Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000717

Physical Location & Seq

Genomic Coordinates Forward (+)

32347519 .. 32351946

Gene Structure 4428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00240560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGTCAAGCTTGGAGAAGCCACTTGTTTTTGATAGGATTCAGGAATTCTCTTCTAGTGTTTGCAGGTCAAGAAGAGCAGATGATGTTGAAGAAGGAACAAGATGTAGCACATCCAGTAGCCGCGAAGAAGAGTATACAAGAGACTACTTCTCTTTCAGCAAAAAGACTTTGAGCTTTGGCAGGAATCACAAGGTTTTCAGAAATAGTTTTGAATCATGGTTCTTGCCAGATGATCAATATAACTCCAAGACCAATTGCAATGGAAAAGATGCAACACGTAAGTTCCTGAACGGAATAGCATTACCAAAGTTTGTTAAGATAGTAGAAGTAGGTCCAAGAGACGGTCTACAAAATGAGAAGAAGATCGTATCTGCAGCTATAAAGATTGAGCTGATTCATAGGCTGATTTCTTCTGGGTTGTCTGTTGTTGAGGCTACAAGTTTTGTATCACCCAAATGGGTTCCTCAGCTAGCAGATGCAAAGGATGTAATGGAAGCGGTTCGCAATCTCGAGGGTAGTGCTACATTGCCTGTTCTGACACCTAATTTGAAAGGATTTGAAGCAGCTGTTGCAGCTGGTGCTAAGGTCGTAGCAGTCTTTGCATCAGCTTCCGAGTCATTTTCAAAGGCGAACATCAATTGTAGCATAGAAGAAAGTCTTGTTCGTTACCGAGCTGTTACTCGTGCTGCAAAGGAGCTTTCCATTCCTGTTCGAGGGTATGTATCATGTGCCATTGGATGTCCAGAAGAGGGAGCAATTCCCCCATCAAAAGTAGCATATGTGGCAAAACAACTCTATGACATGGGCTGCTTTGAAATTTCTCTTGCCGACACGACCGGAATTGGTACCCCAACGACGGTTGTGCCAATGCTCGAAGCTGTGATGGCTGTTGTTCCTGCTGAGAAGCTAGCTGTTCATTTCCATGACACGTACGGGCAATCTCTTCCAAATATTTTAGTCTCTCTTCAAATGGGGATTGGCACGGTCGACTCCTCTGTTGCAGGTTTAGGTGGGTGTCCATATGCCAAGGGCGCTTCGGGTAACGTTGCCACTGAAGATGTTGTATACATGCTTAGCGAACTTGGTGTGGAAACCAATGTGGATTTGGCCAAGCTCCTGGTGGCTGGTGATTTCATCAGCAGGCATTTAGGTCGCCCGTCTGGTTCAAAGATCGCCATTGCCTCGAGTCCTGTTAAAGCTGATGACTCTAAGAACTATGCGAGTATCTCCAGAAAAGCGATGAACGAATCCCAAAACTGTGCACAGAAGCAGCCTTATTCCACCTCCATCATTAATCACTTTATCCTTTTCGAACCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004419 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0016829 GO:0016830 GO:0016833 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872

KEGG Pathways

Metabolic & Signaling

ko00072 ko00280 ko00281 ko00650 ko01100 ko04146 map00072 map00280 map00281 map00650 map01100 map04146

Pfam Domains

Protein Families

HMGL-like

Protein Analysis

440

Amino Acids

47.48

Weight (kDa)

