Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001040

Physical Location & Seq

Genomic Coordinates Forward (+)

29466671 .. 29469214

Gene Structure 2544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00105940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGGGAGAAGGTCGAAAACTATTTGTACTTGCAATTTAAGGATCATCTTAGAAGGGTGAATCTTAACAAGCTCGAGGAGCAAAAGGAATCTCCTGAGTTTGAACTAGTGGCAGATTTTCTGGAGGAGAAACTCCCCTACGGAATGTGTGTTTTTTTGCAAGATTCGAATAAATTGTACATGGTTGGAGGAGAAAGGATTCGGAACAATGAAAGAGCTGGAAGGTATTGGTGGCGAGGATTTCTCGATGCTGCAAACGAACTTGACTCCTCTGGCCTCAGTTGTGATGTTTTTGTGTTAGATTCCTCCAACGGAAAAATCTCTGCTGCTCCTGGTTTTCCAAAACCAAAAGGACCAAAGATCAATGCCAGAGCTCTGGCCACCATGGGTGACAAGGTATACGTAATGAGTTTTCGGCCATATTACTATCACGGTGCGCTTCCATCTCCGGCCTTTGAGTGCTATGATTCTGCAAAACAGTCATGGGAGGAGCTGCCTGTGCCTCCAAATTACTATTGTTCGTCTTCTGCTGCTACTACTTATGGGTTTCATTTTGTGCTGGGCCCAAAGATTTATTTGTGCACTCCTCATGGCTTCTTTTGTTACAACGTGGATCAATCCCCACCTAAATGGGAATTCATAGAAGATGCAGAATGGCAGTTTGATCAGCTCCCCTCATATAATTCAGAAGAGGAAATGGAAGACAACAAGATTGAGGACTACTCACTGCCTCTGATACCGGCTTTGCCCTACCGTTCTATATGTTTTGCAGAACCCGGAAAAGGTGGCCTCGCCGTTGGCTATACTGCTCAAGGATTAGTGGGTTACTTCTTTGCGCCTAATGGCAACCTACTGTATCAAGAGCCACTTAATCAGTTGAACAGCAACTCTAAGCTTCCCTCCCCCAATAGCTATTTCTTTGGTGGAAAAGTTTGCTATGTAGGTGAAAACAAATTCTGTCTCATTCTATCTGGAGAAATTGATCAAACTTCATGGTCGTGGTCGTTAGCTGTAGCAACTTTTGATGTGAAATGTAAAGCTAATGTTCACAATGGTGATGGAGGAGGGAAACACTTCTACCATGATCTTCCTCTGTGTTATCATCAGTTTGACAATATTAATTCGTGTTTTTCTAATGCTTGCAAATATGAGAACAGCGAGTCTCCGAGGCTTTATGATTACCTTAATTTCCAGGATGCCTTCGTCATATCCTCCGAGCTTAAGAGCCAGCGTCACCACAACCACAAGCGCAAGCGGAGTATGATGGGTGTAGTTGGATTTTGGACCTTTGGAGCTTTTCTTTTAGCTGCTTTTGTGCTATATAGCCATGTCAAGCAAATGGAAGATGGAAAGTCTTTAAGATTACCATTTCTGGTTGCCCAAGGTAGAGCTGAGGCTTTTAGCTGTCCCATCGCCTACTTTTCCAGAACAGAAAAACCAGATTTGAAGTACAAGTATTATCCTACTGTTCTGGAATTGGCTTCATACTGTGATGTTCTAGTTGTTGCATGCTCACTTACTGAAGAAACCCGGCACATCATCAATCGTGAAGTCATTGATGCTTTGGGGCCAAAGGGTGTTCTCATTAACATTGGGAGGGGTCATCATGTTGATGAGCCTGAGTTGGTATCTGCACTGCTAGAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008150 GO:0008152 GO:0009853 GO:0009854 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0016618 GO:0030267 GO:0043094 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00130 ko00260 ko00350 ko00360 ko00630 ko00960 ko01100 ko01110 ko01130 ko01200 map00130 map00260 map00350 map00360 map00630 map00960 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

2-Hacid_dh 2-Hacid_dh_C

Protein Analysis

549

Amino Acids

62.22

Weight (kDa)

5.59

Isoelectric Point (pI)

54.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
2-Hacid_dh_C	PF02826	462 - 549	1.4e-18	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001040)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g25891 FvH4_2g13411
rosa_chinensis	RchiOBHm_Chr2g0136121 RchiOBHm_Chr2g0138881
rosa_laevigata	RLG00000004497 RLG00000004523 RLG00000015462 RLG00000019566 RLG00000019706 RLG00000019762
rosa_multiflora	Rmu_sc0002070.1_g000013 Rmu_sc0010558.1_g000006 Rmu_sc0010783.1_g000001 Rmu_sc0010783.1_g000002 Rmu_sc0039275.1_g000002
rosa_roxburghii	Rroxscaffold_2G00105940 Rroxscaffold_3G00264300 Rroxscaffold_7G00216760
rosa_rugosa	Rorug02G0352600 Rorug03G0322000 Rorug05G0502700 Rorug06G0507000
rosa_samantha	Rh2AG147800 Rh2AG395200 Rh2AG402800 Rh2BG153100 Rh2BG404000 Rh2BG405000 Rh2BG411800 Rh2BG411900 Rh2BG412000 Rh2BG412100 Rh2BG412200 Rh2BG412300 Rh2BG412400 Rh2BG412500 Rh2BG412600 Rh2BG412700 Rh2BG412800 Rh2BG412900 Rh2BG413000 Rh2BG413100 Rh2BG413200 Rh2BG413300 Rh2CG372000 Rh2CG381800 Rh2CG388900 Rh2DG153400 Rh2DG417000 Rh2DG423000 Rh4BG147300 Rh4DG020200 Rh4DG020600 Rh6AG011000 Rh6CG008900 Rh6DG009900 Rh7AG113700 Rh7BG116200 Rh7BG116300 Rh7CG118800
rosa_wichuraiana	Rw2G032770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	399
AciI	CCGC	1 cut(s)	1255
AclWI	GGATC	2 cut(s)	51, 621
AcoI	YGGCCR	2 cut(s)	378, 416
AcsI	RAATTY	2 cut(s)	635, 953
AcuI	CTGAAG	1 cut(s)	1542
AfaI	GTAC	3 cut(s)	29, 179, 1451
AfiI	CCNNNNNNNGG	1 cut(s)	782
AflII	CTTAAG	1 cut(s)	1220
AgsI	TTSAA	3 cut(s)	104, 880, 1447
AhlI	ACTAGT	1 cut(s)	106
AjnI	CCWGG	2 cut(s)	331, 1191
AjuI	GAANNNNNNNTTGG	2 cut(s)	899, 931
AleI	CACNNNNGTG	1 cut(s)	1053
Alw21I	GWGCWC	2 cut(s)	376, 584
Alw26I	GTCTC	2 cut(s)	965, 1167
Alw44I	GTGCAC	1 cut(s)	580
AlwI	GGATC	2 cut(s)	51, 621
Ama87I	CYCGRG	1 cut(s)	74
AoxI	GGCC	7 cut(s)	274, 378, 416, 450, 562, 787, 1568
ApaI	GGGCCC	1 cut(s)	566
ApaLI	GTGCAC	1 cut(s)	580
ApeKI	GCWGC	5 cut(s)	251, 326, 493, 530, 1307
ApoI	RAATTY	2 cut(s)	635, 953
AseI	ATTAAT	1 cut(s)	1119
