RLG00000029188

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
34224057 .. 34227204
3148 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029188

Sequence Viewer

Length: 1515 bp
ATGAAGCAATTCACATTCTCACTCCAATCATCCCTTCTACTAATATCTCTTATATTTGTCACAACCTCAGTTTCCTTAAAAATTCCAAGGCTGAGTCCAACTGGAGCGCCATTTATACATGGTAACTATTGGACACAAGGCCGACCCAGCGAAGCTTCATCATCTGCATTTGATCCCAAAGATCTTCAGACATTTTACTACAACCAAACACTTGACCATTTCAACTTTAGGTATGATAGCTTCAATACTTTTCAACAAAGATATTTGATCAATTCCAAGCATTGGGGTGGCTCCAATATCAGTGCACCTATACTCGCTTACTTAGGCGCAGAAGAATCAATTGATATTGATATACCTATTATTGGGTTCCTACCTGAAAACGCCATTCACTTTCAAGCCCTCCAAATATATATAGAGCACCGGTACTATGGGGAATCAATCCCATTCGGATCAACGGAAGTGGCATTTAAAAATGCAAGCACTCTTGGATACTTCAACTCAGCCCAAGCTATAGCAGATTATGCAGAAATTCTCATACATGTAAAGAAGCAGCTACATGCTGAACATTCTCCAGTCATTGTTATTGGTGGCTCATATGGTGGAATGCTTGCTTCATGGTTTCGTCTAAAGTATCCCCACATCGCTCTTGGAGCTCTGGCCTCATCAGCTCCAATTCTATATTTTGATGACATAGTTCCGCCAGAAACAGGATACTACTCCATTGTCACCAAGGATTTTCGAGAAGCTAGTGAGACTTGCTACCAAATCATAAAGAAGTCTTGGTCTGAAATTGATATTATTGCTTCTAAGCCTGAAGGCCTCTCAAGTCTTAGCAAGAAATTCCGCACATGCAGACCGTTGACCACGTCGTCTGAGCTCAAGGACTACTTGGACTCGATGTATGCTAGGGCTGCTCAATACGATCGTCCACCGAATTATCCGGTTACTGTAGTCTGCGGTGGCATTGATGGAGCTTCATCTACAGATGATATTTTGACAAAAATATTTGCAGGTGTGGTTGCATATACCGGAAACCTGTCATGCTATGTCAACCAGCCCAGAAATGTAACAGAAAGACACGTGGGGTGGGCCTGGCAGACATGTAGTGACATGGTGATTCCCATAAGTGTGAACAACGACACCATGTTTCCACCGTACAAATTTGATCTAAGTGAATTTATCAATAACTGCAAGGCAACCTATGGCGTCCCTCCCAGGCCTAATTGGGTGACTACCTACTTTGGAGGCCATGACATAAAACTGAGTCTGTCCAAGTTTGCTAGCAACATCATTTTCTCCAATGGGCTAAGAGACCCTTACAGTATTGGCGGCGTTTTGGAAGACATATCAGACAGTGTAGTAGCCGTCCATACAAAGAATGGGTCTCACTGCTTGGATATTTTCACCTCAAACCATACCGATCCAGACTGGTTGGTCAATCAACGAAAAAGTGAGGTCAGAATCATCAAAGGATGGATGGCTAAATACTATGCTGACCTTCAAGCTCTCCTATAA

Protein Analysis

505

Amino Acids

56.44

Weight (kDa)

