Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001786

Physical Location & Seq

Genomic Coordinates Forward (+)

47490324 .. 47493319

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0358800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCGAAAACACTGAAAGAATTCCTCAACGAAGAAAAGGAAGCAGAGGAGGCGGCCGCTCGGCCGCCGGCGACGAGTGCGAAGTCCTCGGAGGCAGGCGCCATGCCGGAGATAGACTCGTCGAGATCGGATCCGTCGATGAAGCTTTCGGATTTCACTGCTGATGACTCGGTGTGTTTCGAGCTTGAGCGGCTCAAGGAGATTTCTGAAGCATCCGAGAAGAACATGAAGCTAAAGCAGGAAGAGAAAGGTGCGACTCTTACTGTGGACTCAACGAAATCGGAAGAAGTTTCTGGAACCTCTAAGAAGAGCGAGCGTGCCGAATTGGCCAAGAAACATCCGATTTTGCCGGAGATGTCTACCGGAATGTGCGTGACGCCGCCGTCTGCAGGGGAGGCAAAGAAGTCGGTGAACCAGACGACGTCGCTTCTGATGTCGCATCAAGGCATGAGGGAATCTGCGTTCCATGCACTCAACGTGAAATCTTCGAAGGAATCTTCGGCCGCTATGGAGGCCTGGGAGAGACTCAAGAAATCGGACGTGTACGTTTACTACGGAGGCAAGCCGGTGGGGACTCTTGCTGCTATGGATCCAACGGCCGAGGCTGTTGATCACAATCAGGTATTTGTGAGAGATTTTGTTCCTACTGGTTTGGCCTGCCTCATGAACGTTCCCGCAGAGCCAGAGATAGTCCTGACCTTTCTCCTAGAGACCCTCCTCCACCTCCAAGGTCCGGAGAAAATGGCTGATATCTTTACACTTGGAGAAGGTATTCTTCCTGCGAGCTTTAAGGTTTCAAATGATTCAGATCGTGCCAAGGAAACTATCGTTGCAGATTTTGGTCGTACCGCAATTGGAAGAGTTGCTCCGGTTGATTCTGGATTCTGGTGGATCACATATGACACATGTACTACTCGTGACACATTTCCAACACTTCTTTGTGCAGATGGCTGCAGTATGATTGACAGGCAAATGGGCATAAATGGTGATACAACTGAGATCCCAGCAGTTTTCTACTTTGAATTGAGGGGTGCAATGCAGCTATCGAAGCCAGAGTGTGAAGGGATGGAAGTTCTTGAGAGGATAGCACTGTTTTGGCCCCTGACTTCCAAGACTGGGAGGTCTCTTATTGCACAGAGGGCAATAGAGCTGGCTGCTCAAGCTACTGGTGGTACCTTGCCGGCTGCATCTACTCCAGCGCCGCAAGAGGGTGGAGCTAATGGTCCCTCAGCAGCCAAACGCAAGAGGGAGGCCTCTGATGAAGCATCTCGCATTAACCGCAGGCGCATTGAGGAGGAGGATTTAAAACTCGTATGGGAGGCAATCCTGGGGAATTTACATGGTGATATTGGCATGGAGGTTATTTACTGGGTCGACATATTTGATGTTGCAGAATTACTCGGGAGAGTTGAGGGAGTGGAGGTGATGGAGAATTTCCTGCAGCTTGAGACTTCTGTAGCAGCCGTTCTAGTTCAGAACCAACGCTCTATCACTACTCCGAAAGTGTATTTTTCCTTGTGCACCTCGCAGAGGTTGGTCGAACTATCCATAGCCACAACTCCTTGGCCTCGCTTCAGGGTTGAAGTCAGAGGAGTTCATGTGTACGAGCAGCCAGGGGATGAAATAGAAGTAGCAGAGAATGAAGTCGAAGAAGGAGAGGAAGAAGAGGAAGCAGCAGAGGGAGTTCATGGGCACGAGCAGGCAGGGGAAGAAGCGGAAGCAGCGGAGGGAGTTCACGGGCACGAGCAGGCAGGGGAAGAAGCGGAAGCAGCAGAGGGAGTTCATGGGCACGAGCAGGCTGGGAACGAAGTGAAAGAAGAAGCAGGGGAAAATGTGGAAGAAGAAGTGGAAGCAGCAGAGGGAGTTCATGGGCACAAGCAGGCAGGGAATGAAGTGAAAGAAGAAGCAGCGGAAAAAGTGGAAGAAGAAGCAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

