RLG00000035068

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
60233232 .. 60236721
3490 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035068

Sequence Viewer

Length: 1428 bp
ATGGCATTCGAAACACAACTGCTGCCCTCCAAGGATTTGCCATACCATGGAAATGAAGCAACTCACATTCTCATTCCAATCATCCTATCTACTAATATCTCTTATATTTGTCACAACCTCAGTATCCTTAAAAATTCCAAGGCTGAGTCCAACCGGAGGGCAATTTATACATGGTATGATAGCTTCAATACTTTTCAACAAAGATATTTGATCAATTCCAAGCATTGGGGTGGCTCCAATATCAGTGCACCAATACTCGCTTACTTAGGCGCAGAAGAATCAATTGATGTTGATATACCTATTATTGGGTTCCTACCTGATAACGCCATTCACTTTCAAGCCCTCCAGATATATATAGAGCACCGGTACTATGGGGAATCAATCCCATTCGGATCCAGGGAAGTGGCATTTAAAAATGCAAGCACTCTTGGATACTTCAACTCAGCCCAAGCTATAGCAGATTATGCAGAAATTCTCATACATGTAAAGAAGCAACTACATGCCGAACATTCTCCGGTCATTGTTATTGGTGGCTCATATGGTGGAATGCTTGCTTCATGGTTTCGCCTAAAGTATCCCCACGTCGCTCTTGGAGCTCTGGCCTCATCAGCTCCAATTCTATACTTTGATGACATAGTTCATCCAGAAACGGGGTACTACTCCATTGCCACCAAGGATTTTCGAGAAGTGAGTGAGACTTGCTACCAAATCATAAACAAGTCTTGGTCTGAAATTGATAATATTGCTTCTAAGCCTGAAGGCCTCTCAAGTCTTAGCAAGAAATTCCGAACTTGCAGACCGTTGACCAATTCGTCTGAGCTCAAGGACTACTTGGACTCGATGTATAGTAGGGCAGCTCAATACGATCGTCTACCAAATTATCCGGTTACTGTAGTCTGCGGTGGCATTGATGGAGAGATGACAGATGATATTTTATTTGTAGGTGTGGTTGCATATACCGGAAACCGGTCATGCTATATCAACCCGCCCAAAAACTTAATAGAAACAGACGAAGGCGACTTGGTGATTCCTATAAGCGTTAACAACGACACCATGTTTCCACCGTACAAATTTGATGTCGATGAATATATCAATAAGTGCAAGAAAACCTATGGCGTCCCTCCCAGGCCTAATTGGGTGACTACCTACTTTAGAGGCCATGACATAAAACTGAGTCTCTCCAGATTTGCTAGCAACATCATTTTCTCCAATGGGCTAAGAGACCCTTACAGTATTGGCGGCATTTTGGAAGACATATCAGACAGTGTGGTAGCTGTCCATGCAAAGAATGGGTCTCACTGCTCGGATATTCTCACCTCAAATCAGACTACTGATCCAGACTGGCTGGTCAATCAGCGGAAAAGTGAGGTCGGAATCATCAAAGGATGGATAGCTAAATACTATGCTGACCTTCAAGCTCTCCAATAA

Protein Analysis

476

Amino Acids

53.32

Weight (kDa)

5.78

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 63 - 288 9.3e-48 Serine carboxypeptidase S28
Peptidase_S28 PF05577 343 - 454 2.4e-09 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 811, 1346
AccB7I CCANNNNNTGG 2 cut(s) 47, 225
AccI GTMKAC 1 cut(s) 871
AciI CCGC 4 cut(s) 900, 986, 1239, 1357
AclWI GGATC 3 cut(s) 387, 400, 1328
AcsI RAATTY 4 cut(s) 133, 471, 782, 1070
AcuI CTGAAG 1 cut(s) 777
