Rorug02G0024800

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002220
Physical Location & Seq
Forward (+)
1961275 .. 1964381
3107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0024800.1

Sequence Viewer

Length: 2196 bp
ATGACGATTAAGCCGGCGGTTCGCGTTTCCGACGGGAAACTGATAGTGAAGAACCGGACGGTTCTGACCGGATTACCGGACAATGTGGTCGCCACGTCCGGTTCGGCTTCCGGTCCCGCCGAGGGAGTCTTCCTCGGCGCCGCGTTCGAGGAGGGCAGCAGCCGGCACGTGACTTCTCTCGGAACTTTACAAAACGGCGTGCGTTTCATGGCGTGCTTCCGGTTCAAGCTATGGTGGATGGCCCAGAAAATGGGCCGCTCCGGCCGCGACGTCCCTCTCGAGACTCAATTCCTATTGGTCGAGACCCAAGACGGGTCCCACCTCGAAGAGGACCAGATCGTGTACGCCGTGTTCCTCCCTCTCATCGAAGGCTCCTTCAGGGCTAGCTTACAGGGGAATTACAGCGGAGACGAGCTGGAGCTTTGTTTGGAGAGCGGCGACGTGGACACCAAAGCGGCGTCGTTTAGCCACGCGGTGTTCGTTCACGCCGGGACGGACCCGTTCGTGACGATAACGGAGGCGGTCAGGGCCGTTAAGGTACACCTGAAGACGTTCCGTCAACGTCACGAGAAGAAGCTCCCCGGAATCGTTGACTATTTCGGGTGGTGCACCTGGGACGCGTTTTACCAGGAAGTGACTCAGGAAGGAGTTGAGGCCGGCCTCAAGTCCCTCACCGCCGGCGGAGCGCCGCCGAAGTTTGTCATCATCGACGACGGGTGGCAGTCCGTCGCCGGCGATCAGGACAAAGCCGGGGAGCTACAGAGACTGACCGGAATCAAAGAAAACTCGAAGTTTCAACACAAGGATGATGGGATAATGACGATAGTGAACATAGCAAAAGAAAAATACGGGTTGAAATACGTGTACGTCTGGCACGCGATTACCGGCTACTGGGGAGGAGTCCGGCCCGGAACTGAATACGGGTCGGTTCTGAAGTACCCGGATTTGTCGAAAGGGGTTATGGAAAACGAACCGGCCTGGAAAACGGACATGATCCGGTTACAGGGTCTGGGCTTAGTGAACCCGAAAAGCGTGTACAAGTTTTACAACGAGCTACACAGCTACTTGGCCTCTGCGGGTGTAGATGGGGTTAAGGTGGACGTGCAGTGCGTGCTGGAGACTCTCGGAGCCGGGCTGGGCGGGCGGGTCGAGCTGACCCGGCAGTACCACCAGGCATTGGATGCTTCGGTGTCTCGGAACTTTGAAGATAATGGGATCATAGCATGCATGAGCCATAATACTGATGCGCTGTACTGTGCGAAACAGACGGCGGTGGTGAGAGCCTCCGACGATTTCTACCCGCGCGATCCGAAATCGCATACGATCCACGTGGCGGCGGTGGCGTATAATAGCGTTTTCCTCGGCGAGTTTATGCTGCCGGATTGGGATATGTTCCACTCGCTCCACCCCGCGGCTGAGTACCACGCGTCCGCTAGAGCCATTAGTGGTGGACCTGTTTATGTTAGTGATGCGCCTGGGAAGCATGACTTTGAGCTTTTGAAGAAGATTGTATTGCCGGACGGGTCGGTGCTCCGGGCGCGGTTACCCGGAAGGCCGACCCGGGACTGCTTGTTCACTGATCCGGCCCGGGATGGGGTGAGTTTATTGAAGATATGGAACATGAATAAGTACACAGGTGTAGTGGGGGTGTACAATTGCCAAGGAGCAGCATGGAGTTCACTGGAGAGAAAGAATGCATTCCACGAGACGAAATCGGACGCCATAACCGGTTATGTTCGTGGCCGTGACGTCCACCTCATTAAGGAGGCAGCCACTGATCCCGATTGGAATGGTGACTGCGCCGTGTATTGCAATCGGACAGGGGAGCTTGTGACATTGCCTTACAATGCTGCCATGCCTATTTCCCTCAAAGTGCTTGAACATGAGATTTTCACTGTCAGCCCCATCAGGGTTTTGGCGCCTGGCGTGAGATTCGCTCCTTTGGGACTGGTTGACATGTACAATGCCGGTGGAGCCATTGAAGACTTGAGATATGAGAAGCAGAGATTAGTCTCTATGGAGGTTAAAGGGTGTGGCAAATTTGGTGTGTATTCTTCAGAGAAGCCCAGGAGGTGTTGTGTTGGGACTCATGAGATTGATTTCAGCTATGATTCGGCATCTGGATTGGTGACTTTGAGCTTGGATCATATGCCTGAAGAGGGAAAAAGAGTACAACCAGTCGAGGTTGAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