7.0

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMGL-like	PF00682	105 - 378	7.6e-57	HMGL-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26800 AT2G26800 AT2G26800 AT2G26800 AT2G26800
fragaria_vesca	FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_1g30200 FvH4_5g27390
malus_domestica	MD03G1157200.v1.1 MD11G1183500.v1.1 MD12G1006800.v1.1 MD12G1094600.v1.1 MD15G1420700.v1.1
prunus_persica	Prupe.4G270500_v2.0.a1 Prupe.4G270500_v2.0.a1 Prupe.4G270500_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1 Prupe.7G031100_v2.0.a1
pyrus_communis	pycom12561g00230 pycom13g09650 pycom5153684g00060
rosa_chinensis	RchiOBHm_Chr3g0491291 RchiOBHm_Chr3g0491331 RchiOBHm_Chr3g0491351 RchiOBHm_Chr7g0218661
rosa_laevigata	RLG00000022846
rosa_multiflora	Rmu_co8125388.1_g000001 Rmu_co8321319.1_g000001 Rmu_sc0000293.1_g000014 Rmu_sc0000293.1_g000032 Rmu_sc0001301.1_g000016 Rmu_sc0005784.1_g000018 Rmu_sc0014162.1_g000014 Rmu_sc0014162.1_g000023
rosa_roxburghii	Rroxscaffold_2G00115200 Rroxscaffold_3G00240560 Rroxscaffold_6G00392960 Rroxscaffold_6G00392970 Rroxscaffold_6G00392980
rosa_rugosa	Rorug03G0248700 Rorug07G0179100
rosa_samantha	Rh3AG298000 Rh3AG298300 Rh3BG334100 Rh3CG331100 Rh3DG331900 Rh3DG332300 Rh3DG332600 Rh7AG320300 Rh7BG313100 Rh7CG337200 Rh7DG319300
rosa_wichuraiana	Rw3G026240 Rw3G026310 Rw7G026890 Rw7G027280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	54, 992
Acc65I	GGTACC	1 cut(s)	845
AccB1I	GGYRCC	1 cut(s)	845
AccI	GTMKAC	4 cut(s)	134, 346, 987, 1065
AccII	CGCG	1 cut(s)	123
AciI	CCGC	2 cut(s)	121, 497
AclI	AACGTT	1 cut(s)	1044
AcoI	YGGCCR	1 cut(s)	1107
AcsI	RAATTY	2 cut(s)	44, 816
AcuI	CTGAAG	1 cut(s)	1074
AfaI	GTAC	2 cut(s)	847, 932
AfiI	CCNNNNNNNGG	4 cut(s)	341, 713, 749, 856
AflIII	ACRYGT	2 cut(s)	275, 927
AgsI	TTSAA	8 cut(s)	89, 212, 550, 560, 624, 815, 968, 1167
AjnI	CCWGG	1 cut(s)	1116
Alw21I	GWGCWC	1 cut(s)	1264
Alw26I	GTCTC	3 cut(s)	135, 333, 964
Alw44I	GTGCAC	1 cut(s)	1260
Ama87I	CYCGRG	2 cut(s)	509, 1183
AoxI	GGCC	1 cut(s)	1107
ApaLI	GTGCAC	1 cut(s)	1260
ApeKI	GCWGC	6 cut(s)	374, 563, 572, 686, 807, 1270
ApoI	RAATTY	2 cut(s)	44, 816
ArsI	GACNNNNNNTTYG	2 cut(s)	529, 561
AseI	ATTAAT	1 cut(s)	1293
Asp700I	GAANNNNTTC	1 cut(s)	498
Asp718I	GGTACC	1 cut(s)	845
AspLEI	GCGC	1 cut(s)	1034
AspS9I	GGNCC	1 cut(s)	332
AsuHPI	GGTGA	2 cut(s)	441, 1139
AsuII	TTCGAA	1 cut(s)	1311
AsuNHI	GCTAGC	2 cut(s)	469, 907
AvaI	CYCGRG	2 cut(s)	509, 1183
