Hydroxymethylglutaryl-CoA lyase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HMGL-like | PF00682 | 94 - 367 | 4.8e-56 | HMGL-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 54, 959 |
| Acc65I | GGTACC | 1 cut(s) | 812 |
| AccB1I | GGYRCC | 1 cut(s) | 812 |
| AccI | GTMKAC | 3 cut(s) | 313, 954, 1032 |
| AccII | CGCG | 1 cut(s) | 123 |
| AciI | CCGC | 2 cut(s) | 121, 464 |
| AclI | AACGTT | 1 cut(s) | 1011 |
| AcoI | YGGCCR | 1 cut(s) | 1074 |
| AcsI | RAATTY | 2 cut(s) | 44, 783 |
| AcuI | CTGAAG | 1 cut(s) | 1041 |
| AcyI | GRCGYC | 1 cut(s) | 506 |
| AfaI | GTAC | 2 cut(s) | 814, 899 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 308, 680, 716, 823 |
| AflIII | ACRYGT | 1 cut(s) | 242 |
| AgsI | TTSAA | 9 cut(s) | 89, 179, 517, 527, 591, 782, 842, 935, 1134 |
| AjnI | CCWGG | 1 cut(s) | 1083 |
| Alw26I | GTCTC | 1 cut(s) | 300 |
| Ama87I | CYCGRG | 2 cut(s) | 476, 1150 |
| AoxI | GGCC | 1 cut(s) | 1074 |
| ApeKI | GCWGC | 4 cut(s) | 530, 539, 653, 774 |
| ApoI | RAATTY | 2 cut(s) | 44, 783 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 496, 528 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 465 |
| Asp718I | GGTACC | 1 cut(s) | 812 |
| AspS9I | GGNCC | 1 cut(s) | 299 |
| AsuHPI | GGTGA | 2 cut(s) | 408, 1106 |
| AsuNHI | GCTAGC | 2 cut(s) | 436, 874 |
| AvaI | CYCGRG | 2 cut(s) | 476, 1150 |
| AvaII | GGWCC | 1 cut(s) | 299 |
| BalI | TGGCCA | 1 cut(s) | 1076 |
| BanI | GGYRCC | 1 cut(s) | 812 |
| BauI | CACGAG | 1 cut(s) | 648 |
| BbvCI | CCTCAGC | 1 cut(s) | 432 |
| BbvI | GCAGC | 4 cut(s) | 542, 551, 640, 761 |
| BccI | CCATC | 2 cut(s) | 739, 844 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 467, 501, 811, 845, 1100, 1134 |
| BciT130I | CCWGG | 1 cut(s) | 1085 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcoDI | GTCTC | 1 cut(s) | 300 |
| BfaI | CTAG | 3 cut(s) | 54, 437, 875 |
| BfuAI | ACCTGC | 2 cut(s) | 54, 959 |
| BisI | GCNGC | 5 cut(s) | 121, 531, 540, 654, 775 |
| BlsI | GCNGC | 5 cut(s) | 122, 532, 541, 655, 776 |
| Bme1390I | CCNGG | 1 cut(s) | 1085 |
| Bme18I | GGWCC | 1 cut(s) | 299 |
| BmeT110I | CYCGRG | 2 cut(s) | 476, 1150 |
| BmgT120I | GGNCC | 1 cut(s) | 299 |
| BmiI | GGNNCC | 2 cut(s) | 429, 814 |
| BmrFI | CCNGG | 1 cut(s) | 1085 |
| BmsI | GCATC | 3 cut(s) | 226, 433, 578 |
| BmtI | GCTAGC | 2 cut(s) | 440, 878 |
| Bpu10I | CCTNAGC | 2 cut(s) | 432, 549 |
| BsaAI | YACGTR | 2 cut(s) | 245, 897 |
| BsaHI | GRCGYC | 1 cut(s) | 506 |
| BsaJI | CCNNGG | 1 cut(s) | 993 |
| BsaWI | WCCGGW | 2 cut(s) | 803, 1004 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 308, 680, 716, 823 |
