RLG00000035071

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
60270495 .. 60273608
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035071

Sequence Viewer

Length: 1521 bp
ATGGAAATGAAGCAACTCACATTCTCACTCCAATCATCCCTTCTACTAATATCTCTTATATTTGTCACAACCTCAGTTTCCTTAAAAATTCCAAGGCGGAGTCCAACTGGAGGGCAATTTATACATGGTAACTATTGGACACAAAGCCGACCCAGCGAAGCTTCATCACCTGCATTTGATCCCAAAGATTTGCAGACATTTTATTACAACCAAACACTTGACCATTTCAACTTTAGGTATGATAGCTTCAATACTTTTCAACAAAGATATTTGATTAATTCCAAGCATTGGGGTGGCTCCAATATCAGTGCACCAATACTCGCTTACTTAGGCGCAGAAGAATCAATTGATGTTGATATACCTATTATTGGGTTCCTACCTGAAAACGCCATTCACTTTCAAGCCCTCCAGATATATATAGAGCATCGGTACTATGGGAAATCAATCCCATTCGGATCCAAGGAAGTGGCATTTAAAAATGCAAGCACTCTTGGATACTTCAACTCAGCCCAAGCTATAGCAGATTATGCAGAAATTCTCATACATGTAAAGAAGCAACTACATGCTGAACATTCTCCGGTCATTGTTATTGGTGGCTCATATGGTGGAATGCTTGCTTCATGGTTTCGCCTAAAGTATCCCCACGTCGCTCTTGGAGCTCTGGCCTCATCAGCTCCAATTCTATACTTCGATGACATTGTTCCTCCAGAAACAGGATACTACTCCATTGTCACCAAGGATTTTCGAGAAGCGAGTGAGACTTGCTACCAAATCATAAAAAAGTCTTGGTCTGAAATTGATAATGCTTCTAATCCTGAAGGCCTCTCAAGTCTTAGCAAGAAATTCCAAACTTGCAGACCATTGACCAAGTCTTCTGAGCTCAAGGACTACTTGAAGTCGATGTATGCTAGGGCAGCTCAATACGATCGTCCACCGAATTATCCGGTTACTGTAGTCTGTGGTGGCATTGATGGAGCTTCATCTACAGATGATATTTTGACAAAAATATTTGCAGGTGTGGTTGCATATACCGGAAACCAGTCATGCTACGTCAACCAGCCCAAAAGCCTAACAGAAACAAACGACGGGTGGGGATGGCAGACATGTAGTGACATGGTATTTCCCATAAGCGTGAACAACGACACCATGTTTCAACCGTACAAATTTGATGTTGATGAATATATCAATAAATGCAAGGCAACCTATGGCGTCCCTCCCAGGCCTAATTGGGTGACTACCTACTTTGGAGGCCATGACATAAAATTGAGTCTCTCCAGATTTGCTAGCAACATCATTTTCTCCAATGGGCTAAGAGACCCTTACAGTATTGGCAGCGTTTTGGAAGACATATCAGACAGTGTGGTAGCTGTCCATGCAAAGAATGGGTCTCACTGCTTGGATATTCTCACCTCAAACCAGACTACCGATCCAGACTGGCTGGTCAATCAGCGAAAAAGTGAGGTCGGAATCATCAAAGGATGGATAGCTAAATACTATGCTGACCTTCAAGCTCTCCAATAA

Protein Analysis

507

Amino Acids

56.64

Weight (kDa)

