Rmu_sc0000173.1_g000042

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000173.1
Physical Location & Seq
Reverse (-)
201926 .. 204859
2934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000173.1_g000042.1.cds

Sequence Viewer

Length: 1032 bp
atgaggaatctgcctgcacgtaaggacaacacacccgaaattataagaacacatttgagcaagcaagtacccaaaccaccgcctgggtcccaaatccaaatatgtggagaactcaagcccaaccactgggctctgtcacgggcccagagccagcccagctcccaagcccataaccttatattgggcacccagaaatctgatatgggcacccaatcaaggcaggaccaagcgcctaagcagagaaccagtaccgccgctgctccttgttgcacctccaatggccgcacgccctccatctcctctatcccagatctcgccttccccgacaaacgatccagacgaccattgactcagatcttctccacaccagccaacgatgaagagaaacacgagcaaagggactaccagtgccctcatcgccacattccaacgacaaatggcctcgccactgctagtcgattggaggatccgccgaagaatcaccgccgctctcctctccgctcaaaccctaggggatggcaaaaatcccaagcggggcggagcttcattggatacccgcccctaatggggagagaattcggggacaaatggggaatggggatgaggatccccaatccccgctatctaaaattggggatggggcggggatggtatgatagcttcaatacttttcaacaaagatatttgatcaattccaagcattggggtggctccaatatcagtgcacctatactcgcttacttaggcccagaacaatcaattgatgttgatatacctattattgggttcctacctgaaaacgccattcactttcaagccctccagatatatatagagcaccggtactatggggaatcaatcccattcggctcaacggaagtggcatttaaaaatgcaagcactcttggatacttcaactcagcccaagctatagcagattatgcagaaattctcatacatgtaaagaagcagctacatgccgaacattctccggtcattgttattggtggctcatatggtggaagtgagtga

Protein Analysis

343

Amino Acids

38.31

Weight (kDa)

9.58

Isoelectric Point (pI)

