Lysosomal Pro-X
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 929 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 796, 1274 |
| Acc36I | ACCTGC | 1 cut(s) | 929 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 267 |
| AccII | CGCG | 1 cut(s) | 1173 |
| AciI | CCGC | 3 cut(s) | 885, 1171, 1285 |
| AclWI | GGATC | 2 cut(s) | 152, 442 |
| AcoI | YGGCCR | 1 cut(s) | 1168 |
| AcsI | RAATTY | 5 cut(s) | 66, 474, 767, 1007, 1022 |
| AcuI | CTGAAG | 2 cut(s) | 155, 762 |
| AfaI | GTAC | 1 cut(s) | 410 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 89, 267, 347, 653, 1177 |
| AflIII | ACRYGT | 2 cut(s) | 484, 947 |
| AgeI | ACCGGT | 1 cut(s) | 405 |
| AgsI | TTSAA | 7 cut(s) | 64, 208, 229, 239, 380, 671, 1343 |
| AjiI | CACGTC | 2 cut(s) | 586, 795 |
| AjnI | CCWGG | 2 cut(s) | 1055, 1112 |
| Alw21I | GWGCWC | 4 cut(s) | 292, 405, 601, 807 |
| Alw26I | GTCTC | 3 cut(s) | 674, 1146, 1230 |
| Alw44I | GTGCAC | 1 cut(s) | 288 |
| AlwI | GGATC | 2 cut(s) | 152, 442 |
| AoxI | GGCC | 6 cut(s) | 124, 603, 745, 1058, 1087, 1168 |
| ApaLI | GTGCAC | 1 cut(s) | 288 |
| ApeKI | GCWGC | 2 cut(s) | 496, 839 |
| ApoI | RAATTY | 5 cut(s) | 66, 474, 767, 1007, 1022 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1208, 1240 |
| AsiGI | ACCGGT | 1 cut(s) | 405 |
| AspLEI | GCGC | 1 cut(s) | 314 |
| AsuHPI | GGTGA | 2 cut(s) | 973, 1081 |
| BaeGI | GKGCMC | 1 cut(s) | 292 |
| BanII | GRGCYC | 2 cut(s) | 601, 807 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 209, 241 |
| BbsI | GAAGAC | 1 cut(s) | 1188 |
| Bbv12I | GWGCWC | 4 cut(s) | 292, 405, 601, 807 |
| BbvI | GCAGC | 2 cut(s) | 508, 851 |
| BccI | CCATC | 3 cut(s) | 890, 1308, 1312 |
| BciT130I | CCWGG | 2 cut(s) | 1057, 1114 |
| BciVI | GTATCC | 2 cut(s) | 588, 650 |
| BclI | TGATCA | 1 cut(s) | 252 |
| BcoDI | GTCTC | 3 cut(s) | 674, 1146, 1230 |
| BfaI | CTAG | 2 cut(s) | 675, 834 |
| BfmI | CTRYAG | 2 cut(s) | 876, 909 |
| BfuAI | ACCTGC | 1 cut(s) | 929 |
| BfuI | GTATCC | 2 cut(s) | 588, 650 |
| BglII | AGATCT | 1 cut(s) | 166 |
| BisI | GCNGC | 3 cut(s) | 497, 840, 1171 |
| BlsI | GCNGC | 3 cut(s) | 498, 841, 1172 |
| Bme1390I | CCNGG | 2 cut(s) | 1057, 1114 |
| BmgBI | CACGTC | 2 cut(s) | 586, 795 |
| BmiI | GGNNCC | 2 cut(s) | 277, 353 |
| BmrFI | CCNGG | 2 cut(s) | 1057, 1114 |
| BmrI | ACTGGG | 1 cut(s) | 126 |
| BmuI | ACTGGG | 1 cut(s) | 126 |
| BpiI | GAAGAC | 1 cut(s) | 1188 |
| BpmI | CTGGAG | 3 cut(s) | 108, 371, 630 |
| BpuEI | CTTGAG | 2 cut(s) | 736, 791 |
| BsaI | GGTCTC | 2 cut(s) | 1146, 1230 |