AcyI GRCGYC 1 cut(s) 1116
AfaI GTAC 3 cut(s) 368, 656, 1067
AfiI CCNNNNNNNGG 6 cut(s) 47, 156, 225, 305, 650, 966
AflIII ACRYGT 1 cut(s) 481
AgeI ACCGGT 2 cut(s) 363, 966
AgsI TTSAA 5 cut(s) 187, 197, 338, 439, 1415
AjiI CACGTC 1 cut(s) 583
AjnI CCWGG 2 cut(s) 395, 1124
AluBI AGCT 9 cut(s) 183, 452, 596, 611, 820, 857, 1274, 1394, 1418
AluI AGCT 9 cut(s) 183, 452, 596, 611, 820, 857, 1274, 1394, 1418
Alw21I GWGCWC 4 cut(s) 250, 363, 598, 822
Alw26I GTCTC 4 cut(s) 689, 1181, 1215, 1299
Alw44I GTGCAC 1 cut(s) 246
AlwI GGATC 3 cut(s) 387, 400, 1328
AoxI GGCC 4 cut(s) 600, 760, 1127, 1156
ApaLI GTGCAC 1 cut(s) 246
ApeKI GCWGC 2 cut(s) 22, 854
ApoI RAATTY 4 cut(s) 133, 471, 782, 1070
ArsI GACNNNNNNTTYG 4 cut(s) 1062, 1094, 1277, 1309
AsiGI ACCGGT 2 cut(s) 363, 966
AspLEI GCGC 1 cut(s) 272
AsuHPI GGTGA 3 cut(s) 1036, 1150, 1306
AsuII TTCGAA 1 cut(s) 9
AsuNHI GCTAGC 1 cut(s) 1190
BaeGI GKGCMC 1 cut(s) 250
BaeI ACNNNNGTAYC 2 cut(s) 106, 139
BamHI GGATCC 1 cut(s) 392
BanII GRGCYC 2 cut(s) 598, 822
BarI GAAGNNNNNNTAC 2 cut(s) 167, 199
BbsI GAAGAC 1 cut(s) 1257
Bbv12I GWGCWC 4 cut(s) 250, 363, 598, 822
BbvI GCAGC 2 cut(s) 9, 866
BccI CCATC 2 cut(s) 905, 1380
BciT130I CCWGG 2 cut(s) 397, 1126
BciVI GTATCC 3 cut(s) 134, 425, 585
BclI TGATCA 1 cut(s) 210
BcoDI GTCTC 4 cut(s) 689, 1181, 1215, 1299
BfaI CTAG 1 cut(s) 1191
BfmI CTRYAG 2 cut(s) 453, 891
BfuI GTATCC 3 cut(s) 134, 425, 585
BisI GCNGC 3 cut(s) 23, 855, 1240
BlsI GCNGC 3 cut(s) 24, 856, 1241
Bme1390I CCNGG 2 cut(s) 397, 1126
BmgBI CACGTC 1 cut(s) 583
BmiI GGNNCC 3 cut(s) 235, 311, 394
BmrFI CCNGG 2 cut(s) 397, 1126
BmtI GCTAGC 1 cut(s) 1194
BpiI GAAGAC 1 cut(s) 1257
BpmI CTGGAG 2 cut(s) 329, 1165
Bpu14I TTCGAA 1 cut(s) 9
BpuEI CTTGAG 2 cut(s) 751, 806
BsaHI GRCGYC 1 cut(s) 1116
BsaI GGTCTC 2 cut(s) 1215, 1299
BsaJI CCNNGG 6 cut(s) 30, 46, 138, 396, 672, 1124
BsaWI WCCGGW 6 cut(s) 153, 363, 514, 883, 959, 966
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 156, 225, 305, 650, 966
Bse118I RCCGGY 2 cut(s) 363, 966
Bse1I ACTGG 1 cut(s) 1346
Bse3DI GCAATG 1 cut(s) 663
BseBI CCWGG 2 cut(s) 397, 1126