6.16

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 69 - 483 1.1e-72 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1001
AasI GACNNNNNNGTC 2 cut(s) 868, 1433
Acc36I ACCTGC 1 cut(s) 1001
AccB7I CCANNNNNTGG 1 cut(s) 282
AciI CCGC 4 cut(s) 698, 844, 957, 1329
AclWI GGATC 3 cut(s) 167, 457, 1415
AcsI RAATTY 5 cut(s) 81, 528, 839, 1160, 1175
AcuI CTGAAG 2 cut(s) 170, 834
AcvI CACGTG 1 cut(s) 1081
AcyI GRCGYC 1 cut(s) 1206
AfaI GTAC 2 cut(s) 425, 1157
AfiI CCNNNNNNNGG 3 cut(s) 282, 362, 707
AflIII ACRYGT 3 cut(s) 538, 1078, 1100
AgeI ACCGGT 1 cut(s) 420
AgsI TTSAA 6 cut(s) 223, 244, 254, 395, 496, 1502
AjiI CACGTC 1 cut(s) 867
AjnI CCWGG 2 cut(s) 1091, 1214
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
Alw21I GWGCWC 4 cut(s) 307, 420, 655, 879
Alw26I GTCTC 3 cut(s) 746, 1305, 1389
Alw44I GTGCAC 1 cut(s) 303
AlwI GGATC 3 cut(s) 167, 457, 1415
AoxI GGCC 6 cut(s) 139, 657, 817, 1089, 1217, 1246
ApaLI GTGCAC 1 cut(s) 303
ApeKI GCWGC 2 cut(s) 550, 911
ApoI RAATTY 5 cut(s) 81, 528, 839, 1160, 1175
ArsI GACNNNNNNTTYG 2 cut(s) 1367, 1399
AsiGI ACCGGT 1 cut(s) 420
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 2 cut(s) 109, 329
AspS9I GGNCC 1 cut(s) 1089
AsuHPI GGTGA 4 cut(s) 718, 1126, 1240, 1396
AsuNHI GCTAGC 1 cut(s) 1280
BaeGI GKGCMC 1 cut(s) 307
BanII GRGCYC 2 cut(s) 655, 879
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BbrPI CACGTG 1 cut(s) 1081
BbsI GAAGAC 1 cut(s) 1347
Bbv12I GWGCWC 4 cut(s) 307, 420, 655, 879
BbvI GCAGC 2 cut(s) 562, 898
BccI CCATC 3 cut(s) 962, 1467, 1471
BceAI ACGGC 1 cut(s) 1349
BciT130I CCWGG 2 cut(s) 1093, 1216
BciVI GTATCC 3 cut(s) 482, 642, 704
BclI TGATCA 1 cut(s) 267
BcoDI GTCTC 3 cut(s) 746, 1305, 1389
BfaI CTAG 3 cut(s) 747, 906, 1281
BfmI CTRYAG 3 cut(s) 510, 948, 981
BfoI RGCGCY 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 1001
BfuI GTATCC 3 cut(s) 482, 642, 704
BglII AGATCT 1 cut(s) 181
BisI GCNGC 3 cut(s) 551, 912, 1330
BlsI GCNGC 3 cut(s) 552, 913, 1331
Bme1390I CCNGG 2 cut(s) 1093, 1216
BmgBI CACGTC 1 cut(s) 867
BmgT120I GGNCC 1 cut(s) 1089
BmiI GGNNCC 2 cut(s) 292, 368
BmrFI CCNGG 2 cut(s) 1093, 1216
BmtI GCTAGC 1 cut(s) 1284
BpiI GAAGAC 1 cut(s) 1347
BpmI CTGGAG 2 cut(s) 123, 555
BpuEI CTTGAG 2 cut(s) 808, 863
BsaAI YACGTR 1 cut(s) 1081
BsaHI GRCGYC 1 cut(s) 1206
BsaI GGTCTC 2 cut(s) 1305, 1389
BsaJI CCNNGG 3 cut(s) 86, 729, 1214
BsaWI WCCGGW 3 cut(s) 420, 940, 1028
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 362, 707
Bse118I RCCGGY 1 cut(s) 420
Bse1I ACTGG 3 cut(s) 106, 572, 1433
BseBI CCWGG 2 cut(s) 1093, 1216
BseDI CCNNGG 3 cut(s) 86, 729, 1214
BseGI GGATG 3 cut(s) 29, 1478, 1482
BseLI CCNNNNNNNGG 3 cut(s) 282, 362, 707
BseMII CTCAG 5 cut(s) 81, 83, 513, 864, 1253
BseNI ACTGG 3 cut(s) 106, 572, 1433
BseSI GKGCMC 1 cut(s) 307
