Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001147

Physical Location & Seq

Genomic Coordinates Reverse (-)

45827049 .. 45829771

Gene Structure 2723 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0307300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGAGAAAGTCTTCAATCTCACTCTTCTCCCATCTCAGTCGTCGGAGTTCCAAATCCTTTGCTCCTCTTGTATCCAGAAATTACATTTCTGACCCTCTCTCTTCCTCTTCATCTTCTTCTTCTTCGCCGACCCGGTTCAGGTCCTGCACCAAACTCCATGGCTTGTTCTTCAAAAACACCCAATTCCAAGCAAACCCATCTCGAAACATGGACACCCTCGCCCCTCAAATGTCCTCAAGGCAGAGAAAAACCAAGGAAAGGTCCGAGCTTGAAGACGCATTTGAATCAGCGACTACTTCCGAAGAGATGCGTAGGGCTTTCAAGGAAATGGAGTCGGTTTTCGGAGAGAAAGAGCTGGCCTTGGCTTGTTTGAAACTTGGGCTCAAGCTTGACCAAGAAGGTGAGGACCCTGAACAGACTCTCTCTTTTGCTACTAGGGCCTTTAATGCTTTTGATAAACAAGATGATGATAGGGATAGTAGTAGTGGTAATAAGCCTTCGTTTCTTGTTGCAATGGCTTTACAATTGATGGGTTCTGCGAATTATAGCTTGAAAAGGTTTAATGATAGTTTGGGGTATCTGAATAGGGCTAATAGGATGTTGGGTAGGTTAGAGGAGGAGGGTTGTAATGTTGGGGATATTAGGCCGGTGCTTCATGCCGTGCAGTTGGAGTTGGCGAATGTGAAGACGGCGATGGGGAGGAGAGAGGAGGCTCTTGAGAATCTGAGGAAGTGTTTGGAGATTAAGGAGGTGATGTTGGAGAAAGATAGTAAGGAACTTGGCAAGGCCAACCGGGACTTGGCTGAGGCTTATGTTGCGGTTTTGAACTTTAAGGAGGCGTTGGGATTCTGTAGGAAGGCATTGGAGATTCATAAAGAACAGTTGGGGCAGAATTCAGTGGAGGTTGCACATGACAGGAGGCTTCTTGGGGTTATTTATACCGGGTTGGAGGAGCATGAGAAGGCCTTGGAGCAAAACATGTTGTCACAGAAGGTTTTGAAGAATTGGGGTCTTGGTTCTGATCTGCTTCGTGCGGAGATTGATTCTGCGAATATGCAGATTGCACTGGGGAAGTATGATGACGCTATTAATACTTTGAAGGGTGTTGTTCAGCAAACGGATAAGGATAGTGAGACAAGGGCACTAGTGTTTATCTCGATGGGAAAAGCATTATGTAATCAGGAAAAGCTTTCGGATGCAAAGAGATGTTTGGAGATTGCTTGTGGAATTCTTGACAAGAAAGAGAGAGCCGCCCCGGTAGATGTTGCCGAGGCATACTCAGAAATATCAATGCAATACGAGACAATGAACGAGTTTGAAACGGCAATTTCACTGTTAAAGAGGACATTGGCATTGCTTGAGAAGCTCCCTCAAGAACAACATTCTGAGGGAAGTGTTTCTGCTAGGATAGGGTGGTTACTTCTGTTGACTGGCAAGGTCTCACAGGCTATTCCGTACTTGGAGAGTGCAGCTGAGAGATTGAAAGAGAGCTTTGGGCCCAAGCATTTTGGTGTGGGGTATATTTACAACAACTTGGGGGCAGCATATTTGGAACTAGACCGGCCTCAGTCAGCTGCACAGATGTTTGCTGTCGCAAAGGACATCATGGATGTCGCACTCGGTCCACATCATGCAGATTCAATTGAGGCATGCCAGAACGTCTCAAAAGCATATGATGCCATGAAAAGCTATGCCCTTGCAATCCAATTCCAGCAGCAAGTAGTTGATGCTTGGGAGAACCATGGACCAAGTGCTCATGACGAACTCAGAGAAGCACAGCGACTTCTTGAAGAGTTGAGGAAAAAAGCCCGTGGGACATTCTTAAATGATGAGCGAACCATCAAGGCCTTGCCCTTGCCCCAAACTCATCCATCTGCCAGGAGCTCACAAGCTGACTTCCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_N

