RLG00000011442

phosphatase 2c

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000743
Physical Location & Seq
Reverse (-)
9471792 .. 9479985
8194 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011442

Sequence Viewer

Length: 2604 bp
ATGGCTCTTCTGAGCTTCAACTCCATTTGTTGCCTGTCGACTTCGCCGGATCTTCAAAAATGGAATAATATTATACAGACTCAAGTGCTCGAGGGGAACGCCGGGCAGGCAATTCGGTCGTATGTAAAAATGCAAAGACTTGGTCTCTTTGCTGATAACTATACATTTCCGGTTCTGCTGAAAGCAGCAGGTAATGCTTCCTATTTGGGTATAGGGTTAGCACTTCACGGACAGACACTGAAAACTGGGTTTTGTGACCATCTTTTCGTCCAAACTGCTCTGCTGAAAATGTATTCTTCTCTTGGAATCGTAGCGGATGCCCGCAAAGCGTTTGATAAAATGCCCGTGAAAGATGTGGTAGCCTGGAACTCCATGTTATATGTGTATGCTTCTAGTGGGCAGATGGGGAATGCAGTGCAAGTCTTTGATACAATGCCATCACAGGACCTTTTGTCTTTCAATATTATGATCTCTGGGTTCGCAGGGACCGGAAGCAACATATCTGCCAGAAGCATTTTTGATAGAATTCCTGACAAGGACACTGTGTCTTGGAACTCAATGATATTGGCGTGCATGAACGCTGGAGATGTGGCTGAAGCGCATGAGTTGTTCGAGTCGATGCCTGAGAAAAATGTCATAACTTGGAACACAATGATAATGGGTTATCTGAACAATCAGGTTTACTCCAAGGCAATCGAATTCTTGGACAAAATGAAGATGGGAAATATTGAACCGGATCATCTGAGTATGACTGGTGCTTTATCTGCCTGTGCTCATTTGGGGTCGCTTGAAACTGGCATAAAAATACATACATATGCCAAACTCTCCGGGCAGGCTTCAAGTCCCCATGTAGCAACAGCACTTATAGATATGTATGCCAAGTGCGGAAGCATACACAACTCTTTAGAGGTGTTCTACAAGTTCAAACAAAAAGATGTCTACTGTTGGAACGCCATAATTTCAGGACTTGCTCTTCACGGTTTTGGCTACGCAGCCCTGAAAATCTTCAACCAAATGAGAGCCGATTGTCGAGTAAAACCAGATGATATCACCTTCATTGGGGTTTTAAGTGCTTGCAGCCATGGAGGGTTGGTAGAACAAGGATGTGAATTGTTTGATTCAATGGAAAAGCAATTCGGGATTACTCCAAAGGCAGAGCATTATGGGTGCATGGTCGACCTTCTGGGCAGAGCGGGTCTTTTCGACAGTGCTCTGACACTCATAGAGACAATGCCTTTTGACGCAAGCGAGTCCATCTTGGGTGCTTTGCTGAGTGCTTGTGTGATTCATCAGGACCTTGAAAATGGGGAGAAAGCAATGAAGCTAATTGTTTCGACCAAGGCTGCTCGGAGCGATGGGGAGTACATGATGTTTGCAAACTTGTACGCGTCATGCGGTGAATGGGAAGAAGCACAGAGATGGAGAGATATGATGAATGAGTCCGGGATTGAAAAGACTGCAGCTCTTCTCTGCGGCCTCGCCTCGACTCTCATATCATATTGGAATATGGGTATATATCTCAGCACGCCCAAAACTGACAAGTTCTCTGAAGATGGAGAGAATGGCTGGGTCAGATATGGGTTATCGTCCATGCAAGGATGGCGTGCAACTATGGAGGATGCTCATGCAGCATATCCCGATCTAGATGCATCCACCTCATTCTTTGGTGTTTATGATGGCCATGGAGGAAAGGTAGTTGCTAAATTCTGTGCCAAATATCTTCACCGACAAATGCTCAAGAATGAAGCATATTCAGCTGGAGACATAGGAACTTCTGTTCAAAAAGCTTTTTTCAGAATGGATGAAATGATGCGTGGACAAAGGGGTTGGAGAGAGTTAGCTGTTCTGGGAGATAAGATAAACAAGTTTACTGGCATGATAGAAGGGTTAATCTGGTCCCCGAGGAGCAGTGAGGGTAATGATCAAGCTGATGATTGGGCTTTTGAGGAGGGGCCTCACTCTGATTTCAGTGGTCCAACTTCTGGGAGCACAGCTTGTGTTGCAATTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCTCGTTGTGTGATATCTAGGAAGGGTCAGGCATATAACCTGTCCAGAGATCACAAACCTGAACTTGAGCTTGAGAAGGAAAGGATTTTAAAAGCTGGTGGTTTTATCCATGCAGGACGAGTCAATGGCAGTTTGAATCTTGCAAGAGCTATAGGTGACATGGAATTCAAGCAGAATAAATTCTTGCCAGTGGAAAAGCAAATTGTCACTGCCAGTCCTGATATAAATACTGTTGAACTTTGTGATGATGACGAGTTTATGGTCTTAGCATGTGATGGTATCTGGGATTGCATGTCAAGCCAGCAACTGGTAGATTTTGTGCATGAACAGCTAAGCTCGGAAAGCAAACTGTCTGTGGTGGTTGAAAGAGTCCTTGACAAATGTTTGGCACCATCGACTGCTGGTGGGGAGGGATGCGATAACATGACCATGATCTTGGTGCAATTCAAGAAGCCCATTGTGCCAGTTGAATCTGCGGGTAAGCAGCAGGAATCCTCAACAACCGAAGAAGAAGGACCTGGAACGGATGCAAATCCAAGTGAAAGTGAATCAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0033993 GO:0042221 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP2C

Protein Analysis

868

Amino Acids

94.98

Weight (kDa)

5.15

Isoelectric Point (pI)

41.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 117 - 161 2e-06 PPR repeat family
PPR_2 PF13041 179 - 212 6.8e-07 PPR repeat family
PPR PF01535 182 - 212 2.1e-06 PPR repeat
PPR_2 PF13041 210 - 259 3.2e-10 PPR repeat family
PPR_2 PF13041 311 - 360 6.8e-06 PPR repeat family
E_motif PF20431 430 - 486 3e-08 E motif
PP2C PF00481 525 - 606 3.4e-10 Protein phosphatase 2C
PP2C PF00481 655 - 815 1.3e-59 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 179
AccB1I GGYRCC 1 cut(s) 2434
AccB7I CCANNNNNTGG 2 cut(s) 1982, 2353
AccBSI CCGCTC 1 cut(s) 1193
AccI GTMKAC 3 cut(s) 38, 939, 1176
AccII CGCG 1 cut(s) 1388
AciI CCGC 7 cut(s) 314, 322, 885, 1193, 1395, 1473, 2522
AclWI GGATC 2 cut(s) 57, 744
AcoI YGGCCR 1 cut(s) 1678
AcsI RAATTY 5 cut(s) 525, 698, 1703, 2210, 2225
AcuI CTGAAG 2 cut(s) 615, 1569
AfaI GTAC 2 cut(s) 1364, 1385
AfiI CCNNNNNNNGG 3 cut(s) 1059, 1982, 2353
AflIII ACRYGT 1 cut(s) 1386
AhdI GACNNNNNGTC 2 cut(s) 451, 544
AjnI CCWGG 2 cut(s) 362, 2563
AloI GAACNNNNNNTCC 2 cut(s) 1761, 1793
Alw21I GWGCWC 4 cut(s) 90, 775, 1213, 1991
Alw26I GTCTC 3 cut(s) 149, 1220, 1755
AlwI GGATC 2 cut(s) 57, 744
AlwNI CAGNNNCTG 2 cut(s) 238, 2353
Ama87I CYCGRG 2 cut(s) 89, 1900
AoxI GGCC 3 cut(s) 1474, 1678, 1952
ApeKI GCWGC 7 cut(s) 185, 992, 1077, 1343, 1460, 1628, 2530
ApoI RAATTY 5 cut(s) 525, 698, 1703, 2210, 2225
ArsI GACNNNNNNTTYG 4 cut(s) 127, 159, 248, 280
Asp700I GAANNNNTTC 2 cut(s) 1004, 2225
AspLEI GCGC 1 cut(s) 601
AspS9I GGNCC 7 cut(s) 445, 486, 1294, 1896, 1952, 1973, 2561
AsuC2I CCSGG 3 cut(s) 103, 829, 1444
AsuHPI GGTGA 5 cut(s) 1042, 1409, 1715, 2054, 2213
AvaI CYCGRG 2 cut(s) 89, 1900
