Rmu_sc0007104.1_g000004

Small subunit processome component 20 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007104.1
OG0003456
Physical Location & Seq
Forward (+)
34237 .. 37879
3643 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3006 bp
atgaatccttcaattccaacctttcagtcaccctcagtccccacttttgttcaaccccaaccccaatttacagatcccatacctccatcttctaattgttcaatgggtaactgtgagcccctagctccaatcacgagtaggatccgaaccatatcatcttcctcttcttcatcatctgacccacaaacccacgaagatacaataaacccatcttctctgccgccactttcgggtgtttcggtgcaacaggaggtccttcgctctaagccggctttctccgcctttatcgacaagctcgggaagctcgagatgctttgccagcctccctcagtcatcgacaccgaggaggtcagccttgcctcactgggccggaattccgatgaggaatgcaaaagcgacgacgccatcatccccaaaggcaccactaacggtgtcaacctcgccagcactcccgagctccaccccgaactcgtcagcctcaacactgctccgtcgattctgaacctcctcaaccatgacagcaccgacattgcaattgacaccgttcagttccttctgttgtctgattccgacgcgattactgacaaattggacaacaagccttctttgggttctaaagaccttggttcaaaggaagcaaccaaacttgttagtgaccataatgatatttttattgtgggctacactaagcctcctgatgatttcaaagttgatgatcacagttttgatttccacagaattttcattaaagcactgattgcgttctacttgaaatacattgatcagttgcccagccttggaaggtatgatgatagtcatgctaaagtttcgtctaccattttgaatgatgaaaattatatgtttgtgactgttgtgaatctatgcactgctttagtttttaagtactgtccaattggtatagttgaggtaccaaagaagtggtttttggatgcgacaagtatgaattctcatatcatagaagtgatgagttttgcttttgagttgctaatgcatcaacacatgtggttacgttgcatctcaagtcgtcttgtccacattgcttctgtaacagagtcttgctcaggaaattctgaaattccatttggcacttactatcctataaaacctaatgaacttttcatcatagctgtgtatctctactggcaattgaagacacaacgcattgatgatgtagccaacaatcttattacacaagctgcattcaatgacaaattggacattttccagtcaagttatttaagtggaggtattgtagtctcctctgatatgcgtgatttggatgatagtgctttcaatgataatgctgggaatttgcatcctgatgacgcatttgggaaaatggtaagggatgccaatttgtttcatgaatatatgaacatgcttgcgaaaatgcttttcaagagtggtagtaaggagcgggtgaatttaaatgttagtataatggatacaattgttgctgcattatgtggagagagcatcaagatggatgagcaatttggaacaatgattgttgctgctatcgacaaggctggacaaaaagctaagaaaaaacaagtggaggatattattgttgttggtatgactgccaaattgaatactgtgagtaatagcatgggcattagtacgggtaatagggagcctgagattcaaagcacggaaggggtgtctagtgtgatgtggaagaataatgctcaatcacatcatttccagcacactgactttggtaatggttcatctgttgggaacttacttctctattctgaggttcttacttccatggaagttgacaacggattcttgaatggtaattttctgcttttacctcttgagaacatgagtttgcttcttgctgataagtgggagataatggacaaaattgtgaaaatgatgtttgttgacaattgggagagatggaaatatttagtaattgcagcaaataagaatggtactaaagagttgcatatgaatctctttgaaaaccatatggagccgcatgagaagtgttcggggtatgctatgttaggtgttatagttgctgtgcctaccttggatgttcttcatataatgcagaagttgggattcaaacccaattatcacaatttccttcggttattctcaacttatgttagtgtgtttgttgtgagaaaagtatttacaagtttgaagttgttgcaaaatgagtatcaatataattcagtagatgtcaaggttgttgttgcaagtgcaattattcaattgcatttaattaaagctactgagttatacaagggaatggacaatcttgtgagagcttttgagatatgtgtatcatctaatgatttggccaaccatcattcctcaaatggtccacaagttttaattgagcagatcattgatattgaatttggtgtggatatgtacggagcaactatggtacattggctcgctaattatgatgcaggactcaattggcaaggagcaaaggaaaacagtacatggtttatcaaaatgcttggctttcatcattttagcactaacaaagtgctccagcaacacacttgtctgcagcatctgcaactggttattaggaaactcactcaggcagaaactcagatttatgaaggaagctgcattaatggatctgtcacaataacaaaagagaagcaactcaaagctatgctaattgacactagcttgggtaatgacttggatgatgaagcagggagactagctaaggtactgactgacatagatcaagcctctcaagcttggttatttgcgtggatgaccttttcacttgccccctttctgattcttggtgcactattgatatatgtcacacatgcaatgagtaccattgcttcatcatttgttcagctcggtattgaggttgacaagtacgtcaatgttcaacctttaacaggtattgctaagatcactggtatgagccatcgaattccacagtacaatgtctcttgtggaagttggaagacatttcaggcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DRIM

Protein Analysis

1001

Amino Acids

111.47

Weight (kDa)

5.43

Isoelectric Point (pI)

32.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTNNBL PF08216 146 - 192 4.7e-08 Catenin-beta-like, Arm-motif containing nuclear
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2900
Acc65I GGTACC 1 cut(s) 928
AccB1I GGYRCC 2 cut(s) 419, 928
AccBSI CCGCTC 1 cut(s) 1438
AccI GTMKAC 1 cut(s) 833
AccII CGCG 1 cut(s) 575
AciI CCGC 4 cut(s) 221, 279, 1438, 2012
AclWI GGATC 4 cut(s) 68, 136, 149, 2647
AcoI YGGCCR 1 cut(s) 2343
AcsI RAATTY 9 cut(s) 373, 738, 964, 1087, 1095, 1330, 1444, 2402, 2955
AcyI GRCGYC 1 cut(s) 402
AfiI CCNNNNNNNGG 4 cut(s) 230, 608, 797, 2921
AflIII ACRYGT 1 cut(s) 1020
AjuI GAANNNNNNNTTGG 4 cut(s) 929, 961, 1086, 1118
Alw21I GWGCWC 3 cut(s) 459, 2547, 2824
Alw26I GTCTC 3 cut(s) 1282, 2719, 2977
Alw44I GTGCAC 1 cut(s) 2820
AlwI GGATC 4 cut(s) 68, 136, 149, 2647
AlwNI CAGNNNCTG 1 cut(s) 2572
Ama87I CYCGRG 3 cut(s) 296, 305, 452
AoxI GGCC 2 cut(s) 367, 2343
ApaLI GTGCAC 1 cut(s) 2820
ApeKI GCWGC 6 cut(s) 1217, 1478, 1535, 1952, 2566, 2628
ApoI RAATTY 9 cut(s) 373, 738, 964, 1087, 1095, 1330, 1444, 2402, 2955
AseI ATTAAT 1 cut(s) 2634
Asp718I GGTACC 1 cut(s) 928
AspS9I GGNCC 3 cut(s) 253, 367, 2366
AsuHPI GGTGA 2 cut(s) 21, 1453
AvaI CYCGRG 3 cut(s) 296, 305, 452
