Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001147

Physical Location & Seq

Genomic Coordinates Forward (+)

7901201 .. 7907836

Gene Structure 6636 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011239

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGCAGTCCAAGCCTGAAGACGAAGAAGAAGCTCCGATCGGAGCTCCAGCCACTCGAACGTTCTCCTTGTCGTTTGATTGTTCGCCGATCCCGAGCCTCCGCAGCCTTGCCGTCGTTGTTGTTATCATTCCGGCACTCGCTGTTATTCCTCTCACTGGATCTGCTTCAGCGTACTCGTCGAAATCACTTCGAGGAAAACAGAAAGTCAACAGCATCAACGTTAGGGACCATGGTGGCCGGAGCGCAGTCTCTAATCATTCAATCGGCTGCGAAATTCGAATTTCTGATTTGATGAGTATGGCGAGGCCGGTGCCTGAGAATCGTTCTGAGCAGGGAATTGCAAAAGCTTCGACAAGCATGTGCATTCCACAGGAGGCTCAGTGTCCTGTGAGAAAGTGGTATTTTACGAAACAGGAAATTGAAGACTCTCCATCCCGGAGGGATGGCATTAGCACGAAGAAAGAGTCGCACTTGCGGAGTTTATACTGCTCGTTTCTTCAGGAGATTGGGATGAAGCTTAAAGTGCCTCAGCTGACAATATCATCTGCAATGATGTTGTGCCACCAGTTTTATATGCGTCAATCTCACGCTAAGAATGGTTGGCAGACGGTGGCAACTGCGAGCATCTTTCTCGCATGCAAAGCAGAAGATACACCACGCTATCTGAATGATGTTGTTGTGGTGGCATATGAGATGGTGCACAAATTTGATTCATCTGCCTTGCACCGAATCAGACAAAAAGAATTTCTCAATAAGCAAAAGGAATTGATCCTAGTTGCGGAGAGACTTCTGCTGTCAACAATTGGCTTTGATCTGGACATTCAGCTTCCATACAAGATACTTGTTGCTGCTCTAAAGAGATTAGACCTTCTCCCTGACCTTGCTAAGGCAGCATGGAGTTTTGTGAACGATTGGCTTCGCACATCATTGTGCTTGCAGTACAAGCCCCATTACATTGCAGCTGGTTCAGTCGCTCTTGCTGCTAATTTTCAAAAGGTGAAACTACCTAAAGAGAAGGGAAAAGTTTGGTGGCTGGAGTTTGATGTTACGCCGAAACAGTTAGATGAGGTCATTCAGCGGATGCATAGTATGTTCAAGCCTCTACCAGCCAAAACTGGGAAGGCCGCTCAACCTGAAATTTTATCCAGAAAGCCAATTGATAGTAGCCCTCAATCATGTATTTCAAGTGAAGCAATGGTAGACCAGCATTCTAGGCATGGTGCCACTGTGGATGATAGAGGATTAGGAGGAGAGTCTGTTATGTCTACATGTAGGCAAAATCTTGGAGGTGAGAACAATCTTACTGGGAAGGATGCTTTACCATGCCAGACGAATAATAGGAGTATTGTCAAGGATAGTGGTGGTGAGATCAAGCCAATAAGAGGGGAATTGGACGATCAGAGCACAAGATGCAAGATTCTTGATGTTCCTAAAAGTTGTGGTAGGATCGATATTAACCGTATTCGAGAATTGAAGAGGAGAAGATGTGATAAAGGTGTAAATAAGAAGTTGACGGGCTCCATTACTGATGAGTTAGATCCTGAAGCCTGGATAGAAAGTGAGCTTGAAAACGGAAGTGTCGCCCATTTCGTTAGTTGGCTGTCTGCTTCAATCATAGATGATAAATGGGCTTGCACTAGGTCAACTTTTGTTTGCGGCTGGGAAGTTGGGTTTGCACTTGCAAAGTCCACTCCCTTTAATTGTTCTCGATCTTCTTCGCAATGTACATGGATCGCTGTGAAACATTTCTGGCAAGATCTTAGTGTAGTTCTGGTTGCAAAAGAGGCAAAGAATAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_N

