Rorug07G0179100

Hydroxymethylglutaryl-CoA lyase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
14882071 .. 14889282
7212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0179100.1

Sequence Viewer

Length: 2163 bp
ATGGCTTCGTCGGAGGAGGAACCACCGCAGCAGAGCCAAGAACCACCGCAGCAATCGCAGCAGCCACAGTCAGTGAAAGACTGTCTTCACAAGACCAAGCTCATTCAATTCTTGGGCCGCACCGCCCCTATCGTCCTCCAGAACGACAATGGTCCCTGCCCTCTCCTCGCCATCTGTAATGTTCTCTCCCTGAGAAACAACCTGAATTTGAGTGCAGACACTACAGAAGTCTCTCAAGAAAAGTTACTCTCACTCGTTGCTGAAAGATTAATTGATTCTAACAGTAATATTGATAATAAAGATGTTGGCTATGTAGAAAACCAACAGCAGAACATAGCTGATGCTATCGATCTACTCCCTCGACTTGCAACCGGAATCGATGTTAACATAAAATTCAGAAGGATAAGTGATTTTGAGTTTACTCCAGAATGTGCAATATTTGATCTGTTAGACATCCCACTATATCATGGCTGGATAGTTGATCCCCAGGACCATGATACTGCTAATGCAATTGGGTCGAAGTCCTATAACACTCTTACGGGGGAGCTTGTTGCACTGGAAACACAAAATATGGAGAGTGAGTCTAAGGGGAAGAATATTCCTCAAGAAGATTGTGTTGATTTTGTTGCTGCAACAACTGCAACACTTGGTGTACCTTCCCCAAGCCTTTCTAAAACTAGATCTTTTGATGAGTCTCCACATTCAGCTTCTGATGAACCAAAGGTAAGGAAAGGAGACTGTGAAGAAGAAGCAGAGTTGCTGATGGCTTTACAAATGTCTGAGGCTGAGCTCCCGACTGCAGTGGTTGATCCATTTGCAGCAAGTATTGACGCACCGCCTCTGTTAGTTAGTTCAGATGAAAGTACTCATCTTGAGAAGGTTATGCCTGTAGGTTCTGCAGATAAATCCGAAAAACATGATGCTGAATGCAGTAATTCTCATCGGTCAGAACTGTCTGTAGCAGATAACATTGCCCCCAGGAACGAGAGTAGTGATCTGATATCTTTTGAAACTGCTTCAGGGCAAACAGCATGTTCATCCCAGTTGGAGACGACTGAGGTGAACAATAATGGTCAGCGAACTTCTGTGAAATCAGAAGATCTTCCTAAGGATCTGGTTACAAAAAGCACAGGAAACGAATCAGACCAGATTAAAGGTGCAGTTTCTTTTAGTCCTGAGAGAAATAATGAATCCATAGATGAGAACCATACAGCTGTTTCAAAAGGGGGTGAAAAATTTGAGGATCAGGTCAAGCTTGCGACTAATGCCGATGGAATTGTAGAAATAAATAAGCAAATTGGGAGCAATATGACAGAGGTTCCTTGCTTATCTGCTTCAAATGTGGGTTCAGATTCATCTAGTGGCAGAATGCTGGAAATTGATGAATCGGAAACTTTGACGTCAAGTGGTGAAGGCAGTGAGCCCATCTATGAAGGAGAGGAACATATTTTGGACTCAGGCACAATTGTTTCTGAACAAAGAGAGCCTGTATATGAAGGTGAGGCAGTGCTTGCAAAGCAAGCAGACAAAGGGATGCTAGATGCAAGGTCAAAGGATGAAATCACTCCACAAGAAGGGGAATTGATCAGGAATTTTTTGAAGAACAATGCTAGTCAATTGACTTTCTACGGCCTTTTCTGCTTACAAGAGGGCCTTAAAGAGCGGGAGCTCTGTGTTTTCTTTCGAAACAACCACTTCAGTACCATGTTTAAGATCAATGGAGAGCTTTATCTTTTGGCTACTGATCAGGGTTACCTGAATCAGCATGATTTAGTGTGGGAAAAGCTTAATGAGGTGAATGGAGATACATTGTTCATGACTGGCAACTTCAAGGAATTTAAAGTTGAAAGCCAAACAAATGAAAATTGGGATGAAAATAATGCTGTTACCAGCACTGCGGACTACCTTGCGAGCATTGATAGTGCAGCTTCAGCAGGCTTCGATCTAAATTCTGATCTGCAATTGGCAATTGCTCTGCAACAACAGGAGTTTGAACAGCAACCACAACAACAACAGCAACGACAAAACGTGCAGCAACCATCTATTAGCGGTAATTCAAGGATGGTCACAGGTCCCCAGGGGCCAAGACATAATGTCAGAACTTCTACAACATCCTCTTCTCCAAGACCTGAAAAGCCCAAGGAAAAGTGTATCATTATGTGA

Protein Analysis

720

Amino Acids

