ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51930 AT5G41430 AT5G41440 AT5G41450 |
| fragaria_vesca | FvH4_1g06590 FvH4_1g06600 |
| prunus_persica | Prupe.6G077000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0092061 RchiOBHm_Chr2g0092331 |
| rosa_laevigata | RLG00000016274 RLG00000016298 RLG00000016299 RLG00000016300 |
| rosa_multiflora | Rmu_sc0000524.1_g000007 Rmu_sc0003289.1_g000010 Rmu_sc0003289.1_g000011 Rmu_sc0003289.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00149220 Rroxscaffold_2G00149230 Rroxscaffold_2G00149240 Rroxscaffold_2G00149480 Rroxscaffold_2G00149500 |
| rosa_rugosa | Rorug02G0022800 Rorug02G0024800 Rorug02G0024800 Rorug02G0024900 |
| rosa_samantha | Rh2AG068400 Rh2AG068500 Rh2AG070800 Rh2AG070900 Rh2BG067700 Rh2BG070300 Rh2BG070400 Rh2BG070500 Rh2CG069000 Rh2CG071500 Rh2CG071800 Rh2CG071900 Rh2DG067300 Rh2DG069300 Rh2DG069400 |
| rosa_wichuraiana | Rw2G006140 Rw2G006150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 201 |
| AflIII | ACRYGT | 1 cut(s) | 71 |
| AgsI | TTSAA | 3 cut(s) | 58, 107, 191 |
| AjiI | CACGTC | 1 cut(s) | 72 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 115, 147 |
| Alw26I | GTCTC | 1 cut(s) | 49 |
| AoxI | GGCC | 1 cut(s) | 177 |
| ApeKI | GCWGC | 2 cut(s) | 157, 169 |
| ApoI | RAATTY | 1 cut(s) | 201 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 204 |
| AsuHPI | GGTGA | 2 cut(s) | 126, 203 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| BbvI | GCAGC | 2 cut(s) | 169, 181 |
| BccI | CCATC | 1 cut(s) | 157 |
| BceAI | ACGGC | 1 cut(s) | 26 |
| BcoDI | GTCTC | 1 cut(s) | 49 |
| BisI | GCNGC | 2 cut(s) | 158, 170 |
| BlsI | GCNGC | 2 cut(s) | 159, 171 |
| BmgBI | CACGTC | 1 cut(s) | 72 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| BseGI | GGATG | 1 cut(s) | 226 |
| BseXI | GCAGC | 2 cut(s) | 169, 181 |
| BsgI | GTGCAG | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 179 |
| BsiSI | CCGG | 1 cut(s) | 111 |
| BsmAI | GTCTC | 1 cut(s) | 49 |
| BsmBI | CGTCTC | 1 cut(s) | 49 |
| BsnI | GGCC | 1 cut(s) | 179 |
| BspANI | GGCC | 1 cut(s) | 179 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| Bst4CI | ACNGT | 1 cut(s) | 252 |
| BstF5I | GGATG | 1 cut(s) | 226 |
| BstMAI | GTCTC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 166 |
| BstV1I | GCAGC | 2 cut(s) | 169, 181 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BsuRI | GGCC | 1 cut(s) | 179 |
| BtrI | CACGTC | 1 cut(s) | 72 |
| BtsCI | GGATG | 1 cut(s) | 226 |
| BtsIMutI | CAGTG | 2 cut(s) | 159, 257 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 98 |
| CviJI | RGCY | 3 cut(s) | 5, 41, 179 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 41, 179 |
| Esp3I | CGTCTC | 1 cut(s) | 49 |
| FaeI | CATG | 1 cut(s) | 101 |
| FaiI | YATR | 4 cut(s) | 25, 49, 99, 198 |
| FatI | CATG | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 2 cut(s) | 158, 170 |
| FokI | GGATG | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 2 cut(s) | 158, 170 |
| GluI | GCNGC | 2 cut(s) | 158, 170 |
| HaeIII | GGCC | 1 cut(s) | 179 |
| HapII | CCGG | 1 cut(s) | 111 |
| Hin1II | CATG | 1 cut(s) | 101 |
| HinfI | GANTC | 1 cut(s) | 191 |
| HpaII | CCGG | 1 cut(s) | 111 |
| HphI | GGTGA | 2 cut(s) | 126, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 58 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4III | ACNGT | 1 cut(s) | 252 |
| HpyCH4IV | ACGT | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 1 cut(s) | 157 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 166 |
| HpySE526I | ACGT | 1 cut(s) | 71 |
| Hsp92II | CATG | 1 cut(s) | 101 |
| LmnI | GCTCC | 1 cut(s) | 10 |
| LpnPI | CCDG | 1 cut(s) | 124 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 181 |
| MaeII | ACGT | 1 cut(s) | 71 |
| MboII | GAAGA | 3 cut(s) | 73, 79, 101 |
| MluCI | AATT | 1 cut(s) | 201 |
| MmeI | TCCRAC | 1 cut(s) | 214 |
| MnlI | CCTC | 1 cut(s) | 30 |
| MroXI | GAANNNNTTC | 1 cut(s) | 204 |
| MspI | CCGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 166 |
| NlaIII | CATG | 1 cut(s) | 101 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PdmI | GAANNNNTTC | 1 cut(s) | 204 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| PkrI | GCNGC | 2 cut(s) | 159, 171 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| SatI | GCNGC | 2 cut(s) | 158, 170 |
| SetI | ASST | 1 cut(s) | 74 |
| SgeI | CNNG | 5 cut(s) | 70, 84, 89, 110, 123 |
| Sse9I | AATT | 1 cut(s) | 201 |
| TaaI | ACNGT | 1 cut(s) | 252 |
| TaiI | ACGT | 1 cut(s) | 74 |
| TasI | AATT | 1 cut(s) | 201 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| TscAI | CASTG | 2 cut(s) | 159, 257 |
| TseI | GCWGC | 2 cut(s) | 157, 169 |
| TspDTI | ATGAA | 4 cut(s) | 80, 102, 197, 213 |
| TspRI | CASTG | 2 cut(s) | 159, 257 |
| XapI | RAATTY | 1 cut(s) | 201 |
| XmnI | GAANNNNTTC | 1 cut(s) | 204 |