6.19

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 71 - 485 1e-70 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 178, 1004
AasI GACNNNNNNGTC 1 cut(s) 1439
Acc36I ACCTGC 2 cut(s) 178, 1004
AccB7I CCANNNNNTGG 1 cut(s) 288
AciI CCGC 1 cut(s) 97
AclWI GGATC 4 cut(s) 173, 450, 463, 1421
AcsI RAATTY 4 cut(s) 87, 534, 842, 1163
AcuI CTGAAG 1 cut(s) 837
AcyI GRCGYC 1 cut(s) 1209
AfaI GTAC 2 cut(s) 431, 1160
AfiI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
AflIII ACRYGT 2 cut(s) 544, 1103
AgsI TTSAA 8 cut(s) 229, 250, 260, 401, 502, 895, 1154, 1508
AjiI CACGTC 1 cut(s) 646
AjnI CCWGG 1 cut(s) 1217
AjuI GAANNNNNNNTTGG 2 cut(s) 24, 56
Alw21I GWGCWC 3 cut(s) 313, 661, 882
Alw26I GTCTC 4 cut(s) 752, 1274, 1308, 1392
Alw44I GTGCAC 1 cut(s) 309
AlwI GGATC 4 cut(s) 173, 450, 463, 1421
AoxI GGCC 4 cut(s) 663, 820, 1220, 1249
ApaLI GTGCAC 1 cut(s) 309
ApeKI GCWGC 2 cut(s) 914, 1332
ApoI RAATTY 4 cut(s) 87, 534, 842, 1163
ArsI GACNNNNNNTTYG 2 cut(s) 1370, 1402
AseI ATTAAT 1 cut(s) 276
AspLEI GCGC 1 cut(s) 335
AsuHPI GGTGA 4 cut(s) 159, 724, 1243, 1399
AsuNHI GCTAGC 1 cut(s) 1283
BaeGI GKGCMC 1 cut(s) 313
BamHI GGATCC 1 cut(s) 455
BanII GRGCYC 2 cut(s) 661, 882
BarI GAAGNNNNNNTAC 2 cut(s) 230, 262
BbsI GAAGAC 2 cut(s) 864, 1350
Bbv12I GWGCWC 3 cut(s) 313, 661, 882
BbvI GCAGC 2 cut(s) 926, 1344
BccI CCATC 3 cut(s) 965, 1089, 1473
BciT130I CCWGG 1 cut(s) 1219
BciVI GTATCC 3 cut(s) 488, 648, 710
BcoDI GTCTC 4 cut(s) 752, 1274, 1308, 1392
BfaI CTAG 2 cut(s) 909, 1284
BfmI CTRYAG 3 cut(s) 516, 951, 984
BfuAI ACCTGC 2 cut(s) 178, 1004
BfuI GTATCC 3 cut(s) 488, 648, 710
BisI GCNGC 2 cut(s) 915, 1333
BlsI GCNGC 2 cut(s) 916, 1334
Bme1390I CCNGG 1 cut(s) 1219
BmgBI CACGTC 1 cut(s) 646
BmiI GGNNCC 3 cut(s) 298, 374, 457
BmrFI CCNGG 1 cut(s) 1219
BmsI GCATC 1 cut(s) 433
BmtI GCTAGC 1 cut(s) 1287
BpiI GAAGAC 2 cut(s) 864, 1350
BpmI CTGGAG 4 cut(s) 129, 392, 690, 1258
BpuEI CTTGAG 2 cut(s) 811, 866
BsaHI GRCGYC 1 cut(s) 1209
BsaI GGTCTC 2 cut(s) 1308, 1392
BsaJI CCNNGG 4 cut(s) 92, 459, 735, 1217
BsaWI WCCGGW 3 cut(s) 577, 943, 1031
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
Bse1I ACTGG 3 cut(s) 112, 1039, 1439
BseBI CCWGG 1 cut(s) 1219
BseDI CCNNGG 4 cut(s) 92, 459, 735, 1217
BseGI GGATG 3 cut(s) 35, 1100, 1484
BseLI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
BseMII CTCAG 3 cut(s) 87, 519, 867
BseNI ACTGG 3 cut(s) 112, 1039, 1439
BseSI GKGCMC 1 cut(s) 313
