Histone deacetylase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 84 |
| Acc65I | GGTACC | 1 cut(s) | 304 |
| AccB1I | GGYRCC | 1 cut(s) | 304 |
| AcsI | RAATTY | 1 cut(s) | 153 |
| AcyI | GRCGYC | 1 cut(s) | 81 |
| AfaI | GTAC | 1 cut(s) | 306 |
| AgsI | TTSAA | 2 cut(s) | 94, 130 |
| AluBI | AGCT | 4 cut(s) | 70, 90, 187, 284 |
| AluI | AGCT | 4 cut(s) | 70, 90, 187, 284 |
| Alw26I | GTCTC | 1 cut(s) | 64 |
| ApeKI | GCWGC | 4 cut(s) | 11, 187, 284, 340 |
| ApoI | RAATTY | 1 cut(s) | 153 |
| Asp718I | GGTACC | 1 cut(s) | 304 |
| BanI | GGYRCC | 1 cut(s) | 304 |
| BbvI | GCAGC | 3 cut(s) | 174, 271, 352 |
| BcoDI | GTCTC | 1 cut(s) | 64 |
| BfaI | CTAG | 1 cut(s) | 373 |
| BglII | AGATCT | 1 cut(s) | 295 |
| BisI | GCNGC | 4 cut(s) | 12, 188, 285, 341 |
| BlsI | GCNGC | 4 cut(s) | 13, 189, 286, 342 |
| BmiI | GGNNCC | 1 cut(s) | 306 |
| BmsI | GCATC | 1 cut(s) | 199 |
| BsaHI | GRCGYC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 237 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 1 cut(s) | 237 |
| BseGI | GGATG | 2 cut(s) | 190, 247 |
| BseMII | CTCAG | 2 cut(s) | 55, 367 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| BseXI | GCAGC | 3 cut(s) | 174, 271, 352 |
| BsgI | GTGCAG | 1 cut(s) | 359 |
| BshNI | GGYRCC | 1 cut(s) | 304 |
| BslFI | GGGAC | 1 cut(s) | 68 |
| BsmAI | GTCTC | 1 cut(s) | 64 |
| BsmFI | GGGAC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| Bsp19I | CCATGG | 1 cut(s) | 237 |
| BspCNI | CTCAG | 2 cut(s) | 54, 366 |
| BspLI | GGNNCC | 1 cut(s) | 306 |
| BspT107I | GGYRCC | 1 cut(s) | 304 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BssECI | CCNNGG | 1 cut(s) | 237 |
| BssMI | GATC | 1 cut(s) | 295 |
| BssNI | GRCGYC | 1 cut(s) | 81 |
| BssT1I | CCWWGG | 1 cut(s) | 237 |
| Bst4CI | ACNGT | 1 cut(s) | 53 |
| BstACI | GRCGYC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 2 cut(s) | 41, 353 |
| BstDSI | CCRYGG | 1 cut(s) | 237 |
| BstF5I | GGATG | 2 cut(s) | 190, 247 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMAI | GTCTC | 1 cut(s) | 64 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstV1I | GCAGC | 3 cut(s) | 174, 271, 352 |
| BstX2I | RGATCY | 1 cut(s) | 295 |
| BstYI | RGATCY | 1 cut(s) | 295 |
| BtgI | CCRYGG | 1 cut(s) | 237 |
| BtsCI | GGATG | 2 cut(s) | 190, 247 |
| Csp6I | GTAC | 1 cut(s) | 305 |
| CviAII | CATG | 1 cut(s) | 238 |
| CviJI | RGCY | 7 cut(s) | 46, 70, 90, 187, 206, 274, 284 |
| CviKI_1 | RGCY | 7 cut(s) | 46, 70, 90, 187, 206, 274, 284 |
| CviQI | GTAC | 1 cut(s) | 305 |
| DdeI | CTNAG | 2 cut(s) | 41, 353 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 1 cut(s) | 237 |
