Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000452.1

Orthogroup ID

OG0001147

Physical Location & Seq

Genomic Coordinates Reverse (-)

68590 .. 73194

Gene Structure 4605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000452.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

atgttcagtctggtggcgcgtccatgtggcgctgtcgtcgaacgggcctgtgaggttacggagtgcactggcagggttctgaggcttaggcgcggctcgggaaaggtggatgcaaggtgtattttgggttgggcagatctacttctatatgaccttctttggtcatgggtgagcacaaggatagagcggcgaggatgggttgttggcccgcggcgagagctggggtcacggtctcctttattgatcgggtttctgcctgagttgattgggttgggtggatcagggcttcgatctcctggcagaggcgatctcgaaagagatctgtcgtggcttgaggtccgaccttcgatggcagtggagatcgttggtgggcagagtgggaataccagattgatgacactggttcgttggcggcggaattggtggtgggattggacgcctgcaactcgttggcggccaagttggtgctgggattggaggattgcagctctggaattcgttagggaggttgggccgggctttgggctttgggtccttgctggtgggctgttgggttttttcccctggtgtgctttgtctgctatatgtacgttgcgcgttccttgcattagcaaatggtcccaatcttctagtggcagtaatgggtctgctctaggtaggaggcgagttcattgcttggtcaaattgtcgcttcctcctagtggcagagtgaaactaagtgtcactggatgtattttccagtggcaacatgatgggaaagctgtctctaatcattcaatcagctgcgaaattcgaataactgatttgatgagtatggcgaggccggtgcctgagaatccttctgagcagggaattgcaaaagcttcgacaagcatgtgtattccactggaggctcagtgtcctgtcagaaagtggtattttacgaaacaggaaattgaagactctccatcccggagggatggcattagcacgaagaaagagtcgcacttgcggagtttatactgctcgtttcttcaggagattgggatgaagcttaaagtgcctcagctgacaatatcatctgcaatgatgttgtgccaccagttttatatgcgtcaatctcacgctaagaatggttggcagacggtggcaactgcgagcatctttctcgcatgcaaagcagaagatacaccacgctatctgaatgatgttgttgtggtggcatatgagatggtgcacaaatttgattcatctgccttgcaccgaatcagacaaaaagaatttctcaataagcaaaaggaattgatcctagttgcggagagacttctgctgtcaacaattggctttgatctagacattcagcttccatacaagatacttgttgctgctctaaagagattggatcttctccctgaccttgctaaggcggcatggagttttgtgaacgattggcttcgcacatcattgtgcttgcagtacaagccccattacattgcagctggttcggttgctcttgctgctaattttcaaaaggtgaaactacctaaagagaagggaaaagtttggtggctggagtttgatgttacgccgaaacagttggatgaggtcattcagcggatgcatagtatgttcaagcctctaccagctaaaactgggaaggccgttcaacctgaaattttatccggaaagccaattgatagtagccctcaatcatgtatttcaagtgaagcaatggtagaccagcattctaggcatggtgccactgtggatgatagaggattaggaggagagtctgttatgtctacatgtaggcaaaatcttggaggtgagaacaatcttactgggaaggatgccttaccatgccagacgaataataggagtattgtcaaggatagtggtggtgagattaagccaataagaggggaattggacgatcagagcacaagatgcaagattcttgatgttcctaaaagctgtggtaagatcgatattaaccgtattcgagaattgaagaggagaagatgtgataaaggtgtaaataagaagttggcgggctccattactgatgagttagatcctgaagcctggatagaaagtgagcttgaaaacggagtagagctggaagatgcatctgcagcaaagaaacaaaggaaggcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_N

Protein Analysis

712

Amino Acids

79.83

Weight (kDa)

9.29

Isoelectric Point (pI)