BseDI CCNNGG 6 cut(s) 30, 46, 138, 396, 672, 1124
BseGI GGATG 3 cut(s) 81, 640, 1391
BseLI CCNNNNNNNGG 6 cut(s) 47, 156, 225, 305, 650, 966
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 5 cut(s) 133, 135, 456, 807, 1163
BseNI ACTGG 1 cut(s) 1346
BseSI GKGCMC 1 cut(s) 250
BseXI GCAGC 2 cut(s) 9, 866
Bsh1285I CGRYCG 1 cut(s) 868
BshFI GGCC 4 cut(s) 602, 762, 1129, 1158
BshTI ACCGGT 2 cut(s) 363, 966
BsiEI CGRYCG 1 cut(s) 868
BsiHKAI GWGCWC 4 cut(s) 250, 363, 598, 822
BsiSI CCGG 6 cut(s) 154, 364, 515, 884, 960, 967
BslFI GGGAC 1 cut(s) 1103
BslI CCNNNNNNNGG 6 cut(s) 47, 156, 225, 305, 650, 966
BsmAI GTCTC 4 cut(s) 689, 1181, 1215, 1299
BsmFI GGGAC 1 cut(s) 1103
BsmI GAATGC 2 cut(s) 5, 552
BsnI GGCC 4 cut(s) 602, 762, 1129, 1158
Bso31I GGTCTC 2 cut(s) 1215, 1299
Bsp119I TTCGAA 1 cut(s) 9
Bsp1286I GDGCHC 4 cut(s) 250, 363, 598, 822
Bsp143I GATC 4 cut(s) 210, 392, 865, 1333
Bsp19I CCATGG 1 cut(s) 46
BspACI CCGC 4 cut(s) 900, 986, 1239, 1357
BspANI GGCC 4 cut(s) 602, 762, 1129, 1158
BspCNI CTCAG 5 cut(s) 132, 136, 455, 808, 1164
BspLI GGNNCC 3 cut(s) 235, 311, 394
BspOI GCTAGC 1 cut(s) 1194
BspPI GGATC 3 cut(s) 387, 400, 1328
BspT104I TTCGAA 1 cut(s) 9
BspTNI GGTCTC 2 cut(s) 1215, 1299
BsrDI GCAATG 1 cut(s) 663
BsrFI RCCGGY 2 cut(s) 363, 966
BsrI ACTGG 1 cut(s) 1346
BssAI RCCGGY 2 cut(s) 363, 966
BssECI CCNNGG 6 cut(s) 30, 46, 138, 396, 672, 1124
BssMI GATC 4 cut(s) 210, 392, 865, 1333
BssNI GRCGYC 1 cut(s) 1116
BssT1I CCWWGG 4 cut(s) 30, 46, 138, 672
Bst2UI CCWGG 2 cut(s) 397, 1126
Bst4CI ACNGT 5 cut(s) 801, 892, 1065, 1232, 1265
BstACI GRCGYC 1 cut(s) 1116
BstAPI GCANNNNNTGC 1 cut(s) 464
BstBI TTCGAA 1 cut(s) 9
BstC8I GCNNGC 3 cut(s) 421, 552, 1192
BstDEI CTNAG 9 cut(s) 119, 144, 265, 442, 750, 773, 816, 1172, 1217
BstDSI CCRYGG 1 cut(s) 46
BstF5I GGATG 3 cut(s) 81, 640, 1391
BstHHI GCGC 1 cut(s) 272
BstKTI GATC 4 cut(s) 213, 395, 868, 1336
BstMAI GTCTC 4 cut(s) 689, 1181, 1215, 1299
BstMBI GATC 4 cut(s) 210, 392, 865, 1333
BstMCI CGRYCG 1 cut(s) 868
BstMWI GCNNNNNNNGC 4 cut(s) 464, 593, 608, 1280
BstNI CCWGG 2 cut(s) 397, 1126
BstNSI RCATGY 2 cut(s) 485, 503
