Rh5BG380300

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
60236924 .. 60316008
79085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG380300.1

Sequence Viewer

Length: 1485 bp
ATGGAAATGAGGCGACTGACATTCTCACTCCAATCATCCCTTATACTAATATCTCTTATATTTGTCACAACCTCAGTTTCCTTAAAAATTCCAAGGCTGAGTCCAACTGGAGGGCAATTTATACATGGTAACTATTGGACAAAAAGCCGACCCAGCGAAGCTTCATCACCTGCATTTGATCCCAAAGATTTTCAGACATTTTATTACAACCAAACACTTGACCATTTCAACTTTAGGTATGATAGCTTCAATACTTTTCAACAAAGATATTTGATCAATTCCAAGCATTGGGGTGGCTCCAATATCAGTGCACCAATTCTCGCTTACTTAGGCGCAGAAGAGTCAATTGATGTTGATATACCTATTATTGGGTTCCTACCTGAAAACGCCATTCACTTTCAAGCCCTCCAGATATATATAGAGCACCGGTACTATGGGGAATCAATCCCATTCGGATCCAGGGAAGTGGCATTTAAAAATGCAAGCACTCTTGGATACTTCAACTCAGCCCAAGCTATAACAGATTATGCAGAAATACTCATACATGTAAAGAAGCAACTACATGCTGAACATTCTCCGGTCATTGTTATTGGTGGCTCATATGGTGGAATGCTTGCTTCATGGTTTCGCCTAAAGTATCCCCACGTCGCTCTTGGAGCTCTGGCCTCATCAGCTCCAATTCTATACTTTGATGACATAGTTCCTCCAGAAACAGGGTACTACTCCATTGCCACCAAGGATTATCGAGAAGCGAGTGAGACTTGCTACCAAATCATAAAGAAGTCTTGGTCTGAAATTGATAATATTGCATCTAAGCCTGAAGGCCTCTCAAATCTTAGCAAGAAATTCCGAACTTGCAGACCGTTGACCAAGTCGTCTGAGCTCAAGGATTACTTGGACTCGATGTATACTAGGGCAGCTCAATACGATCGTCCACCGAATTATCCGGTTACTGTAGTCTGCGGTGGCATTGATGGAGCTTCAACTACAGATGATATTTTGACAAAAATATTTGCAGGTGTGGTTGCTTATACAGGAAACCGGTCATGCTATGTCAACCCGCCCAAAAACCTGACAGAAACAGACGAGGGGTGGGGATGGCAGACATGTAGTGACATGGTGATTCCCATAAGCGTGAACAACGACACCATGTTTCCACCGTACAAATTTGATGTCGATGAATATATCAATAAATGCAAGGCAACCTATGGCGTCCCTCCCAGGCCTAATTGGGTGACTACATACTTTGGAGGCCATGACATAAAACTGAGTCTCTCCAGATTTGCTAGCAACATCATTTTCTCCAATGGGCTAAGAGACCCTTACAGTATTGGCGGCGTTTTGGAAGACATATCAGACAGTGTGGTTGCTGTCCATGCAAAAAATGGTATGTATCCTTCCAAATTCATTTGTTTGGAGTACCCCATGTTACGAGTTTTAGGGCAGTACATATTTTCGTTTAACTTTTCAACTACCCAAAATTAA

Protein Analysis

494

Amino Acids

55.6

Weight (kDa)