645

Amino Acids

70.24

Weight (kDa)

4.63

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	172 - 299	3.2e-37	Alkaline and neutral invertase
Glyco_hydro_100	PF12899	307 - 362	9.4e-11	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58430 AT2G24560 AT2G24560 AT2G30220 AT2G30310 AT2G31540 AT2G31550
fragaria_vesca	FvH4_3g39810 FvH4_7g24860 FvH4_7g24860 FvH4_7g24860 FvH4_7g24860 FvH4_7g24860
malus_domestica	MD03G1056900.v1.1 MD11G1058600.v1.1
prunus_persica	Prupe.6G047900_v2.0.a1
pyrus_communis	pycom12g09990
rosa_chinensis	RchiOBHm_Chr1g0347201 RchiOBHm_Chr1g0370741 RchiOBHm_Chr5g0071691
rosa_laevigata	RLG00000027014 RLG00000036240
rosa_multiflora	Rmu_co7970762.1_g000001 Rmu_sc0004550.1_g000015 Rmu_sc0009615.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009480 Rroxscaffold_4G00286280
rosa_rugosa	Rorug01G0358800 Rorug01G0358900.1 Rorug01G0359000 Rorug01G0359100 Rorug01G0359200 Rorug05G0414200
rosa_samantha	Rh1AG203000 Rh1BG066100 Rh1BG332000 Rh1CG188200 Rh1CG345900 Rh1DG363400 Rh5AG470300 Rh5BG099600 Rh5BG489800 Rh5CG397700 Rh5CG513600 Rh5DG500600
rosa_wichuraiana	Rw1G032430 Rw5G043700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	382, 1120
AatII	GACGTC	1 cut(s)	425
Acc65I	GGTACC	1 cut(s)	1172
AccB1I	GGYRCC	2 cut(s)	98, 1172
AccBSI	CCGCTC	2 cut(s)	59, 190
AccI	GTMKAC	2 cut(s)	359, 1374
AccIII	TCCGGA	1 cut(s)	733
AclI	AACGTT	1 cut(s)	669
AclWI	GGATC	6 cut(s)	125, 138, 584, 597, 899, 994
AcoI	YGGCCR	5 cut(s)	54, 62, 327, 501, 597
AcsI	RAATTY	3 cut(s)	20, 1333, 1432
AcuI	CTGAAG	2 cut(s)	228, 1558
AcyI	GRCGYC	3 cut(s)	99, 377, 422
AfaI	GTAC	5 cut(s)	545, 847, 910, 1174, 1604
AfiI	CCNNNNNNNGG	5 cut(s)	389, 733, 1116, 1208, 1530
AflIII	ACRYGT	2 cut(s)	540, 905
AgsI	TTSAA	3 cut(s)	798, 1022, 1583
AjiI	CACGTC	1 cut(s)	541
AjnI	CCWGG	3 cut(s)	515, 1326, 1612
AloI	GAACNNNNNNTCC	2 cut(s)	446, 478
AluBI	AGCT	9 cut(s)	145, 184, 232, 786, 1042, 1150, 1163, 1217, 1444
AluI	AGCT	9 cut(s)	145, 184, 232, 786, 1042, 1150, 1163, 1217, 1444
Alw21I	GWGCWC	1 cut(s)	1523
Alw26I	GTCTC	4 cut(s)	517, 704, 1128, 1442
Alw44I	GTGCAC	1 cut(s)	1519
AlwI	GGATC	6 cut(s)	125, 138, 584, 597, 899, 994