78.99

Weight (kDa)

4.47

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MINDY_DUB PF04424 30 - 197 4.3e-54 MINDY deubiquitinase
MINDY_DUB PF04424 502 - 610 1.9e-37 MINDY deubiquitinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1403
AccBSI CCGCTC 1 cut(s) 1663
AciI CCGC 8 cut(s) 26, 47, 118, 123, 836, 1663, 1898, 2049
AclWI GGATC 4 cut(s) 476, 803, 1119, 1251
AcsI RAATTY 6 cut(s) 205, 392, 1235, 1591, 1835, 1948
AcuI CTGAAG 3 cut(s) 1002, 1681, 1914
AcyI GRCGYC 1 cut(s) 1400
AdeI CACNNNGTG 1 cut(s) 650
AfaI GTAC 3 cut(s) 654, 865, 1702
AfiI CCNNNNNNNGG 1 cut(s) 1574
AgsI TTSAA 9 cut(s) 107, 1010, 1221, 1338, 1600, 1831, 1847, 1994, 2058
AhdI GACNNNNNGTC 1 cut(s) 2093
AjnI CCWGG 3 cut(s) 486, 977, 2076
Alw21I GWGCWC 2 cut(s) 792, 1671
Alw26I GTCTC 4 cut(s) 235, 699, 729, 1043
AlwI GGATC 4 cut(s) 476, 803, 1119, 1251
AlwNI CAGNNNCTG 1 cut(s) 710
AoxI GGCC 4 cut(s) 115, 1630, 1651, 2081
ApeKI GCWGC 8 cut(s) 28, 49, 58, 61, 629, 818, 1925, 2032
ApoI RAATTY 6 cut(s) 205, 392, 1235, 1591, 1835, 1948
AseI ATTAAT 1 cut(s) 269
Asp700I GAANNNNTTC 1 cut(s) 1101
AspS9I GGNCC 6 cut(s) 115, 152, 490, 1651, 2072, 2081
AsuHPI GGTGA 5 cut(s) 1072, 1241, 1421, 1511, 1807
AsuII TTCGAA 1 cut(s) 1684
AvaII GGWCC 3 cut(s) 152, 490, 2072
AxyI CCTNAGG 1 cut(s) 1107
BaeI ACNNNNGTAYC 2 cut(s) 1684, 1717
BanII GRGCYC 3 cut(s) 792, 1425, 1671
BbsI GAAGAC 1 cut(s) 77
Bbv12I GWGCWC 2 cut(s) 792, 1671
BbvI GCAGC 8 cut(s) 40, 61, 70, 73, 616, 830, 1937, 2044
BccI CCATC 6 cut(s) 179, 757, 1265, 1433, 2047, 2056
BceAI ACGGC 1 cut(s) 1645
BcgI CGANNNNNNTGC 2 cut(s) 498, 532
BciT130I CCWGG 3 cut(s) 488, 979, 2078
BclI TGATCA 2 cut(s) 1584, 1744
BcoDI GTCTC 4 cut(s) 235, 699, 729, 1043
BfaI CTAG 4 cut(s) 678, 1359, 1538, 1611
BfmI CTRYAG 5 cut(s) 222, 798, 888, 897, 957
BglII AGATCT 2 cut(s) 680, 1099
BisI GCNGC 9 cut(s) 29, 50, 59, 62, 118, 630, 819, 1926, 2033
BlpI GCTNAGC 1 cut(s) 786
BlsI GCNGC 9 cut(s) 30, 51, 60, 63, 119, 631, 820, 1927, 2034
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 3 cut(s) 488, 979, 2078
Bme18I GGWCC 3 cut(s) 152, 490, 2072
BmeRI GACNNNNNGTC 1 cut(s) 2093
BmgT120I GGNCC 6 cut(s) 115, 152, 490, 1651, 2072, 2081
BmiI GGNNCC 5 cut(s) 21, 154, 1320, 2074, 2082
BmrFI CCNGG 3 cut(s) 488, 979, 2078
BmrI ACTGGG 1 cut(s) 1036
BmsI GCATC 4 cut(s) 331, 910, 1524, 1531
BmuI ACTGGG 1 cut(s) 1036
BoxI GACNNNNGTC 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 77