6.27

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 71 - 459 2.8e-64 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 178, 1007
AasI GACNNNNNNGTC 1 cut(s) 874
Acc36I ACCTGC 2 cut(s) 178, 1007
AccB7I CCANNNNNTGG 1 cut(s) 288
AccI GTMKAC 1 cut(s) 908
AciI CCGC 3 cut(s) 963, 1061, 1335
AclWI GGATC 3 cut(s) 173, 450, 463
AcsI RAATTY 4 cut(s) 87, 845, 1166, 1403
AcuI CTGAAG 1 cut(s) 840
AcyI GRCGYC 1 cut(s) 1212
AfaI GTAC 5 cut(s) 431, 719, 1163, 1421, 1448
AfiI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
AflIII ACRYGT 2 cut(s) 544, 1106
AgeI ACCGGT 2 cut(s) 426, 1041
AgsI TTSAA 7 cut(s) 229, 250, 260, 401, 502, 984, 1470
AjiI CACGTC 1 cut(s) 646
AjnI CCWGG 2 cut(s) 458, 1220
AluBI AGCT 8 cut(s) 161, 246, 515, 659, 674, 883, 920, 980
AluI AGCT 8 cut(s) 161, 246, 515, 659, 674, 883, 920, 980
Alw21I GWGCWC 4 cut(s) 313, 426, 661, 885
Alw26I GTCTC 3 cut(s) 752, 1277, 1311
Alw44I GTGCAC 1 cut(s) 309
AlwI GGATC 3 cut(s) 173, 450, 463
AoxI GGCC 4 cut(s) 663, 823, 1223, 1252
ApaLI GTGCAC 1 cut(s) 309
ApeKI GCWGC 1 cut(s) 917
ApoI RAATTY 4 cut(s) 87, 845, 1166, 1403
ArsI GACNNNNNNTTYG 2 cut(s) 1158, 1190
AsiGI ACCGGT 2 cut(s) 426, 1041
AspLEI GCGC 1 cut(s) 335
AsuHPI GGTGA 3 cut(s) 159, 1132, 1246
AsuNHI GCTAGC 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 313
BamHI GGATCC 1 cut(s) 455
BanII GRGCYC 2 cut(s) 661, 885
BarI GAAGNNNNNNTAC 4 cut(s) 230, 262, 1381, 1413
BbsI GAAGAC 1 cut(s) 1353
Bbv12I GWGCWC 4 cut(s) 313, 426, 661, 885
BbvI GCAGC 1 cut(s) 929
BccI CCATC 2 cut(s) 968, 1092
BciT130I CCWGG 2 cut(s) 460, 1222
BciVI GTATCC 3 cut(s) 488, 648, 1404
BclI TGATCA 1 cut(s) 273
BcoDI GTCTC 3 cut(s) 752, 1277, 1311
BfaI CTAG 2 cut(s) 912, 1287
BfmI CTRYAG 2 cut(s) 954, 987
BfuAI ACCTGC 2 cut(s) 178, 1007
BfuI GTATCC 3 cut(s) 488, 648, 1404
BisI GCNGC 2 cut(s) 918, 1336
BlsI GCNGC 2 cut(s) 919, 1337
Bme1390I CCNGG 2 cut(s) 460, 1222
BmgBI CACGTC 1 cut(s) 646
BmiI GGNNCC 3 cut(s) 298, 374, 457
BmrFI CCNGG 2 cut(s) 460, 1222
BmsI GCATC 1 cut(s) 818
BmtI GCTAGC 1 cut(s) 1290
BpiI GAAGAC 1 cut(s) 1353
BpmI CTGGAG 4 cut(s) 129, 392, 690, 1261
BpuEI CTTGAG 1 cut(s) 869
BsaHI GRCGYC 1 cut(s) 1212
BsaI GGTCTC 1 cut(s) 1311
BsaJI CCNNGG 4 cut(s) 92, 459, 735, 1220
BsaWI WCCGGW 4 cut(s) 426, 577, 946, 1041
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
Bse118I RCCGGY 2 cut(s) 426, 1041
Bse1I ACTGG 1 cut(s) 112
Bse3DI GCAATG 1 cut(s) 726
BseBI CCWGG 2 cut(s) 460, 1222
BseDI CCNNGG 4 cut(s) 92, 459, 735, 1220
BseGI GGATG 2 cut(s) 35, 1103
BseLI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
BseMI GCAATG 1 cut(s) 726
BseMII CTCAG 5 cut(s) 87, 89, 519, 870, 1259
