RLG00000004497

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
59848753 .. 59849684
932 bp
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UTR
Exon/CDS
Intron
RLM00000004497

Sequence Viewer

Length: 531 bp
ATGGTTGGGGGAGAAAGGACTTGTAAGATACCCAACGTTGAGTATGATTGGGGAGAAAGGACTCAAAAGATACCCAATGCTAAGTATCGACTTGATTGGGAAGTATTCAAGCCCTCTGATGCCCTCAATTCTCATGTTTTTGTTTTGGATCCCTTTGATGGAAAGATCACTATTGATCGTAGTTTTCCCAAAGCAAATGCAACAAAGACCAATGCCAGAGTCTTGGCTACCACTGACCACAAGGTGTACGTACTCGGAAAAGGTGACCTAGCTGCTGGCTACACCACTAATGGGTTGGTGGGATATGTCTTTGATCACTATGGCAACCTGATGTTTCAACAACTGCTCCAGCATCATAATGCTCATCTTCCTTCTCCAAAACAGATGAGCTTTGGGGGAAAAGTTGTATATGTGTGTGGTGACAAGTTTTGTCCCATTTCGTCAGGAGAAATTGGCAAACGTTCATGGTCATTAGCTGTGGCAACCTTTCAGCTAACCTTTACTATGGTATTTTTGATGGTCTATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

177

Amino Acids

19.78

Weight (kDa)

8.93

Isoelectric Point (pI)