AvaII GGWCC 2 cut(s) 253, 2366
BaeGI GKGCMC 1 cut(s) 2824
BaeI ACNNNNGTAYC 2 cut(s) 1458, 1491
BalI TGGCCA 1 cut(s) 2345
BamHI GGATCC 1 cut(s) 141
BanI GGYRCC 2 cut(s) 419, 928
BanII GRGCYC 2 cut(s) 120, 459
BarI GAAGNNNNNNTAC 2 cut(s) 2845, 2877
BauI CACGAG 1 cut(s) 133
BbsI GAAGAC 2 cut(s) 1178, 2996
Bbv12I GWGCWC 3 cut(s) 459, 2547, 2824
BbvI GCAGC 6 cut(s) 1204, 1465, 1522, 1964, 2578, 2615
BccI CCATC 7 cut(s) 94, 217, 413, 1498, 1926, 2358, 2958
BciVI GTATCC 1 cut(s) 1459
BclI TGATCA 2 cut(s) 715, 781
BcoDI GTCTC 3 cut(s) 1282, 2719, 2977
BfaI CTAG 4 cut(s) 122, 1689, 2691, 2729
BfmI CTRYAG 1 cut(s) 2564
BfuI GTATCC 1 cut(s) 1459
BisI GCNGC 8 cut(s) 221, 1218, 1479, 1536, 1953, 2012, 2567, 2629
BlsI GCNGC 8 cut(s) 222, 1219, 1480, 1537, 1954, 2013, 2568, 2630
BmcAI AGTACT 1 cut(s) 905
Bme18I GGWCC 2 cut(s) 253, 2366
BmeT110I CYCGRG 3 cut(s) 296, 305, 452
BmgT120I GGNCC 3 cut(s) 253, 367, 2366
BmiI GGNNCC 5 cut(s) 143, 421, 930, 1659, 2010
BmrI ACTGGG 1 cut(s) 374
BmsI GCATC 9 cut(s) 300, 940, 1021, 1044, 1345, 1360, 1506, 2446, 2578
BmuI ACTGGG 1 cut(s) 374
BpiI GAAGAC 2 cut(s) 1178, 2996
BplI GAGNNNNNCTC 2 cut(s) 1064, 1096
BpmI CTGGAG 1 cut(s) 2531
Bpu10I CCTNAGC 2 cut(s) 1081, 2733
BpuEI CTTGAG 3 cut(s) 1024, 1868, 2748
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 5 cut(s) 342, 622, 796, 1797, 2067
BsaXI ACNNNNNCTCC 4 cut(s) 676, 706, 1257, 1287
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 608, 797, 2921
Bse118I RCCGGY 1 cut(s) 268
Bse1I ACTGG 5 cut(s) 369, 1166, 1246, 2583, 2944
Bse3DI GCAATG 4 cut(s) 528, 1056, 2853, 2856
BseDI CCNNGG 5 cut(s) 342, 622, 796, 1797, 2067
BseGI GGATG 9 cut(s) 408, 955, 1306, 1336, 1375, 1513, 2077, 2716, 2790
BseLI CCNNNNNNNGG 4 cut(s) 230, 608, 797, 2921
BseMI GCAATG 4 cut(s) 528, 1056, 2853, 2856
BseMII CTCAG 8 cut(s) 48, 342, 1095, 1653, 1773, 2268, 2612, 2624
BseNI ACTGG 5 cut(s) 369, 1166, 1246, 2583, 2944
BseRI GAGGAG 3 cut(s) 359, 497, 1270
BseSI GKGCMC 1 cut(s) 2824
BseXI GCAGC 6 cut(s) 1204, 1465, 1522, 1964, 2578, 2615
BseYI CCCAGC 2 cut(s) 791, 1325
Bsh1236I CGCG 1 cut(s) 575
BshFI GGCC 2 cut(s) 369, 2345
BshNI GGYRCC 2 cut(s) 419, 928
BsiHKAI GWGCWC 3 cut(s) 459, 2547, 2824
BsiHKCI CYCGRG 3 cut(s) 296, 305, 452
BsiSI CCGG 2 cut(s) 269, 370