AvaII	GGWCC	1 cut(s)	332
BaeGI	GKGCMC	1 cut(s)	1264
BalI	TGGCCA	1 cut(s)	1109
BanI	GGYRCC	1 cut(s)	845
BauI	CACGAG	1 cut(s)	681
Bbv12I	GWGCWC	1 cut(s)	1264
BbvCI	CCTCAGC	1 cut(s)	465
BbvI	GCAGC	6 cut(s)	386, 575, 584, 673, 794, 1282
BccI	CCATC	3 cut(s)	772, 877, 1295
BcgI	CGANNNNNNTGC	6 cut(s)	500, 534, 844, 878, 1133, 1167
BciT130I	CCWGG	1 cut(s)	1118
BclI	TGATCA	1 cut(s)	232
BcoDI	GTCTC	3 cut(s)	135, 333, 964
BfaI	CTAG	3 cut(s)	54, 470, 908
BfmI	CTRYAG	1 cut(s)	372
BfoI	RGCGCY	1 cut(s)	1035
BfuAI	ACCTGC	2 cut(s)	54, 992
BisI	GCNGC	7 cut(s)	121, 375, 564, 573, 687, 808, 1271
BlpI	GCTNAGC	1 cut(s)	1073
BlsI	GCNGC	7 cut(s)	122, 376, 565, 574, 688, 809, 1272
Bme1390I	CCNGG	1 cut(s)	1118
Bme18I	GGWCC	1 cut(s)	332
BmeT110I	CYCGRG	2 cut(s)	509, 1183
BmgT120I	GGNCC	1 cut(s)	332
BmiI	GGNNCC	2 cut(s)	462, 847
BmrFI	CCNGG	1 cut(s)	1118
BmsI	GCATC	3 cut(s)	259, 466, 611
BmtI	GCTAGC	2 cut(s)	473, 911
BpmI	CTGGAG	1 cut(s)	1213
Bpu10I	CCTNAGC	2 cut(s)	465, 582
Bpu1102I	GCTNAGC	1 cut(s)	1073
Bpu14I	TTCGAA	1 cut(s)	1311
BsaAI	YACGTR	2 cut(s)	278, 930
BsaJI	CCNNGG	1 cut(s)	1026
BsaWI	WCCGGW	1 cut(s)	836
Bsc4I	CCNNNNNNNGG	4 cut(s)	341, 713, 749, 856
Bse1I	ACTGG	1 cut(s)	114
Bse3DI	GCAATG	3 cut(s)	265, 524, 1176
BseBI	CCWGG	1 cut(s)	1118
BseDI	CCNNGG	1 cut(s)	1026
BseGI	GGATG	3 cut(s)	110, 490, 743
BseLI	CCNNNNNNNGG	4 cut(s)	341, 713, 749, 856
BseMI	GCAATG	3 cut(s)	265, 524, 1176
BseMII	CTCAG	2 cut(s)	479, 891
BseNI	ACTGG	1 cut(s)	114
BseRI	GAGGAG	1 cut(s)	982
BseSI	GKGCMC	1 cut(s)	1264
BseXI	GCAGC	6 cut(s)	386, 575, 584, 673, 794, 1282
Bsh1236I	CGCG	1 cut(s)	123
Bsh1285I	CGRYCG	2 cut(s)	837, 987
BshFI	GGCC	1 cut(s)	1109
BshNI	GGYRCC	1 cut(s)	845
BsiEI	CGRYCG	2 cut(s)	837, 987
BsiHKAI	GWGCWC	1 cut(s)	1264
BsiHKCI	CYCGRG	2 cut(s)	509, 1183
BsiSI	CCGG	1 cut(s)	837
BsiWI	CGTACG	1 cut(s)	930
BslI	CCNNNNNNNGG	4 cut(s)	341, 713, 749, 856
BsmAI	GTCTC	3 cut(s)	135, 333, 964
BsmBI	CGTCTC	1 cut(s)	333
BsnI	GGCC	1 cut(s)	1109
BsoBI	CYCGRG	2 cut(s)	509, 1183
Bsp119I	TTCGAA	1 cut(s)	1311
Bsp1286I	GDGCHC	1 cut(s)	1264
Bsp143I	GATC	3 cut(s)	232, 363, 1170
Bsp1720I	GCTNAGC	1 cut(s)	1073
BspACI	CCGC	2 cut(s)	121, 497
BspANI	GGCC	1 cut(s)	1109
BspCNI	CTCAG	2 cut(s)	478, 892
BspFNI	CGCG	1 cut(s)	123
BspLI	GGNNCC	2 cut(s)	462, 847
BspMAI	CTGCAG	1 cut(s)	376
BspMI	ACCTGC	2 cut(s)	54, 992
BspOI	GCTAGC	2 cut(s)	473, 911
BspQI	GCTCTTC	1 cut(s)	67
BspT104I	TTCGAA	1 cut(s)	1311
BspT107I	GGYRCC	1 cut(s)	845