Protein Analysis

634

Amino Acids

70.87

Weight (kDa)

6.2

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	221 - 281	9.3e-06	Tetratricopeptide repeat
TPR_NPHP3	PF24885	230 - 325	2e-10	Nephrocystin-3 TPR domain
TPR_12	PF13424	263 - 325	1.1e-07	Tetratricopeptide repeat
TPR_12	PF13424	421 - 495	3.9e-06	Tetratricopeptide repeat
TPR_12	PF13424	474 - 535	3.9e-09	Tetratricopeptide repeat
TPR_12	PF13424	508 - 579	2.3e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630
fragaria_vesca	FvH4_2g39390 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420
malus_domestica	MD04G1049900.v1.1 MD06G1050000.v1.1 MD08G1026200.v1.1
prunus_persica	Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1
pyrus_communis	pycom04g04390 pycom06g04230 pycom06g04240 pycom08g02030
rosa_chinensis	RchiOBHm_Chr2g0168341 RchiOBHm_Chr3g0451061 RchiOBHm_Chr6g0301611
rosa_laevigata	RLG00000011239 RLG00000021768 RLG00000025695
rosa_multiflora	Rmu_co8487951.1_g000001 Rmu_sc0000078.1_g000004 Rmu_sc0016462.1_g000004 Rmu_ssc0000452.1_g000012
rosa_roxburghii	Rroxscaffold_2G00083130 Rroxscaffold_7G00166600
rosa_rugosa	Rorug02G0532800 Rorug02G0532900 Rorug02G0533000 Rorug02G0533000 Rorug02G0630800 Rorug06G0307200 Rorug06G0307300
rosa_samantha	Rh2AG602100 Rh2BG615400 Rh2CG583100 Rh2DG625600 Rh3AG033200 Rh3BG033500 Rh3CG032200 Rh3DG033200 Rh6AG420100 Rh6BG426200 Rh6CG433100 Rh6DG419500
rosa_wichuraiana	Rw0G019830 Rw2G049980 Rw3G002440 Rw6G036320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	818, 1034, 1251
AcsI	RAATTY	2 cut(s)	892, 1227
AfaI	GTAC	1 cut(s)	1457
AfiI	CCNNNNNNNGG	3 cut(s)	138, 258, 799
AflIII	ACRYGT	1 cut(s)	978
AhlI	ACTAGT	1 cut(s)	1144
AjnI	CCWGG	1 cut(s)	1877
Alw21I	GWGCWC	2 cut(s)	1756, 1886
Alw26I	GTCTC	4 cut(s)	1127, 1295, 1444, 1666
AlwNI	CAGNNNCTG	1 cut(s)	144
AoxI	GGCC	8 cut(s)	357, 438, 644, 786, 963, 1496, 1562, 1845
ApaI	GGGCCC	1 cut(s)	1500
ApeKI	GCWGC	4 cut(s)	1469, 1541, 1574, 1714
ApoI	RAATTY	2 cut(s)	892, 1227
AseI	ATTAAT	1 cut(s)	1089
Asp700I	GAANNNNTTC	2 cut(s)	10, 1396
AspS9I	GGNCC	8 cut(s)	141, 261, 406, 438, 1496, 1497, 1622, 1745
AsuC2I	CCSGG	4 cut(s)	133, 794, 943, 1256
AsuHPI	GGTGA	2 cut(s)	413, 763
AvaII	GGWCC	5 cut(s)	141, 261, 406, 1622, 1745
BaeGI	GKGCMC	2 cut(s)	1144, 1500
BanII	GRGCYC	3 cut(s)	384, 1500, 1886
BarI	GAAGNNNNNNTAC	2 cut(s)	481, 513
BbsI	GAAGAC	3 cut(s)	3, 279, 692
Bbv12I	GWGCWC	2 cut(s)	1756, 1886
BbvCI	CCTCAGC	1 cut(s)	804