55.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 44
AccB1I GGYRCC 2 cut(s) 185, 206
AccB7I CCANNNNNTGG 3 cut(s) 83, 126, 702
AccBSI CCGCTC 2 cut(s) 489, 501
AclWI GGATC 5 cut(s) 327, 461, 474, 601, 614
AcoI YGGCCR 1 cut(s) 280
AcsI RAATTY 2 cut(s) 575, 948
AfaI GTAC 3 cut(s) 69, 250, 845
AfiI CCNNNNNNNGG 9 cut(s) 83, 126, 181, 216, 534, 566, 567, 702, 782
AflIII ACRYGT 1 cut(s) 958
AgeI ACCGGT 1 cut(s) 840
AgsI TTSAA 4 cut(s) 664, 674, 815, 916
AjnI CCWGG 1 cut(s) 82
AluBI AGCT 5 cut(s) 159, 543, 660, 929, 973
AluI AGCT 5 cut(s) 159, 543, 660, 929, 973
Alw21I GWGCWC 2 cut(s) 727, 840
Alw44I GTGCAC 1 cut(s) 723
AlwI GGATC 5 cut(s) 327, 461, 474, 601, 614
AoxI GGCC 4 cut(s) 141, 280, 439, 745
ApaI GGGCCC 1 cut(s) 145
ApaLI GTGCAC 1 cut(s) 723
ApeKI GCWGC 2 cut(s) 257, 970
ApoI RAATTY 2 cut(s) 575, 948
AsiGI ACCGGT 1 cut(s) 840
AspA2I CCTAGG 1 cut(s) 509
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 5 cut(s) 87, 141, 142, 223, 746
AsuHPI GGTGA 1 cut(s) 473
AvaII GGWCC 2 cut(s) 87, 223
AvrII CCTAGG 1 cut(s) 509
BaeGI GKGCMC 5 cut(s) 145, 188, 209, 413, 727
BamHI GGATCC 2 cut(s) 466, 606
BanI GGYRCC 2 cut(s) 185, 206
BanII GRGCYC 2 cut(s) 133, 145
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BauI CACGAG 1 cut(s) 389
Bbv12I GWGCWC 2 cut(s) 727, 840
BbvI GCAGC 2 cut(s) 244, 982
BccI CCATC 4 cut(s) 302, 510, 631, 642
BciT130I CCWGG 1 cut(s) 84
BciVI GTATCC 2 cut(s) 545, 902
BclI TGATCA 1 cut(s) 687
BfaI CTAG 2 cut(s) 453, 510
BfmI CTRYAG 1 cut(s) 930
BfoI RGCGCY 1 cut(s) 233
BfuI GTATCC 2 cut(s) 545, 902
BglII AGATCT 2 cut(s) 310, 354
BisI GCNGC 5 cut(s) 255, 258, 283, 487, 971
BlnI CCTAGG 1 cut(s) 509
BlsI GCNGC 5 cut(s) 256, 259, 284, 488, 972
Bme1390I CCNGG 1 cut(s) 84
Bme18I GGWCC 2 cut(s) 87, 223
BmgT120I GGNCC 5 cut(s) 87, 141, 142, 223, 746
BmiI GGNNCC 9 cut(s) 88, 89, 143, 187, 208, 468, 608, 712, 788
BmrFI CCNGG 1 cut(s) 84
BmrI ACTGGG 1 cut(s) 136
BmuI ACTGGG 1 cut(s) 136
BpmI CTGGAG 1 cut(s) 806
Bpu10I CCTNAGC 1 cut(s) 234
BpuEI CTTGAG 1 cut(s) 98
BsaAI YACGTR 1 cut(s) 20
BsaBI GATNNNNATC 1 cut(s) 605
BsaJI CCNNGG 2 cut(s) 83, 509
BsaWI WCCGGW 2 cut(s) 840, 991
Bsc4I CCNNNNNNNGG 9 cut(s) 83, 126, 181, 216, 534, 566, 567, 702, 782
Bse118I RCCGGY 1 cut(s) 840
Bse1I ACTGG 3 cut(s) 131, 246, 406
Bse8I GATNNNNATC 1 cut(s) 605
BseBI CCWGG 1 cut(s) 84
BseDI CCNNGG 2 cut(s) 83, 509
BseGI GGATG 4 cut(s) 521, 606, 642, 653
BseJI GATNNNNATC 1 cut(s) 605