BstSCI CCNGG 2 cut(s) 395, 1124
BstSFI CTRYAG 2 cut(s) 453, 891
BstSLI GKGCMC 1 cut(s) 250
BstV1I GCAGC 2 cut(s) 9, 866
BstV2I GAAGAC 1 cut(s) 1257
BstX2I RGATCY 1 cut(s) 392
BstXI CCANNNNNNTGG 1 cut(s) 403
BstYI RGATCY 1 cut(s) 392
BsuI GTATCC 3 cut(s) 134, 425, 585
BsuRI GGCC 4 cut(s) 602, 762, 1129, 1158
BtgI CCRYGG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 583
BtsCI GGATG 3 cut(s) 81, 640, 1391
BtsI GCAGTG 1 cut(s) 1297
BtsIMutI CAGTG 3 cut(s) 250, 1270, 1297
Cac8I GCNNGC 3 cut(s) 421, 552, 1192
CfoI GCGC 1 cut(s) 272
Cfr10I RCCGGY 2 cut(s) 363, 966
CseI GACGC 1 cut(s) 1105
Csp6I GTAC 3 cut(s) 367, 655, 1066
CspAI ACCGGT 2 cut(s) 363, 966
CviAII CATG 9 cut(s) 47, 171, 482, 500, 558, 972, 1054, 1160, 1280
CviQI GTAC 3 cut(s) 367, 655, 1066
DdeI CTNAG 9 cut(s) 119, 144, 265, 442, 750, 773, 816, 1172, 1217
DpnI GATC 4 cut(s) 212, 394, 867, 1335
DpnII GATC 4 cut(s) 210, 392, 865, 1333
DraI TTTAAA 1 cut(s) 412
DrdI GACNNNNNNGTC 2 cut(s) 811, 1346
DseDI GACNNNNNNGTC 2 cut(s) 811, 1346
Ecl136II GAGCTC 2 cut(s) 596, 820
Eco130I CCWWGG 4 cut(s) 30, 46, 138, 672
Eco147I AGGCCT 2 cut(s) 762, 1129
Eco24I GRGCYC 2 cut(s) 598, 822
Eco31I GGTCTC 2 cut(s) 1215, 1299
Eco53kI GAGCTC 2 cut(s) 596, 820
Eco57I CTGAAG 1 cut(s) 777
EcoICRI GAGCTC 2 cut(s) 596, 820
EcoRII CCWGG 2 cut(s) 395, 1124
EcoT14I CCWWGG 4 cut(s) 30, 46, 138, 672
EcoT38I GRGCYC 2 cut(s) 598, 822
ErhI CCWWGG 4 cut(s) 30, 46, 138, 672
FaeI CATG 9 cut(s) 50, 174, 485, 503, 561, 975, 1057, 1163, 1283
FalI AAGNNNNNCTT 4 cut(s) 815, 847, 1210, 1242
FaqI GGGAC 1 cut(s) 1103
FatI CATG 9 cut(s) 46, 170, 481, 499, 557, 971, 1053, 1159, 1279
FauI CCCGC 1 cut(s) 993
FauNDI CATATG 1 cut(s) 538
FbaI TGATCA 1 cut(s) 210
FblI GTMKAC 1 cut(s) 871
Fnu4HI GCNGC 3 cut(s) 23, 855, 1240
FokI GGATG 3 cut(s) 68, 627, 1398
FriOI GRGCYC 2 cut(s) 598, 822
Fsp4HI GCNGC 3 cut(s) 23, 855, 1240
FspBI CTAG 1 cut(s) 1191
GlaI GCGC 1 cut(s) 271
GluI GCNGC 3 cut(s) 23, 855, 1240
GsuI CTGGAG 2 cut(s) 329, 1165
HaeIII GGCC 4 cut(s) 602, 762, 1129, 1158
HapII CCGG 6 cut(s) 154, 364, 515, 884, 960, 967
HgaI GACGC 1 cut(s) 1105
HhaI GCGC 1 cut(s) 272