BseXI GCAGC 2 cut(s) 926, 1344
BseYI CCCAGC 1 cut(s) 152
Bsh1285I CGRYCG 1 cut(s) 928
BshFI GGCC 4 cut(s) 665, 822, 1222, 1251
BsiEI CGRYCG 1 cut(s) 928
BsiHKAI GWGCWC 3 cut(s) 313, 661, 882
BsiSI CCGG 3 cut(s) 578, 944, 1032
BslFI GGGAC 1 cut(s) 1196
BslI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
BsmAI GTCTC 4 cut(s) 752, 1274, 1308, 1392
BsmFI GGGAC 1 cut(s) 1196
BsmI GAATGC 1 cut(s) 615
BsnI GGCC 4 cut(s) 665, 822, 1222, 1251
Bso31I GGTCTC 2 cut(s) 1308, 1392
Bsp1286I GDGCHC 3 cut(s) 313, 661, 882
Bsp143I GATC 4 cut(s) 178, 455, 925, 1426
BspACI CCGC 1 cut(s) 97
BspANI GGCC 4 cut(s) 665, 822, 1222, 1251
BspCNI CTCAG 3 cut(s) 86, 518, 868
BspLI GGNNCC 3 cut(s) 298, 374, 457
BspMI ACCTGC 2 cut(s) 178, 1004
BspOI GCTAGC 1 cut(s) 1287
BspPI GGATC 4 cut(s) 173, 450, 463, 1421
BspTNI GGTCTC 2 cut(s) 1308, 1392
BsrI ACTGG 3 cut(s) 112, 1039, 1439
BssECI CCNNGG 4 cut(s) 92, 459, 735, 1217
BssMI GATC 4 cut(s) 178, 455, 925, 1426
BssNI GRCGYC 1 cut(s) 1209
BssT1I CCWWGG 3 cut(s) 92, 459, 735
Bst2UI CCWGG 1 cut(s) 1219
Bst4CI ACNGT 4 cut(s) 952, 1158, 1325, 1358
BstACI GRCGYC 1 cut(s) 1209
BstAPI GCANNNNNTGC 1 cut(s) 527
BstC8I GCNNGC 3 cut(s) 484, 615, 1285
BstDEI CTNAG 6 cut(s) 73, 328, 505, 833, 876, 1310
BstF5I GGATG 3 cut(s) 35, 1100, 1484
BstHHI GCGC 1 cut(s) 335
BstKTI GATC 4 cut(s) 181, 458, 928, 1429
BstMAI GTCTC 4 cut(s) 752, 1274, 1308, 1392
BstMBI GATC 4 cut(s) 178, 455, 925, 1426
BstMCI CGRYCG 1 cut(s) 928
BstMWI GCNNNNNNNGC 6 cut(s) 153, 527, 656, 671, 914, 1373
BstNI CCWGG 1 cut(s) 1219
BstNSI RCATGY 3 cut(s) 548, 566, 1107
BstSCI CCNGG 1 cut(s) 1217
BstSFI CTRYAG 3 cut(s) 516, 951, 984
BstSLI GKGCMC 1 cut(s) 313
BstV1I GCAGC 2 cut(s) 926, 1344
BstV2I GAAGAC 2 cut(s) 864, 1350
BstX2I RGATCY 1 cut(s) 455
BstXI CCANNNNNNTGG 1 cut(s) 466
BstYI RGATCY 1 cut(s) 455
BsuI GTATCC 3 cut(s) 488, 648, 710
BsuRI GGCC 4 cut(s) 665, 822, 1222, 1251
BtrI CACGTC 1 cut(s) 646
BtsCI GGATG 3 cut(s) 35, 1100, 1484
BtsI GCAGTG 1 cut(s) 1390
BtsIMutI CAGTG 3 cut(s) 313, 1363, 1390
BveI ACCTGC 2 cut(s) 178, 1004
Cac8I GCNNGC 3 cut(s) 484, 615, 1285
CfoI GCGC 1 cut(s) 335
CseI GACGC 1 cut(s) 1198
Csp6I GTAC 2 cut(s) 430, 1159
CviQI GTAC 2 cut(s) 430, 1159
DdeI CTNAG 6 cut(s) 73, 328, 505, 833, 876, 1310
DpnI GATC 4 cut(s) 180, 457, 927, 1428
DpnII GATC 4 cut(s) 178, 455, 925, 1426
DraI TTTAAA 1 cut(s) 475
DrdI GACNNNNNNGTC 1 cut(s) 1439
DseDI GACNNNNNNGTC 1 cut(s) 1439