Asp700I	GAANNNNTTC	2 cut(s)	198, 1073
AspLEI	GCGC	3 cut(s)	439, 838, 1251
AspS9I	GGNCC	5 cut(s)	353, 562, 563, 1284, 1568
AsuC2I	CCSGG	2 cut(s)	777, 1531
AsuHPI	GGTGA	5 cut(s)	70, 401, 956, 1067, 1226
AsuII	TTCGAA	1 cut(s)	167
AvaI	CYCGRG	1 cut(s)	74
AvaII	GGWCC	2 cut(s)	353, 1284
BaeGI	GKGCMC	2 cut(s)	566, 584
BalI	TGGCCA	1 cut(s)	380
BanII	GRGCYC	2 cut(s)	376, 566
BbsI	GAAGAC	2 cut(s)	516, 708
Bbv12I	GWGCWC	2 cut(s)	376, 584
BbvCI	CCTCAGC	1 cut(s)	1392
BbvI	GCAGC	5 cut(s)	238, 313, 480, 517, 1294
BccI	CCATC	5 cut(s)	451, 1052, 1258, 1340, 1418
BceAI	ACGGC	1 cut(s)	779
BciT130I	CCWGG	2 cut(s)	333, 1193
BclI	TGATCA	2 cut(s)	664, 982
BcnI	CCSGG	2 cut(s)	777, 1531
BcoDI	GTCTC	2 cut(s)	965, 1167
BcuI	ACTAGT	1 cut(s)	106
BfaI	CTAG	3 cut(s)	107, 1499, 1640
BfmI	CTRYAG	1 cut(s)	1011
BfrI	CTTAAG	1 cut(s)	1220
BisI	GCNGC	5 cut(s)	252, 327, 494, 531, 1308
BlsI	GCNGC	5 cut(s)	253, 328, 495, 532, 1309
Bme1390I	CCNGG	4 cut(s)	333, 777, 1193, 1531
Bme18I	GGWCC	2 cut(s)	353, 1284
BmeT110I	CYCGRG	1 cut(s)	74
BmgT120I	GGNCC	5 cut(s)	353, 562, 563, 1284, 1568
BmiI	GGNNCC	2 cut(s)	564, 1569
BmrFI	CCNGG	4 cut(s)	333, 777, 1193, 1531
BmsI	GCATC	4 cut(s)	238, 637, 1186, 1549
BpiI	GAAGAC	2 cut(s)	516, 708
BplI	GAGNNNNNCTC	4 cut(s)	228, 260, 707, 739
BpmI	CTGGAG	2 cut(s)	143, 993
Bpu10I	CCTNAGC	1 cut(s)	1392
Bpu14I	TTCGAA	1 cut(s)	167
BpuEI	CTTGAG	1 cut(s)	795
BpuMI	CCSGG	2 cut(s)	777, 1531
BsaAI	YACGTR	1 cut(s)	403
BsaJI	CCNNGG	3 cut(s)	384, 1166, 1381
Bsc4I	CCNNNNNNNGG	1 cut(s)	782
Bse118I	RCCGGY	1 cut(s)	739
BseBI	CCWGG	2 cut(s)	333, 1193
BseDI	CCNNGG	3 cut(s)	384, 1166, 1381
BseGI	GGATG	1 cut(s)	1201
BseLI	CCNNNNNNNGG	1 cut(s)	782
BseMII	CTCAG	4 cut(s)	87, 292, 1383, 1611
BseRI	GAGGAG	7 cut(s)	92, 140, 204, 259, 503, 576, 1077
BseSI	GKGCMC	2 cut(s)	566, 584
BseXI	GCAGC	5 cut(s)	238, 313, 480, 517, 1294
BseYI	CCCAGC	1 cut(s)	559
BsgI	GTGCAG	1 cut(s)	1617
BshFI	GGCC	7 cut(s)	276, 380, 418, 452, 564, 789, 1570
BsiHKAI	GWGCWC	2 cut(s)	376, 584
BsiHKCI	CYCGRG	1 cut(s)	74
BsiSI	CCGG	4 cut(s)	449, 740, 777, 1531
BslFI	GGGAC	1 cut(s)	1392
BslI	CCNNNNNNNGG	1 cut(s)	782
BsmAI	GTCTC	2 cut(s)	965, 1167
