Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001363

Physical Location & Seq

Genomic Coordinates Reverse (-)

6437663 .. 6441969

Gene Structure 4307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0039200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTGTGGACTTGTGTTCCGAATCTGGAGGTATATGTATCTTCACCGAAATATGACTCAGATGAACATGTGCGTCAAGCCGGGTTTGTTGATCGAGCGTAATGTTGTAGAACTTGAACTTGATCTTTATACCACACCCTCAAATTCCTACACAGGGTGTCTTAAGTTGCCTCCAAGCATTTTCATTTGCAAGACACTGGTAGTTTTGAAGCTGATACTAACAGATCATGTTATTGCTATCCCTCCTAACTCAAGTTGTTTTCCAAGTCTCAAGTACCTTGATGTTCAGGTATATTATCCTGTTGCTGTCGACTCAGTGGCAAAACTGTTTTCGTGTTGTTTCTCTGCACTTGAAGGTTTAATTATACATGGAAATCTCGGAAGACTTAGAGATGATGAAGTTTTGAACTTAACTATCCCTGCTCCTAAACTCAAAAGACTACAGATGAGATTCTGTGCTGTTCCAGAGGATGACCCTTATGCTAGGGATGGAGGGTATGAGTACAAAATTTTTGTTAAGGCTAATGCTCCAAACCTTGAAAAGTTCAATGTCAAGTACCTTTTGGCAAGCTATTCTTTGAAGAATGTAAAATCGCTAAGCACAGTTGAGCTTAAATTCAAAGGTCTGCATGCGGGAGAGAACATATATTTTCCTGATCGTATACATAAGCTCTTTGCAGAAATTGTGAATGTCAAATATTTGTCAATTTTAGCTTCAATTTTGGGGGATCCTGACATTGCATATCAATATCCTATGCCTAGGTTCAATAATTTGAACCAGTTGGAGCTACGTCTTCAAACTTGCTGCTCTTGGCAATCACTGCCAAGATGGGGGACTGATGAGAAGGCCATCATCTGCTTACTGGGTCATAGAAATGCAGCTCAAAGAAAAGAAATCAGGGTCGTTTATGAGCAACTTTATCAAGAAGATATTATCAAGCGCCTTGAGTCTGAGCTCTCTGGTGATTTTGAGAGAGCGGTGTACCGTTGGACATTGGATCCAGCTGATTGTGATGCTGTTTTGGCTAATCTGGCCATCAAGAAACCCGAGTGCAACTACAATGTCATCATCGAAATCTTCAGTGTTCGGTGTCCTGAAGAGCTTCTGGCTGTAACAAAAACTTACCAGCTTCGTTACAAGTGCTCTTTGGAAGAAGATCTAGCTCAACGTACCAATGGTGATATCCACAAGCTTTTGGTTGCTTTGGTGACTGCTTACCGCTGTGATGGTAACGAGATTAATGTAAAATTGGCAAATTCAGAAGCTAATATTCTTCAGGATGCTATCAAAGACGAGTGTTTTAATCATGAAGAAATTATTAGAATCCTGAGTACAGAGATGACCATGGCAACTCTATCAGCAAGGTCAGATAAGAACAGCATAGATAATTTCTTGGAGGATGGGGCTAATGATTTCCAGAAGGCATTGCATACTGCCGTTCGATGCCTCAATGACCACAAGAAGTGCTTTGAGAAGAAATTGGTACTTCGCAAGGCGATCATACGGACAGGGACCAATGAGGATGCTCTCACTCGTGTGATTGTTACAAGGGAAGAGAAGGACTTGAAGGACATCATGGAGGTTTACTACAAGAGGAACAGTGTTCCTCTTGAACAGGCTGTGGCCCAAGACACTTCAGGGGACTACAAGACCTTCCTCCTTAGTCCTTACTCTGTTGGGAAAGAACTAAGATCCTTCTCTGTGCAAATTCGATTCAAGTTTACCAAGTTTTATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

579

Amino Acids

66.48

Weight (kDa)

7.96

Isoelectric Point (pI)

