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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03341 |
| fragaria_vesca | FvH4_5g32381 |
| malus_domestica | MD09G1261500.v1.1 |
| prunus_persica | Prupe.3G158900_v2.0.a1 Prupe.6G002100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0370661 |
| rosa_laevigata | RLG00000015816 RLG00000018873 |
| rosa_multiflora | Rmu_sc0000555.1_g000021 Rmu_sc0001669.1_g000050 Rmu_sc0001863.1_g000019 Rmu_sc0002343.1_g000054 Rmu_sc0004424.1_g000010 Rmu_sc0004550.1_g000007 Rmu_sc0005832.1_g000002 Rmu_sc0007137.1_g000013 Rmu_sc0010065.1_g000013 Rmu_sc0010969.1_g000011 Rmu_sc0039881.1_g000001 Rmu_ssc0000372.1_g000044 |
| rosa_roxburghii | Rroxscaffold_152G00434700 Rroxscaffold_1G00026520 Rroxscaffold_3G00239240 Rroxscaffold_3G00249000 Rroxscaffold_4G00286340 Rroxscaffold_4G00318500 Rroxscaffold_6G00390230 Rroxscaffold_6G00391860 Rroxscaffold_6G00391900 Rroxscaffold_6G00423860 Rroxscaffold_7G00193330 |
| rosa_rugosa | Rorug03G0261800 |
| rosa_samantha | Rh1AG367900 Rh1BG331400 Rh3AG255200 Rh3CG290000 Rh7BG354000 |
| rosa_wichuraiana | Rw1G032370 Rw3G027320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 222 |
| AciI | CCGC | 2 cut(s) | 189, 220 |
| AclWI | GGATC | 2 cut(s) | 5, 18 |
| AcoI | YGGCCR | 1 cut(s) | 80 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 89, 164 |
| AluBI | AGCT | 2 cut(s) | 136, 216 |
| AluI | AGCT | 2 cut(s) | 136, 216 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| AlwI | GGATC | 2 cut(s) | 5, 18 |
| AoxI | GGCC | 2 cut(s) | 80, 281 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| BamHI | GGATCC | 1 cut(s) | 10 |
| BanI | GGYRCC | 1 cut(s) | 222 |
| BccI | CCATC | 1 cut(s) | 237 |
| BceAI | ACGGC | 1 cut(s) | 157 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BmiI | GGNNCC | 2 cut(s) | 12, 224 |
| Bsa29I | ATCGAT | 1 cut(s) | 151 |
| BsaWI | WCCGGW | 1 cut(s) | 160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 89, 164 |
| Bse3DI | GCAATG | 1 cut(s) | 14 |
| BseCI | ATCGAT | 1 cut(s) | 151 |
| BseGI | GGATG | 1 cut(s) | 248 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 89, 164 |
| BseMI | GCAATG | 1 cut(s) | 14 |
| BseRI | GAGGAG | 6 cut(s) | 147, 218, 221, 266, 304, 325 |
| BshFI | GGCC | 2 cut(s) | 82, 283 |
| BshNI | GGYRCC | 1 cut(s) | 222 |
| BshVI | ATCGAT | 1 cut(s) | 151 |
| BsiSI | CCGG | 3 cut(s) | 83, 100, 161 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 89, 164 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsnI | GGCC | 2 cut(s) | 82, 283 |
| Bsp143I | GATC | 2 cut(s) | 10, 152 |
| BspACI | CCGC | 2 cut(s) | 189, 220 |
| BspANI | GGCC | 2 cut(s) | 82, 283 |
| BspDI | ATCGAT | 1 cut(s) | 151 |
| BspLI | GGNNCC | 2 cut(s) | 12, 224 |
| BspPI | GGATC | 2 cut(s) | 5, 18 |
| BspT107I | GGYRCC | 1 cut(s) | 222 |
| BsrDI | GCAATG | 1 cut(s) | 14 |
| BssMI | GATC | 2 cut(s) | 10, 152 |
| Bst4CI | ACNGT | 1 cut(s) | 131 |
| Bst6I | CTCTTC | 1 cut(s) | 281 |