BbvI	GCAGC	4 cut(s)	1481, 1553, 1561, 1726
BccI	CCATC	7 cut(s)	39, 205, 523, 688, 1153, 1847, 1879
BceAI	ACGGC	3 cut(s)	644, 705, 1338
BciT130I	CCWGG	1 cut(s)	1879
BciVI	GTATCC	1 cut(s)	82
BcnI	CCSGG	4 cut(s)	133, 794, 943, 1256
BcoDI	GTCTC	4 cut(s)	1127, 1295, 1444, 1666
BcuI	ACTAGT	1 cut(s)	1144
BfaI	CTAG	4 cut(s)	435, 1145, 1404, 1556
BfmI	CTRYAG	1 cut(s)	850
BfuI	GTATCC	1 cut(s)	82
BisI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
BlsI	GCNGC	5 cut(s)	1252, 1471, 1543, 1576, 1716
Bme1390I	CCNGG	5 cut(s)	133, 794, 943, 1256, 1879
Bme18I	GGWCC	5 cut(s)	141, 261, 406, 1622, 1745
BmgT120I	GGNCC	8 cut(s)	141, 261, 406, 438, 1496, 1497, 1622, 1745
BmiI	GGNNCC	2 cut(s)	408, 1498
BmrFI	CCNGG	5 cut(s)	133, 794, 943, 1256, 1879
BmrI	ACTGGG	1 cut(s)	1076
BmsI	GCATC	4 cut(s)	297, 1186, 1666, 1717
BmuI	ACTGGG	1 cut(s)	1076
BpiI	GAAGAC	3 cut(s)	3, 279, 692
BplI	GAGNNNNNCTC	2 cut(s)	1262, 1294
Bpu10I	CCTNAGC	1 cut(s)	804
BpuEI	CTTGAG	5 cut(s)	220, 368, 737, 1356, 1379
BpuMI	CCSGG	4 cut(s)	133, 794, 943, 1256
BsaI	GGTCTC	1 cut(s)	1444
BsaJI	CCNNGG	8 cut(s)	157, 252, 360, 966, 1254, 1269, 1741, 1810
BsaXI	ACNNNNNCTCC	2 cut(s)	740, 770
Bsc4I	CCNNNNNNNGG	3 cut(s)	138, 258, 799
Bse118I	RCCGGY	2 cut(s)	646, 1560
Bse1I	ACTGG	2 cut(s)	1071, 1435
Bse3DI	GCAATG	2 cut(s)	519, 1352
BseBI	CCWGG	1 cut(s)	1879
BseDI	CCNNGG	8 cut(s)	157, 252, 360, 966, 1254, 1269, 1741, 1810
BseGI	GGATG	4 cut(s)	603, 1201, 1615, 1867
BseLI	CCNNNNNNNGG	3 cut(s)	138, 258, 799
BseMI	GCAATG	2 cut(s)	519, 1352
BseMII	CTCAG	8 cut(s)	49, 716, 795, 1293, 1377, 1464, 1580, 1780
BseNI	ACTGG	2 cut(s)	1071, 1435
BseRI	GAGGAG	6 cut(s)	54, 629, 632, 715, 722, 965
BseSI	GKGCMC	2 cut(s)	1144, 1500
BseXI	GCAGC	4 cut(s)	1481, 1553, 1561, 1726
BsgI	GTGCAG	4 cut(s)	130, 683, 1488, 1560
BshFI	GGCC	8 cut(s)	359, 440, 646, 788, 965, 1498, 1564, 1847
BsiHKAI	GWGCWC	2 cut(s)	1756, 1886
BsiSI	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
BslFI	GGGAC	2 cut(s)	809, 1828
BslI	CCNNNNNNNGG	3 cut(s)	138, 258, 799
BsmAI	GTCTC	4 cut(s)	1127, 1295, 1444, 1666
BsmBI	CGTCTC	1 cut(s)	1666
BsmFI	GGGAC	2 cut(s)	809, 1828
BsnI	GGCC	8 cut(s)	359, 440, 646, 788, 965, 1498, 1564, 1847
Bso31I	GGTCTC	1 cut(s)	1444
Bsp120I	GGGCCC	1 cut(s)	1496
Bsp1286I	GDGCHC	5 cut(s)	384, 1144, 1500, 1756, 1886
Bsp143I	GATC	1 cut(s)	1021
Bsp19I	CCATGG	2 cut(s)	157, 1741
BspACI	CCGC	3 cut(s)	818, 1034, 1251
BspANI	GGCC	8 cut(s)	359, 440, 646, 788, 965, 1498, 1564, 1847