| Bse3DI | GCAATG | 3 cut(s) | 232, 491, 1143 |
| BseBI | CCWGG | 1 cut(s) | 1085 |
| BseDI | CCNNGG | 1 cut(s) | 993 |
| BseGI | GGATG | 3 cut(s) | 110, 457, 710 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 308, 680, 716, 823 |
| BseMI | GCAATG | 3 cut(s) | 232, 491, 1143 |
| BseMII | CTCAG | 1 cut(s) | 446 |
| BseRI | GAGGAG | 1 cut(s) | 949 |
| BseXI | GCAGC | 4 cut(s) | 542, 551, 640, 761 |
| Bsh1236I | CGCG | 1 cut(s) | 123 |
| Bsh1285I | CGRYCG | 1 cut(s) | 804 |
| BshFI | GGCC | 1 cut(s) | 1076 |
| BshNI | GGYRCC | 1 cut(s) | 812 |
| BsiEI | CGRYCG | 1 cut(s) | 804 |
| BsiHKCI | CYCGRG | 2 cut(s) | 476, 1150 |
| BsiSI | CCGG | 2 cut(s) | 804, 1005 |
| BsiWI | CGTACG | 1 cut(s) | 897 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 308, 680, 716, 823 |
| BsmAI | GTCTC | 1 cut(s) | 300 |
| BsmBI | CGTCTC | 1 cut(s) | 300 |
| BsmI | GAATGC | 1 cut(s) | 904 |
| BsnI | GGCC | 1 cut(s) | 1076 |
| BsoBI | CYCGRG | 2 cut(s) | 476, 1150 |
| Bsp143I | GATC | 3 cut(s) | 199, 330, 1137 |
| BspACI | CCGC | 2 cut(s) | 121, 464 |
| BspANI | GGCC | 1 cut(s) | 1076 |
| BspCNI | CTCAG | 1 cut(s) | 445 |
| BspFNI | CGCG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 2 cut(s) | 429, 814 |
| BspMI | ACCTGC | 2 cut(s) | 54, 959 |
| BspOI | GCTAGC | 2 cut(s) | 440, 878 |
| BspQI | GCTCTTC | 1 cut(s) | 67 |
| BspT107I | GGYRCC | 1 cut(s) | 812 |
| BsrDI | GCAATG | 3 cut(s) | 232, 491, 1143 |
| BssECI | CCNNGG | 1 cut(s) | 993 |
| BssMI | GATC | 3 cut(s) | 199, 330, 1137 |
| BssNAI | GTATAC | 1 cut(s) | 1033 |
| BssNI | GRCGYC | 1 cut(s) | 506 |
| BssSI | CACGAG | 1 cut(s) | 648 |
| BssT1I | CCWWGG | 1 cut(s) | 993 |
| Bst1107I | GTATAC | 1 cut(s) | 1033 |
| Bst2BI | CACGAG | 1 cut(s) | 648 |
| Bst2UI | CCWGG | 1 cut(s) | 1085 |
| Bst4CI | ACNGT | 3 cut(s) | 311, 826, 952 |
| Bst6I | CTCTTC | 6 cut(s) | 55, 67, 612, 708, 915, 936 |
| BstACI | GRCGYC | 1 cut(s) | 506 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 536, 545, 566 |
| BstBAI | YACGTR | 2 cut(s) | 245, 897 |
| BstC8I | GCNNGC | 3 cut(s) | 438, 876, 1109 |
| BstDEI | CTNAG | 4 cut(s) | 432, 549, 1040, 1176 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 678 |
| BstF5I | GGATG | 3 cut(s) | 110, 457, 710 |
| BstFNI | CGCG | 1 cut(s) | 123 |
| BstKTI | GATC | 3 cut(s) | 202, 333, 1140 |
| BstMAI | GTCTC | 1 cut(s) | 300 |
| BstMBI | GATC | 3 cut(s) | 199, 330, 1137 |
| BstMCI | CGRYCG | 1 cut(s) | 804 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 536, 539, 545, 566, 749, 851, 998 |