Protein Analysis

600

Amino Acids

66.72

Weight (kDa)

9.0

Isoelectric Point (pI)

55.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	133 - 272	3.2e-15	Cyclin, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630
fragaria_vesca	FvH4_2g39390 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420
malus_domestica	MD04G1049900.v1.1 MD06G1050000.v1.1 MD08G1026200.v1.1
prunus_persica	Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1
pyrus_communis	pycom04g04390 pycom06g04230 pycom06g04240 pycom08g02030
rosa_chinensis	RchiOBHm_Chr2g0168341 RchiOBHm_Chr3g0451061 RchiOBHm_Chr6g0301611
rosa_laevigata	RLG00000011239 RLG00000021768 RLG00000025695
rosa_multiflora	Rmu_co8487951.1_g000001 Rmu_sc0000078.1_g000004 Rmu_sc0016462.1_g000004 Rmu_ssc0000452.1_g000012
rosa_roxburghii	Rroxscaffold_2G00083130 Rroxscaffold_7G00166600
rosa_rugosa	Rorug02G0532800 Rorug02G0532900 Rorug02G0533000 Rorug02G0533000 Rorug02G0630800 Rorug06G0307200 Rorug06G0307300
rosa_samantha	Rh2AG602100 Rh2BG615400 Rh2CG583100 Rh2DG625600 Rh3AG033200 Rh3BG033500 Rh3CG032200 Rh3DG033200 Rh6AG420100 Rh6BG426200 Rh6CG433100 Rh6DG419500
rosa_wichuraiana	Rw0G019830 Rw2G049980 Rw3G002440 Rw6G036320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	310, 1220
AccBSI	CCGCTC	1 cut(s)	1127
AccI	GTMKAC	2 cut(s)	1200, 1265
AciI	CCGC	6 cut(s)	100, 475, 779, 1078, 1125, 1656
AclI	AACGTT	2 cut(s)	59, 219
AclWI	GGATC	6 cut(s)	82, 166, 763, 1454, 1532, 1739
AcoI	YGGCCR	1 cut(s)	235
AcsI	RAATTY	5 cut(s)	273, 279, 704, 743, 1137
AcuI	CTGAAG	4 cut(s)	36, 150, 482, 1563
AfaI	GTAC	3 cut(s)	173, 941, 1726
AfiI	CCNNNNNNNGG	5 cut(s)	155, 778, 886, 1116, 1382
AflIII	ACRYGT	1 cut(s)	1268
AgsI	TTSAA	8 cut(s)	261, 422, 992, 1096, 1185, 1474, 1568, 1611
AjnI	CCWGG	1 cut(s)	1547
AluBI	AGCT	8 cut(s)	32, 44, 347, 517, 532, 826, 962, 1564
AluI	AGCT	8 cut(s)	32, 44, 347, 517, 532, 826, 962, 1564
Alw21I	GWGCWC	3 cut(s)	46, 702, 1406
Alw26I	GTCTC	2 cut(s)	253, 778
Alw44I	GTGCAC	1 cut(s)	698
AlwI	GGATC	6 cut(s)	82, 166, 763, 1454, 1532, 1739
Ama87I	CYCGRG	1 cut(s)	91