39.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_At5g56370	PF24758	30 - 154	4.5e-06	FBD-associated F-box protein At5g56370, LRR repeats
Annexin	PF00191	274 - 327	1.5e-15	Annexin
Annexin	PF00191	338 - 402	8.4e-12	Annexin
Annexin	PF00191	495 - 554	1e-14	Annexin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21090
fragaria_vesca	FvH4_1g26660
malus_domestica	MD05G1117900.v1.1 MD10G1120900.v1.1
prunus_persica	Prupe.8G162400_v2.0.a1
pyrus_communis	pycom05g11190 pycom10g10410 pycom10g10420
rosa_chinensis	RchiOBHm_Chr1g0323421 RchiOBHm_Chr1g0323511 RchiOBHm_Chr1g0323621 RchiOBHm_Chr1g0323681 RchiOBHm_Chr1g0323771
rosa_laevigata	RLG00000030297 RLG00000030299 RLG00000030300 RLG00000030302 RLG00000030317 RLG00000030324
rosa_multiflora	Rmu_sc0000252.1_g000001 Rmu_sc0000252.1_g000002 Rmu_sc0000252.1_g000009 Rmu_sc0000252.1_g000012 Rmu_sc0000252.1_g000023 Rmu_sc0000252.1_g000030 Rmu_sc0000804.1_g000006 Rmu_sc0002634.1_g000016 Rmu_sc0002634.1_g000019 Rmu_sc0008902.1_g000002 Rmu_sc0036879.1_g000001 Rmu_sc0036879.1_g000002
rosa_roxburghii	Rroxscaffold_4G00326420 Rroxscaffold_4G00326490 Rroxscaffold_4G00326520 Rroxscaffold_4G00326590
rosa_rugosa	Rorug01G0038100 Rorug01G0038200 Rorug01G0038300 Rorug01G0039100.1 Rorug01G0039200 Rorug01G0039500
rosa_samantha	Rh1AG055800 Rh1AG055900 Rh1AG056300 Rh1AG056400 Rh1AG056500 Rh1AG056700 Rh1BG047700 Rh1CG056700 Rh1CG058000 Rh1DG061800
rosa_wichuraiana	Rw1G004810 Rw1G004820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	977
AccI	GTMKAC	2 cut(s)	309, 661
AciI	CCGC	3 cut(s)	632, 977, 1219
AclWI	GGATC	5 cut(s)	722, 735, 992, 1005, 1686
AcoI	YGGCCR	1 cut(s)	1032
AcsI	RAATTY	5 cut(s)	142, 507, 614, 1255, 1707
AcuI	CTGAAG	4 cut(s)	1063, 1116, 1259, 1620
AdeI	CACNNNGTG	1 cut(s)	156
AfaI	GTAC	7 cut(s)	275, 503, 557, 983, 1171, 1333, 1485
AfiI	CCNNNNNNNGG	2 cut(s)	153, 830
AflII	CTTAAG	1 cut(s)	161
AflIII	ACRYGT	1 cut(s)	66
AleI	CACNNNNGTG	1 cut(s)	1535
Alw21I	GWGCWC	2 cut(s)	957, 1145
Alw26I	GTCTC	1 cut(s)	272
AlwI	GGATC	5 cut(s)	722, 735, 992, 1005, 1686
Ama87I	CYCGRG	1 cut(s)	1046
AoxI	GGCC	3 cut(s)	846, 1032, 1623
ApeKI	GCWGC	2 cut(s)	804, 878
ApoI	RAATTY	5 cut(s)	142, 507, 614, 1255, 1707
AseI	ATTAAT	1 cut(s)	1239
Asp700I	GAANNNNTTC	1 cut(s)	1101
AspA2I	CCTAGG	1 cut(s)	758
AspLEI	GCGC	1 cut(s)	942
AspS9I	GGNCC	2 cut(s)	1512, 1624
AsuC2I	CCSGG	1 cut(s)	81
AsuHPI	GGTGA	4 cut(s)	35, 974, 1190, 1219
AvaI	CYCGRG	1 cut(s)	1046