EciI GGCGGA 1 cut(s) 112
Ecl136II GAGCTC 2 cut(s) 659, 880
Eco130I CCWWGG 3 cut(s) 92, 459, 735
Eco147I AGGCCT 2 cut(s) 822, 1222
Eco24I GRGCYC 2 cut(s) 661, 882
Eco31I GGTCTC 2 cut(s) 1308, 1392
Eco53kI GAGCTC 2 cut(s) 659, 880
Eco57I CTGAAG 1 cut(s) 837
EcoICRI GAGCTC 2 cut(s) 659, 880
EcoRII CCWGG 1 cut(s) 1217
EcoT14I CCWWGG 3 cut(s) 92, 459, 735
EcoT38I GRGCYC 2 cut(s) 661, 882
ErhI CCWWGG 3 cut(s) 92, 459, 735
FalI AAGNNNNNCTT 4 cut(s) 875, 907, 1303, 1335
FaqI GGGAC 1 cut(s) 1196
FauNDI CATATG 1 cut(s) 601
Fnu4HI GCNGC 2 cut(s) 915, 1333
FokI GGATG 3 cut(s) 22, 1107, 1491
FriOI GRGCYC 2 cut(s) 661, 882
Fsp4HI GCNGC 2 cut(s) 915, 1333
FspBI CTAG 2 cut(s) 909, 1284
GlaI GCGC 1 cut(s) 334
GluI GCNGC 2 cut(s) 915, 1333
GsaI CCCAGC 1 cut(s) 156
GsuI CTGGAG 4 cut(s) 129, 392, 690, 1258
HaeIII GGCC 4 cut(s) 665, 822, 1222, 1251
HapII CCGG 3 cut(s) 578, 944, 1032
HgaI GACGC 1 cut(s) 1198
HhaI GCGC 1 cut(s) 335
Hin1I GRCGYC 1 cut(s) 1209
Hin6I GCGC 1 cut(s) 333
HinP1I GCGC 1 cut(s) 333
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HindIII AAGCTT 1 cut(s) 159
HinfI GANTC 4 cut(s) 100, 341, 1267, 1467
HpaII CCGG 3 cut(s) 578, 944, 1032
HphI GGTGA 4 cut(s) 159, 724, 1243, 1399
Hpy166II GTNNAC 4 cut(s) 311, 932, 1054, 1135
Hpy188I TCNGA 5 cut(s) 455, 793, 877, 1354, 1466
Hpy188III TCNNGA 6 cut(s) 409, 707, 746, 815, 1275, 1430
Hpy8I GTNNAC 4 cut(s) 311, 932, 1054, 1135
Hpy99I CGWCG 2 cut(s) 650, 1088
HpyAV CCTTC 3 cut(s) 50, 812, 1514
HpyCH4III ACNGT 4 cut(s) 952, 1158, 1325, 1358
HpyCH4IV ACGT 2 cut(s) 645, 1050
HpyF10VI GCNNNNNNNGC 6 cut(s) 153, 527, 656, 671, 914, 1373
HpyF3I CTNAG 6 cut(s) 73, 328, 505, 833, 876, 1310
HpySE526I ACGT 2 cut(s) 645, 1050
Hsp92I GRCGYC 1 cut(s) 1209
HspAI GCGC 1 cut(s) 333
Kzo9I GATC 4 cut(s) 178, 455, 925, 1426
LmnI GCTCC 4 cut(s) 302, 656, 679, 974
Lsp1109I GCAGC 2 cut(s) 926, 1344
LweI GCATC 1 cut(s) 433
MaeI CTAG 2 cut(s) 909, 1284
MaeII ACGT 2 cut(s) 645, 1050
MaeIII GTNAC 6 cut(s) 64, 128, 730, 946, 1109, 1231
MalI GATC 4 cut(s) 180, 457, 927, 1428
MboI GATC 4 cut(s) 178, 455, 925, 1426
MboII GAAGA 3 cut(s) 350, 864, 1355
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 1 cut(s) 455
MhlI GDGCHC 3 cut(s) 313, 661, 882
MlyI GAGTC 2 cut(s) 109, 1276
MmeI TCCRAC 2 cut(s) 128, 1444
MseI TTAA 3 cut(s) 83, 276, 474
MslI CAYNNNNRTG 2 cut(s) 291, 1130
MspI CCGG 3 cut(s) 578, 944, 1032
MspR9I CCNGG 1 cut(s) 1219
