Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000395.1

Orthogroup ID

OG0001640

Physical Location & Seq

Genomic Coordinates Forward (+)

70691 .. 77208

Gene Structure 6518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000395.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

atgaaaaggagaggagtgaatcgagggtttccagtcatcattctcatcttcgtggctccaatcccagcgactcccgccatcttctccaccggcaccgttgcttccattaccgccagaaaacaaaacgtcgggccttccgttccaattggaaaacgcattacctcatcggacatgagtgatgaggagccaagaaatcgagggaattgcatagatttattcaagcgtttcttgatatatcggacacggcctcgtcgttgttcgccgccctctgggcctcggcgtattgggtccagtatttcgagactgtggggaacacgtcatcaggagctgcttgtagatcggcgccgcctccaagatcggcaaatgatgggtctgattggcctgatgactggccattgtattggggattatggtgaggtagaggtgggttcagggatctctactgtgttgatgatgccatcggattataatcgcttcctcaacgtgcctccaaggcgcttaggccccatctccttcccccaacgcgaatatgagcaaccgagtcatttcaatgtggaccgactccgccgctcaagaactcgctccggaacgatgtcgtttgctgctccaccggaaaacgacaccgaatctctcagacgcagccgtattctatccagcaagctctacctcgacgtcccgagctccaaggtaaacccagcatctaaattcgtctgtgctttcaagtttacgtttcggaatctgagaaatttcgccgatcaggtgccgttgatttactcttcgacgtatgatatcgcatttctcggcattgagaagctgcacccgttcgattcggttaaatggggtcggatatgtagattcctgtccatggatgatgttgtggacaaaaattgcattgtagagccaaaggaagctacaaacgaggatcttcttgtggtgcatacagaagcatacttgaacagtctaaagaaaagtgcagatgttgctatgataattgaggtacctcctgttgccctatttccgaattgccttgtgcagcataaagttctcagtccatttcgcaaccaggtggggggaactatcttggctgccaagcttgcaaaagaacgaggatgggccatcaatgtgggaggagggtttcatcattgttgtgggggaaaaggaggtggattctgtgcttatgctgatatttctctttgcatacattttgcctttgtgcggttaaacatatcaagggtgatgattattgatcttgatgcacatcaaggaaatggccatgaaacagattttgccaatgacagtcgagtctatatcctggatatgtacaaccctggaatatttccatttgattatgaagcaaggagattcattgatcagagggttgaagtagcgagtggcactacaacagccgagtacttgagaaagttagatgaagctcttgaggttgctgctcataattttgctcctgagttgatagtctacaatgctggaactgatattctagatggcgatcctctgggcaggttgaagatcagtcctgatgggataactcatagggatgagaaagtcttcaggtttgctcttgagaggaatattcccattgtcatgctcacatcaggtgcgatcactttgtcctctgctagtcgtatggatccttatgttgcggtgaaatacaaaaaccaagagcgcaggaccagcgtggccagaggacaaggtggcaatccggtgtggaatgagagattaatattcagggtagagtatccagggtccggcgagcagtataagctcacccttaaaataatggataaggacaccttcactgctgatgacaccataggcgaagcaacgatctatgttaaggagttattggaactgggtgtggagaatggatcagctgaattacatcctaagaaatatagtgtggttgctgcagataaaagtttccgtggagaaattcaagttggtgtaactttcaccaagaaggcagaacaggaatatggaggacaagaatttggaggatggaagcatagtgaatcatattcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko05034 ko05165 ko05203 map05034 map05165 map05203

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

680

Amino Acids

76.14

Weight (kDa)