AvaII GGWCC 6 cut(s) 445, 486, 1294, 1896, 1973, 2561
BalI TGGCCA 1 cut(s) 1680
BanI GGYRCC 1 cut(s) 2434
Bbv12I GWGCWC 4 cut(s) 90, 775, 1213, 1991
BbvI GCAGC 7 cut(s) 197, 1004, 1089, 1330, 1472, 1640, 2542
BcgI CGANNNNNNTGC 6 cut(s) 95, 99, 129, 133, 1628, 1662
BciT130I CCWGG 2 cut(s) 364, 2565
BclI TGATCA 1 cut(s) 1921
BcnI CCSGG 3 cut(s) 103, 829, 1444
BcoDI GTCTC 3 cut(s) 149, 1220, 1755
BfaI CTAG 3 cut(s) 393, 1643, 2064
BfmI CTRYAG 2 cut(s) 1458, 2196
BfuAI ACCTGC 1 cut(s) 179
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 8 cut(s) 186, 993, 1078, 1344, 1461, 1474, 1629, 2531
BlpI GCTNAGC 1 cut(s) 2378
BlsI GCNGC 8 cut(s) 187, 994, 1079, 1345, 1462, 1475, 1630, 2532
Bme1390I CCNGG 5 cut(s) 103, 364, 829, 1444, 2565
Bme18I GGWCC 6 cut(s) 445, 486, 1294, 1896, 1973, 2561
BmeRI GACNNNNNGTC 2 cut(s) 451, 544
BmeT110I CYCGRG 2 cut(s) 89, 1900
BmgT120I GGNCC 7 cut(s) 445, 486, 1294, 1896, 1952, 1973, 2561
BmiI GGNNCC 4 cut(s) 487, 1898, 1953, 2436
BmrFI CCNGG 5 cut(s) 103, 364, 829, 1444, 2565
BmrI ACTGGG 1 cut(s) 255
BmsI GCATC 8 cut(s) 307, 609, 1609, 1636, 1658, 1800, 2450, 2563
BmuI ACTGGG 1 cut(s) 255
BpmI CTGGAG 2 cut(s) 603, 1779
Bpu1102I GCTNAGC 1 cut(s) 2378
BpuEI CTTGAG 4 cut(s) 66, 1721, 2132, 2138
BpuMI CCSGG 3 cut(s) 103, 829, 1444
BsaBI GATNNNNATC 1 cut(s) 2577
BsaI GGTCTC 1 cut(s) 149
BsaJI CCNNGG 5 cut(s) 687, 1081, 1338, 1681, 1901
BsaWI WCCGGW 3 cut(s) 169, 488, 733
BsaXI ACNNNNNCTCC 4 cut(s) 1077, 1107, 1677, 1707
Bsc4I CCNNNNNNNGG 3 cut(s) 1059, 1982, 2353
Bse1I ACTGG 8 cut(s) 250, 757, 799, 1876, 2234, 2259, 2358, 2510
Bse3DI GCAATG 1 cut(s) 1323
Bse8I GATNNNNATC 1 cut(s) 2577
BseBI CCWGG 2 cut(s) 364, 2565
BseDI CCNNGG 5 cut(s) 687, 1081, 1338, 1681, 1901
BseGI GGATG 8 cut(s) 322, 1109, 1604, 1624, 1649, 1807, 2465, 2578
BseJI GATNNNNATC 1 cut(s) 2577
BseLI CCNNNNNNNGG 3 cut(s) 1059, 1982, 2353
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 4 cut(s) 615, 734, 1262, 1534
BseNI ACTGG 8 cut(s) 250, 757, 799, 1876, 2234, 2259, 2358, 2510
BseRI GAGGAG 2 cut(s) 1918, 1961
BseXI GCAGC 7 cut(s) 197, 1004, 1089, 1330, 1472, 1640, 2542
BseYI CCCAGC 1 cut(s) 1566
Bsh1236I CGCG 1 cut(s) 1388
Bsh1285I CGRYCG 1 cut(s) 119
BshFI GGCC 3 cut(s) 1476, 1680, 1954
BshNI GGYRCC 1 cut(s) 2434
BsiEI CGRYCG 1 cut(s) 119
BsiHKAI GWGCWC 4 cut(s) 90, 775, 1213, 1991
BsiHKCI CYCGRG 2 cut(s) 89, 1900
