Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001363

Physical Location & Seq

Genomic Coordinates Forward (+)

59234394 .. 59236241

Gene Structure 1848 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030297

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGCTCTCTCTCTCCTCTCCATCTCTGACTCTGCCTCCCAAACCTAACAAACGCCTCCTCCCCAACAAGCACAACAAGCCTTCCTGCCTCGTCCAATCCATCCTCAACCTCTGCTCCCAAGGCCAACTCTCCCAAGCCGTCTCGTCCCTCGACCTCTTATTCCGAAAGGGTATTCGCTTGCCCACCAAGACTCTCGCTTTTCTACTGCAGCACTGTGGAGACGCTCGGTCCCTCAGAGAAGGCAAATGGGTTCACTTGTATTTGAGGCTTTCCGGATTCAAACGCCCACCTTTGCTTTTGGCTAACCATTTGATTGGGATGTACTTCAAGTGCGGCGATGAGGTTGATGCACGCAAAGTGTTTGATAAAATGTTTGTGAGGAATTTGTACTCGTGGAACAATATGCTATCTGGGTATGTGAAGCTGAGGAATCTGAAGGAGGCCCGGAGCTTGTTTGAGAAAATGCCTGAGAGGGATGTTGTGTCCTGGAACACCATGGTGATTGGTTATGCCCAGACTGGGGAATGTGATGAGGCTTTGAGGTTTTATAGAGAGTTGCGGAGGTCGCCGGTTGGGTTGAATGAGTTTAGTTTTGCAGGTGTTTTGACTGTGTGTGTGAAGATGAGGGAATGGGAGCTTATAAGGCAAGCTCATGGGCAGGTTTTGGTTGCTGGGTTTTTGTCGAATGTGGTGCTTTCGAGTTCGGTGGTGGATGCTTATGCCAAATGTGGGGAGATGGTGGATGCCAGGAGATTGTTTGATGAGATGGCTGTGAGGGATGTTCTTGCTTGGACCACACTGGTTTCAGGATATGCCAAATGGGGTGATATGAAATCAGCTAGCGAGTTGTTTGATCGGATGCCTGAGAAGAACCCGGTGTCATGGACATCTATGATTTCGGGCTATGCTAGGAATGGATTGGGGCATGAAGCGCTTGCATTGTTTGCAGAGATGATGCTGTTTCAAGTCAGGCCGGATCAGTTTACCTTTAGTAGTTGCCTTTGTGCTTGTGCTAGTATAGCTTCGCTTAAGCATGGTAAACAAATTCATGCCTCTTTAATACGAAGTAATTTAAGACCCAACACGATTGTTGTGAGTTCTCTTATCGACATGTATTCCAAATGCGGCAGTTTGGGGGCCGGAAGGCAGGTTTTCAAGCTCATGGGTGATAAGCAAGACATCGTGTTATGGAACACAATGATGTCTGCCTTAGCACAACATGGTCATGGTATAGAGGCATTGCAGATGTTTGAAGACATGGTCAGTTCAGGTGTAAAGCCGGTTACGACCACCTTTGTTGTCATTCTCAATGCTTGTAGTCATTCTGGTCTAGTGCAGGAAGGGCGTAGGCTTTTCAAGGCAATGACTGATGATTATGGCATTGTTCCTAATGAGGAACATTATGCATGCTTAATTGATCTCTTGGGTCGAGCTGGATGTTTTGATGAGTTAATGAACGAACTCAAAAATATGCCACGTAAAGCTGGCGACCGGCTGCATCCTCTGAAAGAGGAAATATACTCAGTTTTGAAACAGTTAGCTGACCAGATGGAAGAAGATGCTTCAGTAACTGACGCCGAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

529

Amino Acids

59.25

Weight (kDa)

8.64

Isoelectric Point (pI)

