Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09190 |
| fragaria_vesca | FvH4_1g08040 |
| malus_domestica | MD02G1085000.v1.1 |
| prunus_persica | Prupe.7G204600_v2.0.a1 |
| pyrus_communis | pycom02g06780 pycom02g20400 |
| rosa_chinensis | RchiOBHm_Chr1g0349371 RchiOBHm_Chr1g0365421 RchiOBHm_Chr2g0094071 RchiOBHm_Chr2g0100501 RchiOBHm_Chr2g0145241 RchiOBHm_Chr5g0027681 |
| rosa_laevigata | RLG00000016453 RLG00000016978 RLG00000028565 |
| rosa_multiflora | Rmu_sc0000528.1_g000021 Rmu_sc0001942.1_g000078 Rmu_sc0001989.1_g000005 Rmu_sc0001989.1_g000006 Rmu_sc0002834.1_g000001 Rmu_sc0010460.1_g000009 Rmu_sc0015757.1_g000001 Rmu_sc0023774.1_g000001 Rmu_ssc0000469.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00065660 Rroxscaffold_2G00147500 |
| rosa_rugosa | Rorug01G0191200 Rorug01G0245800 Rorug01G0404500 Rorug02G0040700 Rorug02G0042900 Rorug02G0088700 Rorug02G0306900 Rorug02G0425200 RorugPtG0000800 |
| rosa_samantha | Rh1BG121500 Rh2BG141500 Rh2BG455200 Rh2CG090800 Rh2CG143700 Rh2DG465200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 20, 68 |
| AcsI | RAATTY | 1 cut(s) | 148 |
| AgsI | TTSAA | 1 cut(s) | 326 |
| AluBI | AGCT | 1 cut(s) | 287 |
| AluI | AGCT | 1 cut(s) | 287 |
| Alw26I | GTCTC | 1 cut(s) | 299 |
| AlwI | GGATC | 2 cut(s) | 20, 68 |
| ApoI | RAATTY | 1 cut(s) | 148 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 41, 110 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 230 |
| AxyI | CCTNAGG | 1 cut(s) | 50 |
| BccI | CCATC | 2 cut(s) | 208, 383 |
| BciVI | GTATCC | 1 cut(s) | 393 |
| BcoDI | GTCTC | 1 cut(s) | 299 |
| BfuI | GTATCC | 1 cut(s) | 393 |
| BmrI | ACTGGG | 1 cut(s) | 201 |
| BmsI | GCATC | 1 cut(s) | 88 |
| BmuI | ACTGGG | 1 cut(s) | 201 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BsaWI | WCCGGW | 1 cut(s) | 328 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 79, 109, 265, 295 |
| Bse1I | ACTGG | 1 cut(s) | 196 |
| Bse21I | CCTNAGG | 1 cut(s) | 50 |
| Bse3DI | GCAATG | 2 cut(s) | 187, 401 |
| BseGI | GGATG | 2 cut(s) | 337, 385 |
| BseMI | GCAATG | 2 cut(s) | 187, 401 |
| BseNI | ACTGG | 1 cut(s) | 196 |
| BsgI | GTGCAG | 1 cut(s) | 284 |
| BsiSI | CCGG | 1 cut(s) | 329 |
| BslFI | GGGAC | 1 cut(s) | 290 |
| BsmAI | GTCTC | 1 cut(s) | 299 |
| BsmFI | GGGAC | 1 cut(s) | 290 |
| Bsp143I | GATC | 2 cut(s) | 12, 60 |
| BspPI | GGATC | 2 cut(s) | 20, 68 |
| BsrDI | GCAATG | 2 cut(s) | 187, 401 |
| BsrI | ACTGG | 1 cut(s) | 196 |
| BssMI | GATC | 2 cut(s) | 12, 60 |
| Bst4CI | ACNGT | 2 cut(s) | 281, 343 |
| BstC8I | GCNNGC | 2 cut(s) | 360, 364 |
| BstDEI | CTNAG | 2 cut(s) | 50, 259 |
| BstF5I | GGATG | 2 cut(s) | 337, 385 |
| BstKTI | GATC | 2 cut(s) | 15, 63 |
| BstMAI | GTCTC | 1 cut(s) | 299 |