BspCNI	CTCAG	8 cut(s)	48, 717, 796, 1292, 1378, 1465, 1579, 1779
BspHI	TCATGA	1 cut(s)	1756
BspLI	GGNNCC	2 cut(s)	408, 1498
BspTNI	GGTCTC	1 cut(s)	1444
BsrDI	GCAATG	2 cut(s)	519, 1352
BsrFI	RCCGGY	2 cut(s)	646, 1560
BsrI	ACTGG	2 cut(s)	1071, 1435
BssAI	RCCGGY	2 cut(s)	646, 1560
BssECI	CCNNGG	8 cut(s)	157, 252, 360, 966, 1254, 1269, 1741, 1810
BssMI	GATC	1 cut(s)	1021
BssT1I	CCWWGG	5 cut(s)	157, 252, 360, 966, 1741
Bst2UI	CCWGG	1 cut(s)	1879
Bst4CI	ACNGT	2 cut(s)	882, 1335
Bst6I	CTCTTC	5 cut(s)	29, 106, 112, 297, 1785
BstAPI	GCANNNNNTGC	1 cut(s)	1676
BstC8I	GCNNGC	2 cut(s)	357, 1651
BstDEI	CTNAG	8 cut(s)	35, 725, 804, 1279, 1386, 1473, 1566, 1766
BstDSI	CCRYGG	3 cut(s)	157, 1741, 1810
BstF5I	GGATG	4 cut(s)	603, 1201, 1615, 1867
BstKTI	GATC	1 cut(s)	1024
BstMAI	GTCTC	4 cut(s)	1127, 1295, 1444, 1666
BstMBI	GATC	1 cut(s)	1021
BstMWI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
BstNI	CCWGG	1 cut(s)	1879
BstNSI	RCATGY	2 cut(s)	982, 1653
BstSCI	CCNGG	5 cut(s)	131, 792, 941, 1254, 1877
BstSFI	CTRYAG	1 cut(s)	850
BstSLI	GKGCMC	2 cut(s)	1144, 1500
BstV1I	GCAGC	4 cut(s)	1481, 1553, 1561, 1726
BstV2I	GAAGAC	3 cut(s)	3, 279, 692
BsuI	GTATCC	1 cut(s)	82
BsuRI	GGCC	8 cut(s)	359, 440, 646, 788, 965, 1498, 1564, 1847
BtgI	CCRYGG	3 cut(s)	157, 1741, 1810
BtgZI	GCGATG	1 cut(s)	707
BtsCI	GGATG	4 cut(s)	603, 1201, 1615, 1867
BtsIMutI	CAGTG	3 cut(s)	903, 1064, 1331
Cac8I	GCNNGC	2 cut(s)	357, 1651
CaiI	CAGNNNCTG	1 cut(s)	144
CciI	TCATGA	1 cut(s)	1756
Cfr10I	RCCGGY	2 cut(s)	646, 1560
Cfr13I	GGNCC	8 cut(s)	141, 261, 406, 438, 1496, 1497, 1622, 1745
CseI	GACGC	2 cut(s)	284, 1091
Csp6I	GTAC	1 cut(s)	1456
CviQI	GTAC	1 cut(s)	1456
DdeI	CTNAG	8 cut(s)	35, 725, 804, 1279, 1386, 1473, 1566, 1766
DpnI	GATC	1 cut(s)	1023
DpnII	GATC	1 cut(s)	1021
Eam1104I	CTCTTC	5 cut(s)	29, 106, 112, 297, 1785
EarI	CTCTTC	5 cut(s)	29, 106, 112, 297, 1785
Ecl136II	GAGCTC	1 cut(s)	1884
Eco130I	CCWWGG	5 cut(s)	157, 252, 360, 966, 1741
Eco147I	AGGCCT	2 cut(s)	965, 1847
Eco24I	GRGCYC	3 cut(s)	384, 1500, 1886
Eco31I	GGTCTC	1 cut(s)	1444
Eco47I	GGWCC	5 cut(s)	141, 261, 406, 1622, 1745
Eco53kI	GAGCTC	1 cut(s)	1884
EcoICRI	GAGCTC	1 cut(s)	1884
EcoO109I	RGGNCCY	3 cut(s)	141, 406, 438
EcoRI	GAATTC	2 cut(s)	892, 1227
EcoRII	CCWGG	1 cut(s)	1877
EcoT14I	CCWWGG	5 cut(s)	157, 252, 360, 966, 1741
EcoT38I	GRGCYC	3 cut(s)	384, 1500, 1886
ErhI	CCWWGG	5 cut(s)	157, 252, 360, 966, 1741
Esp3I	CGTCTC	1 cut(s)	1666
FaqI	GGGAC	2 cut(s)	809, 1828