731

Amino Acids

80.45

Weight (kDa)

6.02

Isoelectric Point (pI)

30.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 7 - 713 0.0 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
AatII GACGTC 2 cut(s) 273, 1752
AccB1I GGYRCC 2 cut(s) 137, 1918
AccB7I CCANNNNNTGG 2 cut(s) 250, 1177
AccBSI CCGCTC 2 cut(s) 258, 435
AclWI GGATC 7 cut(s) 988, 1223, 1301, 1318, 1574, 1772, 2151
AcoI YGGCCR 2 cut(s) 262, 1741
AcsI RAATTY 1 cut(s) 2039
AcuI CTGAAG 5 cut(s) 361, 566, 953, 2040, 2175
AcvI CACGTG 2 cut(s) 169, 1330
AcyI GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
AdeI CACNNNGTG 1 cut(s) 475
AflIII ACRYGT 4 cut(s) 618, 861, 1425, 1956
AgeI ACCGGT 1 cut(s) 1727
AgsI TTSAA 8 cut(s) 226, 797, 856, 1205, 1501, 1609, 1880, 1982
AhdI GACNNNNNGTC 1 cut(s) 555
AjiI CACGTC 3 cut(s) 96, 442, 1102
AjnI CCWGG 7 cut(s) 611, 627, 977, 1170, 1474, 1921, 2066
AloI GAACNNNNNNTCC 2 cut(s) 1556, 1588
Alw21I GWGCWC 2 cut(s) 611, 1533
Alw26I GTCTC 8 cut(s) 275, 296, 402, 757, 1112, 1197, 1700, 2017
Alw44I GTGCAC 1 cut(s) 607
AlwI GGATC 7 cut(s) 988, 1223, 1301, 1318, 1574, 1772, 2151
AlwNI CAGNNNCTG 3 cut(s) 766, 1009, 1775
Ama87I CYCGRG 3 cut(s) 278, 1560, 1587
ApaLI GTGCAC 1 cut(s) 607
ApeKI GCWGC 6 cut(s) 156, 159, 1375, 1667, 1769, 1850
ApoI RAATTY 1 cut(s) 2039
AsiGI ACCGGT 1 cut(s) 1727
Asp700I GAANNNNTTC 2 cut(s) 551, 1697
AspLEI GCGC 8 cut(s) 140, 688, 1249, 1305, 1474, 1540, 1802, 1921
AsuHPI GGTGA 5 cut(s) 664, 1288, 1609, 1805, 2140
AsuNHI GCTAGC 1 cut(s) 383
AvaI CYCGRG 3 cut(s) 278, 1560, 1587
AvaII GGWCC 5 cut(s) 113, 315, 331, 496, 1451
BaeGI GKGCMC 1 cut(s) 611
BanI GGYRCC 2 cut(s) 137, 1918
BauI CACGAG 2 cut(s) 566, 1703
BbrPI CACGTG 2 cut(s) 169, 1330
BbsI GAAGAC 3 cut(s) 121, 554, 1989
Bbv12I GWGCWC 2 cut(s) 611, 1533
BbvI GCAGC 6 cut(s) 168, 171, 1362, 1679, 1781, 1837
BccI CCATC 5 cut(s) 232, 803, 1079, 1586, 1913
BceAI ACGGC 6 cut(s) 211, 332, 515, 1284, 1728, 1787
BciT130I CCWGG 7 cut(s) 613, 629, 979, 1172, 1476, 1923, 2068
BcoDI GTCTC 8 cut(s) 275, 296, 402, 757, 1112, 1197, 1700, 2017
BfaI CTAG 2 cut(s) 384, 1434
BfmI CTRYAG 1 cut(s) 758
BfoI RGCGCY 3 cut(s) 141, 689, 1922