| BstMBI | GATC | 2 cut(s) | 12, 60 |
| Bsu36I | CCTNAGG | 1 cut(s) | 50 |
| BsuI | GTATCC | 1 cut(s) | 393 |
| BtsCI | GGATG | 2 cut(s) | 337, 385 |
| BtsI | GCAGTG | 1 cut(s) | 272 |
| BtsIMutI | CAGTG | 2 cut(s) | 272, 286 |
| Cac8I | GCNNGC | 2 cut(s) | 360, 364 |
| CviAII | CATG | 2 cut(s) | 255, 309 |
| CviJI | RGCY | 2 cut(s) | 287, 338 |
| CviKI_1 | RGCY | 2 cut(s) | 287, 338 |
| DdeI | CTNAG | 2 cut(s) | 50, 259 |
| DpnI | GATC | 2 cut(s) | 14, 62 |
| DpnII | GATC | 2 cut(s) | 12, 60 |
| Eco81I | CCTNAGG | 1 cut(s) | 50 |
| FaeI | CATG | 2 cut(s) | 258, 312 |
| FaiI | YATR | 4 cut(s) | 75, 256, 310, 411 |
| FaqI | GGGAC | 1 cut(s) | 290 |
| FatI | CATG | 2 cut(s) | 254, 308 |
| FokI | GGATG | 2 cut(s) | 344, 392 |
| HapII | CCGG | 1 cut(s) | 329 |
| Hin1II | CATG | 2 cut(s) | 258, 312 |
| HindIII | AAGCTT | 1 cut(s) | 285 |
| HinfI | GANTC | 2 cut(s) | 157, 416 |
| HpaII | CCGG | 1 cut(s) | 329 |
| HphI | GGTGA | 2 cut(s) | 107, 230 |
| HpyAV | CCTTC | 1 cut(s) | 100 |
| HpyCH4III | ACNGT | 2 cut(s) | 281, 343 |
| HpyCH4V | TGCA | 4 cut(s) | 101, 265, 413, 432 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 259 |
| Hsp92II | CATG | 2 cut(s) | 258, 312 |
| Kzo9I | GATC | 2 cut(s) | 12, 60 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| LpnPI | CCDG | 4 cut(s) | 177, 302, 342, 372 |
| LweI | GCATC | 1 cut(s) | 88 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 2 cut(s) | 14, 62 |
| MboI | GATC | 2 cut(s) | 12, 60 |
| MboII | GAAGA | 2 cut(s) | 37, 223 |
| MluCI | AATT | 2 cut(s) | 31, 148 |
| MnlI | CCTC | 5 cut(s) | 81, 85, 216, 267, 328 |
| MroXI | GAANNNNTTC | 2 cut(s) | 41, 110 |
| MseI | TTAA | 1 cut(s) | 300 |
| MslI | CAYNNNNRTG | 1 cut(s) | 408 |
| MspI | CCGG | 1 cut(s) | 329 |
| NdeII | GATC | 2 cut(s) | 12, 60 |
| NlaIII | CATG | 2 cut(s) | 258, 312 |
| NmuCI | GTSAC | 1 cut(s) | 76 |
| PdmI | GAANNNNTTC | 2 cut(s) | 41, 110 |
| PfeI | GAWTC | 2 cut(s) | 157, 416 |
| RseI | CAYNNNNRTG | 1 cut(s) | 408 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| Sau3AI | GATC | 2 cut(s) | 12, 60 |
| SetI | ASST | 2 cut(s) | 111, 289 |
| SfaNI | GCATC | 1 cut(s) | 88 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 408 |
| Sse9I | AATT | 2 cut(s) | 31, 148 |
| SspI | AATATT | 1 cut(s) | 42 |
| TaaI | ACNGT | 2 cut(s) | 281, 343 |
| TaqI | TCGA | 3 cut(s) | 114, 186, 245 |
| TasI | AATT | 2 cut(s) | 31, 148 |
| TfiI | GAWTC | 2 cut(s) | 157, 416 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TscAI | CASTG | 2 cut(s) | 272, 286 |
| TseFI | GTSAC | 1 cut(s) | 76 |
| Tsp45I | GTSAC | 1 cut(s) | 76 |
| TspDTI | ATGAA | 2 cut(s) | 132, 243 |
| TspRI | CASTG | 2 cut(s) | 272, 286 |
| XapI | RAATTY | 1 cut(s) | 148 |
| XmnI | GAANNNNTTC | 2 cut(s) | 41, 110 |