AoxI	GGCC	3 cut(s)	235, 305, 1122
ApaLI	GTGCAC	1 cut(s)	698
ApeKI	GCWGC	6 cut(s)	102, 267, 848, 890, 959, 980
ApoI	RAATTY	5 cut(s)	273, 279, 704, 743, 1137
ArsI	GACNNNNNNTTYG	2 cut(s)	449, 481
Asp700I	GAANNNNTTC	1 cut(s)	1745
AspLEI	GCGC	1 cut(s)	245
AspS9I	GGNCC	1 cut(s)	226
AsuC2I	CCSGG	1 cut(s)	436
AsuHPI	GGTGA	3 cut(s)	1009, 1301, 1376
AsuII	TTCGAA	1 cut(s)	277
AvaI	CYCGRG	1 cut(s)	91
AvaII	GGWCC	1 cut(s)	226
BaeGI	GKGCMC	1 cut(s)	702
BanI	GGYRCC	2 cut(s)	310, 1220
BanII	GRGCYC	2 cut(s)	46, 1520
BbsI	GAAGAC	2 cut(s)	24, 429
Bbv12I	GWGCWC	3 cut(s)	46, 702, 1406
BbvCI	CCTCAGC	1 cut(s)	528
BbvI	GCAGC	6 cut(s)	114, 254, 835, 902, 967, 971
BccI	CCATC	3 cut(s)	437, 439, 688
BceAI	ACGGC	1 cut(s)	95
BcgI	CGANNNNNNTGC	6 cut(s)	292, 326, 330, 364, 613, 647
BciT130I	CCWGG	1 cut(s)	1549
BcnI	CCSGG	1 cut(s)	436
BcoDI	GTCTC	2 cut(s)	253, 778
BfaI	CTAG	3 cut(s)	773, 1212, 1638
BglII	AGATCT	1 cut(s)	1756
BisI	GCNGC	8 cut(s)	103, 268, 849, 891, 960, 981, 1125, 1657
BlsI	GCNGC	8 cut(s)	104, 269, 850, 892, 961, 982, 1126, 1658
Bme1390I	CCNGG	2 cut(s)	436, 1549
Bme18I	GGWCC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	91
BmgT120I	GGNCC	1 cut(s)	226
BmiI	GGNNCC	4 cut(s)	227, 312, 1222, 1519
BmrFI	CCNGG	2 cut(s)	436, 1549
BmrI	ACTGGG	2 cut(s)	1125, 1314
BmsI	GCATC	5 cut(s)	222, 633, 1071, 1303, 1400
BmuI	ACTGGG	2 cut(s)	1125, 1314
BpiI	GAAGAC	2 cut(s)	24, 429
BpmI	CTGGAG	2 cut(s)	30, 1055
Bpu10I	CCTNAGC	2 cut(s)	528, 885
Bpu14I	TTCGAA	1 cut(s)	277
BpuMI	CCSGG	1 cut(s)	436
Bsa29I	ATCGAT	1 cut(s)	1449
BsaJI	CCNNGG	1 cut(s)	229
BsaXI	ACNNNNNCTCC	6 cut(s)	365, 395, 1242, 1272, 1471, 1501
Bsc4I	CCNNNNNNNGG	5 cut(s)	155, 778, 886, 1116, 1382
Bse118I	RCCGGY	1 cut(s)	307
Bse1I	ACTGG	4 cut(s)	160, 565, 1120, 1309
Bse3DI	GCAATG	4 cut(s)	555, 954, 1200, 1727
BseBI	CCWGG	1 cut(s)	1549
BseCI	ATCGAT	1 cut(s)	1449
BseDI	CCNNGG	1 cut(s)	229
BseGI	GGATG	6 cut(s)	431, 448, 516, 1086, 1237, 1318
BseLI	CCNNNNNNNGG	5 cut(s)	155, 778, 886, 1116, 1382
BseMI	GCAATG	4 cut(s)	555, 954, 1200, 1727
BseMII	CTCAG	4 cut(s)	306, 318, 392, 542