BglI GCCNNNNNGGC 1 cut(s) 261
Bme18I GGWCC 5 cut(s) 113, 315, 331, 496, 1451
BmeRI GACNNNNNGTC 1 cut(s) 555
BmeT110I CYCGRG 3 cut(s) 278, 1560, 1587
BmgBI CACGTC 3 cut(s) 96, 442, 1102
BmiI GGNNCC 9 cut(s) 115, 139, 316, 317, 373, 498, 1129, 1920, 1975
BmrI ACTGGG 1 cut(s) 901
BmsI GCATC 4 cut(s) 1171, 1234, 1459, 2126
BmtI GCTAGC 1 cut(s) 387
BmuI ACTGGG 1 cut(s) 901
BpiI GAAGAC 3 cut(s) 121, 554, 1989
BplI GAGNNNNNCTC 4 cut(s) 117, 149, 1921, 1953
BpmI CTGGAG 3 cut(s) 437, 1136, 1703
BpuEI CTTGAG 2 cut(s) 647, 2008
BsaAI YACGTR 3 cut(s) 169, 862, 1330
BsaHI GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
BsaI GGTCTC 1 cut(s) 296
BsaWI WCCGGW 9 cut(s) 54, 68, 76, 98, 110, 219, 770, 996, 1727
BsaXI ACNNNNNCTCC 2 cut(s) 2062, 2092
Bse118I RCCGGY 9 cut(s) 13, 162, 656, 677, 731, 884, 973, 1727, 1967
Bse1I ACTGG 4 cut(s) 896, 1686, 1953, 2177
Bse3DI GCAATG 1 cut(s) 1835
BseBI CCWGG 7 cut(s) 613, 629, 979, 1172, 1476, 1923, 2068
BseGI GGATG 4 cut(s) 243, 811, 1186, 1597
BseMI GCAATG 1 cut(s) 1835
BseMII CTCAG 2 cut(s) 653, 1407
BseNI ACTGG 4 cut(s) 896, 1686, 1953, 2177
BseRI GAGGAG 2 cut(s) 164, 912
BseSI GKGCMC 1 cut(s) 611
BseX3I CGGCCG 1 cut(s) 262
BseXI GCAGC 6 cut(s) 168, 171, 1362, 1679, 1781, 1837
BseYI CCCAGC 1 cut(s) 1135
BsgI GTGCAG 1 cut(s) 1124
Bsh1285I CGRYCG 1 cut(s) 265
BshNI GGYRCC 2 cut(s) 137, 1918
BshTI ACCGGT 1 cut(s) 1727
BsiEI CGRYCG 1 cut(s) 265
BsiHKAI GWGCWC 2 cut(s) 611, 1533
BsiHKCI CYCGRG 3 cut(s) 278, 1560, 1587
BslFI GGGAC 9 cut(s) 99, 257, 301, 505, 629, 652, 1577, 1959, 2098
BsmAI GTCTC 8 cut(s) 275, 296, 402, 757, 1112, 1197, 1700, 2017
BsmBI CGTCTC 2 cut(s) 402, 1700
BsmFI GGGAC 9 cut(s) 99, 257, 301, 505, 629, 652, 1577, 1959, 2098
BsmI GAATGC 2 cut(s) 1697, 1699
Bso31I GGTCTC 1 cut(s) 296
BsoBI CYCGRG 3 cut(s) 278, 1560, 1587
Bsp1286I GDGCHC 2 cut(s) 611, 1533
Bsp1407I TGTACA 3 cut(s) 1035, 1650, 1959
Bsp143I GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
BspCNI CTCAG 2 cut(s) 652, 1408
BspHI TCATGA 1 cut(s) 2089
BspLI GGNNCC 9 cut(s) 115, 139, 316, 317, 373, 498, 1129, 1920, 1975
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 7 cut(s) 988, 1223, 1301, 1318, 1574, 1772, 2151
BspT107I GGYRCC 2 cut(s) 137, 1918
BspTNI GGTCTC 1 cut(s) 296
BsrBI CCGCTC 2 cut(s) 258, 435
BsrDI GCAATG 1 cut(s) 1835