BseNI ACTGG 1 cut(s) 112
BseSI GKGCMC 1 cut(s) 313
BseXI GCAGC 1 cut(s) 929
BseYI CCCAGC 1 cut(s) 152
Bsh1285I CGRYCG 1 cut(s) 931
BshFI GGCC 4 cut(s) 665, 825, 1225, 1254
BshTI ACCGGT 2 cut(s) 426, 1041
BsiEI CGRYCG 1 cut(s) 931
BsiHKAI GWGCWC 4 cut(s) 313, 426, 661, 885
BsiSI CCGG 4 cut(s) 427, 578, 947, 1042
BslFI GGGAC 1 cut(s) 1199
BslI CCNNNNNNNGG 4 cut(s) 110, 288, 368, 713
BsmAI GTCTC 3 cut(s) 752, 1277, 1311
BsmFI GGGAC 1 cut(s) 1199
BsmI GAATGC 1 cut(s) 615
BsnI GGCC 4 cut(s) 665, 825, 1225, 1254
Bso31I GGTCTC 1 cut(s) 1311
Bsp1286I GDGCHC 4 cut(s) 313, 426, 661, 885
Bsp143I GATC 4 cut(s) 178, 273, 455, 928
BspACI CCGC 3 cut(s) 963, 1061, 1335
BspANI GGCC 4 cut(s) 665, 825, 1225, 1254
BspCNI CTCAG 5 cut(s) 86, 90, 518, 871, 1260
BspLI GGNNCC 3 cut(s) 298, 374, 457
BspMI ACCTGC 2 cut(s) 178, 1007
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 3 cut(s) 173, 450, 463
BspTNI GGTCTC 1 cut(s) 1311
BsrDI GCAATG 1 cut(s) 726
BsrFI RCCGGY 2 cut(s) 426, 1041
BsrI ACTGG 1 cut(s) 112
BssAI RCCGGY 2 cut(s) 426, 1041
BssECI CCNNGG 4 cut(s) 92, 459, 735, 1220
BssMI GATC 4 cut(s) 178, 273, 455, 928
BssNAI GTATAC 1 cut(s) 909
BssNI GRCGYC 1 cut(s) 1212
BssT1I CCWWGG 2 cut(s) 92, 735
Bst1107I GTATAC 1 cut(s) 909
Bst2UI CCWGG 2 cut(s) 460, 1222
Bst4CI ACNGT 5 cut(s) 864, 955, 1161, 1328, 1361
Bst6I CTCTTC 1 cut(s) 333
BstACI GRCGYC 1 cut(s) 1212
BstC8I GCNNGC 3 cut(s) 484, 615, 1288
BstDEI CTNAG 9 cut(s) 73, 98, 328, 505, 813, 836, 879, 1268, 1313
BstF5I GGATG 2 cut(s) 35, 1103
BstHHI GCGC 1 cut(s) 335
BstKTI GATC 4 cut(s) 181, 276, 458, 931
BstMAI GTCTC 3 cut(s) 752, 1277, 1311
BstMBI GATC 4 cut(s) 178, 273, 455, 928
BstMCI CGRYCG 1 cut(s) 931
BstMWI GCNNNNNNNGC 4 cut(s) 153, 656, 671, 1376
BstNI CCWGG 2 cut(s) 460, 1222
BstNSI RCATGY 3 cut(s) 548, 566, 1110
BstSCI CCNGG 2 cut(s) 458, 1220
BstSFI CTRYAG 2 cut(s) 954, 987
BstSLI GKGCMC 1 cut(s) 313
BstV1I GCAGC 1 cut(s) 929
BstV2I GAAGAC 1 cut(s) 1353
BstX2I RGATCY 1 cut(s) 455
BstXI CCANNNNNNTGG 1 cut(s) 466
BstYI RGATCY 1 cut(s) 455
BstZ17I GTATAC 1 cut(s) 909
BsuI GTATCC 3 cut(s) 488, 648, 1404
BsuRI GGCC 4 cut(s) 665, 825, 1225, 1254
BtrI CACGTC 1 cut(s) 646
BtsCI GGATG 2 cut(s) 35, 1103
BtsIMutI CAGTG 2 cut(s) 313, 1366
BveI ACCTGC 2 cut(s) 178, 1007
Cac8I GCNNGC 3 cut(s) 484, 615, 1288
CfoI GCGC 1 cut(s) 335
Cfr10I RCCGGY 2 cut(s) 426, 1041
CseI GACGC 1 cut(s) 1201
Csp6I GTAC 5 cut(s) 430, 718, 1162, 1420, 1447
CspAI ACCGGT 2 cut(s) 426, 1041
CviQI GTAC 5 cut(s) 430, 718, 1162, 1420, 1447
DdeI CTNAG 9 cut(s) 73, 98, 328, 505, 813, 836, 879, 1268, 1313
DpnI GATC 4 cut(s) 180, 275, 457, 930
DpnII GATC 4 cut(s) 178, 273, 455, 928