9.03

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001640)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26040 AT5G26040
fragaria_vesca	FvH4_2g32010 FvH4_2g32010 FvH4_2g32010
malus_domestica	MD08G1043300.v1.1
prunus_persica	Prupe.1G413100_v2.0.a1 Prupe.1G413100_v2.0.a1
pyrus_communis	pycom08g03470
rosa_chinensis	RchiOBHm_Chr4g0398391 RchiOBHm_Chr5g0028711 RchiOBHm_Chr5g0034671 RchiOBHm_Chr5g0034681 RchiOBHm_Chr6g0269961 RchiOBHm_Chr6g0269981 RchiOBHm_Chr6g0310741
rosa_laevigata	RLG00000009592 RLG00000010461 RLG00000021179 RLG00000021847 RLG00000023632 RLG00000033108 RLG00000035916
rosa_multiflora	Rmu_sc0003720.1_g000019 Rmu_sc0003880.1_g000030 Rmu_sc0004094.1_g000044 Rmu_sc0004688.1_g000027 Rmu_ssc0000395.1_g000018
rosa_roxburghii	Rroxscaffold_1G00020030 Rroxscaffold_5G00363390 Rroxscaffold_7G00158280 Rroxscaffold_7G00164280
rosa_rugosa	Rorug05G0438800 Rorug06G0382900
rosa_samantha	Rh1CG016400 Rh2AG291700 Rh2DG220400 Rh2DG316200 Rh4AG321000 Rh4BG118000 Rh5AG451500 Rh6AG496700 Rh6BG175500 Rh6BG506600 Rh6DG498000
rosa_wichuraiana	Rw2G034110 Rw4G007180 Rw6G043220 Rw7G037690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	468
AasI	GACNNNNNNGTC	1 cut(s)	1301
AatII	GACGTC	1 cut(s)	675
Acc36I	ACCTGC	1 cut(s)	1509
Acc65I	GGTACC	1 cut(s)	997
AccB1I	GGYRCC	4 cut(s)	92, 342, 760, 997
AccBSI	CCGCTC	1 cut(s)	570
AccI	GTMKAC	1 cut(s)	1476
AccII	CGCG	1 cut(s)	525
AccIII	TCCGGA	1 cut(s)	584
AciI	CCGC	8 cut(s)	75, 111, 263, 346, 565, 568, 1216, 1661
AclWI	GGATC	6 cut(s)	443, 930, 1502, 1643, 1656, 1894
AcoI	YGGCCR	3 cut(s)	391, 1270, 1698
AcsI	RAATTY	4 cut(s)	704, 745, 1950, 2006
AcuI	CTGAAG	1 cut(s)	1552
AcyI	GRCGYC	2 cut(s)	343, 672
AfaI	GTAC	3 cut(s)	999, 1322, 1412
AfiI	CCNNNNNNNGG	5 cut(s)	269, 865, 1069, 1215, 1766
AflIII	ACRYGT	1 cut(s)	314
AgsI	TTSAA	7 cut(s)	220, 550, 721, 955, 1382, 1525, 1955
AjiI	CACGTC	1 cut(s)	317
AjnI	CCWGG	4 cut(s)	1062, 1311, 1327, 1759
AjuI	GAANNNNNNNTTGG	2 cut(s)	1941, 1973
AluBI	AGCT	9 cut(s)	328, 661, 681, 814, 911, 1093, 1433, 1783, 1892
AluI	AGCT	9 cut(s)	328, 661, 681, 814, 911, 1093, 1433, 1783, 1892
Alw21I	GWGCWC	1 cut(s)	683
Alw26I	GTCTC	1 cut(s)	295
AlwI	GGATC	6 cut(s)	443, 930, 1502, 1643, 1656, 1894
AlwNI	CAGNNNCTG	1 cut(s)	328
Ama87I	CYCGRG	1 cut(s)	676
Aor13HI	TCCGGA	1 cut(s)	584