27.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 2 cut(s) 36, 460
AclWI GGATC 2 cut(s) 143, 156
AdeI CACNNNGTG 1 cut(s) 244
AfaI GTAC 2 cut(s) 248, 252
AfiI CCNNNNNNNGG 2 cut(s) 158, 291
AgsI TTSAA 2 cut(s) 109, 338
AluBI AGCT 4 cut(s) 272, 390, 476, 493
AluI AGCT 4 cut(s) 272, 390, 476, 493
AlwI GGATC 2 cut(s) 143, 156
ApeKI GCWGC 1 cut(s) 272
AsuHPI GGTGA 2 cut(s) 275, 431
BamHI GGATCC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 259
BccI CCATC 2 cut(s) 152, 511
BclI TGATCA 1 cut(s) 313
BfaI CTAG 1 cut(s) 269
BisI GCNGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 274
BmiI GGNNCC 1 cut(s) 150
BmsI GCATC 2 cut(s) 109, 361
BpmI CTGGAG 1 cut(s) 332
BsaAI YACGTR 1 cut(s) 250
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 2 cut(s) 158, 291
BseLI CCNNNNNNNGG 2 cut(s) 158, 291
BseXI GCAGC 1 cut(s) 259
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 2 cut(s) 158, 291
BsmFI GGGAC 1 cut(s) 417
Bsp143I GATC 4 cut(s) 148, 165, 175, 313
BspLI GGNNCC 1 cut(s) 150
BspPI GGATC 2 cut(s) 143, 156
BssMI GATC 4 cut(s) 148, 165, 175, 313
BstBAI YACGTR 1 cut(s) 250
BstC8I GCNNGC 1 cut(s) 277
BstDEI CTNAG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 263
BstKTI GATC 4 cut(s) 151, 168, 178, 316
BstMBI GATC 4 cut(s) 148, 165, 175, 313
BstPI GGTNACC 1 cut(s) 263
BstSNI TACGTA 1 cut(s) 250
BstV1I GCAGC 1 cut(s) 259
BstX2I RGATCY 1 cut(s) 148
BstXI CCANNNNNNTGG 1 cut(s) 223
BstYI RGATCY 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 277
Csp6I GTAC 2 cut(s) 247, 251
CviAII CATG 2 cut(s) 134, 465
CviJI RGCY 7 cut(s) 112, 227, 272, 279, 390, 476, 493
CviKI_1 RGCY 7 cut(s) 112, 227, 272, 279, 390, 476, 493
CviQI GTAC 2 cut(s) 247, 251
DdeI CTNAG 1 cut(s) 81
DpnI GATC 4 cut(s) 150, 167, 177, 315
DpnII GATC 4 cut(s) 148, 165, 175, 313
DraIII CACNNNGTG 1 cut(s) 244
Eco105I TACGTA 1 cut(s) 250
Eco91I GGTNACC 1 cut(s) 263
EcoO65I GGTNACC 1 cut(s) 263
FaeI CATG 2 cut(s) 137, 468
FaiI YATR 9 cut(s) 45, 135, 306, 321, 357, 409, 411, 466, 506
FaqI GGGAC 1 cut(s) 417
FatI CATG 2 cut(s) 133, 464
FbaI TGATCA 1 cut(s) 313
Fnu4HI GCNGC 1 cut(s) 273
Fsp4HI GCNGC 1 cut(s) 273
FspBI CTAG 1 cut(s) 269
GluI GCNGC 1 cut(s) 273
GsuI CTGGAG 1 cut(s) 332
Hin1II CATG 2 cut(s) 137, 468
HinfI GANTC 2 cut(s) 61, 219
HphI GGTGA 2 cut(s) 275, 431
Hpy166II GTNNAC 1 cut(s) 247
Hpy188I TCNGA 3 cut(s) 118, 257, 530
Hpy188III TCNNGA 1 cut(s) 444
Hpy8I GTNNAC 1 cut(s) 247
HpyAV CCTTC 1 cut(s) 381
HpyCH4IV ACGT 3 cut(s) 36, 249, 460
HpyCH4V TGCA 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 81
HpySE526I ACGT 3 cut(s) 36, 249, 460
Hsp92II CATG 2 cut(s) 137, 468
Ksp22I TGATCA 1 cut(s) 313
Kzo9I GATC 4 cut(s) 148, 165, 175, 313
LmnI GCTCC 1 cut(s) 351
LpnPI CCDG 5 cut(s) 229, 261, 341, 362, 429
Lsp1109I GCAGC 1 cut(s) 259
LweI GCATC 2 cut(s) 109, 361
MaeI CTAG 1 cut(s) 269
MaeII ACGT 3 cut(s) 36, 249, 460
MaeIII GTNAC 2 cut(s) 263, 419
MalI GATC 4 cut(s) 150, 167, 177, 315
MboI GATC 4 cut(s) 148, 165, 175, 313
MboII GAAGA 1 cut(s) 359
MflI RGATCY 1 cut(s) 148
MluCI AATT 2 cut(s) 127, 450
MlyI GAGTC 2 cut(s) 55, 228
MnlI CCTC 2 cut(s) 124, 134
MslI CAYNNNNRTG 1 cut(s) 357
NdeII GATC 4 cut(s) 148, 165, 175, 313
NlaIII CATG 2 cut(s) 137, 468
NlaIV GGNNCC 1 cut(s) 150
NmuCI GTSAC 2 cut(s) 263, 419
PkrI GCNGC 1 cut(s) 274
PleI GAGTC 2 cut(s) 55, 227
PpsI GAGTC 2 cut(s) 55, 227
Ppu21I YACGTR 1 cut(s) 250
Psp1406I AACGTT 2 cut(s) 36, 460
PspEI GGTNACC 1 cut(s) 263
PspN4I GGNNCC 1 cut(s) 150
PsuI RGATCY 1 cut(s) 148
RsaI GTAC 2 cut(s) 248, 252
RsaNI GTAC 2 cut(s) 247, 251
RseI CAYNNNNRTG 1 cut(s) 357
SatI GCNGC 1 cut(s) 273
Sau3AI GATC 4 cut(s) 148, 165, 175, 313
SchI GAGTC 2 cut(s) 55, 228
SfaNI GCATC 2 cut(s) 109, 361
SmiMI CAYNNNNRTG 1 cut(s) 357
SnaBI TACGTA 1 cut(s) 250
Sse9I AATT 2 cut(s) 127, 450
SspMI CTAG 1 cut(s) 269
TaiI ACGT 3 cut(s) 39, 252, 463
TaqI TCGA 1 cut(s) 88
TasI AATT 2 cut(s) 127, 450
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 2 cut(s) 263, 419
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 2 cut(s) 263, 419
TspDTI ATGAA 1 cut(s) 453
TspRI CASTG 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 1 cut(s) 292
XspI CTAG 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.