BseNI	ACTGG	4 cut(s)	160, 565, 1120, 1309
BseRI	GAGGAG	2 cut(s)	1263, 1492
BseSI	GKGCMC	1 cut(s)	702
BseXI	GCAGC	6 cut(s)	114, 254, 835, 902, 967, 971
BseYI	CCCAGC	1 cut(s)	1659
Bsh1285I	CGRYCG	1 cut(s)	39
BshFI	GGCC	3 cut(s)	237, 307, 1124
BshNI	GGYRCC	2 cut(s)	310, 1220
BshVI	ATCGAT	1 cut(s)	1449
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	3 cut(s)	46, 702, 1406
BsiHKCI	CYCGRG	1 cut(s)	91
BsiSI	CCGG	4 cut(s)	131, 238, 308, 436
BslFI	GGGAC	1 cut(s)	239
BslI	CCNNNNNNNGG	5 cut(s)	155, 778, 886, 1116, 1382
BsmAI	GTCTC	2 cut(s)	253, 778
BsmFI	GGGAC	1 cut(s)	239
BsmI	GAATGC	2 cut(s)	363, 1207
BsnI	GGCC	3 cut(s)	237, 307, 1124
BsoBI	CYCGRG	1 cut(s)	91
Bsp119I	TTCGAA	1 cut(s)	277
Bsp1286I	GDGCHC	4 cut(s)	46, 702, 1406, 1520
Bsp1407I	TGTACA	1 cut(s)	1724
Bsp19I	CCATGG	1 cut(s)	229
BspACI	CCGC	6 cut(s)	100, 475, 779, 1078, 1125, 1656
BspANI	GGCC	3 cut(s)	237, 307, 1124
BspCNI	CTCAG	4 cut(s)	307, 319, 391, 541
BspDI	ATCGAT	1 cut(s)	1449
BspLI	GGNNCC	4 cut(s)	227, 312, 1222, 1519
BspPI	GGATC	6 cut(s)	82, 166, 763, 1454, 1532, 1739
BspT104I	TTCGAA	1 cut(s)	277
BspT107I	GGYRCC	2 cut(s)	310, 1220
BsrBI	CCGCTC	1 cut(s)	1127
BsrDI	GCAATG	4 cut(s)	555, 954, 1200, 1727
BsrFI	RCCGGY	1 cut(s)	307
BsrGI	TGTACA	1 cut(s)	1724
BsrI	ACTGG	4 cut(s)	160, 565, 1120, 1309
BssAI	RCCGGY	1 cut(s)	307
BssECI	CCNNGG	1 cut(s)	229
BssT1I	CCWWGG	1 cut(s)	229
Bst2UI	CCWGG	1 cut(s)	1549
Bst4CI	ACNGT	4 cut(s)	610, 1059, 1228, 1460
Bst6I	CTCTTC	1 cut(s)	1469
BstAPI	GCANNNNNTGC	1 cut(s)	1410
BstAUI	TGTACA	1 cut(s)	1724
BstBI	TTCGAA	1 cut(s)	277
BstC8I	GCNNGC	4 cut(s)	622, 637, 935, 1633
BstDEI	CTNAG	7 cut(s)	315, 327, 378, 528, 591, 885, 1760
BstDSI	CCRYGG	1 cut(s)	229
BstENI	CCTNNNNNAGG	1 cut(s)	884
BstF5I	GGATG	6 cut(s)	431, 448, 516, 1086, 1237, 1318
BstHHI	GCGC	1 cut(s)	245
BstMAI	GTCTC	2 cut(s)	253, 778
BstMCI	CGRYCG	1 cut(s)	39
BstNI	CCWGG	1 cut(s)	1549
BstNSI	RCATGY	3 cut(s)	361, 639, 1272
BstSCI	CCNGG	2 cut(s)	434, 1547
BstSLI	GKGCMC	1 cut(s)	702
BstV1I	GCAGC	6 cut(s)	114, 254, 835, 902, 967, 971