AoxI	GGCC	9 cut(s)	131, 245, 272, 379, 391, 502, 1113, 1270, 1698
ApeKI	GCWGC	8 cut(s)	328, 602, 639, 814, 1033, 1085, 1445, 1925
ApoI	RAATTY	4 cut(s)	704, 745, 1950, 2006
ArsI	GACNNNNNNTTYG	2 cut(s)	355, 387
AseI	ATTAAT	1 cut(s)	1739
Asp700I	GAANNNNTTC	1 cut(s)	1565
Asp718I	GGTACC	1 cut(s)	997
AspLEI	GCGC	3 cut(s)	345, 498, 1686
AspS9I	GGNCC	8 cut(s)	131, 272, 288, 503, 556, 1113, 1689, 1764
AsuHPI	GGTGA	5 cut(s)	425, 1246, 1675, 1777, 1963
AvaI	CYCGRG	1 cut(s)	676
AvaII	GGWCC	4 cut(s)	288, 556, 1689, 1764
BalI	TGGCCA	3 cut(s)	393, 1272, 1700
BamHI	GGATCC	1 cut(s)	1648
BanI	GGYRCC	4 cut(s)	92, 342, 760, 997
BanII	GRGCYC	1 cut(s)	683
BbsI	GAAGAC	1 cut(s)	1558
Bbv12I	GWGCWC	1 cut(s)	683
BbvI	GCAGC	8 cut(s)	315, 589, 651, 801, 1045, 1072, 1432, 1912
BccI	CCATC	9 cut(s)	86, 361, 466, 515, 1104, 1124, 1496, 1532, 2010
BceAI	ACGGC	3 cut(s)	260, 627, 748
BcgI	CGANNNNNNTGC	2 cut(s)	186, 220
BciT130I	CCWGG	4 cut(s)	1064, 1313, 1329, 1761
BciVI	GTATCC	1 cut(s)	1767
BclI	TGATCA	1 cut(s)	1369
BcoDI	GTCTC	1 cut(s)	295
BfaI	CTAG	2 cut(s)	1499, 1638
BfmI	CTRYAG	1 cut(s)	1926
BfoI	RGCGCY	2 cut(s)	346, 499
BfuAI	ACCTGC	1 cut(s)	1509
BfuI	GTATCC	1 cut(s)	1767
BglI	GCCNNNNNGGC	2 cut(s)	271, 493
BmcAI	AGTACT	1 cut(s)	1412
Bme1390I	CCNGG	4 cut(s)	1064, 1313, 1329, 1761
Bme18I	GGWCC	4 cut(s)	288, 556, 1689, 1764
BmeT110I	CYCGRG	1 cut(s)	676
BmgBI	CACGTC	1 cut(s)	317
BmgT120I	GGNCC	8 cut(s)	131, 272, 288, 503, 556, 1113, 1689, 1764
BmrFI	CCNGG	4 cut(s)	1064, 1313, 1329, 1761
BmrI	ACTGGG	1 cut(s)	1880
BmsI	GCATC	3 cut(s)	444, 707, 1243
BmuI	ACTGGG	1 cut(s)	1880
BpiI	GAAGAC	1 cut(s)	1558
Bpu10I	CCTNAGC	1 cut(s)	499
BpuEI	CTTGAG	4 cut(s)	556, 1435, 1457, 1601
BsaBI	GATNNNNATC	3 cut(s)	468, 1257, 1506
BsaHI	GRCGYC	2 cut(s)	343, 672
BsaJI	CCNNGG	7 cut(s)	275, 491, 684, 864, 1327, 1760, 1942
BsaWI	WCCGGW	3 cut(s)	584, 610, 1720
Bsc4I	CCNNNNNNNGG	5 cut(s)	269, 865, 1069, 1215, 1766
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	4 cut(s)	32, 291, 394, 1875
Bse8I	GATNNNNATC	3 cut(s)	468, 1257, 1506
BseAI	TCCGGA	1 cut(s)	584
BseBI	CCWGG	4 cut(s)	1064, 1313, 1329, 1761
BseDI	CCNNGG	7 cut(s)	275, 491, 684, 864, 1327, 1760, 1942
BseGI	GGATG	5 cut(s)	874, 1115, 1561, 1900, 2021
BseJI	GATNNNNATC	3 cut(s)	468, 1257, 1506
BseLI	CCNNNNNNNGG	5 cut(s)	269, 865, 1069, 1215, 1766
BseMII	CTCAG	4 cut(s)	646, 731, 1060, 1455