BseLI CCNNNNNNNGG 9 cut(s) 83, 126, 181, 216, 534, 566, 567, 702, 782
BseMII CTCAG 2 cut(s) 365, 933
BseNI ACTGG 3 cut(s) 131, 246, 406
BseRI GAGGAG 2 cut(s) 289, 483
BseSI GKGCMC 5 cut(s) 145, 188, 209, 413, 727
BseXI GCAGC 2 cut(s) 244, 982
BseYI CCCAGC 1 cut(s) 155
BshFI GGCC 4 cut(s) 143, 282, 441, 747
BshNI GGYRCC 2 cut(s) 185, 206
BshTI ACCGGT 1 cut(s) 840
BsiHKAI GWGCWC 2 cut(s) 727, 840
BsiSI CCGG 2 cut(s) 841, 992
BslFI GGGAC 3 cut(s) 73, 413, 596
BslI CCNNNNNNNGG 9 cut(s) 83, 126, 181, 216, 534, 566, 567, 702, 782
BsmFI GGGAC 3 cut(s) 73, 413, 596
BsnI GGCC 4 cut(s) 143, 282, 441, 747
Bsp120I GGGCCC 1 cut(s) 141
Bsp1286I GDGCHC 7 cut(s) 133, 145, 188, 209, 413, 727, 840
Bsp143I GATC 6 cut(s) 310, 332, 354, 466, 606, 687
BspANI GGCC 4 cut(s) 143, 282, 441, 747
BspCNI CTCAG 2 cut(s) 364, 932
BspLI GGNNCC 9 cut(s) 88, 89, 143, 187, 208, 468, 608, 712, 788
BspPI GGATC 5 cut(s) 327, 461, 474, 601, 614
BspT107I GGYRCC 2 cut(s) 185, 206
BsrBI CCGCTC 2 cut(s) 489, 501
BsrFI RCCGGY 1 cut(s) 840
BsrI ACTGG 3 cut(s) 131, 246, 406
BssAI RCCGGY 1 cut(s) 840
BssECI CCNNGG 2 cut(s) 83, 509
BssMI GATC 6 cut(s) 310, 332, 354, 466, 606, 687
BssSI CACGAG 1 cut(s) 389
BssT1I CCWWGG 1 cut(s) 509
Bst2BI CACGAG 1 cut(s) 389
Bst2UI CCWGG 1 cut(s) 84
Bst6I CTCTTC 1 cut(s) 375
BstAPI GCANNNNNTGC 1 cut(s) 941
BstBAI YACGTR 1 cut(s) 20
BstC8I GCNNGC 5 cut(s) 15, 62, 152, 287, 898
BstDEI CTNAG 4 cut(s) 234, 351, 742, 919
BstF5I GGATG 4 cut(s) 521, 606, 642, 653
BstH2I RGCGCY 1 cut(s) 233
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 6 cut(s) 313, 335, 357, 469, 609, 690
BstMBI GATC 6 cut(s) 310, 332, 354, 466, 606, 687
BstMWI GCNNNNNNNGC 3 cut(s) 156, 417, 941
BstNI CCWGG 1 cut(s) 84
BstNSI RCATGY 2 cut(s) 962, 980
BstSCI CCNGG 1 cut(s) 82
BstSFI CTRYAG 1 cut(s) 930
BstSLI GKGCMC 5 cut(s) 145, 188, 209, 413, 727
BstV1I GCAGC 2 cut(s) 244, 982
BstX2I RGATCY 4 cut(s) 310, 354, 466, 606
BstXI CCANNNNNNTGG 1 cut(s) 104
BstYI RGATCY 4 cut(s) 310, 354, 466, 606
BsuI GTATCC 2 cut(s) 545, 902
BsuRI GGCC 4 cut(s) 143, 282, 441, 747
BtgZI GCGATG 1 cut(s) 401
BtsCI GGATG 4 cut(s) 521, 606, 642, 653
BtsI GCAGTG 1 cut(s) 447
BtsIMutI CAGTG 4 cut(s) 124, 413, 447, 727
Cac8I GCNNGC 5 cut(s) 15, 62, 152, 287, 898
CfoI GCGC 1 cut(s) 232
Cfr10I RCCGGY 1 cut(s) 840
Cfr13I GGNCC 5 cut(s) 87, 141, 142, 223, 746
Csp6I GTAC 3 cut(s) 68, 249, 844
CspAI ACCGGT 1 cut(s) 840
CspCI CAANNNNNGTGG 2 cut(s) 861, 896
CviAII CATG 2 cut(s) 959, 977