| BstNI | CCWGG | 1 cut(s) | 1085 |
| BstNSI | RCATGY | 1 cut(s) | 1039 |
| BstSCI | CCNGG | 1 cut(s) | 1083 |
| BstSNI | TACGTA | 1 cut(s) | 897 |
| BstUI | CGCG | 1 cut(s) | 123 |
| BstV1I | GCAGC | 4 cut(s) | 542, 551, 640, 761 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1084 |
| BstZ17I | GTATAC | 1 cut(s) | 1033 |
| BsuRI | GGCC | 1 cut(s) | 1076 |
| BtsCI | GGATG | 3 cut(s) | 110, 457, 710 |
| BtsIMutI | CAGTG | 1 cut(s) | 1017 |
| BveI | ACCTGC | 2 cut(s) | 54, 959 |
| Cac8I | GCNNGC | 3 cut(s) | 438, 876, 1109 |
| Cfr13I | GGNCC | 1 cut(s) | 299 |
| CseI | GACGC | 1 cut(s) | 514 |
| Csp6I | GTAC | 2 cut(s) | 813, 898 |
| CviAII | CATG | 5 cut(s) | 183, 693, 769, 890, 1036 |
| CviQI | GTAC | 2 cut(s) | 813, 898 |
| DdeI | CTNAG | 4 cut(s) | 432, 549, 1040, 1176 |
| DpnI | GATC | 3 cut(s) | 201, 332, 1139 |
| DpnII | GATC | 3 cut(s) | 199, 330, 1137 |
| EaeI | YGGCCR | 1 cut(s) | 1074 |
| Eam1104I | CTCTTC | 6 cut(s) | 55, 67, 612, 708, 915, 936 |
| EarI | CTCTTC | 6 cut(s) | 55, 67, 612, 708, 915, 936 |
| Eco105I | TACGTA | 1 cut(s) | 897 |
| Eco130I | CCWWGG | 1 cut(s) | 993 |
| Eco47I | GGWCC | 1 cut(s) | 299 |
| Eco57I | CTGAAG | 1 cut(s) | 1041 |
| Eco88I | CYCGRG | 2 cut(s) | 476, 1150 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 678 |
| EcoRI | GAATTC | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 1083 |
| EcoT14I | CCWWGG | 1 cut(s) | 993 |
| ErhI | CCWWGG | 1 cut(s) | 993 |
| Esp3I | CGTCTC | 1 cut(s) | 300 |
| FaeI | CATG | 5 cut(s) | 186, 696, 772, 893, 1039 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 609, 641 |
| FatI | CATG | 5 cut(s) | 182, 692, 768, 889, 1035 |
| FauNDI | CATATG | 2 cut(s) | 745, 988 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| FblI | GTMKAC | 3 cut(s) | 313, 954, 1032 |
| Fnu4HI | GCNGC | 5 cut(s) | 121, 531, 540, 654, 775 |
| FokI | GGATG | 3 cut(s) | 97, 464, 717 |
| Fsp4HI | GCNGC | 5 cut(s) | 121, 531, 540, 654, 775 |
| FspBI | CTAG | 3 cut(s) | 54, 437, 875 |
| GluI | GCNGC | 5 cut(s) | 121, 531, 540, 654, 775 |
| HaeIII | GGCC | 1 cut(s) | 1076 |
| HapII | CCGG | 2 cut(s) | 804, 1005 |
| HgaI | GACGC | 1 cut(s) | 514 |
| Hin1I | GRCGYC | 1 cut(s) | 506 |
| Hin1II | CATG | 5 cut(s) | 186, 696, 772, 893, 1039 |
| HincII | GTYRAC | 1 cut(s) | 955 |
| HindII | GTYRAC | 1 cut(s) | 955 |
| HindIII | AAGCTT | 1 cut(s) | 7 |
| HinfI | GANTC | 9 cut(s) | 37, 151, 179, 361, 581, 622, 956, 1153, 1172 |
| HpaII | CCGG | 2 cut(s) | 804, 1005 |
| HphI | GGTGA | 2 cut(s) | 408, 1106 |
| Hpy166II | GTNNAC | 4 cut(s) | 314, 955, 1033, 1046 |