BseXI GCAGC 2 cut(s) 562, 898
BseYI CCCAGC 1 cut(s) 146
Bsh1285I CGRYCG 1 cut(s) 925
BshFI GGCC 6 cut(s) 141, 659, 819, 1091, 1219, 1248
BshTI ACCGGT 1 cut(s) 420
BsiEI CGRYCG 1 cut(s) 925
BsiHKAI GWGCWC 4 cut(s) 307, 420, 655, 879
BsiSI CCGG 3 cut(s) 421, 941, 1029
BslFI GGGAC 1 cut(s) 1193
BslI CCNNNNNNNGG 3 cut(s) 282, 362, 707
BsmAI GTCTC 3 cut(s) 746, 1305, 1389
BsmFI GGGAC 1 cut(s) 1193
BsmI GAATGC 1 cut(s) 609
BsnI GGCC 6 cut(s) 141, 659, 819, 1091, 1219, 1248
Bso31I GGTCTC 2 cut(s) 1305, 1389
Bsp1286I GDGCHC 4 cut(s) 307, 420, 655, 879
Bsp143I GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
BspACI CCGC 4 cut(s) 698, 844, 957, 1329
BspANI GGCC 6 cut(s) 141, 659, 819, 1091, 1219, 1248
BspCNI CTCAG 5 cut(s) 80, 84, 512, 865, 1254
BspLI GGNNCC 2 cut(s) 292, 368
BspMI ACCTGC 1 cut(s) 1001
BspOI GCTAGC 1 cut(s) 1284
BspPI GGATC 3 cut(s) 167, 457, 1415
BspTNI GGTCTC 2 cut(s) 1305, 1389
BsrFI RCCGGY 1 cut(s) 420
BsrI ACTGG 3 cut(s) 106, 572, 1433
BssAI RCCGGY 1 cut(s) 420
BssECI CCNNGG 3 cut(s) 86, 729, 1214
BssMI GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
BssNI GRCGYC 1 cut(s) 1206
BssT1I CCWWGG 2 cut(s) 86, 729
Bst2UI CCWGG 2 cut(s) 1093, 1216
Bst4CI ACNGT 5 cut(s) 858, 949, 1155, 1322, 1355
BstACI GRCGYC 1 cut(s) 1206
BstAPI GCANNNNNTGC 1 cut(s) 521
BstBAI YACGTR 1 cut(s) 1081
BstC8I GCNNGC 3 cut(s) 478, 609, 1282
BstF5I GGATG 3 cut(s) 29, 1478, 1482
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 329
BstKTI GATC 7 cut(s) 175, 184, 270, 452, 925, 1168, 1423
BstMAI GTCTC 3 cut(s) 746, 1305, 1389
BstMBI GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
BstMCI CGRYCG 1 cut(s) 925
BstMWI GCNNNNNNNGC 5 cut(s) 147, 521, 650, 665, 911
BstNI CCWGG 2 cut(s) 1093, 1216
BstNSI RCATGY 4 cut(s) 542, 560, 852, 1104
BstSCI CCNGG 2 cut(s) 1091, 1214
BstSFI CTRYAG 3 cut(s) 510, 948, 981
BstSLI GKGCMC 1 cut(s) 307
BstV1I GCAGC 2 cut(s) 562, 898
BstV2I GAAGAC 1 cut(s) 1347
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
BsuI GTATCC 3 cut(s) 482, 642, 704
BsuRI GGCC 6 cut(s) 141, 659, 819, 1091, 1219, 1248
BtgZI GCGATG 1 cut(s) 625
BtrI CACGTC 1 cut(s) 867
BtsCI GGATG 3 cut(s) 29, 1478, 1482
BtsI GCAGTG 1 cut(s) 1387
BtsIMutI CAGTG 3 cut(s) 307, 1360, 1387
BveI ACCTGC 1 cut(s) 1001
Cac8I GCNNGC 3 cut(s) 478, 609, 1282
CfoI GCGC 2 cut(s) 109, 329
Cfr10I RCCGGY 1 cut(s) 420
Cfr13I GGNCC 1 cut(s) 1089
CseI GACGC 1 cut(s) 1195
Csp6I GTAC 2 cut(s) 424, 1156
CspAI ACCGGT 1 cut(s) 420
CspCI CAANNNNNGTGG 2 cut(s) 441, 476
CviQI GTAC 2 cut(s) 424, 1156
DpnI GATC 7 cut(s) 174, 183, 269, 451, 924, 1167, 1422
DpnII GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
DraI TTTAAA 1 cut(s) 469
DrdI GACNNNNNNGTC 2 cut(s) 868, 1433
DseDI GACNNNNNNGTC 2 cut(s) 868, 1433
EciI GGCGGA 1 cut(s) 687