56.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630 AT1G27630
fragaria_vesca	FvH4_2g39390 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420 FvH4_6g48420
malus_domestica	MD04G1049900.v1.1 MD06G1050000.v1.1 MD08G1026200.v1.1
prunus_persica	Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1 Prupe.1G374900_v2.0.a1
pyrus_communis	pycom04g04390 pycom06g04230 pycom06g04240 pycom08g02030
rosa_chinensis	RchiOBHm_Chr2g0168341 RchiOBHm_Chr3g0451061 RchiOBHm_Chr6g0301611
rosa_laevigata	RLG00000011239 RLG00000021768 RLG00000025695
rosa_multiflora	Rmu_co8487951.1_g000001 Rmu_sc0000078.1_g000004 Rmu_sc0016462.1_g000004 Rmu_ssc0000452.1_g000012
rosa_roxburghii	Rroxscaffold_2G00083130 Rroxscaffold_7G00166600
rosa_rugosa	Rorug02G0532800 Rorug02G0532900 Rorug02G0533000 Rorug02G0533000 Rorug02G0630800 Rorug06G0307200 Rorug06G0307300
rosa_samantha	Rh2AG602100 Rh2BG615400 Rh2CG583100 Rh2DG625600 Rh3AG033200 Rh3BG033500 Rh3CG032200 Rh3DG033200 Rh6AG420100 Rh6BG426200 Rh6CG433100 Rh6DG419500
rosa_wichuraiana	Rw0G019830 Rw2G049980 Rw3G002440 Rw6G036320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	826, 1736
AccBSI	CCGCTC	1 cut(s)	187
AccI	GTMKAC	2 cut(s)	1716, 1781
AccII	CGCG	4 cut(s)	19, 93, 211, 597
AccIII	TCCGGA	1 cut(s)	1661
AclWI	GGATC	4 cut(s)	286, 1279, 1389, 2048
AcoI	YGGCCR	1 cut(s)	455
AcsI	RAATTY	5 cut(s)	494, 789, 1220, 1259, 1653
AcuI	CTGAAG	2 cut(s)	998, 2079
AcyI	GRCGYC	1 cut(s)	437
AfaI	GTAC	2 cut(s)	589, 1457
AfiI	CCNNNNNNNGG	6 cut(s)	302, 521, 701, 1294, 1402, 1898
AflIII	ACRYGT	1 cut(s)	1784
AgsI	TTSAA	8 cut(s)	777, 938, 1508, 1612, 1646, 1701, 1990, 2084
AjnI	CCWGG	3 cut(s)	295, 563, 2063
Alw21I	GWGCWC	4 cut(s)	68, 176, 1218, 1922
Alw26I	GTCTC	3 cut(s)	237, 769, 1294
Alw44I	GTGCAC	2 cut(s)	64, 1214
AlwI	GGATC	4 cut(s)	286, 1279, 1389, 2048
Ama87I	CYCGRG	1 cut(s)	97
Aor13HI	TCCGGA	1 cut(s)	1661
AoxI	GGCC	6 cut(s)	45, 205, 455, 512, 821, 1638
ApaLI	GTGCAC	2 cut(s)	64, 1214
ApeKI	GCWGC	6 cut(s)	485, 783, 1364, 1475, 1496, 2114
ApoI	RAATTY	5 cut(s)	494, 789, 1220, 1259, 1653
ArsI	GACNNNNNNTTYG	2 cut(s)	965, 997
AspLEI	GCGC	4 cut(s)	19, 32, 93, 597