BpmI CTGGAG 2 cut(s) 122, 408
Bpu1102I GCTNAGC 1 cut(s) 786
Bpu14I TTCGAA 1 cut(s) 1684
BpuEI CTTGAG 3 cut(s) 219, 588, 893
Bsa29I ATCGAT 2 cut(s) 348, 378
BsaHI GRCGYC 1 cut(s) 1400
BsaJI CCNNGG 5 cut(s) 486, 977, 2076, 2077, 2139
BsaWI WCCGGW 1 cut(s) 371
BsaXI ACNNNNNCTCC 2 cut(s) 566, 596
Bsc4I CCNNNNNNNGG 1 cut(s) 1574
Bse1I ACTGG 3 cut(s) 561, 1042, 1825
Bse21I CCTNAGG 1 cut(s) 1107
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 3 cut(s) 488, 979, 2078
BseCI ATCGAT 2 cut(s) 348, 378
BseDI CCNNGG 5 cut(s) 486, 977, 2076, 2077, 2139
BseGI GGATG 7 cut(s) 453, 1037, 1539, 1561, 1876, 2067, 2111
BseLI CCNNNNNNNGG 1 cut(s) 1574
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 6 cut(s) 182, 771, 777, 1047, 1167, 1470
BseNI ACTGG 3 cut(s) 561, 1042, 1825
BseRI GAGGAG 2 cut(s) 29, 155
BseXI GCAGC 8 cut(s) 40, 61, 70, 73, 616, 830, 1937, 2044
BsgI GTGCAG 4 cut(s) 234, 1179, 1944, 2051
BshFI GGCC 4 cut(s) 117, 1632, 1653, 2083
BshVI ATCGAT 2 cut(s) 348, 378
BsiHKAI GWGCWC 2 cut(s) 792, 1671
BsiSI CCGG 1 cut(s) 372
BslFI GGGAC 2 cut(s) 138, 2058
BslI CCNNNNNNNGG 1 cut(s) 1574
BsmAI GTCTC 4 cut(s) 235, 699, 729, 1043
BsmBI CGTCTC 1 cut(s) 1043
BsmFI GGGAC 2 cut(s) 138, 2058
BsmI GAATGC 2 cut(s) 932, 1374
BsnI GGCC 4 cut(s) 117, 1632, 1653, 2083
Bsp119I TTCGAA 1 cut(s) 1684
Bsp1286I GDGCHC 3 cut(s) 792, 1425, 1671
Bsp1720I GCTNAGC 1 cut(s) 786
BspACI CCGC 8 cut(s) 26, 47, 118, 123, 836, 1663, 1898, 2049
BspANI GGCC 4 cut(s) 117, 1632, 1653, 2083
BspCNI CTCAG 6 cut(s) 183, 772, 778, 1048, 1168, 1469
BspDI ATCGAT 2 cut(s) 348, 378
BspHI TCATGA 1 cut(s) 1815
BspLI GGNNCC 5 cut(s) 21, 154, 1320, 2074, 2082
BspMAI CTGCAG 2 cut(s) 802, 901
BspPI GGATC 4 cut(s) 476, 803, 1119, 1251
BspT104I TTCGAA 1 cut(s) 1684
BsrBI CCGCTC 1 cut(s) 1663
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 3 cut(s) 561, 1042, 1825
BssECI CCNNGG 5 cut(s) 486, 977, 2076, 2077, 2139
BssNI GRCGYC 1 cut(s) 1400
BssT1I CCWWGG 1 cut(s) 2139
Bst2UI CCWGG 3 cut(s) 488, 979, 2078
Bst4CI ACNGT 5 cut(s) 69, 83, 284, 740, 954
Bst6I CTCTTC 1 cut(s) 2122
BstACI GRCGYC 1 cut(s) 1400
BstAPI GCANNNNNTGC 2 cut(s) 638, 1511
BstBI TTCGAA 1 cut(s) 1684
BstC8I GCNNGC 5 cut(s) 1257, 1512, 1521, 1912, 1936
BstDEI CTNAG 8 cut(s) 191, 585, 780, 786, 1056, 1107, 1176, 1456
BstEII GGTNACC 1 cut(s) 1751
BstF5I GGATG 7 cut(s) 453, 1037, 1539, 1561, 1876, 2067, 2111
BstMAI GTCTC 4 cut(s) 235, 699, 729, 1043