CviQI GTAC 3 cut(s) 68, 249, 844
DdeI CTNAG 4 cut(s) 234, 351, 742, 919
DpnI GATC 6 cut(s) 312, 334, 356, 468, 608, 689
DpnII GATC 6 cut(s) 310, 332, 354, 466, 606, 687
DraI TTTAAA 1 cut(s) 889
EaeI YGGCCR 1 cut(s) 280
Eam1104I CTCTTC 1 cut(s) 375
EarI CTCTTC 1 cut(s) 375
EciI GGCGGA 2 cut(s) 459, 553
Eco130I CCWWGG 1 cut(s) 509
Eco24I GRGCYC 2 cut(s) 133, 145
Eco47I GGWCC 2 cut(s) 87, 223
EcoO109I RGGNCCY 1 cut(s) 87
EcoRI GAATTC 1 cut(s) 575
EcoRII CCWGG 1 cut(s) 82
EcoT14I CCWWGG 1 cut(s) 509
EcoT38I GRGCYC 2 cut(s) 133, 145
ErhI CCWWGG 1 cut(s) 509
FaeI CATG 2 cut(s) 962, 980
FaqI GGGAC 3 cut(s) 73, 413, 596
FatI CATG 2 cut(s) 958, 976
FauI CCCGC 4 cut(s) 526, 564, 626, 636
FauNDI CATATG 1 cut(s) 1015
FbaI TGATCA 1 cut(s) 687
Fnu4HI GCNGC 5 cut(s) 255, 258, 283, 487, 971
FokI GGATG 4 cut(s) 528, 613, 649, 660
FriOI GRGCYC 2 cut(s) 133, 145
Fsp4HI GCNGC 5 cut(s) 255, 258, 283, 487, 971
FspBI CTAG 2 cut(s) 453, 510
GlaI GCGC 1 cut(s) 231
GluI GCNGC 5 cut(s) 255, 258, 283, 487, 971
GsaI CCCAGC 1 cut(s) 159
GsuI CTGGAG 1 cut(s) 806
HaeII RGCGCY 1 cut(s) 233
HaeIII GGCC 4 cut(s) 143, 282, 441, 747
HapII CCGG 2 cut(s) 841, 992
HhaI GCGC 1 cut(s) 232
Hin1II CATG 2 cut(s) 962, 980
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HinfI GANTC 4 cut(s) 7, 349, 478, 854
HpaII CCGG 2 cut(s) 841, 992
HphI GGTGA 1 cut(s) 473
Hpy166II GTNNAC 1 cut(s) 725
Hpy188I TCNGA 2 cut(s) 199, 354
Hpy188III TCNNGA 2 cut(s) 336, 823
Hpy8I GTNNAC 1 cut(s) 725
HpyAV CCTTC 1 cut(s) 328
HpyCH4IV ACGT 1 cut(s) 19
HpyCH4V TGCA 5 cut(s) 17, 270, 725, 896, 944
HpyF10VI GCNNNNNNNGC 3 cut(s) 156, 417, 941
HpyF3I CTNAG 4 cut(s) 234, 351, 742, 919
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 2 cut(s) 962, 980
HspAI GCGC 1 cut(s) 230
KflI GGGWCCC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 687
Kzo9I GATC 6 cut(s) 310, 332, 354, 466, 606, 687
LmnI GCTCC 4 cut(s) 164, 265, 540, 716
Lsp1109I GCAGC 2 cut(s) 244, 982
MaeI CTAG 2 cut(s) 453, 510
MaeII ACGT 1 cut(s) 19
MaeIII GTNAC 1 cut(s) 135
MalI GATC 6 cut(s) 312, 334, 356, 468, 608, 689
MbiI CCGCTC 2 cut(s) 489, 501
MboI GATC 6 cut(s) 310, 332, 354, 466, 606, 687
MboII GAAGA 3 cut(s) 349, 392, 487
MfeI CAATTG 1 cut(s) 759
MflI RGATCY 4 cut(s) 310, 354, 466, 606
MhlI GDGCHC 7 cut(s) 133, 145, 188, 209, 413, 727, 840
MluCI AATT 6 cut(s) 39, 575, 629, 691, 759, 948
MlyI GAGTC 1 cut(s) 343
MmeI TCCRAC 1 cut(s) 452
MnlI CCTC 9 cut(s) 283, 301, 310, 423, 452, 457, 504, 597, 830