| BsaJI | CCNNGG | 2 cut(s) | 71, 1055 |
| BsaWI | WCCGGW | 2 cut(s) | 405, 517 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 89, 267, 347, 653, 1177 |
| Bse118I | RCCGGY | 1 cut(s) | 405 |
| Bse1I | ACTGG | 3 cut(s) | 91, 132, 1274 |
| BseBI | CCWGG | 2 cut(s) | 1057, 1114 |
| BseDI | CCNNGG | 2 cut(s) | 71, 1055 |
| BseGI | GGATG | 2 cut(s) | 1319, 1323 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 89, 267, 347, 653, 1177 |
| BseMII | CTCAG | 3 cut(s) | 66, 68, 792 |
| BseNI | ACTGG | 3 cut(s) | 91, 132, 1274 |
| BseSI | GKGCMC | 1 cut(s) | 292 |
| BseXI | GCAGC | 2 cut(s) | 508, 851 |
| Bsh1236I | CGCG | 1 cut(s) | 1173 |
| Bsh1285I | CGRYCG | 1 cut(s) | 853 |
| BshFI | GGCC | 6 cut(s) | 126, 605, 747, 1060, 1089, 1170 |
| BshTI | ACCGGT | 1 cut(s) | 405 |
| BsiEI | CGRYCG | 1 cut(s) | 853 |
| BsiHKAI | GWGCWC | 4 cut(s) | 292, 405, 601, 807 |
| BsiSI | CCGG | 2 cut(s) | 406, 518 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 89, 267, 347, 653, 1177 |
| BsmAI | GTCTC | 3 cut(s) | 674, 1146, 1230 |
| BsmI | GAATGC | 1 cut(s) | 555 |
| BsnI | GGCC | 6 cut(s) | 126, 605, 747, 1060, 1089, 1170 |
| Bso31I | GGTCTC | 2 cut(s) | 1146, 1230 |
| Bsp1286I | GDGCHC | 4 cut(s) | 292, 405, 601, 807 |
| Bsp143I | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| BspACI | CCGC | 3 cut(s) | 885, 1171, 1285 |
| BspANI | GGCC | 6 cut(s) | 126, 605, 747, 1060, 1089, 1170 |
| BspCNI | CTCAG | 3 cut(s) | 65, 69, 793 |
| BspFNI | CGCG | 1 cut(s) | 1173 |
| BspLI | GGNNCC | 2 cut(s) | 277, 353 |
| BspMI | ACCTGC | 1 cut(s) | 929 |
| BspPI | GGATC | 2 cut(s) | 152, 442 |
| BspTNI | GGTCTC | 2 cut(s) | 1146, 1230 |
| BsrFI | RCCGGY | 1 cut(s) | 405 |
| BsrI | ACTGG | 3 cut(s) | 91, 132, 1274 |
| BssAI | RCCGGY | 1 cut(s) | 405 |
| BssECI | CCNNGG | 2 cut(s) | 71, 1055 |
| BssMI | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| BssT1I | CCWWGG | 1 cut(s) | 71 |
| Bst2UI | CCWGG | 2 cut(s) | 1057, 1114 |
| Bst4CI | ACNGT | 4 cut(s) | 786, 877, 1163, 1196 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 467 |
| BstC8I | GCNNGC | 2 cut(s) | 555, 1045 |
| BstDEI | CTNAG | 7 cut(s) | 52, 77, 307, 758, 801, 1103, 1148 |
| BstF5I | GGATG | 2 cut(s) | 1319, 1323 |
| BstFNI | CGCG | 1 cut(s) | 1173 |
| BstHHI | GCGC | 1 cut(s) | 314 |
| BstKTI | GATC | 6 cut(s) | 160, 169, 255, 437, 853, 1015 |
| BstMAI | GTCTC | 3 cut(s) | 674, 1146, 1230 |
| BstMBI | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| BstMCI | CGRYCG | 1 cut(s) | 853 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 467, 596, 611, 839, 1044 |