48.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	130 - 159	1.3e-07	PPR repeat
PPR_2	PF13041	158 - 207	1.2e-06	PPR repeat family
PPR	PF01535	161 - 189	3.1e-06	PPR repeat
PPR	PF01535	263 - 291	7.9e-07	PPR repeat
PPR_2	PF13041	291 - 338	9.3e-11	PPR repeat family
PPR	PF01535	293 - 319	2.6e-08	PPR repeat
PPR_2	PF13041	393 - 440	4e-11	PPR repeat family
PPR	PF01535	395 - 425	7e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21090
fragaria_vesca	FvH4_1g26660
malus_domestica	MD05G1117900.v1.1 MD10G1120900.v1.1
prunus_persica	Prupe.8G162400_v2.0.a1
pyrus_communis	pycom05g11190 pycom10g10410 pycom10g10420
rosa_chinensis	RchiOBHm_Chr1g0323421 RchiOBHm_Chr1g0323511 RchiOBHm_Chr1g0323621 RchiOBHm_Chr1g0323681 RchiOBHm_Chr1g0323771
rosa_laevigata	RLG00000030297 RLG00000030299 RLG00000030300 RLG00000030302 RLG00000030317 RLG00000030324
rosa_multiflora	Rmu_sc0000252.1_g000001 Rmu_sc0000252.1_g000002 Rmu_sc0000252.1_g000009 Rmu_sc0000252.1_g000012 Rmu_sc0000252.1_g000023 Rmu_sc0000252.1_g000030 Rmu_sc0000804.1_g000006 Rmu_sc0002634.1_g000016 Rmu_sc0002634.1_g000019 Rmu_sc0008902.1_g000002 Rmu_sc0036879.1_g000001 Rmu_sc0036879.1_g000002
rosa_roxburghii	Rroxscaffold_4G00326420 Rroxscaffold_4G00326490 Rroxscaffold_4G00326520 Rroxscaffold_4G00326590
rosa_rugosa	Rorug01G0038100 Rorug01G0038200 Rorug01G0038300 Rorug01G0039100.1 Rorug01G0039200 Rorug01G0039500
rosa_samantha	Rh1AG055800 Rh1AG055900 Rh1AG056300 Rh1AG056400 Rh1AG056500 Rh1AG056700 Rh1BG047700 Rh1CG056700 Rh1CG058000 Rh1DG061800
rosa_wichuraiana	Rw1G004810 Rw1G004820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	641
AarI	CACCTGC	1 cut(s)	587
Acc36I	ACCTGC	3 cut(s)	587, 649, 1138
AccIII	TCCGGA	1 cut(s)	272
AciI	CCGC	3 cut(s)	333, 559, 1125
AclWI	GGATC	1 cut(s)	984
AcsI	RAATTY	2 cut(s)	382, 1044
AcuI	CTGAAG	2 cut(s)	455, 1548
AcyI	GRCGYC	1 cut(s)	1575
AfaI	GTAC	2 cut(s)	323, 389
AfeI	AGCGCT	1 cut(s)	933
AfiI	CCNNNNNNNGG	3 cut(s)	519, 520, 729
AflII	CTTAAG	1 cut(s)	1028
AflIII	ACRYGT	1 cut(s)	1110
AgsI	TTSAA	8 cut(s)	280, 328, 580, 965, 1156, 1253, 1357, 1531
AhdI	GACNNNNNGTC	1 cut(s)	226
AjnI	CCWGG	2 cut(s)	485, 746
AleI	CACNNNNGTG	1 cut(s)	497
Alw26I	GTCTC	2 cut(s)	145, 213
AlwI	GGATC	1 cut(s)	984
AlwNI	CAGNNNCTG	1 cut(s)	1571
Aor13HI	TCCGGA	1 cut(s)	272
Aor51HI	AGCGCT	1 cut(s)	933
AoxI	GGCC	4 cut(s)	121, 441, 971, 1137
ApeKI	GCWGC	2 cut(s)	208, 1495