FauNDI	CATATG	1 cut(s)	1672
Fnu4HI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
FokI	GGATG	4 cut(s)	610, 1208, 1622, 1854
FriOI	GRGCYC	3 cut(s)	384, 1500, 1886
Fsp4HI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
FspBI	CTAG	4 cut(s)	435, 1145, 1404, 1556
GluI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
HaeIII	GGCC	8 cut(s)	359, 440, 646, 788, 965, 1498, 1564, 1847
HapII	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
HgaI	GACGC	2 cut(s)	284, 1091
HincII	GTYRAC	1 cut(s)	1428
HindII	GTYRAC	1 cut(s)	1428
HindIII	AAGCTT	2 cut(s)	386, 1187
HinfI	GANTC	8 cut(s)	284, 332, 418, 721, 846, 868, 1043, 1637
HpaII	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
HphI	GGTGA	2 cut(s)	413, 763
Hpy166II	GTNNAC	2 cut(s)	1428, 1625
Hpy188III	TCNNGA	9 cut(s)	75, 201, 716, 1156, 1181, 1232, 1373, 1757, 1787
Hpy8I	GTNNAC	2 cut(s)	1428, 1625
Hpy99I	CGWCG	1 cut(s)	45
HpyAV	CCTTC	6 cut(s)	392, 507, 850, 955, 985, 1093
HpyCH4III	ACNGT	2 cut(s)	882, 1335
HpyCH4IV	ACGT	1 cut(s)	1659
HpyF10VI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
HpyF3I	CTNAG	8 cut(s)	35, 725, 804, 1279, 1386, 1473, 1566, 1766
HpySE526I	ACGT	1 cut(s)	1659
Kzo9I	GATC	1 cut(s)	1021
LmnI	GCTCC	5 cut(s)	67, 952, 970, 1371, 1881
Lsp1109I	GCAGC	4 cut(s)	1481, 1553, 1561, 1726
LweI	GCATC	4 cut(s)	297, 1186, 1666, 1717
MaeI	CTAG	4 cut(s)	435, 1145, 1404, 1556
MaeII	ACGT	1 cut(s)	1659
MaeIII	GTNAC	2 cut(s)	984, 1416
MalI	GATC	1 cut(s)	1023
MboI	GATC	1 cut(s)	1021
MfeI	CAATTG	2 cut(s)	524, 1641
MhlI	GDGCHC	5 cut(s)	384, 1144, 1500, 1756, 1886
MlyI	GAGTC	2 cut(s)	341, 412
MmeI	TCCRAC	4 cut(s)	23, 648, 738, 927
MroXI	GAANNNNTTC	2 cut(s)	10, 1396
MseI	TTAA	7 cut(s)	444, 561, 744, 831, 1089, 1337, 1823
MslI	CAYNNNNRTG	1 cut(s)	1509
MspA1I	CMGCKG	2 cut(s)	1472, 1574
MspI	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
MspR9I	CCNGG	5 cut(s)	133, 794, 943, 1256, 1879
MunI	CAATTG	2 cut(s)	524, 1641
MvaI	CCWGG	1 cut(s)	1879
MwoI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
NciI	CCSGG	4 cut(s)	133, 794, 943, 1256
NcoI	CCATGG	2 cut(s)	157, 1741
NdeI	CATATG	1 cut(s)	1672
NdeII	GATC	1 cut(s)	1021
NlaIV	GGNNCC	2 cut(s)	408, 1498
NmeAIII	GCCGAG	1 cut(s)	1294
NmuCI	GTSAC	1 cut(s)	984
NspI	RCATGY	2 cut(s)	982, 1653
PaeI	GCATGC	1 cut(s)	1653
PagI	TCATGA	1 cut(s)	1756
PceI	AGGCCT	2 cut(s)	965, 1847
PciI	ACATGT	1 cut(s)	978
PdmI	GAANNNNTTC	2 cut(s)	10, 1396
PfeI	GAWTC	6 cut(s)	284, 721, 846, 868, 1043, 1637