MseI TTAA 1 cut(s) 888
MslI CAYNNNNRTG 1 cut(s) 705
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 2 cut(s) 841, 992
MspR9I CCNGG 1 cut(s) 84
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 156, 417, 941
NdeI CATATG 1 cut(s) 1015
NdeII GATC 6 cut(s) 310, 332, 354, 466, 606, 687
NlaIII CATG 2 cut(s) 962, 980
NlaIV GGNNCC 9 cut(s) 88, 89, 143, 187, 208, 468, 608, 712, 788
NmuCI GTSAC 1 cut(s) 135
NspI RCATGY 2 cut(s) 962, 980
PciI ACATGT 1 cut(s) 958
PcsI WCGNNNNNNNCGW 2 cut(s) 321, 337
PfeI GAWTC 3 cut(s) 7, 478, 854
PflMI CCANNNNNTGG 3 cut(s) 83, 126, 702
PinAI ACCGGT 1 cut(s) 840
PkrI GCNGC 5 cut(s) 256, 259, 284, 488, 972
PleI GAGTC 1 cut(s) 343
PpsI GAGTC 1 cut(s) 343
Ppu21I YACGTR 1 cut(s) 20
PpuMI RGGWCCY 1 cut(s) 87
PscI ACATGT 1 cut(s) 958
PsiI TTATAA 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 87
Psp6I CCWGG 1 cut(s) 82
PspFI CCCAGC 1 cut(s) 155
PspGI CCWGG 1 cut(s) 82
PspN4I GGNNCC 9 cut(s) 88, 89, 143, 187, 208, 468, 608, 712, 788
PspOMI GGGCCC 1 cut(s) 141
PspPI GGNCC 5 cut(s) 87, 141, 142, 223, 746
PspPPI RGGWCCY 1 cut(s) 87
PsuI RGATCY 4 cut(s) 310, 354, 466, 606
RsaI GTAC 3 cut(s) 69, 250, 845
RsaNI GTAC 3 cut(s) 68, 249, 844
RseI CAYNNNNRTG 1 cut(s) 705
SaqAI TTAA 1 cut(s) 888
SatI GCNGC 5 cut(s) 255, 258, 283, 487, 971
Sau3AI GATC 6 cut(s) 310, 332, 354, 466, 606, 687
Sau96I GGNCC 5 cut(s) 87, 141, 142, 223, 746
SchI GAGTC 1 cut(s) 343
ScrFI CCNGG 1 cut(s) 84
SduI GDGCHC 7 cut(s) 133, 145, 188, 209, 413, 727, 840
SfcI CTRYAG 1 cut(s) 930
SinI GGWCC 2 cut(s) 87, 223
SmiMI CAYNNNNRTG 1 cut(s) 705
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 6 cut(s) 39, 575, 629, 691, 759, 948
SspMI CTAG 2 cut(s) 453, 510
StyD4I CCNGG 1 cut(s) 82
StyI CCWWGG 1 cut(s) 509
TaiI ACGT 1 cut(s) 22
TaqI TCGA 1 cut(s) 457
TasI AATT 6 cut(s) 39, 575, 629, 691, 759, 948
TauI GCSGC 3 cut(s) 257, 285, 489
TfiI GAWTC 3 cut(s) 7, 478, 854
Tru1I TTAA 1 cut(s) 888
Tru9I TTAA 1 cut(s) 888
TscAI CASTG 4 cut(s) 131, 413, 454, 727
TseFI GTSAC 1 cut(s) 135
TseI GCWGC 2 cut(s) 257, 970
Tsp45I GTSAC 1 cut(s) 135
TspDTI ATGAA 2 cut(s) 393, 535
TspGWI ACGGA 1 cut(s) 890
TspRI CASTG 4 cut(s) 131, 413, 454, 727
Van91I CCANNNNNTGG 3 cut(s) 83, 126, 702
VneI GTGCAC 1 cut(s) 723
VpaK11BI GGWCC 2 cut(s) 87, 223
XapI RAATTY 2 cut(s) 575, 948
XceI RCATGY 2 cut(s) 962, 980
XmaJI CCTAGG 1 cut(s) 509
XspI CTAG 2 cut(s) 453, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.