ApoI	RAATTY	2 cut(s)	382, 1044
AspLEI	GCGC	1 cut(s)	934
AspS9I	GGNCC	4 cut(s)	228, 442, 792, 1137
AsuC2I	CCSGG	2 cut(s)	445, 875
AsuHPI	GGTGA	3 cut(s)	511, 836, 1178
AsuNHI	GCTAGC	1 cut(s)	839
AvaII	GGWCC	2 cut(s)	228, 792
BauI	CACGAG	1 cut(s)	391
BbsI	GAAGAC	1 cut(s)	1260
BbvCI	CCTCAGC	1 cut(s)	425
BbvI	GCAGC	2 cut(s)	220, 1482
BccI	CCATC	5 cut(s)	28, 107, 730, 760, 1543
BceAI	ACGGC	1 cut(s)	122
BcgI	CGANNNNNNTGC	2 cut(s)	673, 707
BciT130I	CCWGG	2 cut(s)	487, 748
BcnI	CCSGG	2 cut(s)	445, 875
BcoDI	GTCTC	2 cut(s)	145, 213
BfaI	CTAG	5 cut(s)	840, 909, 1014, 1331, 1585
BfmI	CTRYAG	1 cut(s)	206
BfoI	RGCGCY	1 cut(s)	935
BfrI	CTTAAG	1 cut(s)	1028
BfuAI	ACCTGC	3 cut(s)	587, 649, 1138
BisI	GCNGC	4 cut(s)	209, 334, 1126, 1496
BlsI	GCNGC	4 cut(s)	210, 335, 1127, 1497
Bme1390I	CCNGG	4 cut(s)	445, 487, 748, 875
Bme18I	GGWCC	2 cut(s)	228, 792
BmeRI	GACNNNNNGTC	1 cut(s)	226
BmgT120I	GGNCC	4 cut(s)	228, 442, 792, 1137
BmiI	GGNNCC	2 cut(s)	230, 1138
BmrFI	CCNGG	4 cut(s)	445, 487, 748, 875
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	7 cut(s)	337, 703, 733, 849, 945, 1507, 1549
BmtI	GCTAGC	1 cut(s)	843
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	1 cut(s)	1260
Bpu10I	CCTNAGC	2 cut(s)	425, 1210
BpuMI	CCSGG	2 cut(s)	445, 875
BsaAI	YACGTR	1 cut(s)	1478
BsaHI	GRCGYC	1 cut(s)	1575
BsaJI	CCNNGG	2 cut(s)	118, 495
BsaWI	WCCGGW	1 cut(s)	272
BsaXI	ACNNNNNCTCC	6 cut(s)	19, 42, 49, 72, 98, 128
Bsc4I	CCNNNNNNNGG	3 cut(s)	519, 520, 729
Bse118I	RCCGGY	3 cut(s)	568, 1279, 1491
Bse1I	ACTGG	2 cut(s)	523, 804
Bse3DI	GCAATG	2 cut(s)	1238, 1368
BseAI	TCCGGA	1 cut(s)	272
BseBI	CCWGG	2 cut(s)	487, 748
BseDI	CCNNGG	2 cut(s)	118, 495
BseGI	GGATG	9 cut(s)	99, 324, 481, 718, 748, 784, 864, 1442, 1498
BseLI	CCNNNNNNNGG	3 cut(s)	519, 520, 729
BseMI	GCAATG	2 cut(s)	1238, 1368
BseMII	CTCAG	5 cut(s)	247, 416, 459, 855, 1536
BseNI	ACTGG	2 cut(s)	523, 804
BseRI	GAGGAG	2 cut(s)	4, 47
BseXI	GCAGC	2 cut(s)	220, 1482
BseYI	CCCAGC	1 cut(s)	671
BsgI	GTGCAG	1 cut(s)	1355
Bsh1285I	CGRYCG	1 cut(s)	1492
BshFI	GGCC	4 cut(s)	123, 443, 973, 1139
BsiEI	CGRYCG	1 cut(s)	1492
BsiSI	CCGG	8 cut(s)	273, 445, 569, 875, 974, 1140, 1280, 1492
BslFI	GGGAC	2 cut(s)	130, 214
BslI	CCNNNNNNNGG	3 cut(s)	519, 520, 729
BsmAI	GTCTC	2 cut(s)	145, 213
BsmBI	CGTCTC	2 cut(s)	145, 213
BsmFI	GGGAC	2 cut(s)	130, 214
BsnI	GGCC	4 cut(s)	123, 443, 973, 1139
Bsp13I	TCCGGA	1 cut(s)	272