AvaII	GGWCC	1 cut(s)	1512
AvrII	CCTAGG	1 cut(s)	758
BalI	TGGCCA	1 cut(s)	1034
BamHI	GGATCC	2 cut(s)	727, 997
BanII	GRGCYC	1 cut(s)	957
BauI	CACGAG	1 cut(s)	1533
BbsI	GAAGAC	2 cut(s)	388, 785
Bbv12I	GWGCWC	2 cut(s)	957, 1145
BbvI	GCAGC	2 cut(s)	791, 890
BccI	CCATC	6 cut(s)	482, 822, 857, 1043, 1220, 1394
BceAI	ACGGC	1 cut(s)	1421
BcnI	CCSGG	1 cut(s)	81
BcoDI	GTCTC	1 cut(s)	272
BfaI	CTAG	3 cut(s)	483, 759, 1160
BfmI	CTRYAG	1 cut(s)	440
BfoI	RGCGCY	1 cut(s)	943
BfrI	CTTAAG	1 cut(s)	161
BglII	AGATCT	1 cut(s)	1156
BisI	GCNGC	2 cut(s)	805, 879
BlnI	CCTAGG	1 cut(s)	758
BlpI	GCTNAGC	1 cut(s)	596
BlsI	GCNGC	2 cut(s)	806, 880
Bme1390I	CCNGG	1 cut(s)	81
Bme18I	GGWCC	1 cut(s)	1512
BmeT110I	CYCGRG	1 cut(s)	1046
BmgT120I	GGNCC	2 cut(s)	1512, 1624
BmiI	GGNNCC	3 cut(s)	729, 999, 1513
BmrFI	CCNGG	1 cut(s)	81
BmrI	ACTGGG	1 cut(s)	872
BmsI	GCATC	4 cut(s)	1003, 1270, 1433, 1513
BmuI	ACTGGG	1 cut(s)	872
BpiI	GAAGAC	2 cut(s)	388, 785
BpmI	CTGGAG	1 cut(s)	46
Bpu1102I	GCTNAGC	1 cut(s)	596
BpuEI	CTTGAG	3 cut(s)	235, 254, 965
BpuMI	CCSGG	1 cut(s)	81
BsaJI	CCNNGG	2 cut(s)	758, 1344
Bsc4I	CCNNNNNNNGG	2 cut(s)	153, 830
Bse1I	ACTGG	3 cut(s)	201, 778, 867
Bse3DI	GCAATG	2 cut(s)	735, 1424
BseDI	CCNNGG	2 cut(s)	758, 1344
BseGI	GGATG	5 cut(s)	475, 493, 1285, 1405, 1528
BseLI	CCNNNNNNNGG	2 cut(s)	153, 830
BseMI	GCAATG	2 cut(s)	735, 1424
BseMII	CTCAG	4 cut(s)	71, 327, 942, 1319
BseNI	ACTGG	3 cut(s)	201, 778, 867
BseXI	GCAGC	2 cut(s)	791, 890
BsgI	GTGCAG	1 cut(s)	330
BshFI	GGCC	3 cut(s)	848, 1034, 1625
BsiHKAI	GWGCWC	2 cut(s)	957, 1145
BsiHKCI	CYCGRG	1 cut(s)	1046
BsiSI	CCGG	1 cut(s)	80
BslFI	GGGAC	3 cut(s)	847, 1525, 1655
BslI	CCNNNNNNNGG	2 cut(s)	153, 830
BsmAI	GTCTC	1 cut(s)	272
BsmFI	GGGAC	3 cut(s)	847, 1525, 1655
BsnI	GGCC	3 cut(s)	848, 1034, 1625
BsoBI	CYCGRG	1 cut(s)	1046
Bsp1286I	GDGCHC	2 cut(s)	957, 1145
Bsp143I	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
Bsp1720I	GCTNAGC	1 cut(s)	596
Bsp19I	CCATGG	1 cut(s)	1344
BspACI	CCGC	3 cut(s)	632, 977, 1219
BspANI	GGCC	3 cut(s)	848, 1034, 1625
BspCNI	CTCAG	4 cut(s)	70, 326, 943, 1320
BspHI	TCATGA	1 cut(s)	1306
BspLI	GGNNCC	3 cut(s)	729, 999, 1513
BspPI	GGATC	5 cut(s)	722, 735, 992, 1005, 1686
BspQI	GCTCTTC	1 cut(s)	1092
BspTI	CTTAAG	1 cut(s)	161
BsrBI	CCGCTC	1 cut(s)	977
BsrDI	GCAATG	2 cut(s)	735, 1424
BsrI	ACTGG	3 cut(s)	201, 778, 867
BssECI	CCNNGG	2 cut(s)	758, 1344
BssMI	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
BssNAI	GTATAC	1 cut(s)	662