BsrDI	GCAATG	3 cut(s)	265, 524, 1176
BsrI	ACTGG	1 cut(s)	114
BssECI	CCNNGG	1 cut(s)	1026
BssMI	GATC	3 cut(s)	232, 363, 1170
BssNAI	GTATAC	2 cut(s)	135, 1066
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	1 cut(s)	1026
Bst1107I	GTATAC	2 cut(s)	135, 1066
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	1 cut(s)	1118
Bst4CI	ACNGT	4 cut(s)	344, 859, 985, 1259
Bst6I	CTCTTC	6 cut(s)	55, 67, 123, 741, 948, 969
BstAPI	GCANNNNNTGC	3 cut(s)	569, 578, 599
BstBAI	YACGTR	2 cut(s)	278, 930
BstBI	TTCGAA	1 cut(s)	1311
BstC8I	GCNNGC	3 cut(s)	471, 909, 1142
BstDEI	CTNAG	5 cut(s)	465, 582, 900, 1073, 1209
BstENI	CCTNNNNNAGG	1 cut(s)	711
BstF5I	GGATG	3 cut(s)	110, 490, 743
BstFNI	CGCG	1 cut(s)	123
BstH2I	RGCGCY	1 cut(s)	1035
BstHHI	GCGC	1 cut(s)	1034
BstKTI	GATC	3 cut(s)	235, 366, 1173
BstMAI	GTCTC	3 cut(s)	135, 333, 964
BstMBI	GATC	3 cut(s)	232, 363, 1170
BstMCI	CGRYCG	2 cut(s)	837, 987
BstMWI	GCNNNNNNNGC	7 cut(s)	569, 572, 578, 599, 782, 884, 1031
BstNI	CCWGG	1 cut(s)	1118
BstNSI	RCATGY	1 cut(s)	1072
BstSCI	CCNGG	1 cut(s)	1116
BstSFI	CTRYAG	1 cut(s)	372
BstSLI	GKGCMC	1 cut(s)	1264
BstUI	CGCG	1 cut(s)	123
BstV1I	GCAGC	6 cut(s)	386, 575, 584, 673, 794, 1282
BstXI	CCANNNNNNTGG	1 cut(s)	1117
BstZ17I	GTATAC	2 cut(s)	135, 1066
BsuRI	GGCC	1 cut(s)	1109
BtgZI	GCGATG	1 cut(s)	1253
BtsCI	GGATG	3 cut(s)	110, 490, 743
BtsIMutI	CAGTG	1 cut(s)	1050
BveI	ACCTGC	2 cut(s)	54, 992
Cac8I	GCNNGC	3 cut(s)	471, 909, 1142
CfoI	GCGC	1 cut(s)	1034
Cfr13I	GGNCC	1 cut(s)	332
Csp6I	GTAC	2 cut(s)	846, 931
CviAII	CATG	5 cut(s)	216, 726, 802, 923, 1069
CviQI	GTAC	2 cut(s)	846, 931
DdeI	CTNAG	5 cut(s)	465, 582, 900, 1073, 1209
DpnI	GATC	3 cut(s)	234, 365, 1172
DpnII	GATC	3 cut(s)	232, 363, 1170
EaeI	YGGCCR	1 cut(s)	1107
Eam1104I	CTCTTC	6 cut(s)	55, 67, 123, 741, 948, 969
EarI	CTCTTC	6 cut(s)	55, 67, 123, 741, 948, 969
Eco130I	CCWWGG	1 cut(s)	1026
Eco47I	GGWCC	1 cut(s)	332
Eco57I	CTGAAG	1 cut(s)	1074
Eco88I	CYCGRG	2 cut(s)	509, 1183
EcoNI	CCTNNNNNAGG	1 cut(s)	711
EcoRI	GAATTC	1 cut(s)	44
EcoRII	CCWGG	1 cut(s)	1116
EcoT14I	CCWWGG	1 cut(s)	1026
ErhI	CCWWGG	1 cut(s)	1026
Esp3I	CGTCTC	1 cut(s)	333
FaeI	CATG	5 cut(s)	219, 729, 805, 926, 1072
FalI	AAGNNNNNCTT	2 cut(s)	642, 674
FatI	CATG	5 cut(s)	215, 725, 801, 922, 1068
FauNDI	CATATG	2 cut(s)	778, 1021
FbaI	TGATCA	1 cut(s)	232
FblI	GTMKAC	4 cut(s)	134, 346, 987, 1065
Fnu4HI	GCNGC	7 cut(s)	121, 375, 564, 573, 687, 808, 1271
FokI	GGATG	3 cut(s)	97, 497, 750