AspS9I	GGNCC	6 cut(s)	45, 206, 337, 512, 532, 618
AsuC2I	CCSGG	2 cut(s)	516, 952
AsuHPI	GGTGA	4 cut(s)	181, 1525, 1817, 1892
AsuII	TTCGAA	1 cut(s)	793
AvaI	CYCGRG	1 cut(s)	97
AvaII	GGWCC	3 cut(s)	337, 532, 618
BaeGI	GKGCMC	2 cut(s)	68, 1218
BanI	GGYRCC	2 cut(s)	826, 1736
BanII	GRGCYC	1 cut(s)	2036
BbsI	GAAGAC	1 cut(s)	945
Bbv12I	GWGCWC	4 cut(s)	68, 176, 1218, 1922
BbvCI	CCTCAGC	1 cut(s)	1044
BbvI	GCAGC	6 cut(s)	497, 770, 1351, 1483, 1487, 2126
BccI	CCATC	6 cut(s)	189, 343, 746, 953, 955, 1204
BceAI	ACGGC	1 cut(s)	1625
BciT130I	CCWGG	3 cut(s)	297, 565, 2065
BcnI	CCSGG	2 cut(s)	516, 952
BcoDI	GTCTC	3 cut(s)	237, 769, 1294
BfaI	CTAG	6 cut(s)	630, 653, 699, 1289, 1331, 1728
BfmI	CTRYAG	1 cut(s)	2112
BfoI	RGCGCY	1 cut(s)	33
BglII	AGATCT	2 cut(s)	136, 319
Bme1390I	CCNGG	5 cut(s)	297, 516, 565, 952, 2065
Bme18I	GGWCC	3 cut(s)	337, 532, 618
BmeT110I	CYCGRG	1 cut(s)	97
BmgT120I	GGNCC	6 cut(s)	45, 206, 337, 512, 532, 618
BmiI	GGNNCC	5 cut(s)	533, 620, 828, 1738, 2035
BmrFI	CCNGG	5 cut(s)	297, 516, 565, 952, 2065
BmrI	ACTGGG	2 cut(s)	1641, 1830
BmsI	GCATC	7 cut(s)	100, 1149, 1587, 1819, 1916, 2095, 2117
BmuI	ACTGGG	2 cut(s)	1641, 1830
BpiI	GAAGAC	1 cut(s)	945
BplI	GAGNNNNNCTC	2 cut(s)	294, 326
BpmI	CTGGAG	2 cut(s)	908, 1571
Bpu10I	CCTNAGC	3 cut(s)	86, 1044, 1401
Bpu14I	TTCGAA	1 cut(s)	793
BpuEI	CTTGAG	1 cut(s)	353
BpuMI	CCSGG	2 cut(s)	516, 952
Bsa29I	ATCGAT	1 cut(s)	1965
BsaHI	GRCGYC	1 cut(s)	437
BsaI	GGTCTC	1 cut(s)	237
BsaJI	CCNNGG	2 cut(s)	209, 563
BsaWI	WCCGGW	1 cut(s)	1661
BsaXI	ACNNNNNCTCC	6 cut(s)	881, 911, 1758, 1788, 1987, 2017
Bsc4I	CCNNNNNNNGG	6 cut(s)	302, 521, 701, 1294, 1402, 1898
Bse118I	RCCGGY	1 cut(s)	823
Bse1I	ACTGG	8 cut(s)	73, 405, 730, 739, 891, 1081, 1636, 1825
Bse3DI	GCAATG	4 cut(s)	670, 1071, 1470, 1716
BseAI	TCCGGA	1 cut(s)	1661
BseBI	CCWGG	3 cut(s)	297, 565, 2065
BseCI	ATCGAT	1 cut(s)	1965
BseDI	CCNNGG	2 cut(s)	209, 563
BseLI	CCNNNNNNNGG	6 cut(s)	302, 521, 701, 1294, 1402, 1898
BseMI	GCAATG	4 cut(s)	670, 1071, 1470, 1716
BseMII	CTCAG	6 cut(s)	71, 249, 822, 834, 908, 1058
BseNI	ACTGG	8 cut(s)	73, 405, 730, 739, 891, 1081, 1636, 1825
