Histone deacetylase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 9 |
| Acc36I | ACCTGC | 1 cut(s) | 9 |
| AfaI | GTAC | 2 cut(s) | 185, 211 |
| AluBI | AGCT | 3 cut(s) | 39, 47, 202 |
| AluI | AGCT | 3 cut(s) | 39, 47, 202 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 2 cut(s) | 39, 253 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| BbvI | GCAGC | 2 cut(s) | 26, 240 |
| BccI | CCATC | 3 cut(s) | 39, 58, 78 |
| BclI | TGATCA | 1 cut(s) | 142 |
| BfmI | CTRYAG | 1 cut(s) | 16 |
| BfuAI | ACCTGC | 1 cut(s) | 9 |
| BisI | GCNGC | 2 cut(s) | 40, 254 |
| BlsI | GCNGC | 2 cut(s) | 41, 255 |
| BmcAI | AGTACT | 2 cut(s) | 185, 211 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 29 |
| BmrI | ACTGGG | 1 cut(s) | 96 |
| BmuI | ACTGGG | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 3 cut(s) | 208, 210, 226 |
| Bse1I | ACTGG | 1 cut(s) | 91 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BseNI | ACTGG | 1 cut(s) | 91 |
| BseXI | GCAGC | 2 cut(s) | 26, 240 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspCNI | CTCAG | 1 cut(s) | 264 |
| BspLI | GGNNCC | 1 cut(s) | 29 |
| BspMAI | CTGCAG | 1 cut(s) | 20 |
| BspMI | ACCTGC | 1 cut(s) | 9 |
| BsrI | ACTGG | 1 cut(s) | 91 |
| BssMI | GATC | 1 cut(s) | 142 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 49 |
| BstDEI | CTNAG | 2 cut(s) | 35, 272 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMBI | GATC | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 48 |
| BstSFI | CTRYAG | 1 cut(s) | 16 |
| BstV1I | GCAGC | 2 cut(s) | 26, 240 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 77 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| BveI | ACCTGC | 1 cut(s) | 9 |
| Cac8I | GCNNGC | 1 cut(s) | 49 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| Csp6I | GTAC | 2 cut(s) | 184, 210 |
| CviAII | CATG | 1 cut(s) | 217 |
| CviJI | RGCY | 4 cut(s) | 39, 47, 69, 202 |
| CviKI_1 | RGCY | 4 cut(s) | 39, 47, 69, 202 |
| CviQI | GTAC | 2 cut(s) | 184, 210 |
| DdeI | CTNAG | 2 cut(s) | 35, 272 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 220 |
| FaiI | YATR | 5 cut(s) | 13, 123, 218, 239, 260 |
| FatI | CATG | 1 cut(s) | 216 |
| FbaI | TGATCA | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 2 cut(s) | 40, 254 |
| FokI | GGATG | 1 cut(s) | 76 |
| Fsp4HI | GCNGC | 2 cut(s) | 40, 254 |
| GluI | GCNGC | 2 cut(s) | 40, 254 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| Hin1II | CATG | 1 cut(s) | 220 |
| HindIII | AAGCTT | 1 cut(s) | 45 |
| HinfI | GANTC | 2 cut(s) | 135, 223 |
| Hpy166II | GTNNAC | 1 cut(s) | 222 |
| Hpy188III | TCNNGA | 3 cut(s) | 205, 227, 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 222 |
| HpyCH4V | TGCA | 3 cut(s) | 18, 42, 51 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 48 |
| HpyF3I | CTNAG | 2 cut(s) | 35, 272 |
| Hsp92II | CATG | 1 cut(s) | 220 |
| Ksp22I | TGATCA | 1 cut(s) | 142 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LmnI | GCTCC | 1 cut(s) | 273 |
| LpnPI | CCDG | 4 cut(s) | 4, 72, 133, 246 |
| Lsp1109I | GCAGC | 2 cut(s) | 26, 240 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MluCI | AATT | 1 cut(s) | 261 |
| MlyI | GAGTC | 1 cut(s) | 217 |
| MnlI | CCTC | 3 cut(s) | 54, 75, 109 |
| MseI | TTAA | 1 cut(s) | 153 |
| MslI | CAYNNNNRTG | 2 cut(s) | 75, 101 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 48 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 1 cut(s) | 220 |
| NlaIV | GGNNCC | 1 cut(s) | 29 |
| PaqCI | CACCTGC | 1 cut(s) | 9 |
| PfeI | GAWTC | 1 cut(s) | 135 |
| PkrI | GCNGC | 2 cut(s) | 41, 255 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| PspN4I | GGNNCC | 1 cut(s) | 29 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PstI | CTGCAG | 1 cut(s) | 20 |
| RsaI | GTAC | 2 cut(s) | 185, 211 |
| RsaNI | GTAC | 2 cut(s) | 184, 210 |
| RseI | CAYNNNNRTG | 2 cut(s) | 75, 101 |
| SaqAI | TTAA | 1 cut(s) | 153 |
| SatI | GCNGC | 2 cut(s) | 40, 254 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| ScaI | AGTACT | 2 cut(s) | 185, 211 |
| SchI | GAGTC | 1 cut(s) | 217 |
| SetI | ASST | 5 cut(s) | 23, 41, 49, 204, 235 |
| SfcI | CTRYAG | 1 cut(s) | 16 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 75, 101 |
| SmlI | CTYRAG | 3 cut(s) | 187, 205, 225 |
| SmoI | CTYRAG | 3 cut(s) | 187, 205, 225 |
| Sse9I | AATT | 1 cut(s) | 261 |
| TasI | AATT | 1 cut(s) | 261 |
| TatI | WGTACW | 2 cut(s) | 183, 209 |
| TfiI | GAWTC | 1 cut(s) | 135 |
| Tru1I | TTAA | 1 cut(s) | 153 |
| Tru9I | TTAA | 1 cut(s) | 153 |
| TseI | GCWGC | 2 cut(s) | 39, 253 |
| TspDTI | ATGAA | 5 cut(s) | 127, 138, 205, 212, 254 |
| ZrmI | AGTACT | 2 cut(s) | 185, 211 |