2 cut(s)	840, 1017
Ecl136II	GAGCTC	1 cut(s)	982
Eco130I	CCWWGG	4 cut(s)	204, 351, 555, 774
Eco24I	GRGCYC	2 cut(s)	618, 984
Eco31I	GGTCTC	1 cut(s)	784
Eco47I	GGWCC	2 cut(s)	91, 1211
Eco53kI	GAGCTC	1 cut(s)	982
Eco72I	CACGTG	1 cut(s)	285
Eco91I	GGTNACC	1 cut(s)	76
EcoICRI	GAGCTC	1 cut(s)	982
EcoO65I	GGTNACC	1 cut(s)	76
EcoRII	CCWGG	2 cut(s)	944, 1207
EcoT14I	CCWWGG	4 cut(s)	204, 351, 555, 774
EcoT22I	ATGCAT	1 cut(s)	517
EcoT38I	GRGCYC	2 cut(s)	618, 984
ErhI	CCWWGG	4 cut(s)	204, 351, 555, 774
FaeI	CATG	9 cut(s)	49, 98, 208, 355, 559, 590, 731, 1018, 1261
FatI	CATG	9 cut(s)	45, 94, 204, 351, 555, 586, 727, 1014, 1257
FauNDI	CATATG	2 cut(s)	809, 1075
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	2 cut(s)	9, 240
FokI	GGATG	3 cut(s)	377, 868, 928
FriOI	GRGCYC	2 cut(s)	618, 984
FseI	GGCCGGCC	1 cut(s)	274
Fsp4HI	GCNGC	2 cut(s)	9, 240
FspBI	CTAG	2 cut(s)	1047, 1286
GluI	GCNGC	2 cut(s)	9, 240
GsaI	CCCAGC	2 cut(s)	71, 496
HaeIII	GGCC	3 cut(s)	270, 274, 350
HapII	CCGG	3 cut(s)	81, 243, 271
Hin1II	CATG	9 cut(s)	49, 98, 208, 355, 559, 590, 731, 1018, 1261
HinfI	GANTC	5 cut(s)	249, 368, 668, 862, 941
HpaII	CCGG	3 cut(s)	81, 243, 271
HphI	GGTGA	6 cut(s)	88, 419, 871, 1039, 1193, 1259
Hpy166II	GTNNAC	3 cut(s)	112, 148, 453
Hpy188I	TCNGA	5 cut(s)	87, 254, 262, 613, 970
Hpy188III	TCNNGA	2 cut(s)	419, 655
Hpy8I	GTNNAC	3 cut(s)	112, 148, 453
Hpy99I	CGWCG	1 cut(s)	65
HpyAV	CCTTC	3 cut(s)	82, 541, 1181
HpyCH4III	ACNGT	6 cut(s)	54, 76, 161, 184, 334, 1264
HpyCH4IV	ACGT	3 cut(s)	108, 284, 319
HpyCH4V	TGCA	8 cut(s)	167, 515, 586, 605, 705, 803, 953, 1157
HpyF10VI	GCNNNNNNNGC	2 cut(s)	521, 1079
HpyF3I	CTNAG	3 cut(s)	612, 781, 960
HpySE526I	ACGT	3 cut(s)	108, 284, 319
Hsp92II	CATG	9 cut(s)	49, 98, 208, 355, 559, 590, 731, 1018, 1261
KroI	GCCGGC	1 cut(s)	270
KroNI	GCCGGC	1 cut(s)	272
Kzo9I	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
LmnI	GCTCC	3 cut(s)	225, 924, 979
Lsp1109I	GCAGC	1 cut(s)	20
LweI	GCATC	4 cut(s)	20, 154, 283, 502
MaeI	CTAG	2 cut(s)	1047, 1286
MaeII	ACGT	3 cut(s)	108, 284, 319
MaeIII	GTNAC	4 cut(s)	76, 287, 323, 859
MalI	GATC	6 cut(s)	259, 417, 772, 830, 1251, 1255
MboI	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
MboII	GAAGA	8 cut(s)	208, 267, 724, 848, 857, 1034, 1050, 1118
MfeI	CAATTG	1 cut(s)	700
MflI	RGATCY	2 cut(s)	257, 770
MhlI	GDGCHC	2 cut(s)	618, 984
MlsI	TGGCCA	1 cut(s)	350
MluNI	TGGCCA	1 cut(s)	350
MlyI	GAGTC	1 cut(s)	856
MmeI	TCCRAC	1 cut(s)	65
MnlI	CCTC	9 cut(s)	44, 166, 307, 355, 464, 535, 955, 1018, 1222
Mox20I	TGGCCA	1 cut(s)	350
Mph1103I	ATGCAT	1 cut(s)	517
MroNI	GCCGGC	1 cut(s)	270
MscI	TGGCCA	1 cut(s)	350
MseI	TTAA	4 cut(s)	747, 933, 1170, 1242
MslI	CAYNNNNRTG	2 cut(s)	356, 1262
Msp20I	TGGCCA	1 cut(s)	350
MspA1I	CMGCKG	1 cut(s)	1294
MspI	CCGG	3 cut(s)	81, 243, 271
MspR9I	CCNGG	3 cut(s)	244, 946, 1209