Hin1I GRCGYC 1 cut(s) 1116
Hin1II CATG 9 cut(s) 50, 174, 485, 503, 561, 975, 1057, 1163, 1283
Hin6I GCGC 1 cut(s) 270
HinP1I GCGC 1 cut(s) 270
HincII GTYRAC 2 cut(s) 804, 1042
HindII GTYRAC 2 cut(s) 804, 1042
HinfI GANTC 7 cut(s) 146, 278, 377, 836, 1027, 1174, 1374
HpaI GTTAAC 1 cut(s) 1042
HpaII CCGG 6 cut(s) 154, 364, 515, 884, 960, 967
HphI GGTGA 3 cut(s) 1036, 1150, 1306
Hpy166II GTNNAC 4 cut(s) 248, 804, 872, 1042
Hpy188I TCNGA 8 cut(s) 392, 730, 788, 817, 1261, 1306, 1326, 1373
Hpy188III TCNNGA 5 cut(s) 346, 644, 683, 1182, 1337
Hpy8I GTNNAC 4 cut(s) 248, 804, 872, 1042
Hpy99I CGWCG 1 cut(s) 587
HpyAV CCTTC 3 cut(s) 752, 1007, 1421
HpyCH4III ACNGT 5 cut(s) 801, 892, 1065, 1232, 1265
HpyCH4IV ACGT 1 cut(s) 582
HpyCH4V TGCA 7 cut(s) 248, 419, 467, 795, 953, 1101, 1283
HpyF10VI GCNNNNNNNGC 4 cut(s) 464, 593, 608, 1280
HpyF3I CTNAG 9 cut(s) 119, 144, 265, 442, 750, 773, 816, 1172, 1217
HpySE526I ACGT 1 cut(s) 582
Hsp92I GRCGYC 1 cut(s) 1116
Hsp92II CATG 9 cut(s) 50, 174, 485, 503, 561, 975, 1057, 1163, 1283
HspAI GCGC 1 cut(s) 270
Ksp22I TGATCA 1 cut(s) 210
KspAI GTTAAC 1 cut(s) 1042
Kzo9I GATC 4 cut(s) 210, 392, 865, 1333
LmnI GCTCC 3 cut(s) 239, 593, 616
Lsp1109I GCAGC 2 cut(s) 9, 866
MaeI CTAG 1 cut(s) 1191
MaeII ACGT 1 cut(s) 582
MaeIII GTNAC 3 cut(s) 110, 886, 1138
MalI GATC 4 cut(s) 212, 394, 867, 1335
MboI GATC 4 cut(s) 210, 392, 865, 1333
MboII GAAGA 2 cut(s) 287, 1262
MfeI CAATTG 1 cut(s) 282
MflI RGATCY 1 cut(s) 392
MhlI GDGCHC 4 cut(s) 250, 363, 598, 822
MlyI GAGTC 3 cut(s) 155, 830, 1183
MmeI TCCRAC 2 cut(s) 174, 1351
MseI TTAA 4 cut(s) 129, 411, 998, 1041
MslI CAYNNNNRTG 2 cut(s) 51, 228
MspA1I CMGCKG 1 cut(s) 1357
MspI CCGG 6 cut(s) 154, 364, 515, 884, 960, 967
MspR9I CCNGG 2 cut(s) 397, 1126
MunI CAATTG 1 cut(s) 282
Mva1269I GAATGC 2 cut(s) 5, 552
MvaI CCWGG 2 cut(s) 397, 1126
MwoI GCNNNNNNNGC 4 cut(s) 464, 593, 608, 1280
NcoI CCATGG 1 cut(s) 46
NdeI CATATG 1 cut(s) 538
NdeII GATC 4 cut(s) 210, 392, 865, 1333
NheI GCTAGC 1 cut(s) 1190
NlaIII CATG 9 cut(s) 50, 174, 485, 503, 561, 975, 1057, 1163, 1283
NlaIV GGNNCC 3 cut(s) 235, 311, 394