PkrI	GCNGC	5 cut(s)	1252, 1471, 1543, 1576, 1716
PleI	GAGTC	2 cut(s)	340, 412
PpsI	GAGTC	2 cut(s)	340, 412
PpuMI	RGGWCCY	2 cut(s)	141, 406
PscI	ACATGT	1 cut(s)	978
PshBI	ATTAAT	1 cut(s)	1089
Psp124BI	GAGCTC	1 cut(s)	1886
Psp5II	RGGWCCY	2 cut(s)	141, 406
Psp6I	CCWGG	1 cut(s)	1877
PspGI	CCWGG	1 cut(s)	1877
PspN4I	GGNNCC	2 cut(s)	408, 1498
PspOMI	GGGCCC	1 cut(s)	1496
PspPI	GGNCC	8 cut(s)	141, 261, 406, 438, 1496, 1497, 1622, 1745
PspPPI	RGGWCCY	2 cut(s)	141, 406
PstNI	CAGNNNCTG	1 cut(s)	144
PvuII	CAGCTG	2 cut(s)	1472, 1574
RsaI	GTAC	1 cut(s)	1457
RsaNI	GTAC	1 cut(s)	1456
RseI	CAYNNNNRTG	1 cut(s)	1509
SacI	GAGCTC	1 cut(s)	1886
SaqAI	TTAA	7 cut(s)	444, 561, 744, 831, 1089, 1337, 1823
SatI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
Sau3AI	GATC	1 cut(s)	1021
Sau96I	GGNCC	8 cut(s)	141, 261, 406, 438, 1496, 1497, 1622, 1745
SchI	GAGTC	2 cut(s)	341, 412
ScrFI	CCNGG	5 cut(s)	133, 794, 943, 1256, 1879
SduI	GDGCHC	5 cut(s)	384, 1144, 1500, 1756, 1886
SfaNI	GCATC	4 cut(s)	297, 1186, 1666, 1717
SfcI	CTRYAG	1 cut(s)	850
SinI	GGWCC	5 cut(s)	141, 261, 406, 1622, 1745
SmiMI	CAYNNNNRTG	1 cut(s)	1509
SmlI	CTYRAG	5 cut(s)	235, 383, 716, 1358, 1371
SmoI	CTYRAG	5 cut(s)	235, 383, 716, 1358, 1371
SpeI	ACTAGT	1 cut(s)	1144
SphI	GCATGC	1 cut(s)	1653
SseBI	AGGCCT	2 cut(s)	965, 1847
SsiI	CCGC	3 cut(s)	818, 1034, 1251
SspMI	CTAG	4 cut(s)	435, 1145, 1404, 1556
SstI	GAGCTC	1 cut(s)	1886
StuI	AGGCCT	2 cut(s)	965, 1847
StyD4I	CCNGG	5 cut(s)	131, 792, 941, 1254, 1877
StyI	CCWWGG	5 cut(s)	157, 252, 360, 966, 1741
TaaI	ACNGT	2 cut(s)	882, 1335
TaiI	ACGT	1 cut(s)	1662
TaqI	TCGA	2 cut(s)	202, 1157
TaqII	GACCGA	1 cut(s)	1610
TauI	GCSGC	1 cut(s)	1253
TfiI	GAWTC	6 cut(s)	284, 721, 846, 868, 1043, 1637
Tru1I	TTAA	7 cut(s)	444, 561, 744, 831, 1089, 1337, 1823
Tru9I	TTAA	7 cut(s)	444, 561, 744, 831, 1089, 1337, 1823
TscAI	CASTG	3 cut(s)	903, 1071, 1338
TseFI	GTSAC	1 cut(s)	984
TseI	GCWGC	4 cut(s)	1469, 1541, 1574, 1714
Tsp45I	GTSAC	1 cut(s)	984
TspDTI	ATGAA	5 cut(s)	99, 644, 860, 1322, 1697
TspGWI	ACGGA	2 cut(s)	1133, 1443
TspRI	CASTG	3 cut(s)	903, 1071, 1338
VpaK11BI	GGWCC	5 cut(s)	141, 261, 406, 1622, 1745
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	2 cut(s)	892, 1227
XceI	RCATGY	2 cut(s)	982, 1653
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmnI	GAANNNNTTC	2 cut(s)	10, 1396
XspI	CTAG	4 cut(s)	435, 1145, 1404, 1556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.