BstMWI GCNNNNNNNGC 9 cut(s) 55, 58, 638, 1265, 1511, 1516, 1520, 1638, 1931
BstNI CCWGG 3 cut(s) 488, 979, 2078
BstNSI RCATGY 1 cut(s) 1035
BstPAI GACNNNNGTC 1 cut(s) 150
BstPI GGTNACC 1 cut(s) 1751
BstSCI CCNGG 3 cut(s) 486, 977, 2076
BstSFI CTRYAG 5 cut(s) 222, 798, 888, 897, 957
BstV1I GCAGC 8 cut(s) 40, 61, 70, 73, 616, 830, 1937, 2044
BstV2I GAAGAC 1 cut(s) 77
BstX2I RGATCY 3 cut(s) 680, 1099, 1111
BstYI RGATCY 3 cut(s) 680, 1099, 1111
Bsu15I ATCGAT 2 cut(s) 348, 378
Bsu36I CCTNAGG 1 cut(s) 1107
BsuRI GGCC 4 cut(s) 117, 1632, 1653, 2083
BsuTUI ATCGAT 2 cut(s) 348, 378
BtsCI GGATG 7 cut(s) 453, 1037, 1539, 1561, 1876, 2067, 2111
BtsI GCAGTG 4 cut(s) 807, 1423, 1512, 1893
BtsIMutI CAGTG 6 cut(s) 78, 554, 807, 1423, 1512, 1893
Cac8I GCNNGC 5 cut(s) 1257, 1512, 1521, 1912, 1936
CaiI CAGNNNCTG 1 cut(s) 710
CciI TCATGA 1 cut(s) 1815
Cfr13I GGNCC 6 cut(s) 115, 152, 490, 1651, 2072, 2081
ClaI ATCGAT 2 cut(s) 348, 378
CseI GACGC 1 cut(s) 839
Csp6I GTAC 3 cut(s) 653, 864, 1701
CviAII CATG 7 cut(s) 467, 494, 917, 1032, 1705, 1766, 1816
CviQI GTAC 3 cut(s) 653, 864, 1701
DdeI CTNAG 8 cut(s) 191, 585, 780, 786, 1056, 1107, 1176, 1456
DraI TTTAAA 1 cut(s) 1840
DraIII CACNNNGTG 1 cut(s) 650
DriI GACNNNNNGTC 1 cut(s) 2093
Eam1104I CTCTTC 1 cut(s) 2122
Eam1105I GACNNNNNGTC 1 cut(s) 2093
EarI CTCTTC 1 cut(s) 2122
Ecl136II GAGCTC 2 cut(s) 790, 1669
Eco130I CCWWGG 1 cut(s) 2139
Eco24I GRGCYC 3 cut(s) 792, 1425, 1671
Eco32I GATATC 1 cut(s) 1002
Eco47I GGWCC 3 cut(s) 152, 490, 2072
Eco53kI GAGCTC 2 cut(s) 790, 1669
Eco57I CTGAAG 3 cut(s) 1002, 1681, 1914
Eco81I CCTNAGG 1 cut(s) 1107
Eco91I GGTNACC 1 cut(s) 1751
EcoICRI GAGCTC 2 cut(s) 790, 1669
EcoO109I RGGNCCY 2 cut(s) 1651, 2072
EcoO65I GGTNACC 1 cut(s) 1751
EcoRII CCWGG 3 cut(s) 486, 977, 2076
EcoRV GATATC 1 cut(s) 1002
EcoT14I CCWWGG 1 cut(s) 2139
EcoT38I GRGCYC 3 cut(s) 792, 1425, 1671
ErhI CCWWGG 1 cut(s) 2139
Esp3I CGTCTC 1 cut(s) 1043
FaeI CATG 7 cut(s) 470, 497, 920, 1035, 1708, 1769, 1819
FalI AAGNNNNNCTT 4 cut(s) 69, 101, 1638, 1670
FaqI GGGAC 2 cut(s) 138, 2058
FatI CATG 7 cut(s) 466, 493, 916, 1031, 1704, 1765, 1815
FauI CCCGC 1 cut(s) 1656
FbaI TGATCA 2 cut(s) 1584, 1744
Fnu4HI GCNGC 9 cut(s) 29, 50, 59, 62, 118, 630, 819, 1926, 2033
FokI GGATG 7 cut(s) 440, 1024, 1546, 1568, 1883, 2074, 2098
FriOI GRGCYC 3 cut(s) 792, 1425, 1671
Fsp4HI GCNGC 9 cut(s) 29, 50, 59, 62, 118, 630, 819, 1926, 2033
FspBI CTAG 4 cut(s) 678, 1359, 1538, 1611