BseRI	GAGGAG	2 cut(s)	1779, 2008
BseSI	GKGCMC	2 cut(s)	68, 1218
BseXI	GCAGC	6 cut(s)	497, 770, 1351, 1483, 1487, 2126
BseYI	CCCAGC	2 cut(s)	220, 468
Bsh1236I	CGCG	4 cut(s)	19, 93, 211, 597
BshFI	GGCC	6 cut(s)	47, 207, 457, 514, 823, 1640
BshNI	GGYRCC	2 cut(s)	826, 1736
BshVI	ATCGAT	1 cut(s)	1965
BsiHKAI	GWGCWC	4 cut(s)	68, 176, 1218, 1922
BsiHKCI	CYCGRG	1 cut(s)	97
BsiSI	CCGG	4 cut(s)	515, 824, 952, 1662
BslFI	GGGAC	1 cut(s)	604
BslI	CCNNNNNNNGG	6 cut(s)	302, 521, 701, 1294, 1402, 1898
BsmAI	GTCTC	3 cut(s)	237, 769, 1294
BsmFI	GGGAC	1 cut(s)	604
BsmI	GAATGC	1 cut(s)	1723
BsnI	GGCC	6 cut(s)	47, 207, 457, 514, 823, 1640
Bso31I	GGTCTC	1 cut(s)	237
BsoBI	CYCGRG	1 cut(s)	97
Bsp119I	TTCGAA	1 cut(s)	793
Bsp1286I	GDGCHC	5 cut(s)	68, 176, 1218, 1922, 2036
Bsp13I	TCCGGA	1 cut(s)	1661
BspANI	GGCC	6 cut(s)	47, 207, 457, 514, 823, 1640
BspCNI	CTCAG	6 cut(s)	72, 250, 823, 835, 907, 1057
BspDI	ATCGAT	1 cut(s)	1965
BspEI	TCCGGA	1 cut(s)	1661
BspFNI	CGCG	4 cut(s)	19, 93, 211, 597
BspLI	GGNNCC	5 cut(s)	533, 620, 828, 1738, 2035
BspMAI	CTGCAG	1 cut(s)	2116
BspPI	GGATC	4 cut(s)	286, 1279, 1389, 2048
BspT104I	TTCGAA	1 cut(s)	793
BspT107I	GGYRCC	2 cut(s)	826, 1736
BspTNI	GGTCTC	1 cut(s)	237
BsrBI	CCGCTC	1 cut(s)	187
BsrDI	GCAATG	4 cut(s)	670, 1071, 1470, 1716
BsrFI	RCCGGY	1 cut(s)	823
BsrI	ACTGG	8 cut(s)	73, 405, 730, 739, 891, 1081, 1636, 1825
BssAI	RCCGGY	1 cut(s)	823
BssECI	CCNNGG	2 cut(s)	209, 563
BssNI	GRCGYC	1 cut(s)	437
Bst2UI	CCWGG	3 cut(s)	297, 565, 2065
Bst4CI	ACNGT	5 cut(s)	231, 1126, 1575, 1744, 1976
Bst6I	CTCTTC	1 cut(s)	1985
BstACI	GRCGYC	1 cut(s)	437
BstAPI	GCANNNNNTGC	1 cut(s)	1926
BstBI	TTCGAA	1 cut(s)	793
BstC8I	GCNNGC	6 cut(s)	209, 441, 1138, 1153, 1451, 2032
BstDSI	CCRYGG	1 cut(s)	209
BstENI	CCTNNNNNAGG	2 cut(s)	300, 1400
BstFNI	CGCG	4 cut(s)	19, 93, 211, 597
BstH2I	RGCGCY	1 cut(s)	33
BstHHI	GCGC	4 cut(s)	19, 32, 93, 597
BstMAI	GTCTC	3 cut(s)	237, 769, 1294
BstNI	CCWGG	3 cut(s)	297, 565, 2065
BstNSI	RCATGY	3 cut(s)	877, 1155, 1788
BstSCI	CCNGG	5 cut(s)	295, 514, 563, 950, 2063
BstSFI	CTRYAG	1 cut(s)	2112
BstSLI	GKGCMC	2 cut(s)	68, 1218