Ecl136II GAGCTC 2 cut(s) 653, 877
Eco130I CCWWGG 2 cut(s) 86, 729
Eco147I AGGCCT 2 cut(s) 819, 1219
Eco24I GRGCYC 2 cut(s) 655, 879
Eco31I GGTCTC 2 cut(s) 1305, 1389
Eco53kI GAGCTC 2 cut(s) 653, 877
Eco57I CTGAAG 2 cut(s) 170, 834
Eco72I CACGTG 1 cut(s) 1081
EcoICRI GAGCTC 2 cut(s) 653, 877
EcoRII CCWGG 2 cut(s) 1091, 1214
EcoT14I CCWWGG 2 cut(s) 86, 729
EcoT38I GRGCYC 2 cut(s) 655, 879
ErhI CCWWGG 2 cut(s) 86, 729
FalI AAGNNNNNCTT 4 cut(s) 872, 904, 1300, 1332
FaqI GGGAC 1 cut(s) 1193
FauNDI CATATG 1 cut(s) 595
FbaI TGATCA 1 cut(s) 267
Fnu4HI GCNGC 3 cut(s) 551, 912, 1330
FokI GGATG 3 cut(s) 16, 1485, 1489
FriOI GRGCYC 2 cut(s) 655, 879
Fsp4HI GCNGC 3 cut(s) 551, 912, 1330
FspBI CTAG 3 cut(s) 747, 906, 1281
GlaI GCGC 2 cut(s) 108, 328
GluI GCNGC 3 cut(s) 551, 912, 1330
GsaI CCCAGC 1 cut(s) 150
GsuI CTGGAG 2 cut(s) 123, 555
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 6 cut(s) 141, 659, 819, 1091, 1219, 1248
HapII CCGG 3 cut(s) 421, 941, 1029
HgaI GACGC 1 cut(s) 1195
HhaI GCGC 2 cut(s) 109, 329
Hin1I GRCGYC 1 cut(s) 1206
Hin6I GCGC 2 cut(s) 107, 327
HinP1I GCGC 2 cut(s) 107, 327
HincII GTYRAC 2 cut(s) 861, 1051
HindII GTYRAC 2 cut(s) 861, 1051
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 7 cut(s) 94, 335, 434, 893, 1117, 1264, 1461
HpaII CCGG 3 cut(s) 421, 941, 1029
HphI GGTGA 4 cut(s) 718, 1126, 1240, 1396
Hpy166II GTNNAC 5 cut(s) 305, 861, 929, 1051, 1132
Hpy188I TCNGA 6 cut(s) 189, 449, 787, 874, 1351, 1460
Hpy188III TCNNGA 2 cut(s) 740, 1424
Hpy8I GTNNAC 5 cut(s) 305, 861, 929, 1051, 1132
Hpy99I CGWCG 1 cut(s) 871
HpyAV CCTTC 3 cut(s) 44, 809, 1508
HpyCH4III ACNGT 5 cut(s) 858, 949, 1155, 1322, 1355
HpyCH4IV ACGT 2 cut(s) 866, 1080
HpyCH4V TGCA 8 cut(s) 167, 305, 476, 524, 852, 1010, 1022, 1191
HpyF10VI GCNNNNNNNGC 5 cut(s) 147, 521, 650, 665, 911
HpySE526I ACGT 2 cut(s) 866, 1080
Hsp92I GRCGYC 1 cut(s) 1206
HspAI GCGC 2 cut(s) 107, 327
Ksp22I TGATCA 1 cut(s) 267
Kzo9I GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
LmnI GCTCC 5 cut(s) 104, 296, 650, 673, 971
Lsp1109I GCAGC 2 cut(s) 562, 898
MaeI CTAG 3 cut(s) 747, 906, 1281
MaeII ACGT 2 cut(s) 866, 1080
MaeIII GTNAC 7 cut(s) 58, 122, 724, 943, 1066, 1106, 1228
MalI GATC 7 cut(s) 174, 183, 269, 451, 924, 1167, 1422
MboI GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
MboII GAAGA 3 cut(s) 176, 344, 1352
MfeI CAATTG 1 cut(s) 339
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 4 cut(s) 307, 420, 655, 879
MlyI GAGTC 3 cut(s) 103, 887, 1273
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 8 cut(s) 76, 410, 670, 830, 1221, 1238, 1417, 1447
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 2 cut(s) 77, 468
MslI CAYNNNNRTG 2 cut(s) 285, 1127
MspI CCGG 3 cut(s) 421, 941, 1029
MspR9I CCNGG 2 cut(s) 1093, 1216
MunI CAATTG 1 cut(s) 339