BsmFI	GGGAC	1 cut(s)	1392
BsnI	GGCC	7 cut(s)	276, 380, 418, 452, 564, 789, 1570
BsoBI	CYCGRG	1 cut(s)	74
Bsp119I	TTCGAA	1 cut(s)	167
Bsp120I	GGGCCC	1 cut(s)	562
Bsp1286I	GDGCHC	3 cut(s)	376, 566, 584
Bsp1407I	TGTACA	1 cut(s)	177
Bsp143I	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
Bsp19I	CCATGG	1 cut(s)	384
BspACI	CCGC	1 cut(s)	1255
BspANI	GGCC	7 cut(s)	276, 380, 418, 452, 564, 789, 1570
BspCNI	CTCAG	4 cut(s)	88, 291, 1384, 1612
BspLI	GGNNCC	2 cut(s)	564, 1569
BspPI	GGATC	2 cut(s)	51, 621
BspT104I	TTCGAA	1 cut(s)	167
BspTI	CTTAAG	1 cut(s)	1220
BsrFI	RCCGGY	1 cut(s)	739
BsrGI	TGTACA	1 cut(s)	177
BssAI	RCCGGY	1 cut(s)	739
BssECI	CCNNGG	3 cut(s)	384, 1166, 1381
BssMI	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
BssNAI	GTATAC	1 cut(s)	400
BssT1I	CCWWGG	2 cut(s)	384, 1381
Bst1107I	GTATAC	1 cut(s)	400
Bst2UI	CCWGG	2 cut(s)	333, 1193
Bst4CI	ACNGT	6 cut(s)	434, 480, 755, 855, 1468, 1490
Bst6I	CTCTTC	1 cut(s)	684
BstAFI	CTTAAG	1 cut(s)	1220
BstAUI	TGTACA	1 cut(s)	177
BstBAI	YACGTR	1 cut(s)	403
BstBI	TTCGAA	1 cut(s)	167
BstC8I	GCNNGC	4 cut(s)	1141, 1229, 1253, 1510
BstDEI	CTNAG	6 cut(s)	50, 96, 278, 891, 1392, 1620
BstDSI	CCRYGG	1 cut(s)	384
BstF5I	GGATG	1 cut(s)	1201
BstHHI	GCGC	3 cut(s)	439, 838, 1251
BstKTI	GATC	6 cut(s)	46, 363, 616, 667, 985, 1087
BstMAI	GTCTC	2 cut(s)	965, 1167
BstMBI	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
BstMWI	GCNNNNNNNGC	2 cut(s)	79, 499
BstNI	CCWGG	2 cut(s)	333, 1193
BstNSI	RCATGY	1 cut(s)	1512
BstSCI	CCNGG	4 cut(s)	331, 775, 1191, 1529
BstSFI	CTRYAG	1 cut(s)	1011
BstSLI	GKGCMC	2 cut(s)	566, 584
BstSNI	TACGTA	1 cut(s)	403
BstV1I	GCAGC	5 cut(s)	238, 313, 480, 517, 1294
BstV2I	GAAGAC	2 cut(s)	516, 708
BstXI	CCANNNNNNTGG	2 cut(s)	376, 630
BstZ17I	GTATAC	1 cut(s)	400
BsuRI	GGCC	7 cut(s)	276, 380, 418, 452, 564, 789, 1570
BtgI	CCRYGG	1 cut(s)	384
BtgZI	GCGATG	1 cut(s)	1396
BtsCI	GGATG	1 cut(s)	1201
BtsI	GCAGTG	2 cut(s)	725, 1634
BtsIMutI	CAGTG	2 cut(s)	725, 1634
Cac8I	GCNNGC	4 cut(s)	1141, 1229, 1253, 1510
CfoI	GCGC	3 cut(s)	439, 838, 1251
Cfr10I	RCCGGY	1 cut(s)	739
Cfr13I	GGNCC	5 cut(s)	353, 562, 563, 1284, 1568