BsiSI CCGG 7 cut(s) 47, 102, 170, 489, 734, 828, 1443
BslFI GGGAC 3 cut(s) 499, 828, 1882
BslI CCNNNNNNNGG 3 cut(s) 1059, 1982, 2353
BsmAI GTCTC 3 cut(s) 149, 1220, 1755
BsmFI GGGAC 3 cut(s) 499, 828, 1882
BsmI GAATGC 1 cut(s) 415
BsnI GGCC 3 cut(s) 1476, 1680, 1954
Bso31I GGTCTC 1 cut(s) 149
BsoBI CYCGRG 2 cut(s) 89, 1900
Bsp1286I GDGCHC 4 cut(s) 90, 775, 1213, 1991
Bsp143I GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
Bsp1720I GCTNAGC 1 cut(s) 2378
Bsp19I CCATGG 2 cut(s) 1081, 1681
BspACI CCGC 7 cut(s) 314, 322, 885, 1193, 1395, 1473, 2522
BspANI GGCC 3 cut(s) 1476, 1680, 1954
BspCNI CTCAG 4 cut(s) 616, 735, 1263, 1533
BspFNI CGCG 1 cut(s) 1388
BspLI GGNNCC 4 cut(s) 487, 1898, 1953, 2436
BspMAI CTGCAG 1 cut(s) 1462
BspMI ACCTGC 1 cut(s) 179
BspPI GGATC 2 cut(s) 57, 744
BspQI GCTCTTC 3 cut(s) 12, 978, 1470
BspT107I GGYRCC 1 cut(s) 2434
BspTNI GGTCTC 1 cut(s) 149
BsrBI CCGCTC 1 cut(s) 1193
BsrDI GCAATG 1 cut(s) 1323
BsrI ACTGG 8 cut(s) 250, 757, 799, 1876, 2234, 2259, 2358, 2510
BssECI CCNNGG 5 cut(s) 687, 1081, 1338, 1681, 1901
BssMI GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
BssT1I CCWWGG 4 cut(s) 687, 1081, 1338, 1681
Bst2UI CCWGG 2 cut(s) 364, 2565
Bst4CI ACNGT 6 cut(s) 544, 944, 980, 1208, 2278, 2397
Bst6I CTCTTC 3 cut(s) 12, 978, 1470
BstAPI GCANNNNNTGC 1 cut(s) 194
BstC8I GCNNGC 9 cut(s) 108, 322, 571, 834, 1075, 1246, 1526, 1605, 2348
BstDEI CTNAG 7 cut(s) 11, 624, 743, 1271, 1520, 2311, 2378
BstDSI CCRYGG 2 cut(s) 1081, 1681
BstF5I GGATG 8 cut(s) 322, 1109, 1604, 1624, 1649, 1807, 2465, 2578
BstFNI CGCG 1 cut(s) 1388
BstHHI GCGC 1 cut(s) 601
BstKTI GATC 7 cut(s) 52, 471, 739, 1642, 1924, 2098, 2481
BstMAI GTCTC 3 cut(s) 149, 1220, 1755
BstMBI GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
BstMCI CGRYCG 1 cut(s) 119
BstNI CCWGG 2 cut(s) 364, 2565
BstNSI RCATGY 2 cut(s) 2319, 2341
BstSCI CCNGG 5 cut(s) 101, 362, 827, 1442, 2563
BstSFI CTRYAG 2 cut(s) 1458, 2196
BstUI CGCG 1 cut(s) 1388
BstV1I GCAGC 7 cut(s) 197, 1004, 1089, 1330, 1472, 1640, 2542
BstX2I RGATCY 1 cut(s) 49
BstXI CCANNNNNNTGG 1 cut(s) 2482
BstYI RGATCY 1 cut(s) 49
BsuRI GGCC 3 cut(s) 1476, 1680, 1954
BtgI CCRYGG 2 cut(s) 1081, 1681
BtgZI GCGATG 1 cut(s) 1368
BtsCI GGATG 8 cut(s) 322, 1109, 1604, 1624, 1649, 1807, 2465, 2578
BtsI GCAGTG 3 cut(s) 420, 1915, 2253
BtsIMutI CAGTG 8 cut(s) 236, 420, 540, 1213, 1915, 1975, 2241, 2253