BsrFI RCCGGY 9 cut(s) 13, 162, 656, 677, 731, 884, 973, 1727, 1967
BsrGI TGTACA 3 cut(s) 1035, 1650, 1959
BsrI ACTGG 4 cut(s) 896, 1686, 1953, 2177
BssAI RCCGGY 9 cut(s) 13, 162, 656, 677, 731, 884, 973, 1727, 1967
BssMI GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
BssNI GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
BssSI CACGAG 2 cut(s) 566, 1703
BssT1I CCWWGG 1 cut(s) 1660
Bst2BI CACGAG 2 cut(s) 566, 1703
Bst2UI CCWGG 7 cut(s) 613, 629, 979, 1172, 1476, 1923, 2068
Bst4CI ACNGT 3 cut(s) 61, 1256, 1897
Bst6I CTCTTC 2 cut(s) 321, 2151
BstACI GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
BstAPI GCANNNNNTGC 2 cut(s) 1111, 1181
BstAUI TGTACA 3 cut(s) 1035, 1650, 1959
BstBAI YACGTR 3 cut(s) 169, 862, 1330
BstDEI CTNAG 3 cut(s) 639, 1015, 1416
BstDSI CCRYGG 1 cut(s) 1410
BstEII GGTNACC 1 cut(s) 1542
BstENI CCTNNNNNAGG 2 cut(s) 326, 1760
BstF5I GGATG 4 cut(s) 243, 811, 1186, 1597
BstH2I RGCGCY 3 cut(s) 141, 689, 1922
BstHHI GCGC 8 cut(s) 140, 688, 1249, 1305, 1474, 1540, 1802, 1921
BstKTI GATC 9 cut(s) 339, 739, 996, 1218, 1309, 1326, 1582, 1780, 2146
BstMAI GTCTC 8 cut(s) 275, 296, 402, 757, 1112, 1197, 1700, 2017
BstMBI GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
BstMCI CGRYCG 1 cut(s) 265
BstNI CCWGG 7 cut(s) 613, 629, 979, 1172, 1476, 1923, 2068
BstNSI RCATGY 2 cut(s) 1227, 1960
BstPI GGTNACC 1 cut(s) 1542
BstSFI CTRYAG 1 cut(s) 758
BstSLI GKGCMC 1 cut(s) 611
BstV1I GCAGC 6 cut(s) 168, 171, 1362, 1679, 1781, 1837
BstV2I GAAGAC 3 cut(s) 121, 554, 1989
BstZI CGGCCG 1 cut(s) 262
BtgI CCRYGG 1 cut(s) 1410
BtrI CACGTC 3 cut(s) 96, 442, 1102
BtsCI GGATG 4 cut(s) 243, 811, 1186, 1597
BtsI GCAGTG 1 cut(s) 1112
BtsIMutI CAGTG 5 cut(s) 1112, 1575, 1679, 1773, 1893
CaiI CAGNNNCTG 3 cut(s) 766, 1009, 1775
CciI TCATGA 1 cut(s) 2089
CfoI GCGC 8 cut(s) 140, 688, 1249, 1305, 1474, 1540, 1802, 1921
Cfr10I RCCGGY 9 cut(s) 13, 162, 656, 677, 731, 884, 973, 1727, 1967
Cfr42I CCGCGG 1 cut(s) 1413
Cfr9I CCCGGG 2 cut(s) 1560, 1587
CseI GACGC 4 cut(s) 447, 626, 1416, 1727
CspAI ACCGGT 1 cut(s) 1727
CspCI CAANNNNNGTGG 2 cut(s) 1951, 1986
DdeI CTNAG 3 cut(s) 639, 1015, 1416
DinI GGCGCC 2 cut(s) 139, 1920
DpnI GATC 9 cut(s) 338, 738, 995, 1217, 1308, 1325, 1581, 1779, 2145
DpnII GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
DraIII CACNNNGTG 1 cut(s) 475