CseI	GACGC	1 cut(s)	1220
Csp6I	GTAC	3 cut(s)	28, 178, 1450
CviAII	CATG	9 cut(s)	181, 385, 483, 590, 993, 1082, 1328, 1509, 1607
CviQI	GTAC	3 cut(s)	28, 178, 1450
DdeI	CTNAG	6 cut(s)	50, 96, 278, 891, 1392, 1620
DpnI	GATC	6 cut(s)	45, 362, 615, 666, 984, 1086
DpnII	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
EaeI	YGGCCR	2 cut(s)	378, 416
Eam1104I	CTCTTC	1 cut(s)	684
EarI	CTCTTC	1 cut(s)	684
Ecl136II	GAGCTC	1 cut(s)	374
Eco105I	TACGTA	1 cut(s)	403
Eco130I	CCWWGG	2 cut(s)	384, 1381
Eco24I	GRGCYC	2 cut(s)	376, 566
Eco47I	GGWCC	2 cut(s)	353, 1284
Eco53kI	GAGCTC	1 cut(s)	374
Eco57I	CTGAAG	1 cut(s)	1542
Eco88I	CYCGRG	1 cut(s)	74
EcoICRI	GAGCTC	1 cut(s)	374
EcoRI	GAATTC	1 cut(s)	635
EcoRII	CCWGG	2 cut(s)	331, 1191
EcoT14I	CCWWGG	2 cut(s)	384, 1381
EcoT38I	GRGCYC	2 cut(s)	376, 566
ErhI	CCWWGG	2 cut(s)	384, 1381
FaeI	CATG	9 cut(s)	184, 388, 486, 593, 996, 1085, 1331, 1512, 1610
FalI	AAGNNNNNCTT	2 cut(s)	852, 884
FaqI	GGGAC	1 cut(s)	1392
FatI	CATG	9 cut(s)	180, 384, 482, 589, 992, 1081, 1327, 1508, 1606
FbaI	TGATCA	2 cut(s)	664, 982
FblI	GTMKAC	1 cut(s)	399
Fnu4HI	GCNGC	5 cut(s)	252, 327, 494, 531, 1308
FokI	GGATG	1 cut(s)	1208
FriOI	GRGCYC	2 cut(s)	376, 566
Fsp4HI	GCNGC	5 cut(s)	252, 327, 494, 531, 1308
FspBI	CTAG	3 cut(s)	107, 1499, 1640
GlaI	GCGC	3 cut(s)	438, 837, 1250
GluI	GCNGC	5 cut(s)	252, 327, 494, 531, 1308
GsaI	CCCAGC	1 cut(s)	563
GsuI	CTGGAG	2 cut(s)	143, 993
HaeIII	GGCC	7 cut(s)	276, 380, 418, 452, 564, 789, 1570
HapII	CCGG	4 cut(s)	449, 740, 777, 1531
HgaI	GACGC	1 cut(s)	1220
HhaI	GCGC	3 cut(s)	439, 838, 1251
Hin1II	CATG	9 cut(s)	184, 388, 486, 593, 996, 1085, 1331, 1512, 1610
Hin6I	GCGC	3 cut(s)	437, 836, 1249
HinP1I	GCGC	3 cut(s)	437, 836, 1249
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	8 cut(s)	61, 89, 164, 199, 266, 302, 467, 1160
HpaII	CCGG	4 cut(s)	449, 740, 777, 1531
HphI	GGTGA	5 cut(s)	70, 401, 956, 1067, 1226
Hpy166II	GTNNAC	3 cut(s)	400, 582, 1048
Hpy188I	TCNGA	5 cut(s)	204, 688, 735, 1167, 1216
Hpy188III	TCNNGA	8 cut(s)	95, 122, 245, 860, 972, 1425, 1472, 1547
Hpy8I	GTNNAC	3 cut(s)	400, 582, 1048
HpyAV	CCTTC	5 cut(s)	4, 48, 216, 1210, 1637