BveI ACCTGC 1 cut(s) 179
Cac8I GCNNGC 9 cut(s) 108, 322, 571, 834, 1075, 1246, 1526, 1605, 2348
CaiI CAGNNNCTG 2 cut(s) 238, 2353
CfoI GCGC 1 cut(s) 601
Cfr13I GGNCC 7 cut(s) 445, 486, 1294, 1896, 1952, 1973, 2561
CseI GACGC 2 cut(s) 1250, 1377
Csp6I GTAC 2 cut(s) 1363, 1384
CviQI GTAC 2 cut(s) 1363, 1384
DdeI CTNAG 7 cut(s) 11, 624, 743, 1271, 1520, 2311, 2378
DpnI GATC 7 cut(s) 51, 470, 738, 1641, 1923, 2097, 2480
DpnII GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
DraI TTTAAA 1 cut(s) 2136
DriI GACNNNNNGTC 2 cut(s) 451, 544
EaeI YGGCCR 1 cut(s) 1678
Eam1104I CTCTTC 3 cut(s) 12, 978, 1470
Eam1105I GACNNNNNGTC 2 cut(s) 451, 544
EarI CTCTTC 3 cut(s) 12, 978, 1470
Eco130I CCWWGG 4 cut(s) 687, 1081, 1338, 1681
Eco31I GGTCTC 1 cut(s) 149
Eco32I GATATC 2 cut(s) 1048, 2061
Eco47I GGWCC 6 cut(s) 445, 486, 1294, 1896, 1973, 2561
Eco57I CTGAAG 2 cut(s) 615, 1569
Eco88I CYCGRG 2 cut(s) 89, 1900
EcoO109I RGGNCCY 4 cut(s) 445, 1294, 1952, 2561
EcoRI GAATTC 3 cut(s) 525, 698, 2210
EcoRII CCWGG 2 cut(s) 362, 2563
EcoRV GATATC 2 cut(s) 1048, 2061
EcoT14I CCWWGG 4 cut(s) 687, 1081, 1338, 1681
EcoT22I ATGCAT 1 cut(s) 1651
ErhI CCWWGG 4 cut(s) 687, 1081, 1338, 1681
FaqI GGGAC 3 cut(s) 499, 828, 1882
FauI CCCGC 3 cut(s) 329, 1186, 2515
FauNDI CATATG 1 cut(s) 814
FbaI TGATCA 1 cut(s) 1921
FblI GTMKAC 3 cut(s) 38, 939, 1176
Fnu4HI GCNGC 8 cut(s) 186, 993, 1078, 1344, 1461, 1474, 1629, 2531
FokI GGATG 8 cut(s) 329, 1116, 1611, 1631, 1636, 1814, 2472, 2585
Fsp4HI GCNGC 8 cut(s) 186, 993, 1078, 1344, 1461, 1474, 1629, 2531
FspBI CTAG 3 cut(s) 393, 1643, 2064
GlaI GCGC 1 cut(s) 600
GluI GCNGC 8 cut(s) 186, 993, 1078, 1344, 1461, 1474, 1629, 2531
GsaI CCCAGC 1 cut(s) 1570
GsuI CTGGAG 2 cut(s) 603, 1779
HaeIII GGCC 3 cut(s) 1476, 1680, 1954
HapII CCGG 7 cut(s) 47, 102, 170, 489, 734, 828, 1443
HgaI GACGC 2 cut(s) 1250, 1377
HhaI GCGC 1 cut(s) 601
Hin6I GCGC 1 cut(s) 599
HinP1I GCGC 1 cut(s) 599
HincII GTYRAC 2 cut(s) 39, 1177
HindII GTYRAC 2 cut(s) 39, 1177
HindIII AAGCTT 1 cut(s) 1785
HpaII CCGG 7 cut(s) 47, 102, 170, 489, 734, 828, 1443
HphI GGTGA 5 cut(s) 1042, 1409, 1715, 2054, 2213
Hpy166II GTNNAC 6 cut(s) 39, 682, 940, 1177, 1817, 1869
Hpy8I GTNNAC 6 cut(s) 39, 682, 940, 1177, 1817, 1869
HpyAV CCTTC 6 cut(s) 1063, 1190, 1877, 2062, 2116, 2552
HpyCH4III ACNGT 6 cut(s) 544, 944, 980, 1208, 2278, 2397