Bsp143I	GATC	3 cut(s)	853, 976, 1417
Bsp19I	CCATGG	1 cut(s)	495
BspACI	CCGC	3 cut(s)	333, 559, 1125
BspANI	GGCC	4 cut(s)	123, 443, 973, 1139
BspCNI	CTCAG	5 cut(s)	246, 417, 460, 856, 1535
BspEI	TCCGGA	1 cut(s)	272
BspLI	GGNNCC	2 cut(s)	230, 1138
BspMAI	CTGCAG	1 cut(s)	210
BspMI	ACCTGC	3 cut(s)	587, 649, 1138
BspOI	GCTAGC	1 cut(s)	843
BspPI	GGATC	1 cut(s)	984
BspTI	CTTAAG	1 cut(s)	1028
BsrDI	GCAATG	2 cut(s)	1238, 1368
BsrFI	RCCGGY	3 cut(s)	568, 1279, 1491
BsrI	ACTGG	2 cut(s)	523, 804
BssAI	RCCGGY	3 cut(s)	568, 1279, 1491
BssECI	CCNNGG	2 cut(s)	118, 495
BssMI	GATC	3 cut(s)	853, 976, 1417
BssNI	GRCGYC	1 cut(s)	1575
BssSI	CACGAG	1 cut(s)	391
BssT1I	CCWWGG	2 cut(s)	118, 495
Bst2BI	CACGAG	1 cut(s)	391
Bst2UI	CCWGG	2 cut(s)	487, 748
Bst4CI	ACNGT	3 cut(s)	215, 610, 1536
BstACI	GRCGYC	1 cut(s)	1575
BstAFI	CTTAAG	1 cut(s)	1028
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstBAI	YACGTR	1 cut(s)	1478
BstC8I	GCNNGC	7 cut(s)	179, 352, 648, 841, 936, 1408, 1486
BstDEI	CTNAG	6 cut(s)	233, 425, 468, 864, 1210, 1522
BstDSI	CCRYGG	1 cut(s)	495
BstF5I	GGATG	9 cut(s)	99, 324, 481, 718, 748, 784, 864, 1442, 1498
BstH2I	RGCGCY	1 cut(s)	935
BstHHI	GCGC	1 cut(s)	934
BstKTI	GATC	3 cut(s)	856, 979, 1420
BstMAI	GTCTC	2 cut(s)	145, 213
BstMBI	GATC	3 cut(s)	853, 976, 1417
BstMCI	CGRYCG	1 cut(s)	1492
BstMWI	GCNNNNNNNGC	8 cut(s)	76, 120, 565, 643, 931, 944, 1019, 1342
BstNI	CCWGG	2 cut(s)	487, 748
BstNSI	RCATGY	2 cut(s)	1114, 1410
BstSCI	CCNGG	4 cut(s)	443, 485, 746, 873
BstSFI	CTRYAG	1 cut(s)	206
BstV1I	GCAGC	2 cut(s)	220, 1482
BstV2I	GAAGAC	1 cut(s)	1260
BstXI	CCANNNNNNTGG	1 cut(s)	314
BsuRI	GGCC	4 cut(s)	123, 443, 973, 1139
BtgI	CCRYGG	1 cut(s)	495
BtgZI	GCGATG	1 cut(s)	351
BtsCI	GGATG	9 cut(s)	99, 324, 481, 718, 748, 784, 864, 1442, 1498
BtsIMutI	CAGTG	2 cut(s)	211, 797
BveI	ACCTGC	3 cut(s)	587, 649, 1138
Cac8I	GCNNGC	7 cut(s)	179, 352, 648, 841, 936, 1408, 1486
CaiI	CAGNNNCTG	1 cut(s)	1571
CfoI	GCGC	1 cut(s)	934
Cfr10I	RCCGGY	3 cut(s)	568, 1279, 1491
Cfr13I	GGNCC	4 cut(s)	228, 442, 792, 1137
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	2 cut(s)	322, 388
CspCI	CAANNNNNGTGG	2 cut(s)	1279, 1314
CviQI	GTAC	2 cut(s)	322, 388
DdeI	CTNAG	6 cut(s)	233, 425, 468, 864, 1210, 1522
DpnI	GATC	3 cut(s)	855, 978, 1419
DpnII	GATC	3 cut(s)	853, 976, 1417
DriI	GACNNNNNGTC	1 cut(s)	226
Eam1105I	GACNNNNNGTC	1 cut(s)	226
Eco130I	CCWWGG	2 cut(s)	118, 495