BstUI	CGCG	4 cut(s)	19, 93, 211, 597
BstV1I	GCAGC	6 cut(s)	497, 770, 1351, 1483, 1487, 2126
BstV2I	GAAGAC	1 cut(s)	945
BstX2I	RGATCY	4 cut(s)	136, 319, 1381, 2053
BstYI	RGATCY	4 cut(s)	136, 319, 1381, 2053
Bsu15I	ATCGAT	1 cut(s)	1965
BsuRI	GGCC	6 cut(s)	47, 207, 457, 514, 823, 1640
BsuTUI	ATCGAT	1 cut(s)	1965
BtgI	CCRYGG	1 cut(s)	209
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	8 cut(s)	66, 360, 398, 723, 746, 884, 902, 1740
Cac8I	GCNNGC	6 cut(s)	209, 441, 1138, 1153, 1451, 2032
CfoI	GCGC	4 cut(s)	19, 32, 93, 597
Cfr10I	RCCGGY	1 cut(s)	823
Cfr13I	GGNCC	6 cut(s)	45, 206, 337, 512, 532, 618
Cfr42I	CCGCGG	1 cut(s)	212
ClaI	ATCGAT	1 cut(s)	1965
CseI	GACGC	3 cut(s)	8, 445, 1082
Csp6I	GTAC	2 cut(s)	588, 1456
CspCI	CAANNNNNGTGG	2 cut(s)	1855, 1890
CviQI	GTAC	2 cut(s)	588, 1456
EaeI	YGGCCR	1 cut(s)	455
Eam1104I	CTCTTC	1 cut(s)	1985
EarI	CTCTTC	1 cut(s)	1985
EciI	GGCGGA	1 cut(s)	430
Eco24I	GRGCYC	1 cut(s)	2036
Eco31I	GGTCTC	1 cut(s)	237
Eco47I	GGWCC	3 cut(s)	337, 532, 618
Eco57I	CTGAAG	2 cut(s)	998, 2079
Eco88I	CYCGRG	1 cut(s)	97
EcoNI	CCTNNNNNAGG	2 cut(s)	300, 1400
EcoO109I	RGGNCCY	1 cut(s)	532
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	3 cut(s)	295, 563, 2063
EcoT22I	ATGCAT	2 cut(s)	1602, 2110
EcoT38I	GRGCYC	1 cut(s)	2036
FalI	AAGNNNNNCTT	3 cut(s)	1817, 1849, 2119
FaqI	GGGAC	1 cut(s)	604
FauI	CCCGC	2 cut(s)	216, 2023
FauNDI	CATATG	1 cut(s)	1204
FblI	GTMKAC	2 cut(s)	1716, 1781
FriOI	GRGCYC	1 cut(s)	2036
FspBI	CTAG	6 cut(s)	630, 653, 699, 1289, 1331, 1728
GlaI	GCGC	4 cut(s)	18, 31, 92, 596
GsaI	CCCAGC	2 cut(s)	224, 472
GsuI	CTGGAG	2 cut(s)	908, 1571
HaeII	RGCGCY	1 cut(s)	33
HaeIII	GGCC	6 cut(s)	47, 207, 457, 514, 823, 1640
HapII	CCGG	4 cut(s)	515, 824, 952, 1662
HgaI	GACGC	3 cut(s)	8, 445, 1082
HhaI	GCGC	4 cut(s)	19, 32, 93, 597
Hin1I	GRCGYC	1 cut(s)	437
Hin6I	GCGC	4 cut(s)	17, 30, 91, 595
HinP1I	GCGC	4 cut(s)	17, 30, 91, 595
HincII	GTYRAC	1 cut(s)	1314
HindII	GTYRAC	1 cut(s)	1314
HindIII	AAGCTT	2 cut(s)	861, 1031
HinfI	GANTC	7 cut(s)	835, 941, 980, 1226, 1245, 1769, 1933
HpaII	CCGG	4 cut(s)	515, 824, 952, 1662
HphI	GGTGA	4 cut(s)	181, 1525, 1817, 1892