BstV2I	GAAGAC	2 cut(s)	24, 429
BstX2I	RGATCY	3 cut(s)	158, 1537, 1756
BstYI	RGATCY	3 cut(s)	158, 1537, 1756
Bsu15I	ATCGAT	1 cut(s)	1449
BsuRI	GGCC	3 cut(s)	237, 307, 1124
BsuTUI	ATCGAT	1 cut(s)	1449
BtgI	CCRYGG	1 cut(s)	229
BtsCI	GGATG	6 cut(s)	431, 448, 516, 1086, 1237, 1318
BtsIMutI	CAGTG	3 cut(s)	153, 386, 1224
Cac8I	GCNNGC	4 cut(s)	622, 637, 935, 1633
CfoI	GCGC	1 cut(s)	245
Cfr10I	RCCGGY	1 cut(s)	307
Cfr13I	GGNCC	1 cut(s)	226
ClaI	ATCGAT	1 cut(s)	1449
CseI	GACGC	1 cut(s)	566
Csp6I	GTAC	3 cut(s)	172, 940, 1725
CspCI	CAANNNNNGTGG	2 cut(s)	1339, 1374
CviAII	CATG	9 cut(s)	230, 358, 636, 894, 1176, 1217, 1269, 1323, 1728
CviQI	GTAC	3 cut(s)	172, 940, 1725
DdeI	CTNAG	7 cut(s)	315, 327, 378, 528, 591, 885, 1760
EaeI	YGGCCR	1 cut(s)	235
Eam1104I	CTCTTC	1 cut(s)	1469
EarI	CTCTTC	1 cut(s)	1469
Ecl136II	GAGCTC	1 cut(s)	44
Eco130I	CCWWGG	1 cut(s)	229
Eco24I	GRGCYC	2 cut(s)	46, 1520
Eco47I	GGWCC	1 cut(s)	226
Eco53kI	GAGCTC	1 cut(s)	44
Eco57I	CTGAAG	4 cut(s)	36, 150, 482, 1563
Eco88I	CYCGRG	1 cut(s)	91
EcoICRI	GAGCTC	1 cut(s)	44
EcoNI	CCTNNNNNAGG	1 cut(s)	884
EcoRII	CCWGG	1 cut(s)	1547
EcoT14I	CCWWGG	1 cut(s)	229
EcoT22I	ATGCAT	1 cut(s)	1086
EcoT38I	GRGCYC	2 cut(s)	46, 1520
ErhI	CCWWGG	1 cut(s)	229
FaeI	CATG	9 cut(s)	233, 361, 639, 897, 1179, 1220, 1272, 1326, 1731
FaqI	GGGAC	1 cut(s)	239
FatI	CATG	9 cut(s)	229, 357, 635, 893, 1175, 1216, 1268, 1322, 1727
FauNDI	CATATG	1 cut(s)	688
FblI	GTMKAC	2 cut(s)	1200, 1265
Fnu4HI	GCNGC	8 cut(s)	103, 268, 849, 891, 960, 981, 1125, 1657
FokI	GGATG	6 cut(s)	418, 455, 523, 1093, 1244, 1325
FriOI	GRGCYC	2 cut(s)	46, 1520
Fsp4HI	GCNGC	8 cut(s)	103, 268, 849, 891, 960, 981, 1125, 1657
FspBI	CTAG	3 cut(s)	773, 1212, 1638
GlaI	GCGC	1 cut(s)	244
GluI	GCNGC	8 cut(s)	103, 268, 849, 891, 960, 981, 1125, 1657
GsaI	CCCAGC	1 cut(s)	1663
GsuI	CTGGAG	2 cut(s)	30, 1055
HaeIII	GGCC	3 cut(s)	237, 307, 1124
HapII	CCGG	4 cut(s)	131, 238, 308, 436
HgaI	GACGC	1 cut(s)	566
HhaI	GCGC	1 cut(s)	245
Hin1II	CATG	9 cut(s)	233, 361, 639, 897, 1179, 1220, 1272, 1326, 1731
Hin6I	GCGC	1 cut(s)	243
HinP1I	GCGC	1 cut(s)	243