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 4 cut(s) 230, 608, 797, 2921
BsmAI GTCTC 3 cut(s) 1282, 2719, 2977
BsmFI GGGAC 1 cut(s) 23
BsmI GAATGC 2 cut(s) 392, 1220
BsnI GGCC 2 cut(s) 369, 2345
BsoBI CYCGRG 3 cut(s) 296, 305, 452
Bsp1286I GDGCHC 4 cut(s) 120, 459, 2547, 2824
Bsp143I GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
Bsp19I CCATGG 1 cut(s) 1797
BspACI CCGC 4 cut(s) 221, 279, 1438, 2012
BspANI GGCC 2 cut(s) 369, 2345
BspCNI CTCAG 8 cut(s) 47, 341, 1094, 1654, 1774, 2269, 2611, 2623
BspFNI CGCG 1 cut(s) 575
BspHI TCATGA 1 cut(s) 1384
BspLI GGNNCC 5 cut(s) 143, 421, 930, 1659, 2010
BspMAI CTGCAG 1 cut(s) 2568
BspPI GGATC 4 cut(s) 68, 136, 149, 2647
BspT107I GGYRCC 2 cut(s) 419, 928
BsrBI CCGCTC 1 cut(s) 1438
BsrDI GCAATG 4 cut(s) 528, 1056, 2853, 2856
BsrFI RCCGGY 1 cut(s) 268
BsrI ACTGG 5 cut(s) 369, 1166, 1246, 2583, 2944
BssAI RCCGGY 1 cut(s) 268
BssECI CCNNGG 5 cut(s) 342, 622, 796, 1797, 2067
BssMI GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
BssNI GRCGYC 1 cut(s) 402
BssSI CACGAG 1 cut(s) 133
BssT1I CCWWGG 4 cut(s) 622, 796, 1797, 2067
Bst2BI CACGAG 1 cut(s) 133
Bst4CI ACNGT 9 cut(s) 113, 431, 544, 722, 871, 908, 1621, 2492, 2964
Bst6I CTCTTC 1 cut(s) 169
BstACI GRCGYC 1 cut(s) 402
BstAPI GCANNNNNTGC 2 cut(s) 758, 2572
BstC8I GCNNGC 5 cut(s) 270, 320, 445, 1404, 2445
BstDSI CCRYGG 1 cut(s) 1797
BstENI CCTNNNNNAGG 1 cut(s) 2919
BstF5I GGATG 9 cut(s) 408, 955, 1306, 1336, 1375, 1513, 2077, 2716, 2790
BstFNI CGCG 1 cut(s) 575
BstKTI GATC 8 cut(s) 76, 144, 718, 784, 2391, 2642, 2755, 2937
BstMAI GTCTC 3 cut(s) 1282, 2719, 2977
BstMBI GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
BstMWI GCNNNNNNNGC 7 cut(s) 278, 301, 310, 319, 758, 2572, 2765
BstNSI RCATGY 3 cut(s) 1024, 1402, 2846
BstSFI CTRYAG 1 cut(s) 2564
BstSLI GKGCMC 1 cut(s) 2824
BstUI CGCG 1 cut(s) 575
BstV1I GCAGC 6 cut(s) 1204, 1465, 1522, 1964, 2578, 2615
BstV2I GAAGAC 2 cut(s) 1178, 2996
BstX2I RGATCY 3 cut(s) 73, 141, 2639
BstXI CCANNNNNNTGG 1 cut(s) 939
BstYI RGATCY 3 cut(s) 73, 141, 2639
BsuI GTATCC 1 cut(s) 1459
BsuRI GGCC 2 cut(s) 369, 2345
BtgI CCRYGG 1 cut(s) 1797
BtsCI GGATG 9 cut(s) 408, 955, 1306, 1336, 1375, 1513, 2077, 2716, 2790
BtsI GCAGTG 2 cut(s) 483, 885
BtsIMutI CAGTG 6 cut(s) 362, 483, 752, 885, 1734, 2937
Cac8I GCNNGC 5 cut(s) 270, 320, 445, 1404, 2445