BseNI	ACTGG	4 cut(s)	32, 291, 394, 1875
BseRI	GAGGAG	3 cut(s)	27, 197, 1143
BseXI	GCAGC	8 cut(s)	315, 589, 651, 801, 1045, 1072, 1432, 1912
BseYI	CCCAGC	2 cut(s)	64, 694
BsgI	GTGCAG	3 cut(s)	800, 993, 1052
Bsh1236I	CGCG	1 cut(s)	525
BshFI	GGCC	9 cut(s)	133, 247, 274, 381, 393, 504, 1115, 1272, 1700
BshNI	GGYRCC	4 cut(s)	92, 342, 760, 997
BsiHKAI	GWGCWC	1 cut(s)	683
BsiHKCI	CYCGRG	1 cut(s)	676
BsiSI	CCGG	5 cut(s)	90, 585, 611, 1721, 1767
BslFI	GGGAC	1 cut(s)	659
BslI	CCNNNNNNNGG	5 cut(s)	269, 865, 1069, 1215, 1766
BsmAI	GTCTC	1 cut(s)	295
BsmFI	GGGAC	1 cut(s)	659
BsnI	GGCC	9 cut(s)	133, 247, 274, 381, 393, 504, 1115, 1272, 1700
BsoBI	CYCGRG	1 cut(s)	676
Bsp1286I	GDGCHC	1 cut(s)	683
Bsp13I	TCCGGA	1 cut(s)	584
Bsp1407I	TGTACA	1 cut(s)	1320
Bsp19I	CCATGG	1 cut(s)	864
BspACI	CCGC	8 cut(s)	75, 111, 263, 346, 565, 568, 1216, 1661
BspANI	GGCC	9 cut(s)	133, 247, 274, 381, 393, 504, 1115, 1272, 1700
BspCNI	CTCAG	4 cut(s)	645, 732, 1059, 1456
BspEI	TCCGGA	1 cut(s)	584
BspFNI	CGCG	1 cut(s)	525
BspMAI	CTGCAG	1 cut(s)	1930
BspMI	ACCTGC	1 cut(s)	1509
BspPI	GGATC	6 cut(s)	443, 930, 1502, 1643, 1656, 1894
BspT107I	GGYRCC	4 cut(s)	92, 342, 760, 997
BsrBI	CCGCTC	1 cut(s)	570
BsrFI	RCCGGY	1 cut(s)	89
BsrGI	TGTACA	1 cut(s)	1320
BsrI	ACTGG	4 cut(s)	32, 291, 394, 1875
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	7 cut(s)	275, 491, 684, 864, 1327, 1760, 1942
BssNI	GRCGYC	2 cut(s)	343, 672
BssT1I	CCWWGG	3 cut(s)	491, 684, 864
Bst2UI	CCWGG	4 cut(s)	1064, 1313, 1329, 1761
Bst4CI	ACNGT	5 cut(s)	97, 306, 445, 959, 1298
Bst6I	CTCTTC	1 cut(s)	781
BstACI	GRCGYC	2 cut(s)	343, 672
BstAPI	GCANNNNNTGC	1 cut(s)	980
BstAUI	TGTACA	1 cut(s)	1320
BstC8I	GCNNGC	3 cut(s)	659, 1095, 1772
BstDEI	CTNAG	6 cut(s)	499, 632, 740, 1046, 1464, 1905
BstDSI	CCRYGG	2 cut(s)	864, 1942
BstF5I	GGATG	5 cut(s)	874, 1115, 1561, 1900, 2021
BstFNI	CGCG	1 cut(s)	525
BstH2I	RGCGCY	2 cut(s)	346, 499
BstHHI	GCGC	3 cut(s)	345, 498, 1686
BstMAI	GTCTC	1 cut(s)	295
BstMWI	GCNNNNNNNGC	7 cut(s)	74, 271, 493, 980, 1094, 1692, 1780
BstNI	CCWGG	4 cut(s)	1064, 1313, 1329, 1761
BstSCI	CCNGG	4 cut(s)	1062, 1311, 1327, 1759
BstSFI	CTRYAG	1 cut(s)	1926
BstUI	CGCG	1 cut(s)	525
BstV1I	GCAGC	8 cut(s)	315, 589, 651, 801, 1045, 1072, 1432, 1912
BstV2I	GAAGAC	1 cut(s)	1558
BstX2I	RGATCY	3 cut(s)	435, 922, 1648