| BstC8I | GCNNGC | 2 cut(s) | 214, 218 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 162 |
| BstF5I | GGATG | 1 cut(s) | 248 |
| BstKTI | GATC | 2 cut(s) | 13, 155 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMBI | GATC | 2 cut(s) | 10, 152 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 222 |
| BstX2I | RGATCY | 1 cut(s) | 10 |
| BstYI | RGATCY | 1 cut(s) | 10 |
| Bsu15I | ATCGAT | 1 cut(s) | 151 |
| BsuRI | GGCC | 2 cut(s) | 82, 283 |
| BsuTUI | ATCGAT | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 248 |
| BtsI | GCAGTG | 1 cut(s) | 184 |
| BtsIMutI | CAGTG | 1 cut(s) | 184 |
| Cac8I | GCNNGC | 2 cut(s) | 214, 218 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| ClaI | ATCGAT | 1 cut(s) | 151 |
| CviJI | RGCY | 5 cut(s) | 82, 136, 144, 216, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 82, 136, 144, 216, 283 |
| DpnI | GATC | 2 cut(s) | 12, 154 |
| DpnII | GATC | 2 cut(s) | 10, 152 |
| EaeI | YGGCCR | 1 cut(s) | 80 |
| Eam1104I | CTCTTC | 1 cut(s) | 281 |
| EarI | CTCTTC | 1 cut(s) | 281 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 162 |
| FauI | CCCGC | 1 cut(s) | 182 |
| FokI | GGATG | 1 cut(s) | 255 |
| HaeIII | GGCC | 2 cut(s) | 82, 283 |
| HapII | CCGG | 3 cut(s) | 83, 100, 161 |
| HinfI | GANTC | 4 cut(s) | 62, 94, 168, 230 |
| HpaII | CCGG | 3 cut(s) | 83, 100, 161 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy99I | CGWCG | 1 cut(s) | 112 |
| HpyCH4III | ACNGT | 1 cut(s) | 131 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 222 |
| Kzo9I | GATC | 2 cut(s) | 10, 152 |
| LpnPI | CCDG | 4 cut(s) | 75, 96, 113, 174 |
| MaeIII | GTNAC | 1 cut(s) | 194 |
| MalI | GATC | 2 cut(s) | 12, 154 |
| MboI | GATC | 2 cut(s) | 10, 152 |
| MboII | GAAGA | 2 cut(s) | 269, 298 |
| MflI | RGATCY | 1 cut(s) | 10 |
| MluCI | AATT | 2 cut(s) | 121, 261 |
| MlyI | GAGTC | 1 cut(s) | 177 |
| MspI | CCGG | 3 cut(s) | 83, 100, 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 222 |
| NdeII | GATC | 2 cut(s) | 10, 152 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 224 |
| NmeAIII | GCCGAG | 1 cut(s) | 251 |
| NmuCI | GTSAC | 1 cut(s) | 194 |
| PfeI | GAWTC | 3 cut(s) | 62, 94, 230 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 224 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| PsuI | RGATCY | 1 cut(s) | 10 |
| Sau3AI | GATC | 2 cut(s) | 10, 152 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| SchI | GAGTC | 1 cut(s) | 177 |
| SetI | ASST | 3 cut(s) | 9, 138, 218 |
| Sse9I | AATT | 2 cut(s) | 121, 261 |
| SsiI | CCGC | 2 cut(s) | 189, 220 |
| TaaI | ACNGT | 1 cut(s) | 131 |
| TaqI | TCGA | 4 cut(s) | 21, 107, 151, 174 |
| TasI | AATT | 2 cut(s) | 121, 261 |
| TfiI | GAWTC | 3 cut(s) | 62, 94, 230 |
| TscAI | CASTG | 1 cut(s) | 191 |
| TseFI | GTSAC | 1 cut(s) | 194 |
| Tsp45I | GTSAC | 1 cut(s) | 194 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 53, 223 |
| TspRI | CASTG | 1 cut(s) | 191 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 162 |