DraI TTTAAA 1 cut(s) 475
DrdI GACNNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 874
Eam1104I CTCTTC 1 cut(s) 333
EarI CTCTTC 1 cut(s) 333
Ecl136II GAGCTC 2 cut(s) 659, 883
Eco130I CCWWGG 2 cut(s) 92, 735
Eco147I AGGCCT 2 cut(s) 825, 1225
Eco24I GRGCYC 2 cut(s) 661, 885
Eco31I GGTCTC 1 cut(s) 1311
Eco53kI GAGCTC 2 cut(s) 659, 883
Eco57I CTGAAG 1 cut(s) 840
EcoICRI GAGCTC 2 cut(s) 659, 883
EcoRII CCWGG 2 cut(s) 458, 1220
EcoT14I CCWWGG 2 cut(s) 92, 735
EcoT38I GRGCYC 2 cut(s) 661, 885
ErhI CCWWGG 2 cut(s) 92, 735
FalI AAGNNNNNCTT 4 cut(s) 878, 910, 1306, 1338
FaqI GGGAC 1 cut(s) 1199
FauI CCCGC 1 cut(s) 1068
FauNDI CATATG 1 cut(s) 601
FbaI TGATCA 1 cut(s) 273
FblI GTMKAC 1 cut(s) 908
Fnu4HI GCNGC 2 cut(s) 918, 1336
FokI GGATG 2 cut(s) 22, 1110
FriOI GRGCYC 2 cut(s) 661, 885
Fsp4HI GCNGC 2 cut(s) 918, 1336
FspBI CTAG 2 cut(s) 912, 1287
GlaI GCGC 1 cut(s) 334
GluI GCNGC 2 cut(s) 918, 1336
GsaI CCCAGC 1 cut(s) 156
GsuI CTGGAG 4 cut(s) 129, 392, 690, 1261
HaeIII GGCC 4 cut(s) 665, 825, 1225, 1254
HapII CCGG 4 cut(s) 427, 578, 947, 1042
HgaI GACGC 1 cut(s) 1201
HhaI GCGC 1 cut(s) 335
Hin1I GRCGYC 1 cut(s) 1212
Hin6I GCGC 1 cut(s) 333
HinP1I GCGC 1 cut(s) 333
HincII GTYRAC 2 cut(s) 867, 1057
HindII GTYRAC 2 cut(s) 867, 1057
HindIII AAGCTT 1 cut(s) 159
HinfI GANTC 6 cut(s) 100, 341, 440, 899, 1123, 1270
HpaII CCGG 4 cut(s) 427, 578, 947, 1042
HphI GGTGA 3 cut(s) 159, 1132, 1246
Hpy166II GTNNAC 6 cut(s) 311, 867, 909, 935, 1057, 1138
Hpy188I TCNGA 6 cut(s) 195, 455, 793, 851, 880, 1357
Hpy188III TCNNGA 4 cut(s) 409, 707, 746, 1278
Hpy8I GTNNAC 6 cut(s) 311, 867, 909, 935, 1057, 1138
Hpy99I CGWCG 1 cut(s) 650
HpyAV CCTTC 2 cut(s) 815, 1407
HpyCH4III ACNGT 5 cut(s) 864, 955, 1161, 1328, 1361
HpyCH4IV ACGT 1 cut(s) 645
HpyCH4V TGCA 9 cut(s) 173, 311, 482, 530, 809, 858, 1016, 1197, 1379
HpyF10VI GCNNNNNNNGC 4 cut(s) 153, 656, 671, 1376
HpyF3I CTNAG 9 cut(s) 73, 98, 328, 505, 813, 836, 879, 1268, 1313
HpySE526I ACGT 1 cut(s) 645
Hsp92I GRCGYC 1 cut(s) 1212
HspAI GCGC 1 cut(s) 333
Ksp22I TGATCA 1 cut(s) 273
Kzo9I GATC 4 cut(s) 178, 273, 455, 928
LmnI GCTCC 4 cut(s) 302, 656, 679, 977
Lsp1109I GCAGC 1 cut(s) 929
LweI GCATC 1 cut(s) 818
MaeI CTAG 2 cut(s) 912, 1287
MaeII ACGT 1 cut(s) 645
MaeIII GTNAC 6 cut(s) 64, 128, 949, 1112, 1234, 1428
MalI GATC 4 cut(s) 180, 275, 457, 930
MboI GATC 4 cut(s) 178, 273, 455, 928
MboII GAAGA 2 cut(s) 350, 1358
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 1 cut(s) 455
MhlI GDGCHC 4 cut(s) 313, 426, 661, 885
MlyI GAGTC 4 cut(s) 109, 350, 893, 1279
MmeI TCCRAC 1 cut(s) 128
MseI TTAA 4 cut(s) 83, 474, 1461, 1483
MslI CAYNNNNRTG 2 cut(s) 291, 1133