BssSI	CACGAG	1 cut(s)	1533
BssT1I	CCWWGG	2 cut(s)	758, 1344
Bst1107I	GTATAC	1 cut(s)	662
Bst2BI	CACGAG	1 cut(s)	1533
Bst4CI	ACNGT	4 cut(s)	327, 604, 986, 1601
Bst6I	CTCTTC	2 cut(s)	1092, 1548
BstAFI	CTTAAG	1 cut(s)	161
BstAPI	GCANNNNNTGC	1 cut(s)	820
BstC8I	GCNNGC	2 cut(s)	568, 630
BstDEI	CTNAG	8 cut(s)	57, 313, 386, 596, 951, 1328, 1661, 1688
BstDSI	CCRYGG	1 cut(s)	1344
BstF5I	GGATG	5 cut(s)	475, 493, 1285, 1405, 1528
BstH2I	RGCGCY	1 cut(s)	943
BstHHI	GCGC	1 cut(s)	942
BstKTI	GATC	9 cut(s)	93, 124, 226, 658, 730, 1000, 1159, 1500, 1694
BstMAI	GTCTC	1 cut(s)	272
BstMBI	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
BstMWI	GCNNNNNNNGC	3 cut(s)	820, 1022, 1031
BstNSI	RCATGY	2 cut(s)	70, 632
BstSCI	CCNGG	1 cut(s)	79
BstSFI	CTRYAG	1 cut(s)	440
BstV1I	GCAGC	2 cut(s)	791, 890
BstV2I	GAAGAC	2 cut(s)	388, 785
BstX2I	RGATCY	4 cut(s)	727, 997, 1156, 1691
BstYI	RGATCY	4 cut(s)	727, 997, 1156, 1691
BstZ17I	GTATAC	1 cut(s)	662
BsuRI	GGCC	3 cut(s)	848, 1034, 1625
BtgI	CCRYGG	1 cut(s)	1344
BtsCI	GGATG	5 cut(s)	475, 493, 1285, 1405, 1528
BtsI	GCAGTG	1 cut(s)	818
BtsIMutI	CAGTG	5 cut(s)	194, 321, 818, 1087, 1606
Cac8I	GCNNGC	2 cut(s)	568, 630
CciI	TCATGA	1 cut(s)	1306
CfoI	GCGC	1 cut(s)	942
Cfr13I	GGNCC	2 cut(s)	1512, 1624
CseI	GACGC	1 cut(s)	61
Csp6I	GTAC	7 cut(s)	274, 502, 556, 982, 1170, 1332, 1484
CviAII	CATG	7 cut(s)	67, 227, 368, 629, 1307, 1345, 1576
CviQI	GTAC	7 cut(s)	274, 502, 556, 982, 1170, 1332, 1484
DdeI	CTNAG	8 cut(s)	57, 313, 386, 596, 951, 1328, 1661, 1688
DpnI	GATC	9 cut(s)	92, 123, 225, 657, 729, 999, 1158, 1499, 1693
DpnII	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
DraIII	CACNNNGTG	1 cut(s)	156
EaeI	YGGCCR	1 cut(s)	1032
Eam1104I	CTCTTC	2 cut(s)	1092, 1548
EarI	CTCTTC	2 cut(s)	1092, 1548
Ecl136II	GAGCTC	1 cut(s)	955
Eco130I	CCWWGG	2 cut(s)	758, 1344
Eco24I	GRGCYC	1 cut(s)	957
Eco32I	GATATC	1 cut(s)	1183
Eco47I	GGWCC	1 cut(s)	1512
Eco53kI	GAGCTC	1 cut(s)	955
Eco57I	CTGAAG	4 cut(s)	1063, 1116, 1259, 1620
Eco88I	CYCGRG	1 cut(s)	1046
EcoICRI	GAGCTC	1 cut(s)	955
EcoRV	GATATC	1 cut(s)	1183
EcoT14I	CCWWGG	2 cut(s)	758, 1344
EcoT38I	GRGCYC	1 cut(s)	957
ErhI	CCWWGG	2 cut(s)	758, 1344
FaeI	CATG	7 cut(s)	70, 230, 371, 632, 1310, 1348, 1579
FalI	AAGNNNNNCTT	4 cut(s)	559, 591, 1451, 1483
FaqI	GGGAC	3 cut(s)	847, 1525, 1655
FatI	CATG	7 cut(s)	66, 226, 367, 628, 1306, 1344, 1575
FauI	CCCGC	1 cut(s)	625
FblI	GTMKAC	2 cut(s)	309, 661
Fnu4HI	GCNGC	2 cut(s)	805, 879