MunI	CAATTG	1 cut(s)	700
MvaI	CCWGG	2 cut(s)	946, 1209
MwoI	GCNNNNNNNGC	2 cut(s)	521, 1079
NaeI	GCCGGC	1 cut(s)	272
NciI	CCSGG	1 cut(s)	244
NcoI	CCATGG	3 cut(s)	204, 351, 555
NdeI	CATATG	2 cut(s)	809, 1075
NdeII	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
NgoMIV	GCCGGC	1 cut(s)	270
NlaIII	CATG	9 cut(s)	49, 98, 208, 355, 559, 590, 731, 1018, 1261
NmuCI	GTSAC	3 cut(s)	76, 323, 859
NsiI	ATGCAT	1 cut(s)	517
NspI	RCATGY	1 cut(s)	590
PcsI	WCGNNNNNNNCGW	1 cut(s)	333
PdiI	GCCGGC	1 cut(s)	272
PfeI	GAWTC	4 cut(s)	249, 368, 668, 941
PflMI	CCANNNNNTGG	1 cut(s)	1220
PfoI	TCCNGGA	1 cut(s)	1207
PinAI	ACCGGT	1 cut(s)	80
PkrI	GCNGC	2 cut(s)	10, 241
PleI	GAGTC	1 cut(s)	856
PmaCI	CACGTG	1 cut(s)	285
PmlI	CACGTG	1 cut(s)	285
PpsI	GAGTC	1 cut(s)	856
Ppu21I	YACGTR	1 cut(s)	285
PshAI	GACNNNNGTC	1 cut(s)	55
PshBI	ATTAAT	1 cut(s)	1170
PsiI	TTATAA	1 cut(s)	393
Psp124BI	GAGCTC	1 cut(s)	984
Psp6I	CCWGG	2 cut(s)	944, 1207
PspCI	CACGTG	1 cut(s)	285
PspEI	GGTNACC	1 cut(s)	76
PspFI	CCCAGC	2 cut(s)	67, 492
PspGI	CCWGG	2 cut(s)	944, 1207
PspPI	GGNCC	3 cut(s)	91, 268, 1211
PstNI	CAGNNNCTG	1 cut(s)	959
PsuI	RGATCY	2 cut(s)	257, 770
PvuII	CAGCTG	1 cut(s)	1294
RigI	GGCCGGCC	1 cut(s)	274
RsaI	GTAC	4 cut(s)	591, 630, 795, 871
RsaNI	GTAC	4 cut(s)	590, 629, 794, 870
RseI	CAYNNNNRTG	2 cut(s)	356, 1262
SacI	GAGCTC	1 cut(s)	984
SaqAI	TTAA	4 cut(s)	747, 933, 1170, 1242
SatI	GCNGC	2 cut(s)	9, 240
Sau3AI	GATC	6 cut(s)	257, 415, 770, 828, 1249, 1253
Sau96I	GGNCC	3 cut(s)	91, 268, 1211
ScaI	AGTACT	2 cut(s)	630, 795
SchI	GAGTC	1 cut(s)	856
ScrFI	CCNGG	3 cut(s)	244, 946, 1209
SduI	GDGCHC	2 cut(s)	618, 984
SfaNI	GCATC	4 cut(s)	20, 154, 283, 502
SinI	GGWCC	2 cut(s)	91, 1211
SmiMI	CAYNNNNRTG	2 cut(s)	356, 1262
SmlI	CTYRAG	1 cut(s)	35
SmoI	CTYRAG	1 cut(s)	35
SsiI	CCGC	2 cut(s)	31, 240
SspMI	CTAG	2 cut(s)	1047, 1286
SstI	GAGCTC	1 cut(s)	984
StyD4I	CCNGG	3 cut(s)	242, 944, 1207
StyI	CCWWGG	4 cut(s)	204, 351, 555, 774
TaaI	ACNGT	6 cut(s)	54, 76, 161, 184, 334, 1264
TaiI	ACGT	3 cut(s)	111, 287, 322
TaqI	TCGA	4 cut(s)	27, 171, 336, 1252
TatI	WGTACW	3 cut(s)	628, 793, 869
TauI	GCSGC	1 cut(s)	242
TfiI	GAWTC	4 cut(s)	249, 368, 668, 941
Tru1I	TTAA	4 cut(s)	747, 933, 1170, 1242
Tru9I	TTAA	4 cut(s)	747, 933, 1170, 1242
TscAI	CASTG	2 cut(s)	166, 486
TseFI	GTSAC	3 cut(s)	76, 323, 859
TseI	GCWGC	1 cut(s)	8
Tsp45I	GTSAC	3 cut(s)	76, 323, 859
TspDTI	ATGAA	8 cut(s)	137, 268, 354, 523, 716, 725, 1057, 1200
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	2 cut(s)	166, 486
Van91I	CCANNNNNTGG	1 cut(s)	1220
VpaK11BI	GGWCC	2 cut(s)	91, 1211
VspI	ATTAAT	1 cut(s)	1170
XapI	RAATTY	2 cut(s)	893, 1099
XceI	RCATGY	1 cut(s)	590
XcmI	CCANNNNNNNNNTGG	1 cut(s)	112
XmiI	GTMKAC	1 cut(s)	147
XspI	CTAG	2 cut(s)	1047, 1286
ZrmI	AGTACT	2 cut(s)	630, 795
Zsp2I	ATGCAT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.