HpyCH4III	ACNGT	6 cut(s)	434, 480, 755, 855, 1468, 1490
HpyCH4IV	ACGT	2 cut(s)	402, 609
HpyF10VI	GCNNNNNNNGC	2 cut(s)	79, 499
HpyF3I	CTNAG	6 cut(s)	50, 96, 278, 891, 1392, 1620
HpySE526I	ACGT	2 cut(s)	402, 609
Hsp92II	CATG	9 cut(s)	184, 388, 486, 593, 996, 1085, 1331, 1512, 1610
HspAI	GCGC	3 cut(s)	437, 836, 1249
Ksp22I	TGATCA	2 cut(s)	664, 982
Kzo9I	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
LmnI	GCTCC	5 cut(s)	79, 334, 490, 675, 1292
Lsp1109I	GCAGC	5 cut(s)	238, 313, 480, 517, 1294
LweI	GCATC	4 cut(s)	238, 637, 1186, 1549
MaeI	CTAG	3 cut(s)	107, 1499, 1640
MaeII	ACGT	2 cut(s)	402, 609
MaeIII	GTNAC	4 cut(s)	389, 602, 824, 1232
MalI	GATC	6 cut(s)	45, 362, 615, 666, 984, 1086
MboI	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
MboII	GAAGA	7 cut(s)	516, 656, 701, 713, 1079, 1355, 1535
MhlI	GDGCHC	3 cut(s)	376, 566, 584
MlsI	TGGCCA	1 cut(s)	380
MluNI	TGGCCA	1 cut(s)	380
MlyI	GAGTC	2 cut(s)	260, 1169
MmeI	TCCRAC	3 cut(s)	166, 333, 1255
Mox20I	TGGCCA	1 cut(s)	380
MroXI	GAANNNNTTC	2 cut(s)	198, 1073
MscI	TGGCCA	1 cut(s)	380
MseI	TTAA	8 cut(s)	39, 66, 870, 1119, 1185, 1221, 1358, 1587
MslI	CAYNNNNRTG	4 cut(s)	628, 997, 1053, 1611
Msp20I	TGGCCA	1 cut(s)	380
MspCI	CTTAAG	1 cut(s)	1220
MspI	CCGG	4 cut(s)	449, 740, 777, 1531
MspR9I	CCNGG	4 cut(s)	333, 777, 1193, 1531
MvaI	CCWGG	2 cut(s)	333, 1193
MwoI	GCNNNNNNNGC	2 cut(s)	79, 499
NciI	CCSGG	2 cut(s)	777, 1531
NcoI	CCATGG	1 cut(s)	384
NdeII	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
NlaIII	CATG	9 cut(s)	184, 388, 486, 593, 996, 1085, 1331, 1512, 1610
NlaIV	GGNNCC	2 cut(s)	564, 1569
NmuCI	GTSAC	2 cut(s)	389, 1232
NspI	RCATGY	1 cut(s)	1512
NspV	TTCGAA	1 cut(s)	167
OliI	CACNNNNGTG	1 cut(s)	1053
PaeI	GCATGC	1 cut(s)	1512
PaeR7I	CTCGAG	1 cut(s)	74
PdmI	GAANNNNTTC	2 cut(s)	198, 1073
PfeI	GAWTC	6 cut(s)	61, 89, 164, 199, 302, 467
PfoI	TCCNGGA	1 cut(s)	1191
PkrI	GCNGC	5 cut(s)	253, 328, 495, 532, 1309
PleI	GAGTC	2 cut(s)	260, 1168
PpsI	GAGTC	2 cut(s)	260, 1168
Ppu21I	YACGTR	1 cut(s)	403
PshBI	ATTAAT	1 cut(s)	1119
Psp124BI	GAGCTC	1 cut(s)	376
Psp6I	CCWGG	2 cut(s)	331, 1191
PspFI	CCCAGC	1 cut(s)	559