NmuCI GTSAC 2 cut(s) 110, 1138
NspI RCATGY 2 cut(s) 485, 503
NspV TTCGAA 1 cut(s) 9
PceI AGGCCT 2 cut(s) 762, 1129
PciI ACATGT 1 cut(s) 481
PctI GAATGC 2 cut(s) 5, 552
PfeI GAWTC 4 cut(s) 278, 377, 1027, 1374
PflMI CCANNNNNTGG 2 cut(s) 47, 225
PinAI ACCGGT 2 cut(s) 363, 966
PkrI GCNGC 3 cut(s) 24, 856, 1241
Ple19I CGATCG 1 cut(s) 868
PleI GAGTC 3 cut(s) 154, 830, 1182
PpsI GAGTC 3 cut(s) 154, 830, 1182
PscI ACATGT 1 cut(s) 481
Psp124BI GAGCTC 2 cut(s) 598, 822
Psp6I CCWGG 2 cut(s) 395, 1124
PspGI CCWGG 2 cut(s) 395, 1124
PspN4I GGNNCC 3 cut(s) 235, 311, 394
PsuI RGATCY 1 cut(s) 392
PvuI CGATCG 1 cut(s) 868
RsaI GTAC 3 cut(s) 368, 656, 1067
RsaNI GTAC 3 cut(s) 367, 655, 1066
RseI CAYNNNNRTG 2 cut(s) 51, 228
SacI GAGCTC 2 cut(s) 598, 822
SaqAI TTAA 4 cut(s) 129, 411, 998, 1041
SatI GCNGC 3 cut(s) 23, 855, 1240
Sau3AI GATC 4 cut(s) 210, 392, 865, 1333
SchI GAGTC 3 cut(s) 155, 830, 1183
ScrFI CCNGG 2 cut(s) 397, 1126
SduI GDGCHC 4 cut(s) 250, 363, 598, 822
SfcI CTRYAG 2 cut(s) 453, 891
SfuI TTCGAA 1 cut(s) 9
SmiMI CAYNNNNRTG 2 cut(s) 51, 228
SmlI CTYRAG 2 cut(s) 766, 821
SmoI CTYRAG 2 cut(s) 766, 821
SseBI AGGCCT 2 cut(s) 762, 1129
SsiI CCGC 4 cut(s) 900, 986, 1239, 1357
SspI AATATT 1 cut(s) 742
SspMI CTAG 1 cut(s) 1191
SstI GAGCTC 2 cut(s) 598, 822
StuI AGGCCT 2 cut(s) 762, 1129
StyD4I CCNGG 2 cut(s) 395, 1124
StyI CCWWGG 4 cut(s) 30, 46, 138, 672
TaaI ACNGT 5 cut(s) 801, 892, 1065, 1232, 1265
TaiI ACGT 1 cut(s) 585
TaqI TCGA 4 cut(s) 9, 682, 839, 1080
TauI GCSGC 1 cut(s) 1242
TfiI GAWTC 4 cut(s) 278, 377, 1027, 1374
Tru1I TTAA 4 cut(s) 129, 411, 998, 1041
Tru9I TTAA 4 cut(s) 129, 411, 998, 1041
TscAI CASTG 3 cut(s) 250, 1270, 1304
TseFI GTSAC 2 cut(s) 110, 1138
TseI GCWGC 2 cut(s) 22, 854
Tsp45I GTSAC 2 cut(s) 110, 1138
TspDTI ATGAA 4 cut(s) 69, 546, 629, 1098
TspRI CASTG 3 cut(s) 250, 1270, 1304
Van91I CCANNNNNTGG 2 cut(s) 47, 225
VneI GTGCAC 1 cut(s) 246
XapI RAATTY 4 cut(s) 133, 471, 782, 1070
XceI RCATGY 2 cut(s) 485, 503
XcmI CCANNNNNNNNNTGG 2 cut(s) 587, 1286
XmiI GTMKAC 1 cut(s) 871
XspI CTAG 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.