Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 390 |
| AciI | CCGC | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 325, 390 |
| AgsI | TTSAA | 4 cut(s) | 31, 80, 253, 289 |
| AjnI | CCWGG | 2 cut(s) | 67, 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 109, 141 |
| AluBI | AGCT | 3 cut(s) | 98, 125, 343 |
| AluI | AGCT | 3 cut(s) | 98, 125, 343 |
| AoxI | GGCC | 1 cut(s) | 309 |
| ApeKI | GCWGC | 1 cut(s) | 239 |
| BbvI | GCAGC | 1 cut(s) | 251 |
| BciT130I | CCWGG | 2 cut(s) | 69, 295 |
| BciVI | GTATCC | 1 cut(s) | 137 |
| BfuI | GTATCC | 1 cut(s) | 137 |
| BisI | GCNGC | 1 cut(s) | 240 |
| BlsI | GCNGC | 1 cut(s) | 241 |
| Bme1390I | CCNGG | 2 cut(s) | 69, 295 |
| BmiI | GGNNCC | 1 cut(s) | 66 |
| BmrFI | CCNGG | 2 cut(s) | 69, 295 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 85, 115 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 325, 390 |
| Bse3DI | GCAATG | 1 cut(s) | 267 |
| BseBI | CCWGG | 2 cut(s) | 69, 295 |
| BseGI | GGATG | 1 cut(s) | 303 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 325, 390 |
| BseMI | GCAATG | 1 cut(s) | 267 |
| BseXI | GCAGC | 1 cut(s) | 251 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| BshFI | GGCC | 1 cut(s) | 311 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 325, 390 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 311 |
| BspACI | CCGC | 1 cut(s) | 320 |
| BspANI | GGCC | 1 cut(s) | 311 |
| BspLI | GGNNCC | 1 cut(s) | 66 |
| BsrDI | GCAATG | 1 cut(s) | 267 |
| Bst2UI | CCWGG | 2 cut(s) | 69, 295 |
| Bst4CI | ACNGT | 2 cut(s) | 264, 377 |
| BstF5I | GGATG | 1 cut(s) | 303 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 95, 236 |
| BstNI | CCWGG | 2 cut(s) | 69, 295 |
| BstSCI | CCNGG | 2 cut(s) | 67, 293 |
| BstV1I | GCAGC | 1 cut(s) | 251 |
| BsuI | GTATCC | 1 cut(s) | 137 |
| BsuRI | GGCC | 1 cut(s) | 311 |
| BtsCI | GGATG | 1 cut(s) | 303 |
| CviAII | CATG | 4 cut(s) | 90, 280, 349, 385 |
| CviJI | RGCY | 6 cut(s) | 5, 34, 98, 125, 311, 343 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 34, 98, 125, 311, 343 |
| Eco147I | AGGCCT | 1 cut(s) | 311 |
| EcoRII | CCWGG | 2 cut(s) | 67, 293 |
| EcoT22I | ATGCAT | 1 cut(s) | 91 |
| FaeI | CATG | 4 cut(s) | 93, 283, 352, 388 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 4 cut(s) | 89, 279, 348, 384 |
| FauI | CCCGC | 1 cut(s) | 327 |
| Fnu4HI | GCNGC | 1 cut(s) | 240 |
| FokI | GGATG | 1 cut(s) | 310 |
| Fsp4HI | GCNGC | 1 cut(s) | 240 |
| GluI | GCNGC | 1 cut(s) | 240 |
| HaeIII | GGCC | 1 cut(s) | 311 |
| Hin1II | CATG | 4 cut(s) | 93, 283, 352, 388 |
| HindIII | AAGCTT | 2 cut(s) | 123, 341 |
| HinfI | GANTC | 2 cut(s) | 354, 363 |
| Hpy188III | TCNNGA | 2 cut(s) | 52, 367 |
| HpyAV | CCTTC | 2 cut(s) | 176, 259 |
| HpyCH4III | ACNGT | 2 cut(s) | 264, 377 |
| HpyCH4V | TGCA | 3 cut(s) | 89, 224, 272 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 95, 236 |
| Hsp92II | CATG | 4 cut(s) | 93, 283, 352, 388 |
| LpnPI | CCDG | 9 cut(s) | 37, 54, 81, 221, 280, 307, 311, 343, 352 |
| Lsp1109I | GCAGC | 1 cut(s) | 251 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MboII | GAAGA | 2 cut(s) | 200, 382 |
| MfeI | CAATTG | 1 cut(s) | 160 |
| MluCI | AATT | 5 cut(s) | 17, 106, 160, 231, 253 |
| MmeI | TCCRAC | 1 cut(s) | 282 |
| MnlI | CCTC | 1 cut(s) | 255 |
| Mph1103I | ATGCAT | 1 cut(s) | 91 |
| MseI | TTAA | 1 cut(s) | 314 |
| MspR9I | CCNGG | 2 cut(s) | 69, 295 |
| MunI | CAATTG | 1 cut(s) | 160 |
| MvaI | CCWGG | 2 cut(s) | 69, 295 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 95, 236 |
| NlaIII | CATG | 4 cut(s) | 93, 283, 352, 388 |
| NlaIV | GGNNCC | 1 cut(s) | 66 |
| NsiI | ATGCAT | 1 cut(s) | 91 |
| PceI | AGGCCT | 1 cut(s) | 311 |
| PfeI | GAWTC | 2 cut(s) | 354, 363 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 390 |
| PfoI | TCCNGGA | 1 cut(s) | 67 |
| PkrI | GCNGC | 1 cut(s) | 241 |
| Psp6I | CCWGG | 2 cut(s) | 67, 293 |
| PspGI | CCWGG | 2 cut(s) | 67, 293 |
| PspN4I | GGNNCC | 1 cut(s) | 66 |
| SaqAI | TTAA | 1 cut(s) | 314 |
| SatI | GCNGC | 1 cut(s) | 240 |
| ScrFI | CCNGG | 2 cut(s) | 69, 295 |
| SetI | ASST | 7 cut(s) | 66, 100, 127, 185, 247, 296, 345 |
| Sse9I | AATT | 5 cut(s) | 17, 106, 160, 231, 253 |
| SseBI | AGGCCT | 1 cut(s) | 311 |
| SsiI | CCGC | 1 cut(s) | 320 |
| StuI | AGGCCT | 1 cut(s) | 311 |
| StyD4I | CCNGG | 2 cut(s) | 67, 293 |
| TaaI | ACNGT | 2 cut(s) | 264, 377 |
| TaqI | TCGA | 2 cut(s) | 10, 259 |
| TasI | AATT | 5 cut(s) | 17, 106, 160, 231, 253 |
| TfiI | GAWTC | 2 cut(s) | 354, 363 |
| Tru1I | TTAA | 1 cut(s) | 314 |
| Tru9I | TTAA | 1 cut(s) | 314 |
| TseI | GCWGC | 1 cut(s) | 239 |
| TspDTI | ATGAA | 1 cut(s) | 201 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 390 |
| Zsp2I | ATGCAT | 1 cut(s) | 91 |