MunI CAATTG 1 cut(s) 345
Mva1269I GAATGC 1 cut(s) 615
MvaI CCWGG 1 cut(s) 1219
MwoI GCNNNNNNNGC 6 cut(s) 153, 527, 656, 671, 914, 1373
NdeI CATATG 1 cut(s) 601
NdeII GATC 4 cut(s) 178, 455, 925, 1426
NheI GCTAGC 1 cut(s) 1283
NlaIV GGNNCC 3 cut(s) 298, 374, 457
NmuCI GTSAC 4 cut(s) 64, 730, 1109, 1231
NspI RCATGY 3 cut(s) 548, 566, 1107
PaqCI CACCTGC 2 cut(s) 178, 1004
PceI AGGCCT 2 cut(s) 822, 1222
PciI ACATGT 2 cut(s) 544, 1103
PctI GAATGC 1 cut(s) 615
PfeI GAWTC 2 cut(s) 341, 1467
PflFI GACNNNGTC 1 cut(s) 868
PflMI CCANNNNNTGG 1 cut(s) 288
PkrI GCNGC 2 cut(s) 916, 1334
Ple19I CGATCG 1 cut(s) 928
PleI GAGTC 2 cut(s) 108, 1275
PpsI GAGTC 2 cut(s) 108, 1275
PscI ACATGT 2 cut(s) 544, 1103
PshBI ATTAAT 1 cut(s) 276
Psp124BI GAGCTC 2 cut(s) 661, 882
Psp6I CCWGG 1 cut(s) 1217
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 1 cut(s) 1217
PspN4I GGNNCC 3 cut(s) 298, 374, 457
PsuI RGATCY 1 cut(s) 455
PsyI GACNNNGTC 1 cut(s) 868
PvuI CGATCG 1 cut(s) 928
RsaI GTAC 2 cut(s) 431, 1160
RsaNI GTAC 2 cut(s) 430, 1159
RseI CAYNNNNRTG 2 cut(s) 291, 1130
SacI GAGCTC 2 cut(s) 661, 882
SaqAI TTAA 3 cut(s) 83, 276, 474
SatI GCNGC 2 cut(s) 915, 1333
Sau3AI GATC 4 cut(s) 178, 455, 925, 1426
SchI GAGTC 2 cut(s) 109, 1276
ScrFI CCNGG 1 cut(s) 1219
SduI GDGCHC 3 cut(s) 313, 661, 882
SfaNI GCATC 1 cut(s) 433
SfcI CTRYAG 3 cut(s) 516, 951, 984
SmiMI CAYNNNNRTG 2 cut(s) 291, 1130
SmlI CTYRAG 2 cut(s) 826, 881
SmoI CTYRAG 2 cut(s) 826, 881
SseBI AGGCCT 2 cut(s) 822, 1222
SsiI CCGC 1 cut(s) 97
SspI AATATT 1 cut(s) 1008
SspMI CTAG 2 cut(s) 909, 1284
SstI GAGCTC 2 cut(s) 661, 882
StuI AGGCCT 2 cut(s) 822, 1222
StyD4I CCNGG 1 cut(s) 1217
StyI CCWWGG 3 cut(s) 92, 459, 735
TaaI ACNGT 4 cut(s) 952, 1158, 1325, 1358
TaiI ACGT 2 cut(s) 648, 1053
TaqI TCGA 3 cut(s) 690, 745, 899
TfiI GAWTC 2 cut(s) 341, 1467
Tru1I TTAA 3 cut(s) 83, 276, 474
Tru9I TTAA 3 cut(s) 83, 276, 474
TscAI CASTG 3 cut(s) 313, 1363, 1397
TseFI GTSAC 4 cut(s) 64, 730, 1109, 1231
TseI GCWGC 2 cut(s) 914, 1332
Tsp45I GTSAC 4 cut(s) 64, 730, 1109, 1231
TspDTI ATGAA 5 cut(s) 23, 153, 609, 969, 1191
TspRI CASTG 3 cut(s) 313, 1363, 1397
Tth111I GACNNNGTC 1 cut(s) 868
Van91I CCANNNNNTGG 1 cut(s) 288
VneI GTGCAC 1 cut(s) 309
VspI ATTAAT 1 cut(s) 276
XapI RAATTY 4 cut(s) 87, 534, 842, 1163
XceI RCATGY 3 cut(s) 548, 566, 1107
XcmI CCANNNNNNNNNTGG 2 cut(s) 650, 1379
XspI CTAG 2 cut(s) 909, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.