| Hpy188I | TCNGA | 3 cut(s) | 167, 504, 580 |
| Hpy188III | TCNNGA | 5 cut(s) | 41, 69, 253, 476, 710 |
| Hpy8I | GTNNAC | 4 cut(s) | 314, 955, 1033, 1046 |
| Hpy99I | CGWCG | 1 cut(s) | 826 |
| HpyAV | CCTTC | 1 cut(s) | 86 |
| HpyCH4III | ACNGT | 3 cut(s) | 311, 826, 952 |
| HpyCH4IV | ACGT | 3 cut(s) | 244, 896, 1011 |
| HpyCH4V | TGCA | 9 cut(s) | 63, 225, 239, 341, 446, 539, 569, 656, 968 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 536, 539, 545, 566, 749, 851, 998 |
| HpyF3I | CTNAG | 4 cut(s) | 432, 549, 1040, 1176 |
| HpySE526I | ACGT | 3 cut(s) | 244, 896, 1011 |
| Hsp92I | GRCGYC | 1 cut(s) | 506 |
| Hsp92II | CATG | 5 cut(s) | 186, 696, 772, 893, 1039 |
| KpnI | GGTACC | 1 cut(s) | 816 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 3 cut(s) | 199, 330, 1137 |
| LguI | GCTCTTC | 1 cut(s) | 67 |
| LmnI | GCTCC | 5 cut(s) | 138, 661, 719, 998, 1086 |
| Lsp1109I | GCAGC | 4 cut(s) | 542, 551, 640, 761 |
| LweI | GCATC | 3 cut(s) | 226, 433, 578 |
| MaeI | CTAG | 3 cut(s) | 54, 437, 875 |
| MaeII | ACGT | 3 cut(s) | 244, 896, 1011 |
| MaeIII | GTNAC | 3 cut(s) | 632, 643, 1007 |
| MalI | GATC | 3 cut(s) | 201, 332, 1139 |
| MboI | GATC | 3 cut(s) | 199, 330, 1137 |
| MfeI | CAATTG | 1 cut(s) | 604 |
| MlsI | TGGCCA | 1 cut(s) | 1076 |
| MluCI | AATT | 7 cut(s) | 44, 203, 511, 604, 723, 783, 807 |
| MluNI | TGGCCA | 1 cut(s) | 1076 |
| MlyI | GAGTC | 5 cut(s) | 590, 631, 950, 1162, 1166 |
| MnlI | CCTC | 8 cut(s) | 391, 441, 472, 674, 709, 937, 970, 1159 |
| Mox20I | TGGCCA | 1 cut(s) | 1076 |
| MroXI | GAANNNNTTC | 1 cut(s) | 465 |
| MscI | TGGCCA | 1 cut(s) | 1076 |
| MseI | TTAA | 2 cut(s) | 207, 282 |
| MslI | CAYNNNNRTG | 2 cut(s) | 421, 888 |
| Msp20I | TGGCCA | 1 cut(s) | 1076 |
| MspA1I | CMGCKG | 2 cut(s) | 533, 542 |
| MspI | CCGG | 2 cut(s) | 804, 1005 |
| MspR9I | CCNGG | 1 cut(s) | 1085 |
| MunI | CAATTG | 1 cut(s) | 604 |
| Mva1269I | GAATGC | 1 cut(s) | 904 |
| MvaI | CCWGG | 1 cut(s) | 1085 |
| MvnI | CGCG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 536, 539, 545, 566, 749, 851, 998 |
| NdeI | CATATG | 2 cut(s) | 745, 988 |
| NdeII | GATC | 3 cut(s) | 199, 330, 1137 |
| NheI | GCTAGC | 2 cut(s) | 436, 874 |
| NlaIII | CATG | 5 cut(s) | 186, 696, 772, 893, 1039 |
| NlaIV | GGNNCC | 2 cut(s) | 429, 814 |
| NspI | RCATGY | 1 cut(s) | 1039 |
| PaeR7I | CTCGAG | 2 cut(s) | 476, 1150 |
| PciSI | GCTCTTC | 1 cut(s) | 67 |
| PctI | GAATGC | 1 cut(s) | 904 |
| PdmI | GAANNNNTTC | 1 cut(s) | 465 |
| PfeI | GAWTC | 4 cut(s) | 37, 151, 179, 361 |
| Pfl23II | CGTACG | 1 cut(s) | 897 |