PspGI	CCWGG	2 cut(s)	331, 1191
PspN4I	GGNNCC	2 cut(s)	564, 1569
PspOMI	GGGCCC	1 cut(s)	562
PspPI	GGNCC	5 cut(s)	353, 562, 563, 1284, 1568
PspXI	VCTCGAGB	1 cut(s)	74
RsaI	GTAC	3 cut(s)	29, 179, 1451
RsaNI	GTAC	3 cut(s)	28, 178, 1450
RseI	CAYNNNNRTG	4 cut(s)	628, 997, 1053, 1611
SacI	GAGCTC	1 cut(s)	376
SaqAI	TTAA	8 cut(s)	39, 66, 870, 1119, 1185, 1221, 1358, 1587
SatI	GCNGC	5 cut(s)	252, 327, 494, 531, 1308
Sau3AI	GATC	6 cut(s)	43, 360, 613, 664, 982, 1084
Sau96I	GGNCC	5 cut(s)	353, 562, 563, 1284, 1568
SchI	GAGTC	2 cut(s)	260, 1169
ScrFI	CCNGG	4 cut(s)	333, 777, 1193, 1531
SduI	GDGCHC	3 cut(s)	376, 566, 584
SfaNI	GCATC	4 cut(s)	238, 637, 1186, 1549
SfcI	CTRYAG	1 cut(s)	1011
Sfr274I	CTCGAG	1 cut(s)	74
SfuI	TTCGAA	1 cut(s)	167
SinI	GGWCC	2 cut(s)	353, 1284
SlaI	CTCGAG	1 cut(s)	74
SmiMI	CAYNNNNRTG	4 cut(s)	628, 997, 1053, 1611
SmlI	CTYRAG	3 cut(s)	74, 810, 1220
SmoI	CTYRAG	3 cut(s)	74, 810, 1220
SnaBI	TACGTA	1 cut(s)	403
SpeI	ACTAGT	1 cut(s)	106
SphI	GCATGC	1 cut(s)	1512
SsiI	CCGC	1 cut(s)	1255
SspI	AATATT	1 cut(s)	1117
SspMI	CTAG	3 cut(s)	107, 1499, 1640
SstI	GAGCTC	1 cut(s)	376
StyD4I	CCNGG	4 cut(s)	331, 775, 1191, 1529
StyI	CCWWGG	2 cut(s)	384, 1381
TaaI	ACNGT	6 cut(s)	434, 480, 755, 855, 1468, 1490
TaiI	ACGT	2 cut(s)	405, 612
TaqI	TCGA	4 cut(s)	15, 75, 167, 246
TatI	WGTACW	3 cut(s)	27, 177, 1449
TfiI	GAWTC	6 cut(s)	61, 89, 164, 199, 302, 467
Tru1I	TTAA	8 cut(s)	39, 66, 870, 1119, 1185, 1221, 1358, 1587
Tru9I	TTAA	8 cut(s)	39, 66, 870, 1119, 1185, 1221, 1358, 1587
TscAI	CASTG	2 cut(s)	732, 1641
TseFI	GTSAC	2 cut(s)	389, 1232
TseI	GCWGC	5 cut(s)	251, 326, 493, 530, 1307
Tsp45I	GTSAC	2 cut(s)	389, 1232
TspDTI	ATGAA	5 cut(s)	225, 539, 628, 981, 1473
TspGWI	ACGGA	2 cut(s)	156, 327
TspRI	CASTG	2 cut(s)	732, 1641
Vha464I	CTTAAG	1 cut(s)	1220
VneI	GTGCAC	1 cut(s)	580
VpaK11BI	GGWCC	2 cut(s)	353, 1284
VspI	ATTAAT	1 cut(s)	1119
XapI	RAATTY	2 cut(s)	635, 953
XceI	RCATGY	1 cut(s)	1512
XhoI	CTCGAG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	399
XmnI	GAANNNNTTC	2 cut(s)	198, 1073
XspI	CTAG	3 cut(s)	107, 1499, 1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.