HpyF3I CTNAG 7 cut(s) 11, 624, 743, 1271, 1520, 2311, 2378
HspAI GCGC 1 cut(s) 599
Ksp22I TGATCA 1 cut(s) 1921
Kzo9I GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
LguI GCTCTTC 3 cut(s) 12, 978, 1470
LmnI GCTCC 3 cut(s) 1350, 1905, 1986
Lsp1109I GCAGC 7 cut(s) 197, 1004, 1089, 1330, 1472, 1640, 2542
LweI GCATC 8 cut(s) 307, 609, 1609, 1636, 1658, 1800, 2450, 2563
MaeI CTAG 3 cut(s) 393, 1643, 2064
MaeIII GTNAC 3 cut(s) 254, 2201, 2251
MalI GATC 7 cut(s) 51, 470, 738, 1641, 1923, 2097, 2480
MbiI CCGCTC 1 cut(s) 1193
MboI GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
MflI RGATCY 1 cut(s) 49
MhlI GDGCHC 4 cut(s) 90, 775, 1213, 1991
MlsI TGGCCA 1 cut(s) 1680
MluI ACGCGT 1 cut(s) 1386
MluNI TGGCCA 1 cut(s) 1680
MlyI GAGTC 7 cut(s) 73, 623, 1259, 1448, 1480, 2175, 2424
MmeI TCCRAC 3 cut(s) 926, 1808, 2000
Mox20I TGGCCA 1 cut(s) 1680
Mph1103I ATGCAT 1 cut(s) 1651
MroXI GAANNNNTTC 2 cut(s) 1004, 2225
MscI TGGCCA 1 cut(s) 1680
MseI TTAA 3 cut(s) 1067, 1889, 2135
MslI CAYNNNNRTG 3 cut(s) 813, 1417, 2474
Msp20I TGGCCA 1 cut(s) 1680
MspA1I CMGCKG 1 cut(s) 1757
MspI CCGG 7 cut(s) 47, 102, 170, 489, 734, 828, 1443
MspR9I CCNGG 5 cut(s) 103, 364, 829, 1444, 2565
Mva1269I GAATGC 1 cut(s) 415
MvaI CCWGG 2 cut(s) 364, 2565
MvnI CGCG 1 cut(s) 1388
NciI CCSGG 3 cut(s) 103, 829, 1444
NcoI CCATGG 2 cut(s) 1081, 1681
NdeI CATATG 1 cut(s) 814
NdeII GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
NlaIV GGNNCC 4 cut(s) 487, 1898, 1953, 2436
NmuCI GTSAC 3 cut(s) 254, 2201, 2251
NsiI ATGCAT 1 cut(s) 1651
NspI RCATGY 2 cut(s) 2319, 2341
PaeR7I CTCGAG 1 cut(s) 89
PciSI GCTCTTC 3 cut(s) 12, 978, 1470
PctI GAATGC 1 cut(s) 415
PdmI GAANNNNTTC 2 cut(s) 1004, 2225
PfeI GAWTC 8 cut(s) 306, 1118, 1285, 2045, 2182, 2516, 2537, 2594
PflFI GACNNNGTC 1 cut(s) 141
PflMI CCANNNNNTGG 2 cut(s) 1982, 2353
PfoI TCCNGGA 1 cut(s) 1442
PkrI GCNGC 8 cut(s) 187, 994, 1079, 1345, 1462, 1475, 1630, 2532
PleI GAGTC 7 cut(s) 73, 622, 1258, 1447, 1480, 2174, 2423
PpsI GAGTC 7 cut(s) 73, 622, 1258, 1447, 1480, 2174, 2423
PpuMI RGGWCCY 3 cut(s) 445, 1294, 2561
Psp5II RGGWCCY 3 cut(s) 445, 1294, 2561
Psp6I CCWGG 2 cut(s) 362, 2563
PspFI CCCAGC 1 cut(s) 1566
PspGI CCWGG 2 cut(s) 362, 2563
PspN4I GGNNCC 4 cut(s) 487, 1898, 1953, 2436
PspPI GGNCC 7 cut(s) 445, 486, 1294, 1896, 1952, 1973, 2561
PspPPI RGGWCCY 3 cut(s) 445, 1294, 2561
PspXI VCTCGAGB 1 cut(s) 89