DrdI GACNNNNNNGTC 1 cut(s) 86
DriI GACNNNNNGTC 1 cut(s) 555
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 2 cut(s) 262, 1741
EagI CGGCCG 1 cut(s) 262
Eam1104I CTCTTC 2 cut(s) 321, 2151
Eam1105I GACNNNNNGTC 1 cut(s) 555
EarI CTCTTC 2 cut(s) 321, 2151
EciI GGCGGA 1 cut(s) 696
EclXI CGGCCG 1 cut(s) 262
Eco130I CCWWGG 1 cut(s) 1660
Eco31I GGTCTC 1 cut(s) 296
Eco47I GGWCC 5 cut(s) 113, 315, 331, 496, 1451
Eco52I CGGCCG 1 cut(s) 262
Eco57I CTGAAG 5 cut(s) 361, 566, 953, 2040, 2175
Eco72I CACGTG 2 cut(s) 169, 1330
Eco88I CYCGRG 3 cut(s) 278, 1560, 1587
Eco91I GGTNACC 1 cut(s) 1542
EcoNI CCTNNNNNAGG 2 cut(s) 326, 1760
EcoO109I RGGNCCY 1 cut(s) 315
EcoO65I GGTNACC 1 cut(s) 1542
EcoRII CCWGG 7 cut(s) 611, 627, 977, 1170, 1474, 1921, 2066
EcoT14I CCWWGG 1 cut(s) 1660
EcoT22I ATGCAT 2 cut(s) 1229, 1699
EgeI GGCGCC 2 cut(s) 139, 1920
EheI GGCGCC 2 cut(s) 139, 1920
ErhI CCWWGG 1 cut(s) 1660
Esp3I CGTCTC 2 cut(s) 402, 1700
FalI AAGNNNNNCTT 2 cut(s) 1472, 1504
FaqI GGGAC 9 cut(s) 99, 257, 301, 505, 629, 652, 1577, 1959, 2098
FauI CCCGC 6 cut(s) 124, 1069, 1133, 1137, 1308, 1417
FauNDI CATATG 1 cut(s) 2148
FokI GGATG 4 cut(s) 250, 818, 1193, 1604
FseI GGCCGGCC 1 cut(s) 660
FspBI CTAG 2 cut(s) 384, 1434
GlaI GCGC 8 cut(s) 139, 687, 1248, 1304, 1473, 1539, 1801, 1920
GsaI CCCAGC 1 cut(s) 1139
GsuI CTGGAG 3 cut(s) 437, 1136, 1703
HaeII RGCGCY 3 cut(s) 141, 689, 1922
HgaI GACGC 4 cut(s) 447, 626, 1416, 1727
HhaI GCGC 8 cut(s) 140, 688, 1249, 1305, 1474, 1540, 1802, 1921
Hin1I GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
Hin6I GCGC 8 cut(s) 138, 686, 1247, 1303, 1472, 1538, 1800, 1919
HinP1I GCGC 8 cut(s) 138, 686, 1247, 1303, 1472, 1538, 1800, 1919
HincII GTYRAC 3 cut(s) 560, 592, 1954
HindII GTYRAC 3 cut(s) 560, 592, 1954
HphI GGTGA 5 cut(s) 664, 1288, 1609, 1805, 2140
Hpy99I CGWCG 8 cut(s) 35, 272, 443, 463, 713, 716, 731, 1292
HpyAV CCTTC 4 cut(s) 362, 385, 638, 1545
HpyCH4III ACNGT 3 cut(s) 61, 1256, 1897
HpyCH4V TGCA 5 cut(s) 609, 1105, 1227, 1697, 1812
HpyF3I CTNAG 3 cut(s) 639, 1015, 1416
Hsp92I GRCGYC 6 cut(s) 138, 270, 458, 1719, 1749, 1919
HspAI GCGC 8 cut(s) 138, 686, 1247, 1303, 1472, 1538, 1800, 1919
KasI GGCGCC 2 cut(s) 137, 1918
KflI GGGWCCC 1 cut(s) 315
KroI GCCGGC 5 cut(s) 13, 162, 656, 677, 731
KroNI GCCGGC 5 cut(s) 15, 164, 658, 679, 733