BstXI	CCANNNNNNTGG	2 cut(s)	401, 1123
BstYI	RGATCY	3 cut(s)	435, 922, 1648
BsuI	GTATCC	1 cut(s)	1767
BsuRI	GGCC	9 cut(s)	133, 247, 274, 381, 393, 504, 1115, 1272, 1700
BtgI	CCRYGG	2 cut(s)	864, 1942
BtrI	CACGTC	1 cut(s)	317
BtsCI	GGATG	5 cut(s)	874, 1115, 1561, 1900, 2021
BtsI	GCAGTG	1 cut(s)	1815
BtsIMutI	CAGTG	1 cut(s)	1815
BveI	ACCTGC	1 cut(s)	1509
Cac8I	GCNNGC	3 cut(s)	659, 1095, 1772
CaiI	CAGNNNCTG	1 cut(s)	328
CfoI	GCGC	3 cut(s)	345, 498, 1686
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	8 cut(s)	131, 272, 288, 503, 556, 1113, 1689, 1764
CseI	GACGC	1 cut(s)	645
CsiI	ACCWGGT	1 cut(s)	1062
Csp6I	GTAC	3 cut(s)	998, 1321, 1411
CviAII	CATG	4 cut(s)	172, 865, 1274, 1603
CviQI	GTAC	3 cut(s)	998, 1321, 1411
DdeI	CTNAG	6 cut(s)	499, 632, 740, 1046, 1464, 1905
DinI	GGCGCC	1 cut(s)	344
DrdI	GACNNNNNNGTC	1 cut(s)	1301
DseDI	GACNNNNNNGTC	1 cut(s)	1301
EaeI	YGGCCR	3 cut(s)	391, 1270, 1698
Eam1104I	CTCTTC	1 cut(s)	781
EarI	CTCTTC	1 cut(s)	781
EciI	GGCGGA	1 cut(s)	554
Ecl136II	GAGCTC	1 cut(s)	681
Eco130I	CCWWGG	3 cut(s)	491, 684, 864
Eco24I	GRGCYC	1 cut(s)	683
Eco32I	GATATC	1 cut(s)	790
Eco47I	GGWCC	4 cut(s)	288, 556, 1689, 1764
Eco53kI	GAGCTC	1 cut(s)	681
Eco57I	CTGAAG	1 cut(s)	1552
Eco88I	CYCGRG	1 cut(s)	676
EcoICRI	GAGCTC	1 cut(s)	681
EcoO109I	RGGNCCY	1 cut(s)	503
EcoRII	CCWGG	4 cut(s)	1062, 1311, 1327, 1759
EcoRV	GATATC	1 cut(s)	790
EcoT14I	CCWWGG	3 cut(s)	491, 684, 864
EcoT38I	GRGCYC	1 cut(s)	683
EgeI	GGCGCC	1 cut(s)	344
EheI	GGCGCC	1 cut(s)	344
ErhI	CCWWGG	3 cut(s)	491, 684, 864
FaeI	CATG	4 cut(s)	175, 868, 1277, 1606
FalI	AAGNNNNNCTT	4 cut(s)	212, 244, 1796, 1828
FaqI	GGGAC	1 cut(s)	659
FatI	CATG	4 cut(s)	171, 864, 1273, 1602
FauI	CCCGC	1 cut(s)	82
FbaI	TGATCA	1 cut(s)	1369
FblI	GTMKAC	1 cut(s)	1476
FokI	GGATG	5 cut(s)	881, 1122, 1568, 1887, 2028
FriOI	GRGCYC	1 cut(s)	683
FspBI	CTAG	2 cut(s)	1499, 1638
GlaI	GCGC	3 cut(s)	344, 497, 1685
GsaI	CCCAGC	2 cut(s)	68, 698
HaeII	RGCGCY	2 cut(s)	346, 499
HaeIII	GGCC	9 cut(s)	133, 247, 274, 381, 393, 504, 1115, 1272, 1700
HapII	CCGG	5 cut(s)	90, 585, 611, 1721, 1767
HgaI	GACGC	1 cut(s)	645
HhaI	GCGC	3 cut(s)	345, 498, 1686
Hin1I	GRCGYC	2 cut(s)	343, 672
Hin1II	CATG	4 cut(s)	175, 868, 1277, 1606
Hin6I	GCGC	3 cut(s)	343, 496, 1684
HinP1I	GCGC	3 cut(s)	343, 496, 1684
HindIII	AAGCTT	1 cut(s)	1091