CaiI CAGNNNCTG 1 cut(s) 2572
CciI TCATGA 1 cut(s) 1384
Cfr10I RCCGGY 1 cut(s) 268
Cfr13I GGNCC 3 cut(s) 253, 367, 2366
CseI GACGC 3 cut(s) 410, 581, 1355
CspCI CAANNNNNGTGG 2 cut(s) 1004, 1039
DpnI GATC 8 cut(s) 75, 143, 717, 783, 2390, 2641, 2754, 2936
DpnII GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
DraI TTTAAA 1 cut(s) 1449
DrdI GACNNNNNNGTC 1 cut(s) 2900
DseDI GACNNNNNNGTC 1 cut(s) 2900
EaeI YGGCCR 1 cut(s) 2343
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
EciI GGCGGA 1 cut(s) 268
Ecl136II GAGCTC 1 cut(s) 457
Eco130I CCWWGG 4 cut(s) 622, 796, 1797, 2067
Eco24I GRGCYC 2 cut(s) 120, 459
Eco47I GGWCC 2 cut(s) 253, 2366
Eco53kI GAGCTC 1 cut(s) 457
Eco88I CYCGRG 3 cut(s) 296, 305, 452
EcoICRI GAGCTC 1 cut(s) 457
EcoNI CCTNNNNNAGG 1 cut(s) 2919
EcoO109I RGGNCCY 1 cut(s) 253
EcoRI GAATTC 3 cut(s) 373, 964, 2955
EcoT14I CCWWGG 4 cut(s) 622, 796, 1797, 2067
EcoT22I ATGCAT 1 cut(s) 1014
EcoT38I GRGCYC 2 cut(s) 120, 459
ErhI CCWWGG 4 cut(s) 622, 796, 1797, 2067
FaqI GGGAC 1 cut(s) 23
FauI CCCGC 1 cut(s) 1431
FauNDI CATATG 2 cut(s) 1983, 2004
FbaI TGATCA 2 cut(s) 715, 781
FblI GTMKAC 1 cut(s) 833
Fnu4HI GCNGC 8 cut(s) 221, 1218, 1479, 1536, 1953, 2012, 2567, 2629
FokI GGATG 9 cut(s) 395, 962, 1313, 1323, 1382, 1520, 2084, 2723, 2797
FriOI GRGCYC 2 cut(s) 120, 459
Fsp4HI GCNGC 8 cut(s) 221, 1218, 1479, 1536, 1953, 2012, 2567, 2629
FspBI CTAG 4 cut(s) 122, 1689, 2691, 2729
GluI GCNGC 8 cut(s) 221, 1218, 1479, 1536, 1953, 2012, 2567, 2629
GsaI CCCAGC 2 cut(s) 795, 1329
GsuI CTGGAG 1 cut(s) 2531
HaeIII GGCC 2 cut(s) 369, 2345
HapII CCGG 2 cut(s) 269, 370
HgaI GACGC 3 cut(s) 410, 581, 1355
Hin1I GRCGYC 1 cut(s) 402
HincII GTYRAC 4 cut(s) 436, 1807, 1918, 2893
HindII GTYRAC 4 cut(s) 436, 1807, 1918, 2893
HindIII AAGCTT 1 cut(s) 2766
HpaII CCGG 2 cut(s) 269, 370
HphI GGTGA 2 cut(s) 21, 1453
Hpy166II GTNNAC 8 cut(s) 436, 834, 1054, 1807, 1918, 2369, 2822, 2893
Hpy8I GTNNAC 8 cut(s) 436, 834, 1054, 1807, 1918, 2369, 2822, 2893
Hpy99I CGWCG 4 cut(s) 401, 404, 496, 575
HpyAV CCTTC 8 cut(s) 18, 266, 563, 612, 795, 1673, 2135, 2615
HpyCH4III ACNGT 9 cut(s) 113, 431, 544, 722, 871, 908, 1621, 2492, 2964
HpyCH4IV ACGT 2 cut(s) 1030, 2901
HpyF10VI GCNNNNNNNGC 7 cut(s) 278, 301, 310, 319, 758, 2572, 2765
HpySE526I ACGT 2 cut(s) 1030, 2901
Hsp92I GRCGYC 1 cut(s) 402
