Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09190 |
| fragaria_vesca | FvH4_1g08040 |
| malus_domestica | MD02G1085000.v1.1 |
| prunus_persica | Prupe.7G204600_v2.0.a1 |
| pyrus_communis | pycom02g06780 pycom02g20400 |
| rosa_chinensis | RchiOBHm_Chr1g0349371 RchiOBHm_Chr1g0365421 RchiOBHm_Chr2g0094071 RchiOBHm_Chr2g0100501 RchiOBHm_Chr2g0145241 RchiOBHm_Chr5g0027681 |
| rosa_laevigata | RLG00000016453 RLG00000016978 RLG00000028565 |
| rosa_multiflora | Rmu_sc0000528.1_g000021 Rmu_sc0001942.1_g000078 Rmu_sc0001989.1_g000005 Rmu_sc0001989.1_g000006 Rmu_sc0002834.1_g000001 Rmu_sc0010460.1_g000009 Rmu_sc0015757.1_g000001 Rmu_sc0023774.1_g000001 Rmu_ssc0000469.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00065660 Rroxscaffold_2G00147500 |
| rosa_rugosa | Rorug01G0191200 Rorug01G0245800 Rorug01G0404500 Rorug02G0040700 Rorug02G0042900 Rorug02G0088700 Rorug02G0306900 Rorug02G0425200 RorugPtG0000800 |
| rosa_samantha | Rh1BG121500 Rh2BG141500 Rh2BG455200 Rh2CG090800 Rh2CG143700 Rh2DG465200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 227 |
| AcyI | GRCGYC | 1 cut(s) | 207 |
| AgsI | TTSAA | 2 cut(s) | 14, 83 |
| AluBI | AGCT | 2 cut(s) | 10, 17 |
| AluI | AGCT | 2 cut(s) | 10, 17 |
| Alw26I | GTCTC | 1 cut(s) | 56 |
| AspLEI | GCGC | 1 cut(s) | 228 |
| AsuII | TTCGAA | 1 cut(s) | 217 |
| BaeGI | GKGCMC | 1 cut(s) | 243 |
| BccI | CCATC | 2 cut(s) | 140, 251 |
| BceAI | ACGGC | 1 cut(s) | 194 |
| BciVI | GTATCC | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 56 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BfuI | GTATCC | 1 cut(s) | 150 |
| Bpu14I | TTCGAA | 1 cut(s) | 217 |
| BsaHI | GRCGYC | 1 cut(s) | 207 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 22, 52 |
| BseGI | GGATG | 2 cut(s) | 142, 243 |
| BseSI | GKGCMC | 1 cut(s) | 243 |
| BslFI | GGGAC | 1 cut(s) | 47 |
| BsmAI | GTCTC | 1 cut(s) | 56 |
| BsmFI | GGGAC | 1 cut(s) | 47 |
| Bsp119I | TTCGAA | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 1 cut(s) | 243 |
| BspT104I | TTCGAA | 1 cut(s) | 217 |
| BssNI | GRCGYC | 1 cut(s) | 207 |
| Bst4CI | ACNGT | 3 cut(s) | 38, 100, 238 |
| BstACI | GRCGYC | 1 cut(s) | 207 |
| BstBI | TTCGAA | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 2 cut(s) | 117, 121 |
| BstF5I | GGATG | 2 cut(s) | 142, 243 |
| BstHHI | GCGC | 1 cut(s) | 228 |
| BstMAI | GTCTC | 1 cut(s) | 56 |
| BstSLI | GKGCMC | 1 cut(s) | 243 |
| BsuI | GTATCC | 1 cut(s) | 150 |
| BtsCI | GGATG | 2 cut(s) | 142, 243 |
| BtsIMutI | CAGTG | 1 cut(s) | 43 |
| Cac8I | GCNNGC | 2 cut(s) | 117, 121 |
| CfoI | GCGC | 1 cut(s) | 228 |
| CseI | GACGC | 1 cut(s) | 215 |
| CviAII | CATG | 1 cut(s) | 66 |
| CviJI | RGCY | 3 cut(s) | 10, 17, 95 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 17, 95 |
| FaeI | CATG | 1 cut(s) | 69 |
| FaiI | YATR | 2 cut(s) | 67, 168 |
| FaqI | GGGAC | 1 cut(s) | 47 |
| FatI | CATG | 1 cut(s) | 65 |
| FokI | GGATG | 2 cut(s) | 149, 230 |
| FspBI | CTAG | 1 cut(s) | 203 |
| FspI | TGCGCA | 1 cut(s) | 227 |
| GlaI | GCGC | 1 cut(s) | 227 |
| HgaI | GACGC | 1 cut(s) | 215 |
| HhaI | GCGC | 1 cut(s) | 228 |
| Hin1I | GRCGYC | 1 cut(s) | 207 |
| Hin1II | CATG | 1 cut(s) | 69 |
| Hin6I | GCGC | 1 cut(s) | 226 |
| HinP1I | GCGC | 1 cut(s) | 226 |
| HindIII | AAGCTT | 2 cut(s) | 8, 15 |
| HinfI | GANTC | 1 cut(s) | 173 |
| HpyCH4III | ACNGT | 3 cut(s) | 38, 100, 238 |
| HpyCH4V | TGCA | 2 cut(s) | 170, 189 |
| Hsp92I | GRCGYC | 1 cut(s) | 207 |
| Hsp92II | CATG | 1 cut(s) | 69 |
| HspAI | GCGC | 1 cut(s) | 226 |
| LmnI | GCTCC | 1 cut(s) | 70 |
| LpnPI | CCDG | 3 cut(s) | 59, 99, 129 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MhlI | GDGCHC | 1 cut(s) | 243 |
| MluCI | AATT | 1 cut(s) | 22 |
| MnlI | CCTC | 2 cut(s) | 24, 85 |
| MseI | TTAA | 3 cut(s) | 5, 21, 57 |
| MslI | CAYNNNNRTG | 1 cut(s) | 165 |
| NlaIII | CATG | 1 cut(s) | 69 |
| NsbI | TGCGCA | 1 cut(s) | 227 |
| NspV | TTCGAA | 1 cut(s) | 217 |
| PfeI | GAWTC | 1 cut(s) | 173 |
| RseI | CAYNNNNRTG | 1 cut(s) | 165 |
| SaqAI | TTAA | 3 cut(s) | 5, 21, 57 |
| SduI | GDGCHC | 1 cut(s) | 243 |
| SetI | ASST | 3 cut(s) | 12, 19, 224 |
| SfuI | TTCGAA | 1 cut(s) | 217 |
| SgeI | CNNG | 9 cut(s) | 23, 78, 86, 98, 128, 132, 202, 215, 235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 165 |
| Sse9I | AATT | 1 cut(s) | 22 |
| SspMI | CTAG | 1 cut(s) | 203 |
| TaaI | ACNGT | 3 cut(s) | 38, 100, 238 |
| TaqI | TCGA | 1 cut(s) | 217 |
| TasI | AATT | 1 cut(s) | 22 |
| TfiI | GAWTC | 1 cut(s) | 173 |
| Tru1I | TTAA | 3 cut(s) | 5, 21, 57 |
| Tru9I | TTAA | 3 cut(s) | 5, 21, 57 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TspRI | CASTG | 1 cut(s) | 43 |
| XspI | CTAG | 1 cut(s) | 203 |