GluI GCNGC 9 cut(s) 29, 50, 59, 62, 118, 630, 819, 1926, 2033
GsuI CTGGAG 2 cut(s) 122, 408
HaeIII GGCC 4 cut(s) 117, 1632, 1653, 2083
HapII CCGG 1 cut(s) 372
HgaI GACGC 1 cut(s) 839
Hin1I GRCGYC 1 cut(s) 1400
Hin1II CATG 7 cut(s) 470, 497, 920, 1035, 1708, 1769, 1819
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HindIII AAGCTT 2 cut(s) 1253, 1784
HpaI GTTAAC 1 cut(s) 385
HpaII CCGG 1 cut(s) 372
HphI GGTGA 5 cut(s) 1072, 1241, 1421, 1511, 1807
Hpy166II GTNNAC 4 cut(s) 385, 420, 653, 1063
Hpy188III TCNNGA 9 cut(s) 139, 236, 425, 605, 793, 872, 1175, 1588, 1816
Hpy8I GTNNAC 4 cut(s) 385, 420, 653, 1063
Hpy99I CGWCG 1 cut(s) 13
HpyAV CCTTC 7 cut(s) 393, 666, 871, 1406, 1427, 1490, 1568
HpyCH4III ACNGT 5 cut(s) 69, 83, 284, 740, 954
HpyCH4IV ACGT 2 cut(s) 1400, 2028
HpyF10VI GCNNNNNNNGC 9 cut(s) 55, 58, 638, 1265, 1511, 1516, 1520, 1638, 1931
HpyF3I CTNAG 8 cut(s) 191, 585, 780, 786, 1056, 1107, 1176, 1456
HpySE526I ACGT 2 cut(s) 1400, 2028
Hsp92I GRCGYC 1 cut(s) 1400
Hsp92II CATG 7 cut(s) 470, 497, 920, 1035, 1708, 1769, 1819
Ksp22I TGATCA 2 cut(s) 1584, 1744
KspAI GTTAAC 1 cut(s) 385
LmnI GCTCC 4 cut(s) 544, 795, 1302, 1666
Lsp1109I GCAGC 8 cut(s) 40, 61, 70, 73, 616, 830, 1937, 2044
LweI GCATC 4 cut(s) 331, 910, 1524, 1531
MaeI CTAG 4 cut(s) 678, 1359, 1538, 1611
MaeII ACGT 2 cut(s) 1400, 2028
MaeIII GTNAC 5 cut(s) 243, 1117, 1751, 1885, 2065
MbiI CCGCTC 1 cut(s) 1663
MboII GAAGA 9 cut(s) 77, 604, 620, 755, 758, 1094, 1109, 1612, 2109
MfeI CAATTG 5 cut(s) 510, 1464, 1616, 1961, 1968
MflI RGATCY 3 cut(s) 680, 1099, 1111
MhlI GDGCHC 3 cut(s) 792, 1425, 1671
MlyI GAGTC 3 cut(s) 590, 701, 1448
MmeI TCCRAC 1 cut(s) 1026
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 7 cut(s) 269, 384, 1152, 1656, 1710, 1788, 1839
MspA1I CMGCKG 1 cut(s) 1214
MspI CCGG 1 cut(s) 372
MspR9I CCNGG 3 cut(s) 488, 979, 2078
MunI CAATTG 5 cut(s) 510, 1464, 1616, 1961, 1968
Mva1269I GAATGC 2 cut(s) 932, 1374
MvaI CCWGG 3 cut(s) 488, 979, 2078
MwoI GCNNNNNNNGC 9 cut(s) 55, 58, 638, 1265, 1511, 1516, 1520, 1638, 1931
NlaIII CATG 7 cut(s) 470, 497, 920, 1035, 1708, 1769, 1819
NlaIV GGNNCC 5 cut(s) 21, 154, 1320, 2074, 2082
NmuCI GTSAC 1 cut(s) 2065
NspI RCATGY 1 cut(s) 1035
NspV TTCGAA 1 cut(s) 1684
PagI TCATGA 1 cut(s) 1815
PasI CCCWGGG 1 cut(s) 2077
PctI GAATGC 2 cut(s) 932, 1374
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 7 cut(s) 275, 375, 1139, 1190, 1352, 1385, 1759
PkrI GCNGC 9 cut(s) 30, 51, 60, 63, 119, 631, 820, 1927, 2034