Fsp4HI	GCNGC	7 cut(s)	121, 375, 564, 573, 687, 808, 1271
FspBI	CTAG	3 cut(s)	54, 470, 908
GlaI	GCGC	1 cut(s)	1033
GluI	GCNGC	7 cut(s)	121, 375, 564, 573, 687, 808, 1271
GsuI	CTGGAG	1 cut(s)	1213
HaeII	RGCGCY	1 cut(s)	1035
HaeIII	GGCC	1 cut(s)	1109
HapII	CCGG	1 cut(s)	837
HhaI	GCGC	1 cut(s)	1034
Hin1II	CATG	5 cut(s)	219, 729, 805, 926, 1072
Hin6I	GCGC	1 cut(s)	1032
HinP1I	GCGC	1 cut(s)	1032
HincII	GTYRAC	1 cut(s)	988
HindII	GTYRAC	1 cut(s)	988
HindIII	AAGCTT	1 cut(s)	7
HinfI	GANTC	9 cut(s)	37, 184, 212, 394, 614, 989, 1186, 1205, 1247
HpaII	CCGG	1 cut(s)	837
HphI	GGTGA	2 cut(s)	441, 1139
Hpy166II	GTNNAC	5 cut(s)	135, 347, 988, 1066, 1262
Hpy188I	TCNGA	3 cut(s)	200, 537, 613
Hpy188III	TCNNGA	6 cut(s)	41, 69, 286, 509, 743, 1230
Hpy8I	GTNNAC	5 cut(s)	135, 347, 988, 1066, 1262
Hpy99I	CGWCG	1 cut(s)	859
HpyAV	CCTTC	1 cut(s)	86
HpyCH4III	ACNGT	4 cut(s)	344, 859, 985, 1259
HpyCH4IV	ACGT	3 cut(s)	277, 929, 1044
HpyF10VI	GCNNNNNNNGC	7 cut(s)	569, 572, 578, 599, 782, 884, 1031
HpyF3I	CTNAG	5 cut(s)	465, 582, 900, 1073, 1209
HpySE526I	ACGT	3 cut(s)	277, 929, 1044
Hsp92II	CATG	5 cut(s)	219, 729, 805, 926, 1072
HspAI	GCGC	1 cut(s)	1032
KpnI	GGTACC	1 cut(s)	849
Ksp22I	TGATCA	1 cut(s)	232
Kzo9I	GATC	3 cut(s)	232, 363, 1170
LguI	GCTCTTC	1 cut(s)	67
LmnI	GCTCC	3 cut(s)	694, 752, 1119
Lsp1109I	GCAGC	6 cut(s)	386, 575, 584, 673, 794, 1282
LweI	GCATC	3 cut(s)	259, 466, 611
MaeI	CTAG	3 cut(s)	54, 470, 908
MaeII	ACGT	3 cut(s)	277, 929, 1044
MaeIII	GTNAC	3 cut(s)	665, 676, 1040
MalI	GATC	3 cut(s)	234, 365, 1172
MboI	GATC	3 cut(s)	232, 363, 1170
MfeI	CAATTG	2 cut(s)	253, 637
MhlI	GDGCHC	1 cut(s)	1264
MlsI	TGGCCA	1 cut(s)	1109
MluCI	AATT	7 cut(s)	44, 253, 544, 637, 756, 816, 840
MluNI	TGGCCA	1 cut(s)	1109
MlyI	GAGTC	4 cut(s)	623, 983, 1195, 1199
MnlI	CCTC	8 cut(s)	424, 474, 505, 707, 742, 1003, 1192, 1294
Mox20I	TGGCCA	1 cut(s)	1109
MroXI	GAANNNNTTC	1 cut(s)	498
MscI	TGGCCA	1 cut(s)	1109
MseI	TTAA	4 cut(s)	315, 1194, 1293, 1321
MslI	CAYNNNNRTG	2 cut(s)	454, 921
Msp20I	TGGCCA	1 cut(s)	1109
MspA1I	CMGCKG	2 cut(s)	566, 575
MspI	CCGG	1 cut(s)	837
MspR9I	CCNGG	1 cut(s)	1118
MunI	CAATTG	2 cut(s)	253, 637
MvaI	CCWGG	1 cut(s)	1118
MvnI	CGCG	1 cut(s)	123
MwoI	GCNNNNNNNGC	7 cut(s)	569, 572, 578, 599, 782, 884, 1031
NdeI	CATATG	2 cut(s)	778, 1021
NdeII	GATC	3 cut(s)	232, 363, 1170
NheI	GCTAGC	2 cut(s)	469, 907
NlaIII	CATG	5 cut(s)	219, 729, 805, 926, 1072
NlaIV	GGNNCC	2 cut(s)	462, 847
NspI	RCATGY	1 cut(s)	1072