| PkrI | GCNGC | 5 cut(s) | 122, 532, 541, 655, 776 |
| PleI | GAGTC | 5 cut(s) | 589, 630, 950, 1161, 1166 |
| PpsI | GAGTC | 5 cut(s) | 589, 630, 950, 1161, 1166 |
| Ppu21I | YACGTR | 2 cut(s) | 245, 897 |
| Psp1406I | AACGTT | 1 cut(s) | 1011 |
| Psp6I | CCWGG | 1 cut(s) | 1083 |
| PspGI | CCWGG | 1 cut(s) | 1083 |
| PspLI | CGTACG | 1 cut(s) | 897 |
| PspN4I | GGNNCC | 2 cut(s) | 429, 814 |
| PspPI | GGNCC | 1 cut(s) | 299 |
| PspXI | VCTCGAGB | 1 cut(s) | 1150 |
| PvuII | CAGCTG | 2 cut(s) | 533, 542 |
| RsaI | GTAC | 2 cut(s) | 814, 899 |
| RsaNI | GTAC | 2 cut(s) | 813, 898 |
| RseI | CAYNNNNRTG | 2 cut(s) | 421, 888 |
| SalI | GTCGAC | 1 cut(s) | 953 |
| SapI | GCTCTTC | 1 cut(s) | 67 |
| SaqAI | TTAA | 2 cut(s) | 207, 282 |
| SatI | GCNGC | 5 cut(s) | 121, 531, 540, 654, 775 |
| Sau3AI | GATC | 3 cut(s) | 199, 330, 1137 |
| Sau96I | GGNCC | 1 cut(s) | 299 |
| SchI | GAGTC | 5 cut(s) | 590, 631, 950, 1162, 1166 |
| ScrFI | CCNGG | 1 cut(s) | 1085 |
| SfaNI | GCATC | 3 cut(s) | 226, 433, 578 |
| Sfr274I | CTCGAG | 2 cut(s) | 476, 1150 |
| SinI | GGWCC | 1 cut(s) | 299 |
| SlaI | CTCGAG | 2 cut(s) | 476, 1150 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 421, 888 |
| SmlI | CTYRAG | 2 cut(s) | 476, 1150 |
| SmoI | CTYRAG | 2 cut(s) | 476, 1150 |
| SnaBI | TACGTA | 1 cut(s) | 897 |
| Sse9I | AATT | 7 cut(s) | 44, 203, 511, 604, 723, 783, 807 |
| SsiI | CCGC | 2 cut(s) | 121, 464 |
| SspI | AATATT | 1 cut(s) | 919 |
| SspMI | CTAG | 3 cut(s) | 54, 437, 875 |
| StyD4I | CCNGG | 1 cut(s) | 1083 |
| StyI | CCWWGG | 1 cut(s) | 993 |
| TaaI | ACNGT | 3 cut(s) | 311, 826, 952 |
| TaiI | ACGT | 3 cut(s) | 247, 899, 1014 |
| TaqI | TCGA | 4 cut(s) | 477, 679, 954, 1151 |
| TasI | AATT | 7 cut(s) | 44, 203, 511, 604, 723, 783, 807 |
| TauI | GCSGC | 1 cut(s) | 123 |
| TfiI | GAWTC | 4 cut(s) | 37, 151, 179, 361 |
| Tru1I | TTAA | 2 cut(s) | 207, 282 |
| Tru9I | TTAA | 2 cut(s) | 207, 282 |
| TscAI | CASTG | 1 cut(s) | 1024 |
| TseI | GCWGC | 4 cut(s) | 530, 539, 653, 774 |
| TspDTI | ATGAA | 4 cut(s) | 243, 353, 872, 1090 |
| TspGWI | ACGGA | 1 cut(s) | 273 |
| TspRI | CASTG | 1 cut(s) | 1024 |
| VpaK11BI | GGWCC | 1 cut(s) | 299 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 678 |
| XapI | RAATTY | 2 cut(s) | 44, 783 |
| XceI | RCATGY | 1 cut(s) | 1039 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1069, 1084 |
| XhoI | CTCGAG | 2 cut(s) | 476, 1150 |
| XmiI | GTMKAC | 3 cut(s) | 313, 954, 1032 |
| XmnI | GAANNNNTTC | 1 cut(s) | 465 |
| XspI | CTAG | 3 cut(s) | 54, 437, 875 |