PleI GAGTC 3 cut(s) 589, 700, 1448
PpsI GAGTC 3 cut(s) 589, 700, 1448
PpuMI RGGWCCY 1 cut(s) 2072
PshAI GACNNNNGTC 1 cut(s) 150
PshBI ATTAAT 1 cut(s) 269
Psp124BI GAGCTC 2 cut(s) 792, 1671
Psp5II RGGWCCY 1 cut(s) 2072
Psp6I CCWGG 3 cut(s) 486, 977, 2076
PspEI GGTNACC 1 cut(s) 1751
PspGI CCWGG 3 cut(s) 486, 977, 2076
PspN4I GGNNCC 5 cut(s) 21, 154, 1320, 2074, 2082
PspPI GGNCC 6 cut(s) 115, 152, 490, 1651, 2072, 2081
PspPPI RGGWCCY 1 cut(s) 2072
PstI CTGCAG 2 cut(s) 802, 901
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 3 cut(s) 680, 1099, 1111
PvuII CAGCTG 1 cut(s) 1214
RsaI GTAC 3 cut(s) 654, 865, 1702
RsaNI GTAC 3 cut(s) 653, 864, 1701
SacI GAGCTC 2 cut(s) 792, 1671
SaqAI TTAA 7 cut(s) 269, 384, 1152, 1656, 1710, 1788, 1839
SatI GCNGC 9 cut(s) 29, 50, 59, 62, 118, 630, 819, 1926, 2033
Sau96I GGNCC 6 cut(s) 115, 152, 490, 1651, 2072, 2081
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 3 cut(s) 590, 701, 1448
ScrFI CCNGG 3 cut(s) 488, 979, 2078
SduI GDGCHC 3 cut(s) 792, 1425, 1671
SfaNI GCATC 4 cut(s) 331, 910, 1524, 1531
SfcI CTRYAG 5 cut(s) 222, 798, 888, 897, 957
SfuI TTCGAA 1 cut(s) 1684
SinI GGWCC 3 cut(s) 152, 490, 2072
SmlI CTYRAG 3 cut(s) 234, 603, 872
SmoI CTYRAG 3 cut(s) 234, 603, 872
SsiI CCGC 8 cut(s) 26, 47, 118, 123, 836, 1663, 1898, 2049
SspI AATATT 3 cut(s) 289, 438, 598
SspMI CTAG 4 cut(s) 678, 1359, 1538, 1611
SstI GAGCTC 2 cut(s) 792, 1671
StyD4I CCNGG 3 cut(s) 486, 977, 2076
StyI CCWWGG 1 cut(s) 2139
TaaI ACNGT 5 cut(s) 69, 83, 284, 740, 954
TaiI ACGT 2 cut(s) 1403, 2031
TaqI TCGA 6 cut(s) 348, 361, 378, 518, 1684, 1941
TaqII GACCGA 1 cut(s) 933
TatI WGTACW 1 cut(s) 863
TauI GCSGC 1 cut(s) 120
TfiI GAWTC 7 cut(s) 275, 375, 1139, 1190, 1352, 1385, 1759
Tru1I TTAA 7 cut(s) 269, 384, 1152, 1656, 1710, 1788, 1839
Tru9I TTAA 7 cut(s) 269, 384, 1152, 1656, 1710, 1788, 1839
TscAI CASTG 6 cut(s) 78, 561, 807, 1423, 1512, 1900
TseFI GTSAC 1 cut(s) 2065
TseI GCWGC 8 cut(s) 28, 49, 58, 61, 629, 818, 1925, 2032
Tsp45I GTSAC 1 cut(s) 2065
TspRI CASTG 6 cut(s) 78, 561, 807, 1423, 1512, 1900
VpaK11BI GGWCC 3 cut(s) 152, 490, 2072
VspI ATTAAT 1 cut(s) 269
XapI RAATTY 6 cut(s) 205, 392, 1235, 1591, 1835, 1948
XceI RCATGY 1 cut(s) 1035
XcmI CCANNNNNNNNNTGG 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 4 cut(s) 678, 1359, 1538, 1611
ZraI GACGTC 1 cut(s) 1401
ZrmI AGTACT 1 cut(s) 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.