| BstNI | CCWGG | 2 cut(s) | 1057, 1114 |
| BstNSI | RCATGY | 3 cut(s) | 488, 506, 951 |
| BstSCI | CCNGG | 2 cut(s) | 1055, 1112 |
| BstSFI | CTRYAG | 2 cut(s) | 876, 909 |
| BstSLI | GKGCMC | 1 cut(s) | 292 |
| BstUI | CGCG | 1 cut(s) | 1173 |
| BstV1I | GCAGC | 2 cut(s) | 508, 851 |
| BstV2I | GAAGAC | 1 cut(s) | 1188 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| BsuI | GTATCC | 2 cut(s) | 588, 650 |
| BsuRI | GGCC | 6 cut(s) | 126, 605, 747, 1060, 1089, 1170 |
| BtrI | CACGTC | 2 cut(s) | 586, 795 |
| BtsCI | GGATG | 2 cut(s) | 1319, 1323 |
| BtsI | GCAGTG | 1 cut(s) | 1228 |
| BtsIMutI | CAGTG | 4 cut(s) | 139, 292, 1201, 1228 |
| BveI | ACCTGC | 1 cut(s) | 929 |
| Cac8I | GCNNGC | 2 cut(s) | 555, 1045 |
| CfoI | GCGC | 1 cut(s) | 314 |
| Cfr10I | RCCGGY | 1 cut(s) | 405 |
| Csp6I | GTAC | 1 cut(s) | 409 |
| CspAI | ACCGGT | 1 cut(s) | 405 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 426, 461 |
| CviQI | GTAC | 1 cut(s) | 409 |
| DdeI | CTNAG | 7 cut(s) | 52, 77, 307, 758, 801, 1103, 1148 |
| DpnI | GATC | 6 cut(s) | 159, 168, 254, 436, 852, 1014 |
| DpnII | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| DraI | TTTAAA | 1 cut(s) | 454 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 796, 1274 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 796, 1274 |
| EaeI | YGGCCR | 1 cut(s) | 1168 |
| Ecl136II | GAGCTC | 2 cut(s) | 599, 805 |
| Eco130I | CCWWGG | 1 cut(s) | 71 |
| Eco147I | AGGCCT | 2 cut(s) | 747, 1060 |
| Eco24I | GRGCYC | 2 cut(s) | 601, 807 |
| Eco31I | GGTCTC | 2 cut(s) | 1146, 1230 |
| Eco53kI | GAGCTC | 2 cut(s) | 599, 805 |
| Eco57I | CTGAAG | 2 cut(s) | 155, 762 |
| EcoICRI | GAGCTC | 2 cut(s) | 599, 805 |
| EcoRII | CCWGG | 2 cut(s) | 1055, 1112 |
| EcoT14I | CCWWGG | 1 cut(s) | 71 |
| EcoT38I | GRGCYC | 2 cut(s) | 601, 807 |
| ErhI | CCWWGG | 1 cut(s) | 71 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 800, 832, 1141, 1173 |
| FauNDI | CATATG | 1 cut(s) | 541 |
| FbaI | TGATCA | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 3 cut(s) | 497, 840, 1171 |
| FokI | GGATG | 2 cut(s) | 1326, 1330 |
| FriOI | GRGCYC | 2 cut(s) | 601, 807 |
| Fsp4HI | GCNGC | 3 cut(s) | 497, 840, 1171 |
| FspBI | CTAG | 2 cut(s) | 675, 834 |
| GlaI | GCGC | 1 cut(s) | 313 |
| GluI | GCNGC | 3 cut(s) | 497, 840, 1171 |
| GsuI | CTGGAG | 3 cut(s) | 108, 371, 630 |
| HaeIII | GGCC | 6 cut(s) | 126, 605, 747, 1060, 1089, 1170 |
| HapII | CCGG | 2 cut(s) | 406, 518 |
| HhaI | GCGC | 1 cut(s) | 314 |
| Hin6I | GCGC | 1 cut(s) | 312 |