PstI CTGCAG 1 cut(s) 1462
PstNI CAGNNNCTG 2 cut(s) 238, 2353
PsuI RGATCY 1 cut(s) 49
PsyI GACNNNGTC 1 cut(s) 141
PvuII CAGCTG 1 cut(s) 1757
RsaI GTAC 2 cut(s) 1364, 1385
RsaNI GTAC 2 cut(s) 1363, 1384
RseI CAYNNNNRTG 3 cut(s) 813, 1417, 2474
SalI GTCGAC 2 cut(s) 37, 1175
SapI GCTCTTC 3 cut(s) 12, 978, 1470
SaqAI TTAA 3 cut(s) 1067, 1889, 2135
SatI GCNGC 8 cut(s) 186, 993, 1078, 1344, 1461, 1474, 1629, 2531
Sau3AI GATC 7 cut(s) 49, 468, 736, 1639, 1921, 2095, 2478
Sau96I GGNCC 7 cut(s) 445, 486, 1294, 1896, 1952, 1973, 2561
SchI GAGTC 7 cut(s) 73, 623, 1259, 1448, 1480, 2175, 2424
ScrFI CCNGG 5 cut(s) 103, 364, 829, 1444, 2565
SduI GDGCHC 4 cut(s) 90, 775, 1213, 1991
SfaNI GCATC 8 cut(s) 307, 609, 1609, 1636, 1658, 1800, 2450, 2563
SfcI CTRYAG 2 cut(s) 1458, 2196
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 6 cut(s) 445, 486, 1294, 1896, 1973, 2561
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 3 cut(s) 813, 1417, 2474
SmlI CTYRAG 5 cut(s) 81, 89, 1736, 2111, 2117
SmoI CTYRAG 5 cut(s) 81, 89, 1736, 2111, 2117
SsiI CCGC 7 cut(s) 314, 322, 885, 1193, 1395, 1473, 2522
SspI AATATT 3 cut(s) 70, 463, 727
SspMI CTAG 3 cut(s) 393, 1643, 2064
StyD4I CCNGG 5 cut(s) 101, 362, 827, 1442, 2563
StyI CCWWGG 4 cut(s) 687, 1081, 1338, 1681
TaaI ACNGT 6 cut(s) 544, 944, 980, 1208, 2278, 2397
TaqII GACCGA 1 cut(s) 105
TatI WGTACW 1 cut(s) 1362
TauI GCSGC 1 cut(s) 1476
TfiI GAWTC 8 cut(s) 306, 1118, 1285, 2045, 2182, 2516, 2537, 2594
Tru1I TTAA 3 cut(s) 1067, 1889, 2135
Tru9I TTAA 3 cut(s) 1067, 1889, 2135
TscAI CASTG 8 cut(s) 243, 420, 547, 1213, 1915, 1975, 2241, 2260
TseFI GTSAC 3 cut(s) 254, 2201, 2251
TseI GCWGC 7 cut(s) 185, 992, 1077, 1343, 1460, 1628, 2530
Tsp45I GTSAC 3 cut(s) 254, 2201, 2251
TspDTI ATGAA 9 cut(s) 590, 728, 1045, 1277, 1334, 1448, 1758, 1818, 2385
TspGWI ACGGA 2 cut(s) 243, 2585
TspRI CASTG 8 cut(s) 243, 420, 547, 1213, 1915, 1975, 2241, 2260
Tth111I GACNNNGTC 1 cut(s) 141
Van91I CCANNNNNTGG 2 cut(s) 1982, 2353
VpaK11BI GGWCC 6 cut(s) 445, 486, 1294, 1896, 1973, 2561
XapI RAATTY 5 cut(s) 525, 698, 1703, 2210, 2225
XbaI TCTAGA 1 cut(s) 1642
XceI RCATGY 2 cut(s) 2319, 2341
XhoI CTCGAG 1 cut(s) 89
XmiI GTMKAC 3 cut(s) 38, 939, 1176
XmnI GAANNNNTTC 2 cut(s) 1004, 2225
XspI CTAG 3 cut(s) 393, 1643, 2064
Zsp2I ATGCAT 1 cut(s) 1651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.