MspI CCGG 4 cut(s) 427, 578, 947, 1042
MspR9I CCNGG 2 cut(s) 460, 1222
MunI CAATTG 1 cut(s) 345
Mva1269I GAATGC 1 cut(s) 615
MvaI CCWGG 2 cut(s) 460, 1222
MwoI GCNNNNNNNGC 4 cut(s) 153, 656, 671, 1376
NdeI CATATG 1 cut(s) 601
NdeII GATC 4 cut(s) 178, 273, 455, 928
NheI GCTAGC 1 cut(s) 1286
NlaIV GGNNCC 3 cut(s) 298, 374, 457
NmuCI GTSAC 3 cut(s) 64, 1112, 1234
NspI RCATGY 3 cut(s) 548, 566, 1110
PaqCI CACCTGC 2 cut(s) 178, 1007
PceI AGGCCT 2 cut(s) 825, 1225
PciI ACATGT 2 cut(s) 544, 1106
PctI GAATGC 1 cut(s) 615
PfeI GAWTC 2 cut(s) 440, 1123
PflFI GACNNNGTC 1 cut(s) 871
PflMI CCANNNNNTGG 1 cut(s) 288
PinAI ACCGGT 2 cut(s) 426, 1041
PkrI GCNGC 2 cut(s) 919, 1337
Ple19I CGATCG 1 cut(s) 931
PleI GAGTC 4 cut(s) 108, 349, 893, 1278
PpsI GAGTC 4 cut(s) 108, 349, 893, 1278
PscI ACATGT 2 cut(s) 544, 1106
Psp124BI GAGCTC 2 cut(s) 661, 885
Psp6I CCWGG 2 cut(s) 458, 1220
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 2 cut(s) 458, 1220
PspN4I GGNNCC 3 cut(s) 298, 374, 457
PsuI RGATCY 1 cut(s) 455
PsyI GACNNNGTC 1 cut(s) 871
PvuI CGATCG 1 cut(s) 931
RsaI GTAC 5 cut(s) 431, 719, 1163, 1421, 1448
RsaNI GTAC 5 cut(s) 430, 718, 1162, 1420, 1447
RseI CAYNNNNRTG 2 cut(s) 291, 1133
SacI GAGCTC 2 cut(s) 661, 885
SaqAI TTAA 4 cut(s) 83, 474, 1461, 1483
SatI GCNGC 2 cut(s) 918, 1336
Sau3AI GATC 4 cut(s) 178, 273, 455, 928
SchI GAGTC 4 cut(s) 109, 350, 893, 1279
ScrFI CCNGG 2 cut(s) 460, 1222
SduI GDGCHC 4 cut(s) 313, 426, 661, 885
SfaNI GCATC 1 cut(s) 818
SfcI CTRYAG 2 cut(s) 954, 987
SmiMI CAYNNNNRTG 2 cut(s) 291, 1133
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
SseBI AGGCCT 2 cut(s) 825, 1225
SsiI CCGC 3 cut(s) 963, 1061, 1335
SspI AATATT 2 cut(s) 805, 1011
SspMI CTAG 2 cut(s) 912, 1287
SstI GAGCTC 2 cut(s) 661, 885
StuI AGGCCT 2 cut(s) 825, 1225
StyD4I CCNGG 2 cut(s) 458, 1220
StyI CCWWGG 2 cut(s) 92, 735
TaaI ACNGT 5 cut(s) 864, 955, 1161, 1328, 1361
TaiI ACGT 1 cut(s) 648
TaqI TCGA 3 cut(s) 745, 902, 1176
TatI WGTACW 1 cut(s) 1446
TauI GCSGC 1 cut(s) 1338
TfiI GAWTC 2 cut(s) 440, 1123
Tru1I TTAA 4 cut(s) 83, 474, 1461, 1483
Tru9I TTAA 4 cut(s) 83, 474, 1461, 1483
TscAI CASTG 2 cut(s) 313, 1366
TseFI GTSAC 3 cut(s) 64, 1112, 1234
TseI GCWGC 1 cut(s) 917
Tsp45I GTSAC 3 cut(s) 64, 1112, 1234
TspDTI ATGAA 4 cut(s) 153, 609, 1194, 1396
TspRI CASTG 2 cut(s) 313, 1366
Tth111I GACNNNGTC 1 cut(s) 871
Van91I CCANNNNNTGG 1 cut(s) 288
VneI GTGCAC 1 cut(s) 309
XapI RAATTY 4 cut(s) 87, 845, 1166, 1403
XceI RCATGY 3 cut(s) 548, 566, 1110
XcmI CCANNNNNNNNNTGG 2 cut(s) 650, 1382
XmiI GTMKAC 1 cut(s) 908
XspI CTAG 2 cut(s) 912, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.