| HinP1I | GCGC | 1 cut(s) | 312 |
| HincII | GTYRAC | 1 cut(s) | 789 |
| HindII | GTYRAC | 1 cut(s) | 789 |
| HindIII | AAGCTT | 1 cut(s) | 138 |
| HinfI | GANTC | 5 cut(s) | 79, 320, 419, 821, 964 |
| HpaII | CCGG | 2 cut(s) | 406, 518 |
| HphI | GGTGA | 2 cut(s) | 973, 1081 |
| Hpy166II | GTNNAC | 3 cut(s) | 290, 789, 857 |
| Hpy188I | TCNGA | 6 cut(s) | 174, 434, 715, 773, 802, 1192 |
| Hpy188III | TCNNGA | 4 cut(s) | 388, 647, 1016, 1265 |
| Hpy8I | GTNNAC | 3 cut(s) | 290, 789, 857 |
| Hpy99I | CGWCG | 2 cut(s) | 590, 799 |
| HpyAV | CCTTC | 3 cut(s) | 29, 737, 1349 |
| HpyCH4III | ACNGT | 4 cut(s) | 786, 877, 1163, 1196 |
| HpyCH4IV | ACGT | 2 cut(s) | 585, 794 |
| HpyCH4V | TGCA | 7 cut(s) | 152, 290, 461, 470, 780, 938, 1038 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 467, 596, 611, 839, 1044 |
| HpyF3I | CTNAG | 7 cut(s) | 52, 77, 307, 758, 801, 1103, 1148 |
| HpySE526I | ACGT | 2 cut(s) | 585, 794 |
| HspAI | GCGC | 1 cut(s) | 312 |
| Ksp22I | TGATCA | 1 cut(s) | 252 |
| Kzo9I | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| LmnI | GCTCC | 4 cut(s) | 281, 596, 619, 899 |
| Lsp1109I | GCAGC | 2 cut(s) | 508, 851 |
| MaeI | CTAG | 2 cut(s) | 675, 834 |
| MaeII | ACGT | 2 cut(s) | 585, 794 |
| MaeIII | GTNAC | 6 cut(s) | 43, 107, 871, 943, 953, 1069 |
| MalI | GATC | 6 cut(s) | 159, 168, 254, 436, 852, 1014 |
| MboI | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| MboII | GAAGA | 3 cut(s) | 161, 329, 1193 |
| MfeI | CAATTG | 2 cut(s) | 195, 324 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MhlI | GDGCHC | 4 cut(s) | 292, 405, 601, 807 |
| MlyI | GAGTC | 2 cut(s) | 88, 815 |
| MmeI | TCCRAC | 1 cut(s) | 107 |
| MnlI | CCTC | 7 cut(s) | 61, 83, 616, 654, 758, 1079, 1288 |
| MseI | TTAA | 1 cut(s) | 453 |
| MslI | CAYNNNNRTG | 2 cut(s) | 270, 974 |
| MspA1I | CMGCKG | 1 cut(s) | 1285 |
| MspI | CCGG | 2 cut(s) | 406, 518 |
| MspR9I | CCNGG | 2 cut(s) | 1057, 1114 |
| MunI | CAATTG | 2 cut(s) | 195, 324 |
| Mva1269I | GAATGC | 1 cut(s) | 555 |
| MvaI | CCWGG | 2 cut(s) | 1057, 1114 |
| MvnI | CGCG | 1 cut(s) | 1173 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 467, 596, 611, 839, 1044 |
| NdeI | CATATG | 1 cut(s) | 541 |
| NdeII | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| NlaIV | GGNNCC | 2 cut(s) | 277, 353 |
| NmuCI | GTSAC | 4 cut(s) | 43, 943, 953, 1069 |
| NspI | RCATGY | 3 cut(s) | 488, 506, 951 |
| PaqCI | CACCTGC | 1 cut(s) | 929 |
| PceI | AGGCCT | 2 cut(s) | 747, 1060 |
| PciI | ACATGT | 2 cut(s) | 484, 947 |
| PctI | GAATGC | 1 cut(s) | 555 |