| EcoT14I | CCWWGG | 1 cut(s) | 237 |
| ErhI | CCWWGG | 1 cut(s) | 237 |
| FaeI | CATG | 1 cut(s) | 241 |
| FaiI | YATR | 4 cut(s) | 113, 149, 223, 239 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 59, 91 |
| FaqI | GGGAC | 1 cut(s) | 68 |
| FatI | CATG | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 4 cut(s) | 12, 188, 285, 341 |
| FokI | GGATG | 2 cut(s) | 177, 254 |
| Fsp4HI | GCNGC | 4 cut(s) | 12, 188, 285, 341 |
| FspBI | CTAG | 1 cut(s) | 373 |
| GluI | GCNGC | 4 cut(s) | 12, 188, 285, 341 |
| Hin1I | GRCGYC | 1 cut(s) | 81 |
| Hin1II | CATG | 1 cut(s) | 241 |
| HindIII | AAGCTT | 1 cut(s) | 88 |
| HinfI | GANTC | 2 cut(s) | 200, 228 |
| Hpy166II | GTNNAC | 3 cut(s) | 135, 167, 253 |
| Hpy8I | GTNNAC | 3 cut(s) | 135, 167, 253 |
| HpyAV | CCTTC | 1 cut(s) | 340 |
| HpyCH4III | ACNGT | 1 cut(s) | 53 |
| HpyCH4IV | ACGT | 1 cut(s) | 81 |
| HpyCH4V | TGCA | 4 cut(s) | 190, 264, 287, 340 |
| HpyF3I | CTNAG | 2 cut(s) | 41, 353 |
| HpySE526I | ACGT | 1 cut(s) | 81 |
| Hsp92I | GRCGYC | 1 cut(s) | 81 |
| Hsp92II | CATG | 1 cut(s) | 241 |
| KpnI | GGTACC | 1 cut(s) | 308 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 5 cut(s) | 28, 33, 117, 324, 332 |
| Lsp1109I | GCAGC | 3 cut(s) | 174, 271, 352 |
| LweI | GCATC | 1 cut(s) | 199 |
| MaeI | CTAG | 1 cut(s) | 373 |
| MaeII | ACGT | 1 cut(s) | 81 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 1 cut(s) | 305 |
| MflI | RGATCY | 1 cut(s) | 295 |
| MluCI | AATT | 4 cut(s) | 25, 153, 259, 328 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MnlI | CCTC | 2 cut(s) | 318, 369 |
| NcoI | CCATGG | 1 cut(s) | 237 |
| NdeII | GATC | 1 cut(s) | 295 |
| NlaIII | CATG | 1 cut(s) | 241 |
| NlaIV | GGNNCC | 1 cut(s) | 306 |
| NmeAIII | GCCGAG | 1 cut(s) | 153 |
| PfeI | GAWTC | 2 cut(s) | 200, 228 |
| PkrI | GCNGC | 4 cut(s) | 13, 189, 286, 342 |
| PspN4I | GGNNCC | 1 cut(s) | 306 |
| PsuI | RGATCY | 1 cut(s) | 295 |
| RsaI | GTAC | 1 cut(s) | 306 |
| RsaNI | GTAC | 1 cut(s) | 305 |
| SatI | GCNGC | 4 cut(s) | 12, 188, 285, 341 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| SetI | ASST | 9 cut(s) | 22, 72, 84, 92, 99, 189, 286, 310, 351 |
| SfaNI | GCATC | 1 cut(s) | 199 |
| Sse9I | AATT | 4 cut(s) | 25, 153, 259, 328 |
| SspMI | CTAG | 1 cut(s) | 373 |
| StyI | CCWWGG | 1 cut(s) | 237 |
| TaaI | ACNGT | 1 cut(s) | 53 |
| TaiI | ACGT | 1 cut(s) | 84 |
| TasI | AATT | 4 cut(s) | 25, 153, 259, 328 |
| TfiI | GAWTC | 2 cut(s) | 200, 228 |
| TseI | GCWGC | 4 cut(s) | 11, 187, 284, 340 |
| TspGWI | ACGGA | 1 cut(s) | 183 |
| XapI | RAATTY | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 373 |
| ZraI | GACGTC | 1 cut(s) | 82 |