Hpy166II	GTNNAC	6 cut(s)	66, 1216, 1314, 1423, 1717, 1782
Hpy188I	TCNGA	7 cut(s)	81, 341, 844, 908, 1182, 1250, 1917
Hpy188III	TCNNGA	9 cut(s)	99, 311, 491, 1016, 1331, 1662, 1937, 1982, 2057
Hpy8I	GTNNAC	6 cut(s)	66, 1216, 1314, 1423, 1717, 1782
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	7 cut(s)	164, 354, 849, 1525, 1630, 1819, 2125
HpyCH4III	ACNGT	5 cut(s)	231, 1126, 1575, 1744, 1976
HpyCH4IV	ACGT	1 cut(s)	590
HpySE526I	ACGT	1 cut(s)	590
Hsp92I	GRCGYC	1 cut(s)	437
HspAI	GCGC	4 cut(s)	17, 30, 91, 595
Kpn2I	TCCGGA	1 cut(s)	1661
KspI	CCGCGG	1 cut(s)	212
LmnI	GCTCC	1 cut(s)	2039
Lsp1109I	GCAGC	6 cut(s)	497, 770, 1351, 1483, 1487, 2126
LweI	GCATC	7 cut(s)	100, 1149, 1587, 1819, 1916, 2095, 2117
MaeI	CTAG	6 cut(s)	630, 653, 699, 1289, 1331, 1728
MaeII	ACGT	1 cut(s)	590
MaeIII	GTNAC	4 cut(s)	55, 225, 721, 1561
MbiI	CCGCTC	1 cut(s)	187
MboII	GAAGA	9 cut(s)	618, 950, 985, 1004, 1175, 1376, 2002, 2010, 2114
MfeI	CAATTG	2 cut(s)	1317, 1671
MflI	RGATCY	4 cut(s)	136, 319, 1381, 2053
MhlI	GDGCHC	5 cut(s)	68, 176, 1218, 1922, 2036
MlyI	GAGTC	3 cut(s)	935, 989, 1778
MmeI	TCCRAC	2 cut(s)	364, 1557
Mph1103I	ATGCAT	2 cut(s)	1602, 2110
MroI	TCCGGA	1 cut(s)	1661
MseI	TTAA	3 cut(s)	1035, 1887, 1971
MslI	CAYNNNNRTG	1 cut(s)	1444
MspA1I	CMGCKG	5 cut(s)	211, 783, 1048, 1478, 1594
MspI	CCGG	4 cut(s)	515, 824, 952, 1662
MspR9I	CCNGG	5 cut(s)	297, 516, 565, 952, 2065
MunI	CAATTG	2 cut(s)	1317, 1671
Mva1269I	GAATGC	1 cut(s)	1723
MvaI	CCWGG	3 cut(s)	297, 565, 2065
MvnI	CGCG	4 cut(s)	19, 93, 211, 597
NciI	CCSGG	2 cut(s)	516, 952
NdeI	CATATG	1 cut(s)	1204
NlaIV	GGNNCC	5 cut(s)	533, 620, 828, 1738, 2035
NmuCI	GTSAC	2 cut(s)	225, 721
NsiI	ATGCAT	2 cut(s)	1602, 2110
NspI	RCATGY	3 cut(s)	877, 1155, 1788
NspV	TTCGAA	1 cut(s)	793
PaeI	GCATGC	1 cut(s)	1155
PciI	ACATGT	1 cut(s)	1784
PctI	GAATGC	1 cut(s)	1723
PfeI	GAWTC	4 cut(s)	835, 1226, 1245, 1933
PfoI	TCCNGGA	1 cut(s)	950
PleI	GAGTC	3 cut(s)	935, 988, 1777
PpsI	GAGTC	3 cut(s)	935, 988, 1777
PpuMI	RGGWCCY	1 cut(s)	532
PscI	ACATGT	1 cut(s)	1784
Psp5II	RGGWCCY	1 cut(s)	532
Psp6I	CCWGG	3 cut(s)	295, 563, 2063