| PfeI | GAWTC | 3 cut(s) | 320, 419, 964 |
| PflFI | GACNNNGTC | 1 cut(s) | 793 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 267 |
| PinAI | ACCGGT | 1 cut(s) | 405 |
| PkrI | GCNGC | 3 cut(s) | 498, 841, 1172 |
| Ple19I | CGATCG | 1 cut(s) | 853 |
| PleI | GAGTC | 2 cut(s) | 87, 815 |
| PpsI | GAGTC | 2 cut(s) | 87, 815 |
| PscI | ACATGT | 2 cut(s) | 484, 947 |
| Psp124BI | GAGCTC | 2 cut(s) | 601, 807 |
| Psp6I | CCWGG | 2 cut(s) | 1055, 1112 |
| PspGI | CCWGG | 2 cut(s) | 1055, 1112 |
| PspN4I | GGNNCC | 2 cut(s) | 277, 353 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| PsyI | GACNNNGTC | 1 cut(s) | 793 |
| PvuI | CGATCG | 1 cut(s) | 853 |
| RsaI | GTAC | 1 cut(s) | 410 |
| RsaNI | GTAC | 1 cut(s) | 409 |
| RseI | CAYNNNNRTG | 2 cut(s) | 270, 974 |
| SacI | GAGCTC | 2 cut(s) | 601, 807 |
| SaqAI | TTAA | 1 cut(s) | 453 |
| SatI | GCNGC | 3 cut(s) | 497, 840, 1171 |
| Sau3AI | GATC | 6 cut(s) | 157, 166, 252, 434, 850, 1012 |
| SchI | GAGTC | 2 cut(s) | 88, 815 |
| ScrFI | CCNGG | 2 cut(s) | 1057, 1114 |
| SduI | GDGCHC | 4 cut(s) | 292, 405, 601, 807 |
| SfcI | CTRYAG | 2 cut(s) | 876, 909 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 270, 974 |
| SmlI | CTYRAG | 2 cut(s) | 751, 806 |
| SmoI | CTYRAG | 2 cut(s) | 751, 806 |
| SseBI | AGGCCT | 2 cut(s) | 747, 1060 |
| SsiI | CCGC | 3 cut(s) | 885, 1171, 1285 |
| SspI | AATATT | 2 cut(s) | 727, 933 |
| SspMI | CTAG | 2 cut(s) | 675, 834 |
| SstI | GAGCTC | 2 cut(s) | 601, 807 |
| StuI | AGGCCT | 2 cut(s) | 747, 1060 |
| StyD4I | CCNGG | 2 cut(s) | 1055, 1112 |
| StyI | CCWWGG | 1 cut(s) | 71 |
| TaaI | ACNGT | 4 cut(s) | 786, 877, 1163, 1196 |
| TaiI | ACGT | 2 cut(s) | 588, 797 |
| TaqI | TCGA | 2 cut(s) | 824, 1017 |
| TauI | GCSGC | 1 cut(s) | 1173 |
| TfiI | GAWTC | 3 cut(s) | 320, 419, 964 |
| Tru1I | TTAA | 1 cut(s) | 453 |
| Tru9I | TTAA | 1 cut(s) | 453 |
| TscAI | CASTG | 4 cut(s) | 139, 292, 1201, 1235 |
| TseFI | GTSAC | 4 cut(s) | 43, 943, 953, 1069 |
| TseI | GCWGC | 2 cut(s) | 496, 839 |
| Tsp45I | GTSAC | 4 cut(s) | 43, 943, 953, 1069 |
| TspDTI | ATGAA | 5 cut(s) | 132, 549, 894, 992, 1035 |
| TspGWI | ACGGA | 1 cut(s) | 455 |
| TspRI | CASTG | 4 cut(s) | 139, 292, 1201, 1235 |
| Tth111I | GACNNNGTC | 1 cut(s) | 793 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 267 |
| VneI | GTGCAC | 1 cut(s) | 288 |
| XapI | RAATTY | 5 cut(s) | 66, 474, 767, 1007, 1022 |
| XceI | RCATGY | 3 cut(s) | 488, 506, 951 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 590, 1217 |
| XspI | CTAG | 2 cut(s) | 675, 834 |