FokI	GGATG	5 cut(s)	482, 500, 1292, 1412, 1535
FriOI	GRGCYC	1 cut(s)	957
Fsp4HI	GCNGC	2 cut(s)	805, 879
FspBI	CTAG	3 cut(s)	483, 759, 1160
GlaI	GCGC	1 cut(s)	941
GluI	GCNGC	2 cut(s)	805, 879
GsuI	CTGGAG	1 cut(s)	46
HaeII	RGCGCY	1 cut(s)	943
HaeIII	GGCC	3 cut(s)	848, 1034, 1625
HapII	CCGG	1 cut(s)	80
HgaI	GACGC	1 cut(s)	61
HhaI	GCGC	1 cut(s)	942
Hin1II	CATG	7 cut(s)	70, 230, 371, 632, 1310, 1348, 1579
Hin6I	GCGC	1 cut(s)	940
HinP1I	GCGC	1 cut(s)	940
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	7 cut(s)	21, 55, 311, 450, 947, 1323, 1713
HpaII	CCGG	1 cut(s)	80
HphI	GGTGA	4 cut(s)	35, 974, 1190, 1219
Hpy166II	GTNNAC	6 cut(s)	8, 310, 662, 982, 1585, 1722
Hpy188I	TCNGA	6 cut(s)	20, 60, 380, 952, 1261, 1369
Hpy8I	GTNNAC	6 cut(s)	8, 310, 662, 982, 1585, 1722
HpyAV	CCTTC	7 cut(s)	347, 838, 1414, 1552, 1561, 1663, 1705
HpyCH4III	ACNGT	4 cut(s)	327, 604, 986, 1601
HpyCH4IV	ACGT	2 cut(s)	790, 1168
HpyCH4V	TGCA	9 cut(s)	189, 347, 628, 677, 740, 878, 1053, 1429, 1705
HpyF10VI	GCNNNNNNNGC	3 cut(s)	820, 1022, 1031
HpyF3I	CTNAG	8 cut(s)	57, 313, 386, 596, 951, 1328, 1661, 1688
HpySE526I	ACGT	2 cut(s)	790, 1168
Hsp92II	CATG	7 cut(s)	70, 230, 371, 632, 1310, 1348, 1579
HspAI	GCGC	1 cut(s)	940
Kzo9I	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
LguI	GCTCTTC	1 cut(s)	1092
LmnI	GCTCC	3 cut(s)	427, 532, 784
Lsp1109I	GCAGC	2 cut(s)	791, 890
LweI	GCATC	4 cut(s)	1003, 1270, 1433, 1513
MaeI	CTAG	3 cut(s)	483, 759, 1160
MaeII	ACGT	2 cut(s)	790, 1168
MaeIII	GTNAC	5 cut(s)	1111, 1133, 1207, 1229, 1543
MalI	GATC	9 cut(s)	92, 123, 225, 657, 729, 999, 1158, 1499, 1693
MbiI	CCGCTC	1 cut(s)	977
MboI	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
MflI	RGATCY	4 cut(s)	727, 997, 1156, 1691
MhlI	GDGCHC	2 cut(s)	957, 1145
MlsI	TGGCCA	1 cut(s)	1034
MluNI	TGGCCA	1 cut(s)	1034
MlyI	GAGTC	3 cut(s)	49, 305, 956
MmeI	TCCRAC	2 cut(s)	762, 968
Mox20I	TGGCCA	1 cut(s)	1034
MroXI	GAANNNNTTC	1 cut(s)	1101
MscI	TGGCCA	1 cut(s)	1034
MseI	TTAA	7 cut(s)	162, 359, 410, 516, 612, 1239, 1302
MslI	CAYNNNNRTG	2 cut(s)	873, 1535
Msp20I	TGGCCA	1 cut(s)	1034
MspA1I	CMGCKG	2 cut(s)	1004, 1221
MspCI	CTTAAG	1 cut(s)	161
MspI	CCGG	1 cut(s)	80
MspR9I	CCNGG	1 cut(s)	81
MwoI	GCNNNNNNNGC	3 cut(s)	820, 1022, 1031
NciI	CCSGG	1 cut(s)	81
NcoI	CCATGG	1 cut(s)	1344
NdeII	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
NlaIII	CATG	7 cut(s)	70, 230, 371, 632, 1310, 1348, 1579
NlaIV	GGNNCC	3 cut(s)	729, 999, 1513