KspI CCGCGG 1 cut(s) 1413
Kzo9I GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
Lsp1109I GCAGC 6 cut(s) 168, 171, 1362, 1679, 1781, 1837
LweI GCATC 4 cut(s) 1171, 1234, 1459, 2126
MaeI CTAG 2 cut(s) 384, 1434
MalI GATC 9 cut(s) 338, 738, 995, 1217, 1308, 1325, 1581, 1779, 2145
MbiI CCGCTC 2 cut(s) 258, 435
MboI GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
MfeI CAATTG 1 cut(s) 1654
MhlI GDGCHC 2 cut(s) 611, 1533
MluCI AATT 4 cut(s) 287, 397, 1654, 2039
MluI ACGCGT 2 cut(s) 618, 1425
Mly113I GGCGCC 2 cut(s) 138, 1919
MlyI GAGTC 6 cut(s) 135, 277, 631, 909, 1114, 2080
MmeI TCCRAC 2 cut(s) 54, 1311
Mph1103I ATGCAT 2 cut(s) 1229, 1699
MreI CGCCGGCG 2 cut(s) 677, 731
MroNI GCCGGC 5 cut(s) 13, 162, 656, 677, 731
MroXI GAANNNNTTC 2 cut(s) 551, 1697
MseI TTAA 5 cut(s) 9, 534, 1092, 1761, 2025
MslI CAYNNNNRTG 1 cut(s) 804
MspA1I CMGCKG 2 cut(s) 405, 1412
MunI CAATTG 1 cut(s) 1654
Mva1269I GAATGC 2 cut(s) 1697, 1699
MvaI CCWGG 7 cut(s) 613, 629, 979, 1172, 1476, 1923, 2068
NaeI GCCGGC 5 cut(s) 15, 164, 658, 679, 733
NarI GGCGCC 2 cut(s) 138, 1919
NdeI CATATG 1 cut(s) 2148
NdeII GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
NgoMIV GCCGGC 5 cut(s) 13, 162, 656, 677, 731
NheI GCTAGC 1 cut(s) 383
NlaIV GGNNCC 9 cut(s) 115, 139, 316, 317, 373, 498, 1129, 1920, 1975
NmeAIII GCCGAG 3 cut(s) 114, 145, 1341
NmuCI GTSAC 8 cut(s) 169, 505, 563, 634, 1745, 1793, 1831, 2128
NsiI ATGCAT 2 cut(s) 1229, 1699
NspI RCATGY 2 cut(s) 1227, 1960
PaeI GCATGC 1 cut(s) 1227
PaeR7I CTCGAG 1 cut(s) 278
PagI TCATGA 1 cut(s) 2089
PciI ACATGT 1 cut(s) 1956
PcsI WCGNNNNNNNCGW 4 cut(s) 276, 345, 477, 1107
PctI GAATGC 2 cut(s) 1697, 1699
PdiI GCCGGC 5 cut(s) 15, 164, 658, 679, 733
PdmI GAANNNNTTC 2 cut(s) 551, 1697
PfeI GAWTC 4 cut(s) 585, 774, 1932, 2111
PflMI CCANNNNNTGG 2 cut(s) 250, 1177
PinAI ACCGGT 1 cut(s) 1727
PleI GAGTC 6 cut(s) 134, 277, 631, 908, 1114, 2080
PluTI GGCGCC 2 cut(s) 141, 1922
PmaCI CACGTG 2 cut(s) 169, 1330
PmlI CACGTG 2 cut(s) 169, 1330
PpsI GAGTC 6 cut(s) 134, 277, 631, 908, 1114, 2080
Ppu21I YACGTR 3 cut(s) 169, 862, 1330
PpuMI RGGWCCY 1 cut(s) 315
PscI ACATGT 1 cut(s) 1956
Psp5II RGGWCCY 1 cut(s) 315
Psp6I CCWGG 7 cut(s) 611, 627, 977, 1170, 1474, 1921, 2066
PspCI CACGTG 2 cut(s) 169, 1330
PspEI GGTNACC 1 cut(s) 1542
PspFI CCCAGC 1 cut(s) 1135