PspFI	CCCAGC	2 cut(s)	220, 468
PspGI	CCWGG	3 cut(s)	295, 563, 2063
PspN4I	GGNNCC	5 cut(s)	533, 620, 828, 1738, 2035
PspPI	GGNCC	6 cut(s)	45, 206, 337, 512, 532, 618
PspPPI	RGGWCCY	1 cut(s)	532
PstI	CTGCAG	1 cut(s)	2116
PsuI	RGATCY	4 cut(s)	136, 319, 1381, 2053
PvuII	CAGCTG	3 cut(s)	783, 1048, 1478
RsaI	GTAC	2 cut(s)	589, 1457
RsaNI	GTAC	2 cut(s)	588, 1456
RseI	CAYNNNNRTG	1 cut(s)	1444
SacII	CCGCGG	1 cut(s)	212
SaqAI	TTAA	3 cut(s)	1035, 1887, 1971
Sau96I	GGNCC	6 cut(s)	45, 206, 337, 512, 532, 618
SchI	GAGTC	3 cut(s)	935, 989, 1778
ScrFI	CCNGG	5 cut(s)	297, 516, 565, 952, 2065
SduI	GDGCHC	5 cut(s)	68, 176, 1218, 1922, 2036
SfaNI	GCATC	7 cut(s)	100, 1149, 1587, 1819, 1916, 2095, 2117
SfcI	CTRYAG	1 cut(s)	2112
Sfr303I	CCGCGG	1 cut(s)	212
SfuI	TTCGAA	1 cut(s)	793
SgrBI	CCGCGG	1 cut(s)	212
SinI	GGWCC	3 cut(s)	337, 532, 618
SmiMI	CAYNNNNRTG	1 cut(s)	1444
SmlI	CTYRAG	1 cut(s)	332
SmoI	CTYRAG	1 cut(s)	332
SphI	GCATGC	1 cut(s)	1155
SspMI	CTAG	6 cut(s)	630, 653, 699, 1289, 1331, 1728
StyD4I	CCNGG	5 cut(s)	295, 514, 563, 950, 2063
TaaI	ACNGT	5 cut(s)	231, 1126, 1575, 1744, 1976
TaiI	ACGT	1 cut(s)	593
TaqI	TCGA	8 cut(s)	39, 289, 312, 347, 793, 866, 1965, 1981
TatI	WGTACW	1 cut(s)	1455
TauI	GCSGC	6 cut(s)	96, 190, 214, 415, 457, 1409
TfiI	GAWTC	4 cut(s)	835, 1226, 1245, 1933
Tru1I	TTAA	3 cut(s)	1035, 1887, 1971
Tru9I	TTAA	3 cut(s)	1035, 1887, 1971
TscAI	CASTG	8 cut(s)	73, 360, 405, 730, 746, 891, 902, 1747
TseFI	GTSAC	2 cut(s)	225, 721
TseI	GCWGC	6 cut(s)	485, 783, 1364, 1475, 1496, 2114
Tsp45I	GTSAC	2 cut(s)	225, 721
TspDTI	ATGAA	3 cut(s)	659, 1043, 1218
TspGWI	ACGGA	2 cut(s)	74, 2103
TspRI	CASTG	8 cut(s)	73, 360, 405, 730, 746, 891, 902, 1747
VneI	GTGCAC	2 cut(s)	64, 1214
VpaK11BI	GGWCC	3 cut(s)	337, 532, 618
XagI	CCTNNNNNAGG	2 cut(s)	300, 1400
XapI	RAATTY	5 cut(s)	494, 789, 1220, 1259, 1653
XbaI	TCTAGA	1 cut(s)	1330
XceI	RCATGY	3 cut(s)	877, 1155, 1788
XcmI	CCANNNNNNNNNTGG	2 cut(s)	465, 629
XmiI	GTMKAC	2 cut(s)	1716, 1781
XspI	CTAG	6 cut(s)	630, 653, 699, 1289, 1331, 1728
Zsp2I	ATGCAT	2 cut(s)	1602, 2110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.