NmuCI	GTSAC	1 cut(s)	1207
NspI	RCATGY	2 cut(s)	70, 632
OliI	CACNNNNGTG	1 cut(s)	1535
PaeI	GCATGC	1 cut(s)	632
PagI	TCATGA	1 cut(s)	1306
PciI	ACATGT	1 cut(s)	66
PciSI	GCTCTTC	1 cut(s)	1092
PdmI	GAANNNNTTC	1 cut(s)	1101
PfeI	GAWTC	4 cut(s)	21, 450, 1323, 1713
PkrI	GCNGC	2 cut(s)	806, 880
PleI	GAGTC	3 cut(s)	49, 305, 955
PpsI	GAGTC	3 cut(s)	49, 305, 955
PscI	ACATGT	1 cut(s)	66
PshBI	ATTAAT	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	957
PspN4I	GGNNCC	3 cut(s)	729, 999, 1513
PspPI	GGNCC	2 cut(s)	1512, 1624
PsuI	RGATCY	4 cut(s)	727, 997, 1156, 1691
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	7 cut(s)	275, 503, 557, 983, 1171, 1333, 1485
RsaNI	GTAC	7 cut(s)	274, 502, 556, 982, 1170, 1332, 1484
RseI	CAYNNNNRTG	2 cut(s)	873, 1535
SacI	GAGCTC	1 cut(s)	957
SalI	GTCGAC	1 cut(s)	308
SapI	GCTCTTC	1 cut(s)	1092
SaqAI	TTAA	7 cut(s)	162, 359, 410, 516, 612, 1239, 1302
SatI	GCNGC	2 cut(s)	805, 879
Sau3AI	GATC	9 cut(s)	90, 121, 223, 655, 727, 997, 1156, 1497, 1691
Sau96I	GGNCC	2 cut(s)	1512, 1624
SchI	GAGTC	3 cut(s)	49, 305, 956
ScrFI	CCNGG	1 cut(s)	81
SduI	GDGCHC	2 cut(s)	957, 1145
SfaNI	GCATC	4 cut(s)	1003, 1270, 1433, 1513
SfcI	CTRYAG	1 cut(s)	440
SinI	GGWCC	1 cut(s)	1512
SmiMI	CAYNNNNRTG	2 cut(s)	873, 1535
SmlI	CTYRAG	4 cut(s)	161, 250, 269, 944
SmoI	CTYRAG	4 cut(s)	161, 250, 269, 944
SphI	GCATGC	1 cut(s)	632
SsiI	CCGC	3 cut(s)	632, 977, 1219
SspI	AATATT	2 cut(s)	698, 1270
SspMI	CTAG	3 cut(s)	483, 759, 1160
SstI	GAGCTC	1 cut(s)	957
StyD4I	CCNGG	1 cut(s)	79
StyI	CCWWGG	2 cut(s)	758, 1344
TaaI	ACNGT	4 cut(s)	327, 604, 986, 1601
TaiI	ACGT	2 cut(s)	793, 1171
TaqI	TCGA	5 cut(s)	93, 309, 1071, 1441, 1711
TatI	WGTACW	2 cut(s)	501, 1331
TfiI	GAWTC	4 cut(s)	21, 450, 1323, 1713
Tru1I	TTAA	7 cut(s)	162, 359, 410, 516, 612, 1239, 1302
Tru9I	TTAA	7 cut(s)	162, 359, 410, 516, 612, 1239, 1302
TscAI	CASTG	5 cut(s)	201, 321, 825, 1087, 1606
TseFI	GTSAC	1 cut(s)	1207
TseI	GCWGC	2 cut(s)	804, 878
Tsp45I	GTSAC	1 cut(s)	1207
TspDTI	ATGAA	4 cut(s)	77, 172, 411, 1323
TspGWI	ACGGA	1 cut(s)	1519
TspRI	CASTG	5 cut(s)	201, 321, 825, 1087, 1606
Vha464I	CTTAAG	1 cut(s)	161
VpaK11BI	GGWCC	1 cut(s)	1512
VspI	ATTAAT	1 cut(s)	1239
XapI	RAATTY	5 cut(s)	142, 507, 614, 1255, 1707
XceI	RCATGY	2 cut(s)	70, 632
XmaJI	CCTAGG	1 cut(s)	758
XmiI	GTMKAC	2 cut(s)	309, 661
XmnI	GAANNNNTTC	1 cut(s)	1101
XspI	CTAG	3 cut(s)	483, 759, 1160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.