HpaII	CCGG	5 cut(s)	90, 585, 611, 1721, 1767
HphI	GGTGA	5 cut(s)	425, 1246, 1675, 1777, 1963
Hpy166II	GTNNAC	5 cut(s)	556, 691, 726, 880, 1477
Hpy8I	GTNNAC	5 cut(s)	556, 691, 726, 880, 1477
Hpy99I	CGWCG	4 cut(s)	131, 255, 674, 784
HpyAV	CCTTC	4 cut(s)	144, 523, 1822, 1972
HpyCH4III	ACNGT	5 cut(s)	97, 306, 445, 959, 1298
HpyCH4IV	ACGT	6 cut(s)	126, 316, 483, 672, 728, 782
HpyF10VI	GCNNNNNNNGC	7 cut(s)	74, 271, 493, 980, 1094, 1692, 1780
HpyF3I	CTNAG	6 cut(s)	499, 632, 740, 1046, 1464, 1905
HpySE526I	ACGT	6 cut(s)	126, 316, 483, 672, 728, 782
Hsp92I	GRCGYC	2 cut(s)	343, 672
Hsp92II	CATG	4 cut(s)	175, 868, 1277, 1606
HspAI	GCGC	3 cut(s)	343, 496, 1684
KasI	GGCGCC	1 cut(s)	342
Kpn2I	TCCGGA	1 cut(s)	584
KpnI	GGTACC	1 cut(s)	1001
Ksp22I	TGATCA	1 cut(s)	1369
LmnI	GCTCC	7 cut(s)	61, 184, 325, 587, 610, 686, 1465
Lsp1109I	GCAGC	8 cut(s)	315, 589, 651, 801, 1045, 1072, 1432, 1912
LweI	GCATC	3 cut(s)	444, 707, 1243
MabI	ACCWGGT	1 cut(s)	1062
MaeI	CTAG	2 cut(s)	1499, 1638
MaeII	ACGT	6 cut(s)	126, 316, 483, 672, 728, 782
MaeIII	GTNAC	1 cut(s)	1963
MbiI	CCGCTC	1 cut(s)	570
MboII	GAAGA	6 cut(s)	40, 73, 768, 917, 1537, 1558
MfeI	CAATTG	1 cut(s)	144
MflI	RGATCY	3 cut(s)	435, 922, 1648
MhlI	GDGCHC	1 cut(s)	683
MlsI	TGGCCA	3 cut(s)	393, 1272, 1700
MluNI	TGGCCA	3 cut(s)	393, 1272, 1700
Mly113I	GGCGCC	1 cut(s)	343
MlyI	GAGTC	4 cut(s)	64, 550, 555, 1311
MmeI	TCCRAC	1 cut(s)	824
Mox20I	TGGCCA	3 cut(s)	393, 1272, 1700
MroI	TCCGGA	1 cut(s)	584
MroXI	GAANNNNTTC	1 cut(s)	1565
MscI	TGGCCA	3 cut(s)	393, 1272, 1700
MseI	TTAA	5 cut(s)	834, 1220, 1739, 1791, 1854
MslI	CAYNNNNRTG	6 cut(s)	50, 549, 1121, 1146, 1554, 1601
Msp20I	TGGCCA	3 cut(s)	393, 1272, 1700
MspA1I	CMGCKG	1 cut(s)	1892
MspI	CCGG	5 cut(s)	90, 585, 611, 1721, 1767
MspR9I	CCNGG	4 cut(s)	1064, 1313, 1329, 1761
MunI	CAATTG	1 cut(s)	144
MvaI	CCWGG	4 cut(s)	1064, 1313, 1329, 1761
MvnI	CGCG	1 cut(s)	525
MwoI	GCNNNNNNNGC	7 cut(s)	74, 271, 493, 980, 1094, 1692, 1780
NarI	GGCGCC	1 cut(s)	343
NcoI	CCATGG	1 cut(s)	864
NlaIII	CATG	4 cut(s)	175, 868, 1277, 1606
NmeAIII	GCCGAG	3 cut(s)	256, 780, 1432
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 250
PdmI	GAANNNNTTC	1 cut(s)	1565
PfeI	GAWTC	8 cut(s)	19, 626, 736, 827, 855, 1167, 1362, 2030
PfoI	TCCNGGA	1 cut(s)	1311
PleI	GAGTC	4 cut(s)	64, 549, 555, 1310
PluTI	GGCGCC	1 cut(s)	346