Mva1269I GAATGC 1 cut(s) 609
MvaI CCWGG 2 cut(s) 1093, 1216
MwoI GCNNNNNNNGC 5 cut(s) 147, 521, 650, 665, 911
NdeI CATATG 1 cut(s) 595
NdeII GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
NheI GCTAGC 1 cut(s) 1280
NlaIV GGNNCC 2 cut(s) 292, 368
NmuCI GTSAC 4 cut(s) 58, 724, 1106, 1228
NspI RCATGY 4 cut(s) 542, 560, 852, 1104
PaqCI CACCTGC 1 cut(s) 1001
PceI AGGCCT 2 cut(s) 819, 1219
PciI ACATGT 2 cut(s) 538, 1100
PctI GAATGC 1 cut(s) 609
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 4 cut(s) 335, 434, 1117, 1461
PflFI GACNNNGTC 1 cut(s) 865
PflMI CCANNNNNTGG 1 cut(s) 282
PinAI ACCGGT 1 cut(s) 420
PkrI GCNGC 3 cut(s) 552, 913, 1331
Ple19I CGATCG 1 cut(s) 925
PleI GAGTC 3 cut(s) 102, 887, 1272
PmaCI CACGTG 1 cut(s) 1081
PmlI CACGTG 1 cut(s) 1081
PpsI GAGTC 3 cut(s) 102, 887, 1272
Ppu21I YACGTR 1 cut(s) 1081
PscI ACATGT 2 cut(s) 538, 1100
Psp124BI GAGCTC 2 cut(s) 655, 879
Psp6I CCWGG 2 cut(s) 1091, 1214
PspCI CACGTG 1 cut(s) 1081
PspFI CCCAGC 1 cut(s) 146
PspGI CCWGG 2 cut(s) 1091, 1214
PspN4I GGNNCC 2 cut(s) 292, 368
PspPI GGNCC 1 cut(s) 1089
PsuI RGATCY 1 cut(s) 181
PsyI GACNNNGTC 1 cut(s) 865
PvuI CGATCG 1 cut(s) 925
RsaI GTAC 2 cut(s) 425, 1157
RsaNI GTAC 2 cut(s) 424, 1156
RseI CAYNNNNRTG 2 cut(s) 285, 1127
SacI GAGCTC 2 cut(s) 655, 879
SaqAI TTAA 2 cut(s) 77, 468
SatI GCNGC 3 cut(s) 551, 912, 1330
Sau3AI GATC 7 cut(s) 172, 181, 267, 449, 922, 1165, 1420
Sau96I GGNCC 1 cut(s) 1089
SchI GAGTC 3 cut(s) 103, 887, 1273
ScrFI CCNGG 2 cut(s) 1093, 1216
SduI GDGCHC 4 cut(s) 307, 420, 655, 879
SfcI CTRYAG 3 cut(s) 510, 948, 981
SmiMI CAYNNNNRTG 2 cut(s) 285, 1127
SmlI CTYRAG 2 cut(s) 823, 878
SmoI CTYRAG 2 cut(s) 823, 878
SseBI AGGCCT 2 cut(s) 819, 1219
SsiI CCGC 4 cut(s) 698, 844, 957, 1329
SspI AATATT 1 cut(s) 1005
SspMI CTAG 3 cut(s) 747, 906, 1281
SstI GAGCTC 2 cut(s) 655, 879
StuI AGGCCT 2 cut(s) 819, 1219
StyD4I CCNGG 2 cut(s) 1091, 1214
StyI CCWWGG 2 cut(s) 86, 729
TaaI ACNGT 5 cut(s) 858, 949, 1155, 1322, 1355
TaiI ACGT 2 cut(s) 869, 1083
TaqI TCGA 2 cut(s) 739, 896
TauI GCSGC 1 cut(s) 1332
TfiI GAWTC 4 cut(s) 335, 434, 1117, 1461
Tru1I TTAA 2 cut(s) 77, 468
Tru9I TTAA 2 cut(s) 77, 468
TscAI CASTG 3 cut(s) 307, 1360, 1394
TseFI GTSAC 4 cut(s) 58, 724, 1106, 1228
TseI GCWGC 2 cut(s) 550, 911
Tsp45I GTSAC 4 cut(s) 58, 724, 1106, 1228
TspDTI ATGAA 4 cut(s) 17, 147, 603, 966
TspGWI ACGGA 1 cut(s) 470
TspRI CASTG 3 cut(s) 307, 1360, 1394
Tth111I GACNNNGTC 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 282
VneI GTGCAC 1 cut(s) 303
XapI RAATTY 5 cut(s) 81, 528, 839, 1160, 1175
XceI RCATGY 4 cut(s) 542, 560, 852, 1104
XcmI CCANNNNNNNNNTGG 2 cut(s) 644, 1376
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 3 cut(s) 747, 906, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.