HincII	GTYRAC	4 cut(s)	208, 798, 1512, 1644
HindII	GTYRAC	4 cut(s)	208, 798, 1512, 1644
HindIII	AAGCTT	2 cut(s)	345, 515
HinfI	GANTC	7 cut(s)	319, 425, 464, 710, 729, 1253, 1417
HpaII	CCGG	4 cut(s)	131, 238, 308, 436
HphI	GGTGA	3 cut(s)	1009, 1301, 1376
Hpy166II	GTNNAC	9 cut(s)	208, 700, 798, 907, 1201, 1266, 1512, 1644, 1689
Hpy188I	TCNGA	7 cut(s)	36, 41, 286, 328, 666, 734, 1401
Hpy188III	TCNNGA	8 cut(s)	91, 500, 815, 1146, 1421, 1466, 1541, 1707
Hpy8I	GTNNAC	9 cut(s)	208, 700, 798, 907, 1201, 1266, 1512, 1644, 1689
Hpy99I	CGWCG	2 cut(s)	116, 181
HpyAV	CCTTC	4 cut(s)	878, 1009, 1114, 1303
HpyCH4III	ACNGT	4 cut(s)	610, 1059, 1228, 1460
HpyCH4IV	ACGT	2 cut(s)	59, 219
HpyF3I	CTNAG	7 cut(s)	315, 327, 378, 528, 591, 885, 1760
HpySE526I	ACGT	2 cut(s)	59, 219
Hsp92II	CATG	9 cut(s)	233, 361, 639, 897, 1179, 1220, 1272, 1326, 1731
HspAI	GCGC	1 cut(s)	243
LmnI	GCTCC	5 cut(s)	37, 41, 49, 240, 1523
Lsp1109I	GCAGC	6 cut(s)	114, 254, 835, 902, 967, 971
LweI	GCATC	5 cut(s)	222, 633, 1071, 1303, 1400
MaeI	CTAG	3 cut(s)	773, 1212, 1638
MaeII	ACGT	2 cut(s)	59, 219
MaeIII	GTNAC	1 cut(s)	1045
MbiI	CCGCTC	1 cut(s)	1127
MfeI	CAATTG	2 cut(s)	801, 1155
MflI	RGATCY	3 cut(s)	158, 1537, 1756
MhlI	GDGCHC	4 cut(s)	46, 702, 1406, 1520
MlyI	GAGTC	3 cut(s)	419, 473, 1262
Mph1103I	ATGCAT	1 cut(s)	1086
MroXI	GAANNNNTTC	1 cut(s)	1745
MseI	TTAA	3 cut(s)	519, 1455, 1698
MslI	CAYNNNNRTG	1 cut(s)	928
MspA1I	CMGCKG	3 cut(s)	532, 962, 1078
MspI	CCGG	4 cut(s)	131, 238, 308, 436
MspR9I	CCNGG	2 cut(s)	436, 1549
MunI	CAATTG	2 cut(s)	801, 1155
Mva1269I	GAATGC	2 cut(s)	363, 1207
MvaI	CCWGG	1 cut(s)	1549
NciI	CCSGG	1 cut(s)	436
NcoI	CCATGG	1 cut(s)	229
NdeI	CATATG	1 cut(s)	688
NlaIII	CATG	9 cut(s)	233, 361, 639, 897, 1179, 1220, 1272, 1326, 1731
NlaIV	GGNNCC	4 cut(s)	227, 312, 1222, 1519
NsiI	ATGCAT	1 cut(s)	1086
NspI	RCATGY	3 cut(s)	361, 639, 1272
NspV	TTCGAA	1 cut(s)	277
PaeI	GCATGC	1 cut(s)	639
PciI	ACATGT	1 cut(s)	1268
PcsI	WCGNNNNNNNCGW	2 cut(s)	89, 1587
PctI	GAATGC	2 cut(s)	363, 1207
PdmI	GAANNNNTTC	1 cut(s)	1745