KpnI GGTACC 1 cut(s) 932
KroI GCCGGC 1 cut(s) 268
KroNI GCCGGC 1 cut(s) 270
Ksp22I TGATCA 2 cut(s) 715, 781
Kzo9I GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
LmnI GCTCC 9 cut(s) 130, 462, 493, 1435, 1657, 2008, 2423, 2477, 2550
Lsp1109I GCAGC 6 cut(s) 1204, 1465, 1522, 1964, 2578, 2615
LweI GCATC 9 cut(s) 300, 940, 1021, 1044, 1345, 1360, 1506, 2446, 2578
MaeI CTAG 4 cut(s) 122, 1689, 2691, 2729
MaeII ACGT 2 cut(s) 1030, 2901
MaeIII GTNAC 8 cut(s) 27, 107, 653, 865, 1026, 1066, 2644, 2836
MalI GATC 8 cut(s) 75, 143, 717, 783, 2390, 2641, 2754, 2936
MbiI CCGCTC 1 cut(s) 1438
MboI GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
MfeI CAATTG 7 cut(s) 534, 912, 1166, 1470, 1921, 2255, 2467
MflI RGATCY 3 cut(s) 73, 141, 2639
MhlI GDGCHC 4 cut(s) 120, 459, 2547, 2824
MlsI TGGCCA 1 cut(s) 2345
MluNI TGGCCA 1 cut(s) 2345
MlyI GAGTC 2 cut(s) 1082, 2457
MmeI TCCRAC 3 cut(s) 41, 594, 2966
Mox20I TGGCCA 1 cut(s) 2345
Mph1103I ATGCAT 1 cut(s) 1014
MroNI GCCGGC 1 cut(s) 268
MscI TGGCCA 1 cut(s) 2345
MseI TTAA 9 cut(s) 747, 900, 1259, 1448, 2264, 2268, 2378, 2634, 2918
MslI CAYNNNNRTG 5 cut(s) 980, 1148, 1341, 1502, 2942
Msp20I TGGCCA 1 cut(s) 2345
MspI CCGG 2 cut(s) 269, 370
MunI CAATTG 7 cut(s) 534, 912, 1166, 1470, 1921, 2255, 2467
Mva1269I GAATGC 2 cut(s) 392, 1220
MvnI CGCG 1 cut(s) 575
MwoI GCNNNNNNNGC 7 cut(s) 278, 301, 310, 319, 758, 2572, 2765
NaeI GCCGGC 1 cut(s) 270
NcoI CCATGG 1 cut(s) 1797
NdeI CATATG 2 cut(s) 1983, 2004
NdeII GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
NgoMIV GCCGGC 1 cut(s) 268
NlaIV GGNNCC 5 cut(s) 143, 421, 930, 1659, 2010
NmuCI GTSAC 5 cut(s) 27, 653, 865, 2644, 2836
NsiI ATGCAT 1 cut(s) 1014
NspI RCATGY 3 cut(s) 1024, 1402, 2846
PacI TTAATTAA 1 cut(s) 2268
PaeR7I CTCGAG 1 cut(s) 305
PagI TCATGA 1 cut(s) 1384
PciI ACATGT 1 cut(s) 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PctI GAATGC 2 cut(s) 392, 1220
PdiI GCCGGC 1 cut(s) 270
PfeI GAWTC 9 cut(s) 4, 496, 566, 877, 1666, 1815, 1987, 2100, 2812
PkrI GCNGC 8 cut(s) 222, 1219, 1480, 1537, 1954, 2013, 2568, 2630
PleI GAGTC 2 cut(s) 1081, 2457
PpsI GAGTC 2 cut(s) 1081, 2457
PpuMI RGGWCCY 1 cut(s) 253
PscI ACATGT 1 cut(s) 1020
PshBI ATTAAT 1 cut(s) 2634
Psp124BI GAGCTC 1 cut(s) 459
Psp5II RGGWCCY 1 cut(s) 253
PspFI CCCAGC 2 cut(s) 791, 1325
PspN4I GGNNCC 5 cut(s) 143, 421, 930, 1659, 2010