Eco47I	GGWCC	2 cut(s)	228, 792
Eco47III	AGCGCT	1 cut(s)	933
Eco57I	CTGAAG	2 cut(s)	455, 1548
EcoRII	CCWGG	2 cut(s)	485, 746
EcoT14I	CCWWGG	2 cut(s)	118, 495
EcoT22I	ATGCAT	1 cut(s)	1408
ErhI	CCWWGG	2 cut(s)	118, 495
Esp3I	CGTCTC	2 cut(s)	145, 213
FaqI	GGGAC	2 cut(s)	130, 214
Fnu4HI	GCNGC	4 cut(s)	209, 334, 1126, 1496
FokI	GGATG	9 cut(s)	86, 331, 488, 725, 755, 791, 871, 1449, 1485
Fsp4HI	GCNGC	4 cut(s)	209, 334, 1126, 1496
FspBI	CTAG	5 cut(s)	840, 909, 1014, 1331, 1585
GlaI	GCGC	1 cut(s)	933
GluI	GCNGC	4 cut(s)	209, 334, 1126, 1496
GsaI	CCCAGC	1 cut(s)	675
HaeII	RGCGCY	1 cut(s)	935
HaeIII	GGCC	4 cut(s)	123, 443, 973, 1139
HapII	CCGG	8 cut(s)	273, 445, 569, 875, 974, 1140, 1280, 1492
HgaI	GACGC	1 cut(s)	230
HhaI	GCGC	1 cut(s)	934
Hin1I	GRCGYC	1 cut(s)	1575
Hin6I	GCGC	1 cut(s)	932
HinP1I	GCGC	1 cut(s)	932
HinfI	GANTC	4 cut(s)	28, 190, 276, 430
HpaII	CCGG	8 cut(s)	273, 445, 569, 875, 974, 1140, 1280, 1492
HphI	GGTGA	3 cut(s)	511, 836, 1178
Hpy166II	GTNNAC	3 cut(s)	253, 984, 1040
Hpy188I	TCNGA	6 cut(s)	27, 164, 236, 435, 858, 1506
Hpy188III	TCNNGA	2 cut(s)	273, 807
Hpy8I	GTNNAC	3 cut(s)	253, 984, 1040
HpyAV	CCTTC	5 cut(s)	90, 233, 430, 1137, 1334
HpyCH4III	ACNGT	3 cut(s)	215, 610, 1536
HpyCH4IV	ACGT	1 cut(s)	1477
HpyCH4V	TGCA	9 cut(s)	208, 350, 596, 938, 947, 1243, 1336, 1406, 1498
HpyF10VI	GCNNNNNNNGC	8 cut(s)	76, 120, 565, 643, 931, 944, 1019, 1342
HpyF3I	CTNAG	6 cut(s)	233, 425, 468, 864, 1210, 1522
HpySE526I	ACGT	1 cut(s)	1477
Hsp92I	GRCGYC	1 cut(s)	1575
HspAI	GCGC	1 cut(s)	932
Kpn2I	TCCGGA	1 cut(s)	272
Kzo9I	GATC	3 cut(s)	853, 976, 1417
LmnI	GCTCC	3 cut(s)	119, 447, 634
Lsp1109I	GCAGC	2 cut(s)	220, 1482
LweI	GCATC	7 cut(s)	337, 703, 733, 849, 945, 1507, 1549
MaeI	CTAG	5 cut(s)	840, 909, 1014, 1331, 1585
MaeII	ACGT	1 cut(s)	1477
MaeIII	GTNAC	2 cut(s)	1282, 1567
MalI	GATC	3 cut(s)	855, 978, 1419
MboI	GATC	3 cut(s)	853, 976, 1417
MboII	GAAGA	5 cut(s)	631, 880, 1265, 1565, 1568
MluCI	AATT	4 cut(s)	382, 1044, 1069, 1413
MlyI	GAGTC	2 cut(s)	22, 184
Mph1103I	ATGCAT	1 cut(s)	1408
MroI	TCCGGA	1 cut(s)	272
MseI	TTAA	5 cut(s)	1029, 1058, 1073, 1412, 1451
MslI	CAYNNNNRTG	3 cut(s)	497, 1199, 1224
MspCI	CTTAAG	1 cut(s)	1028
MspI	CCGG	8 cut(s)	273, 445, 569, 875, 974, 1140, 1280, 1492
MspR9I	CCNGG	4 cut(s)	445, 487, 748, 875
MvaI	CCWGG	2 cut(s)	487, 748
MwoI	GCNNNNNNNGC	8 cut(s)	76, 120, 565, 643, 931, 944, 1019, 1342