PpsI	GAGTC	4 cut(s)	64, 549, 555, 1310
PshBI	ATTAAT	1 cut(s)	1739
PsiI	TTATAA	1 cut(s)	468
Psp124BI	GAGCTC	1 cut(s)	683
Psp6I	CCWGG	4 cut(s)	1062, 1311, 1327, 1759
PspFI	CCCAGC	2 cut(s)	64, 694
PspGI	CCWGG	4 cut(s)	1062, 1311, 1327, 1759
PspPI	GGNCC	8 cut(s)	131, 272, 288, 503, 556, 1113, 1689, 1764
PstI	CTGCAG	1 cut(s)	1930
PstNI	CAGNNNCTG	1 cut(s)	328
PsuI	RGATCY	3 cut(s)	435, 922, 1648
PvuII	CAGCTG	1 cut(s)	1892
RsaI	GTAC	3 cut(s)	999, 1322, 1412
RsaNI	GTAC	3 cut(s)	998, 1321, 1411
RseI	CAYNNNNRTG	6 cut(s)	50, 549, 1121, 1146, 1554, 1601
SacI	GAGCTC	1 cut(s)	683
SaqAI	TTAA	5 cut(s)	834, 1220, 1739, 1791, 1854
Sau96I	GGNCC	8 cut(s)	131, 272, 288, 503, 556, 1113, 1689, 1764
ScaI	AGTACT	1 cut(s)	1412
SchI	GAGTC	4 cut(s)	64, 550, 555, 1311
ScrFI	CCNGG	4 cut(s)	1064, 1313, 1329, 1761
SduI	GDGCHC	1 cut(s)	683
SexAI	ACCWGGT	1 cut(s)	1062
SfaNI	GCATC	3 cut(s)	444, 707, 1243
SfcI	CTRYAG	1 cut(s)	1926
SfoI	GGCGCC	1 cut(s)	344
SinI	GGWCC	4 cut(s)	288, 556, 1689, 1764
SmiMI	CAYNNNNRTG	6 cut(s)	50, 549, 1121, 1146, 1554, 1601
SmlI	CTYRAG	4 cut(s)	571, 1414, 1436, 1580
SmoI	CTYRAG	4 cut(s)	571, 1414, 1436, 1580
SsiI	CCGC	8 cut(s)	75, 111, 263, 346, 565, 568, 1216, 1661
SspDI	GGCGCC	1 cut(s)	342
SspI	AATATT	3 cut(s)	1335, 1591, 1743
SspMI	CTAG	2 cut(s)	1499, 1638
SstI	GAGCTC	1 cut(s)	683
StyD4I	CCNGG	4 cut(s)	1062, 1311, 1327, 1759
StyI	CCWWGG	3 cut(s)	491, 684, 864
TaaI	ACNGT	5 cut(s)	97, 306, 445, 959, 1298
TaiI	ACGT	6 cut(s)	129, 319, 486, 675, 731, 785
TaqI	TCGA	7 cut(s)	22, 196, 299, 669, 779, 825, 1300
TaqII	GACCGA	1 cut(s)	573
TatI	WGTACW	2 cut(s)	1320, 1410
TauI	GCSGC	3 cut(s)	265, 348, 570
TfiI	GAWTC	8 cut(s)	19, 626, 736, 827, 855, 1167, 1362, 2030
Tru1I	TTAA	5 cut(s)	834, 1220, 1739, 1791, 1854
Tru9I	TTAA	5 cut(s)	834, 1220, 1739, 1791, 1854
TscAI	CASTG	1 cut(s)	1822
TseI	GCWGC	8 cut(s)	328, 602, 639, 814, 1033, 1085, 1445, 1925
TspDTI	ATGAA	7 cut(s)	17, 1127, 1290, 1354, 1365, 1443, 2028
TspGWI	ACGGA	2 cut(s)	127, 1931
TspRI	CASTG	1 cut(s)	1822
VpaK11BI	GGWCC	4 cut(s)	288, 556, 1689, 1764
VspI	ATTAAT	1 cut(s)	1739
XapI	RAATTY	4 cut(s)	704, 745, 1950, 2006
XbaI	TCTAGA	1 cut(s)	1498
XmiI	GTMKAC	1 cut(s)	1476
XmnI	GAANNNNTTC	1 cut(s)	1565
XspI	CTAG	2 cut(s)	1499, 1638
ZraI	GACGTC	1 cut(s)	673
ZrmI	AGTACT	1 cut(s)	1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.