PspPI GGNCC 3 cut(s) 253, 367, 2366
PspPPI RGGWCCY 1 cut(s) 253
PstI CTGCAG 1 cut(s) 2568
PstNI CAGNNNCTG 1 cut(s) 2572
PsuI RGATCY 3 cut(s) 73, 141, 2639
RseI CAYNNNNRTG 5 cut(s) 980, 1148, 1341, 1502, 2942
SacI GAGCTC 1 cut(s) 459
SaqAI TTAA 9 cut(s) 747, 900, 1259, 1448, 2264, 2268, 2378, 2634, 2918
SatI GCNGC 8 cut(s) 221, 1218, 1479, 1536, 1953, 2012, 2567, 2629
Sau3AI GATC 8 cut(s) 73, 141, 715, 781, 2388, 2639, 2752, 2934
Sau96I GGNCC 3 cut(s) 253, 367, 2366
ScaI AGTACT 1 cut(s) 905
SchI GAGTC 2 cut(s) 1082, 2457
SduI GDGCHC 4 cut(s) 120, 459, 2547, 2824
SfaNI GCATC 9 cut(s) 300, 940, 1021, 1044, 1345, 1360, 1506, 2446, 2578
SfcI CTRYAG 1 cut(s) 2564
Sfr274I CTCGAG 1 cut(s) 305
SinI GGWCC 2 cut(s) 253, 2366
SlaI CTCGAG 1 cut(s) 305
SmiI ATTTAAAT 1 cut(s) 1449
SmiMI CAYNNNNRTG 5 cut(s) 980, 1148, 1341, 1502, 2942
SmlI CTYRAG 4 cut(s) 305, 1039, 1847, 2763
SmoI CTYRAG 4 cut(s) 305, 1039, 1847, 2763
SsiI CCGC 4 cut(s) 221, 279, 1438, 2012
SspI AATATT 1 cut(s) 1940
SspMI CTAG 4 cut(s) 122, 1689, 2691, 2729
SstI GAGCTC 1 cut(s) 459
StyI CCWWGG 4 cut(s) 622, 796, 1797, 2067
SwaI ATTTAAAT 1 cut(s) 1449
TaaI ACNGT 9 cut(s) 113, 431, 544, 722, 871, 908, 1621, 2492, 2964
TaiI ACGT 2 cut(s) 1033, 2904
TaqI TCGA 6 cut(s) 288, 306, 336, 494, 1542, 2953
TatI WGTACW 3 cut(s) 903, 2492, 2964
TauI GCSGC 2 cut(s) 223, 2014
TfiI GAWTC 9 cut(s) 4, 496, 566, 877, 1666, 1815, 1987, 2100, 2812
Tru1I TTAA 9 cut(s) 747, 900, 1259, 1448, 2264, 2268, 2378, 2634, 2918
Tru9I TTAA 9 cut(s) 747, 900, 1259, 1448, 2264, 2268, 2378, 2634, 2918
TscAI CASTG 6 cut(s) 369, 490, 759, 892, 1741, 2944
TseFI GTSAC 5 cut(s) 27, 653, 865, 2644, 2836
TseI GCWGC 6 cut(s) 1217, 1478, 1535, 1952, 2566, 2628
Tsp45I GTSAC 5 cut(s) 27, 653, 865, 2644, 2836
TspGWI ACGGA 4 cut(s) 480, 1691, 1827, 2436
TspRI CASTG 6 cut(s) 369, 490, 759, 892, 1741, 2944
VneI GTGCAC 1 cut(s) 2820
VpaK11BI GGWCC 2 cut(s) 253, 2366
VspI ATTAAT 1 cut(s) 2634
XagI CCTNNNNNAGG 1 cut(s) 2919
XapI RAATTY 9 cut(s) 373, 738, 964, 1087, 1095, 1330, 1444, 2402, 2955
XceI RCATGY 3 cut(s) 1024, 1402, 2846
XhoI CTCGAG 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 833
XspI CTAG 4 cut(s) 122, 1689, 2691, 2729
ZrmI AGTACT 1 cut(s) 905
Zsp2I ATGCAT 1 cut(s) 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.