NciI	CCSGG	2 cut(s)	445, 875
NcoI	CCATGG	1 cut(s)	495
NdeII	GATC	3 cut(s)	853, 976, 1417
NheI	GCTAGC	1 cut(s)	839
NlaIV	GGNNCC	2 cut(s)	230, 1138
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	2 cut(s)	1114, 1410
OliI	CACNNNNGTG	1 cut(s)	497
PaeI	GCATGC	1 cut(s)	1410
PaqCI	CACCTGC	1 cut(s)	587
PciI	ACATGT	1 cut(s)	1110
PfeI	GAWTC	2 cut(s)	276, 430
PflFI	GACNNNGTC	1 cut(s)	1259
PfoI	TCCNGGA	1 cut(s)	485
PkrI	GCNGC	4 cut(s)	210, 335, 1127, 1497
PleI	GAGTC	2 cut(s)	22, 184
PpsI	GAGTC	2 cut(s)	22, 184
Ppu21I	YACGTR	1 cut(s)	1478
PscI	ACATGT	1 cut(s)	1110
PsiI	TTATAA	1 cut(s)	641
Psp6I	CCWGG	2 cut(s)	485, 746
PspFI	CCCAGC	1 cut(s)	671
PspGI	CCWGG	2 cut(s)	485, 746
PspN4I	GGNNCC	2 cut(s)	230, 1138
PspPI	GGNCC	4 cut(s)	228, 442, 792, 1137
PstI	CTGCAG	1 cut(s)	210
PstNI	CAGNNNCTG	1 cut(s)	1571
PsyI	GACNNNGTC	1 cut(s)	1259
RsaI	GTAC	2 cut(s)	323, 389
RsaNI	GTAC	2 cut(s)	322, 388
RseI	CAYNNNNRTG	3 cut(s)	497, 1199, 1224
SaqAI	TTAA	5 cut(s)	1029, 1058, 1073, 1412, 1451
SatI	GCNGC	4 cut(s)	209, 334, 1126, 1496
Sau3AI	GATC	3 cut(s)	853, 976, 1417
Sau96I	GGNCC	4 cut(s)	228, 442, 792, 1137
SchI	GAGTC	2 cut(s)	22, 184
ScrFI	CCNGG	4 cut(s)	445, 487, 748, 875
SfaNI	GCATC	7 cut(s)	337, 703, 733, 849, 945, 1507, 1549
SfcI	CTRYAG	1 cut(s)	206
SinI	GGWCC	2 cut(s)	228, 792
SmiMI	CAYNNNNRTG	3 cut(s)	497, 1199, 1224
SmlI	CTYRAG	1 cut(s)	1028
SmoI	CTYRAG	1 cut(s)	1028
SphI	GCATGC	1 cut(s)	1410
Sse9I	AATT	4 cut(s)	382, 1044, 1069, 1413
SsiI	CCGC	3 cut(s)	333, 559, 1125
SspMI	CTAG	5 cut(s)	840, 909, 1014, 1331, 1585
StyD4I	CCNGG	4 cut(s)	443, 485, 746, 873
StyI	CCWWGG	2 cut(s)	118, 495
TaaI	ACNGT	3 cut(s)	215, 610, 1536
TaiI	ACGT	1 cut(s)	1480
TaqI	TCGA	5 cut(s)	150, 683, 698, 1107, 1429
TaqII	GACCGA	1 cut(s)	216
TasI	AATT	4 cut(s)	382, 1044, 1069, 1413
TatI	WGTACW	2 cut(s)	321, 387
TauI	GCSGC	2 cut(s)	336, 1128
TfiI	GAWTC	2 cut(s)	276, 430
Tru1I	TTAA	5 cut(s)	1029, 1058, 1073, 1412, 1451
Tru9I	TTAA	5 cut(s)	1029, 1058, 1073, 1412, 1451
TscAI	CASTG	2 cut(s)	218, 804
TseI	GCWGC	2 cut(s)	208, 1495
TspDTI	ATGAA	4 cut(s)	845, 942, 1037, 1469
TspRI	CASTG	2 cut(s)	218, 804
Tth111I	GACNNNGTC	1 cut(s)	1259
Vha464I	CTTAAG	1 cut(s)	1028
VpaK11BI	GGWCC	2 cut(s)	228, 792
XapI	RAATTY	2 cut(s)	382, 1044
XceI	RCATGY	2 cut(s)	1114, 1410
XspI	CTAG	5 cut(s)	840, 909, 1014, 1331, 1585
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.