NspV	TTCGAA	1 cut(s)	1311
PaeR7I	CTCGAG	2 cut(s)	509, 1183
PciSI	GCTCTTC	1 cut(s)	67
PdmI	GAANNNNTTC	1 cut(s)	498
PfeI	GAWTC	5 cut(s)	37, 184, 212, 394, 1247
Pfl23II	CGTACG	1 cut(s)	930
PkrI	GCNGC	7 cut(s)	122, 376, 565, 574, 688, 809, 1272
PleI	GAGTC	4 cut(s)	622, 983, 1194, 1199
PpsI	GAGTC	4 cut(s)	622, 983, 1194, 1199
Ppu21I	YACGTR	2 cut(s)	278, 930
PshBI	ATTAAT	1 cut(s)	1293
Psp1406I	AACGTT	1 cut(s)	1044
Psp6I	CCWGG	1 cut(s)	1116
PspGI	CCWGG	1 cut(s)	1116
PspLI	CGTACG	1 cut(s)	930
PspN4I	GGNNCC	2 cut(s)	462, 847
PspPI	GGNCC	1 cut(s)	332
PspXI	VCTCGAGB	1 cut(s)	1183
PstI	CTGCAG	1 cut(s)	376
PvuII	CAGCTG	2 cut(s)	566, 575
RsaI	GTAC	2 cut(s)	847, 932
RsaNI	GTAC	2 cut(s)	846, 931
RseI	CAYNNNNRTG	2 cut(s)	454, 921
SalI	GTCGAC	1 cut(s)	986
SapI	GCTCTTC	1 cut(s)	67
SaqAI	TTAA	4 cut(s)	315, 1194, 1293, 1321
SatI	GCNGC	7 cut(s)	121, 375, 564, 573, 687, 808, 1271
Sau3AI	GATC	3 cut(s)	232, 363, 1170
Sau96I	GGNCC	1 cut(s)	332
SchI	GAGTC	4 cut(s)	623, 983, 1195, 1199
ScrFI	CCNGG	1 cut(s)	1118
SduI	GDGCHC	1 cut(s)	1264
SfaNI	GCATC	3 cut(s)	259, 466, 611
SfcI	CTRYAG	1 cut(s)	372
Sfr274I	CTCGAG	2 cut(s)	509, 1183
SfuI	TTCGAA	1 cut(s)	1311
SinI	GGWCC	1 cut(s)	332
SlaI	CTCGAG	2 cut(s)	509, 1183
SmiMI	CAYNNNNRTG	2 cut(s)	454, 921
SmlI	CTYRAG	2 cut(s)	509, 1183
SmoI	CTYRAG	2 cut(s)	509, 1183
Sse9I	AATT	7 cut(s)	44, 253, 544, 637, 756, 816, 840
SsiI	CCGC	2 cut(s)	121, 497
SspI	AATATT	1 cut(s)	952
SspMI	CTAG	3 cut(s)	54, 470, 908
StyD4I	CCNGG	1 cut(s)	1116
StyI	CCWWGG	1 cut(s)	1026
TaaI	ACNGT	4 cut(s)	344, 859, 985, 1259
TaiI	ACGT	3 cut(s)	280, 932, 1047
TaqI	TCGA	6 cut(s)	510, 712, 873, 987, 1184, 1311
TasI	AATT	7 cut(s)	44, 253, 544, 637, 756, 816, 840
TauI	GCSGC	1 cut(s)	123
TfiI	GAWTC	5 cut(s)	37, 184, 212, 394, 1247
Tru1I	TTAA	4 cut(s)	315, 1194, 1293, 1321
Tru9I	TTAA	4 cut(s)	315, 1194, 1293, 1321
TscAI	CASTG	1 cut(s)	1057
TseI	GCWGC	6 cut(s)	374, 563, 572, 686, 807, 1270
TspDTI	ATGAA	4 cut(s)	386, 905, 1123, 1256
TspGWI	ACGGA	1 cut(s)	306
TspRI	CASTG	1 cut(s)	1057
VneI	GTGCAC	1 cut(s)	1260
VpaK11BI	GGWCC	1 cut(s)	332
VspI	ATTAAT	1 cut(s)	1293
XagI	CCTNNNNNAGG	1 cut(s)	711
XapI	RAATTY	2 cut(s)	44, 816
XceI	RCATGY	1 cut(s)	1072
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1102, 1117
XhoI	CTCGAG	2 cut(s)	509, 1183
XmiI	GTMKAC	4 cut(s)	134, 346, 987, 1065
XmnI	GAANNNNTTC	1 cut(s)	498
XspI	CTAG	3 cut(s)	54, 470, 908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.