PfeI	GAWTC	4 cut(s)	319, 710, 729, 1417
PfoI	TCCNGGA	1 cut(s)	434
PkrI	GCNGC	8 cut(s)	104, 269, 850, 892, 961, 982, 1126, 1658
Ple19I	CGATCG	1 cut(s)	39
PleI	GAGTC	3 cut(s)	419, 472, 1261
PpsI	GAGTC	3 cut(s)	419, 472, 1261
PscI	ACATGT	1 cut(s)	1268
Psp124BI	GAGCTC	1 cut(s)	46
Psp1406I	AACGTT	2 cut(s)	59, 219
Psp6I	CCWGG	1 cut(s)	1547
PspFI	CCCAGC	1 cut(s)	1659
PspGI	CCWGG	1 cut(s)	1547
PspN4I	GGNNCC	4 cut(s)	227, 312, 1222, 1519
PspPI	GGNCC	1 cut(s)	226
PsuI	RGATCY	3 cut(s)	158, 1537, 1756
PvuI	CGATCG	1 cut(s)	39
PvuII	CAGCTG	2 cut(s)	532, 962
RsaI	GTAC	3 cut(s)	173, 941, 1726
RsaNI	GTAC	3 cut(s)	172, 940, 1725
RseI	CAYNNNNRTG	1 cut(s)	928
SacI	GAGCTC	1 cut(s)	46
SaqAI	TTAA	3 cut(s)	519, 1455, 1698
SatI	GCNGC	8 cut(s)	103, 268, 849, 891, 960, 981, 1125, 1657
Sau96I	GGNCC	1 cut(s)	226
SchI	GAGTC	3 cut(s)	419, 473, 1262
ScrFI	CCNGG	2 cut(s)	436, 1549
SduI	GDGCHC	4 cut(s)	46, 702, 1406, 1520
SfaNI	GCATC	5 cut(s)	222, 633, 1071, 1303, 1400
SfuI	TTCGAA	1 cut(s)	277
SinI	GGWCC	1 cut(s)	226
SmiMI	CAYNNNNRTG	1 cut(s)	928
SphI	GCATGC	1 cut(s)	639
SsiI	CCGC	6 cut(s)	100, 475, 779, 1078, 1125, 1656
SspMI	CTAG	3 cut(s)	773, 1212, 1638
SstI	GAGCTC	1 cut(s)	46
StyD4I	CCNGG	2 cut(s)	434, 1547
StyI	CCWWGG	1 cut(s)	229
TaaI	ACNGT	4 cut(s)	610, 1059, 1228, 1460
TaiI	ACGT	2 cut(s)	62, 222
TaqI	TCGA	8 cut(s)	55, 179, 190, 277, 350, 1449, 1465, 1708
TatI	WGTACW	2 cut(s)	939, 1724
TauI	GCSGC	2 cut(s)	1127, 1659
TfiI	GAWTC	4 cut(s)	319, 710, 729, 1417
Tru1I	TTAA	3 cut(s)	519, 1455, 1698
Tru9I	TTAA	3 cut(s)	519, 1455, 1698
TscAI	CASTG	3 cut(s)	160, 386, 1231
TseI	GCWGC	6 cut(s)	102, 267, 848, 890, 959, 980
TspDTI	ATGAA	2 cut(s)	527, 702
TspGWI	ACGGA	1 cut(s)	1587
TspRI	CASTG	3 cut(s)	160, 386, 1231
VneI	GTGCAC	1 cut(s)	698
VpaK11BI	GGWCC	1 cut(s)	226
XagI	CCTNNNNNAGG	1 cut(s)	884
XapI	RAATTY	5 cut(s)	273, 279, 704, 743, 1137
XceI	RCATGY	3 cut(s)	361, 639, 1272
XmiI	GTMKAC	2 cut(s)	1200, 1265
XmnI	GAANNNNTTC	1 cut(s)	1745
XspI	CTAG	3 cut(s)	773, 1212, 1638
Zsp2I	ATGCAT	1 cut(s)	1086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.