PspGI CCWGG 7 cut(s) 611, 627, 977, 1170, 1474, 1921, 2066
PspN4I GGNNCC 9 cut(s) 115, 139, 316, 317, 373, 498, 1129, 1920, 1975
PspPPI RGGWCCY 1 cut(s) 315
PsrI GAACNNNNNNTAC 2 cut(s) 335, 367
PstNI CAGNNNCTG 3 cut(s) 766, 1009, 1775
RigI GGCCGGCC 1 cut(s) 660
RseI CAYNNNNRTG 1 cut(s) 804
SacII CCGCGG 1 cut(s) 1413
SaqAI TTAA 5 cut(s) 9, 534, 1092, 1761, 2025
Sau3AI GATC 9 cut(s) 336, 736, 993, 1215, 1306, 1323, 1579, 1777, 2143
SchI GAGTC 6 cut(s) 135, 277, 631, 909, 1114, 2080
SduI GDGCHC 2 cut(s) 611, 1533
SfaNI GCATC 4 cut(s) 1171, 1234, 1459, 2126
SfcI CTRYAG 1 cut(s) 758
SfiI GGCCNNNNNGGCC 1 cut(s) 261
SfoI GGCGCC 2 cut(s) 139, 1920
Sfr274I CTCGAG 1 cut(s) 278
Sfr303I CCGCGG 1 cut(s) 1413
SgrAI CRCCGGYG 2 cut(s) 677, 731
SgrBI CCGCGG 1 cut(s) 1413
SinI GGWCC 5 cut(s) 113, 315, 331, 496, 1451
SlaI CTCGAG 1 cut(s) 278
SmaI CCCGGG 2 cut(s) 1562, 1589
SmiMI CAYNNNNRTG 1 cut(s) 804
SmlI CTYRAG 3 cut(s) 278, 662, 1987
SmoI CTYRAG 3 cut(s) 278, 662, 1987
SphI GCATGC 1 cut(s) 1227
Sse9I AATT 4 cut(s) 287, 397, 1654, 2039
SspDI GGCGCC 2 cut(s) 137, 1918
SspMI CTAG 2 cut(s) 384, 1434
StyI CCWWGG 1 cut(s) 1660
TaaI ACNGT 3 cut(s) 61, 1256, 1897
TasI AATT 4 cut(s) 287, 397, 1654, 2039
TatI WGTACW 6 cut(s) 1035, 1251, 1629, 1650, 1959, 2170
TauI GCSGC 8 cut(s) 143, 258, 267, 438, 458, 691, 1337, 1415
TfiI GAWTC 4 cut(s) 585, 774, 1932, 2111
Tru1I TTAA 5 cut(s) 9, 534, 1092, 1761, 2025
Tru9I TTAA 5 cut(s) 9, 534, 1092, 1761, 2025
TscAI CASTG 5 cut(s) 1112, 1582, 1686, 1780, 1900
TseFI GTSAC 8 cut(s) 169, 505, 563, 634, 1745, 1793, 1831, 2128
TseI GCWGC 6 cut(s) 156, 159, 1375, 1667, 1769, 1850
Tsp45I GTSAC 8 cut(s) 169, 505, 563, 634, 1745, 1793, 1831, 2128
TspDTI ATGAA 2 cut(s) 196, 1637
TspGWI ACGGA 5 cut(s) 509, 530, 545, 715, 1001
TspMI CCCGGG 2 cut(s) 1560, 1587
TspRI CASTG 5 cut(s) 1112, 1582, 1686, 1780, 1900
Van91I CCANNNNNTGG 2 cut(s) 250, 1177
VneI GTGCAC 1 cut(s) 607
VpaK11BI GGWCC 5 cut(s) 113, 315, 331, 496, 1451
XagI CCTNNNNNAGG 2 cut(s) 326, 1760
XapI RAATTY 1 cut(s) 2039
XceI RCATGY 2 cut(s) 1227, 1960
XcmI CCANNNNNNNNNTGG 1 cut(s) 1912
XhoI CTCGAG 1 cut(s) 278
XmaI CCCGGG 2 cut(s) 1560, 1587
XmnI GAANNNNTTC 2 cut(s) 551, 1697
XspI CTAG 2 cut(s) 384, 1434
ZraI GACGTC 2 cut(s) 271, 1750
Zsp2I ATGCAT 2 cut(s) 1229, 1699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.