Ama87I	CYCGRG	1 cut(s)	1400
Aor13HI	TCCGGA	1 cut(s)	733
ApaLI	GTGCAC	1 cut(s)	1519
ApoI	RAATTY	3 cut(s)	20, 1333, 1432
Asp700I	GAANNNNTTC	2 cut(s)	20, 771
Asp718I	GGTACC	1 cut(s)	1172
AspLEI	GCGC	3 cut(s)	101, 1201, 1287
AspS9I	GGNCC	3 cut(s)	731, 1098, 1223
AsuHPI	GGTGA	4 cut(s)	421, 998, 1355, 1435
AsuII	TTCGAA	1 cut(s)	488
AvaI	CYCGRG	1 cut(s)	1400
AvaII	GGWCC	2 cut(s)	731, 1223
BaeGI	GKGCMC	5 cut(s)	1523, 1695, 1743, 1791, 1875
BalI	TGGCCA	1 cut(s)	329
BamHI	GGATCC	2 cut(s)	130, 589
BanI	GGYRCC	2 cut(s)	98, 1172
BauI	CACGAG	4 cut(s)	915, 1694, 1742, 1790
Bbv12I	GWGCWC	1 cut(s)	1523
BbvCI	CCTCAGC	1 cut(s)	1228
BccI	CCATC	3 cut(s)	941, 1060, 1420
BceAI	ACGGC	3 cut(s)	367, 612, 1448
BcgI	CGANNNNNNTGC	2 cut(s)	387, 421
BciT130I	CCWGG	3 cut(s)	517, 1328, 1614
BclI	TGATCA	1 cut(s)	610
BcoDI	GTCTC	4 cut(s)	517, 704, 1128, 1442
BfaI	CTAG	2 cut(s)	707, 1469
BfmI	CTRYAG	4 cut(s)	387, 952, 1439, 1455
BfoI	RGCGCY	2 cut(s)	102, 1202
BglI	GCCNNNNNGGC	1 cut(s)	326
Bme1390I	CCNGG	3 cut(s)	517, 1328, 1614
Bme18I	GGWCC	2 cut(s)	731, 1223
BmeT110I	CYCGRG	1 cut(s)	1400
BmgBI	CACGTC	1 cut(s)	541
BmgT120I	GGNCC	3 cut(s)	731, 1098, 1223
BmiI	GGNNCC	7 cut(s)	100, 132, 298, 591, 1100, 1174, 1225
BmrFI	CCNGG	3 cut(s)	517, 1328, 1614
BmrI	ACTGGG	2 cut(s)	1125, 1378
BmsI	GCATC	4 cut(s)	221, 448, 1196, 1274
BmuI	ACTGGG	2 cut(s)	1125, 1378
BplI	GAGNNNNNCTC	2 cut(s)	101, 133
BpmI	CTGGAG	1 cut(s)	1179
Bpu10I	CCTNAGC	1 cut(s)	1228
Bpu14I	TTCGAA	1 cut(s)	488
BpuEI	CTTGAG	6 cut(s)	179, 206, 512, 1097, 1143, 1466
BsaBI	GATNNNNATC	2 cut(s)	615, 807
BsaHI	GRCGYC	3 cut(s)	99, 377, 422
BsaI	GGTCTC	2 cut(s)	704, 1128
BsaJI	CCNNGG	8 cut(s)	87, 516, 600, 727, 816, 1327, 1562, 1613
BsaWI	WCCGGW	3 cut(s)	362, 733, 868
BsaXI	ACNNNNNCTCC	4 cut(s)	1407, 1437, 1584, 1614
Bsc4I	CCNNNNNNNGG	5 cut(s)	389, 733, 1116, 1208, 1530
Bse118I	RCCGGY	3 cut(s)	67, 565, 1180
Bse1I	ACTGG	4 cut(s)	652, 1120, 1171, 1373
Bse3DI	GCAATG	1 cut(s)	1041
Bse8I	GATNNNNATC	2 cut(s)	615, 807
BseAI	TCCGGA	1 cut(s)	733
BseBI	CCWGG	3 cut(s)	517, 1328, 1614
BseDI	CCNNGG	8 cut(s)	87, 516, 600, 727, 816, 1327, 1562, 1613
BseGI	GGATG	4 cut(s)	212, 337, 1071, 1624
BseJI	GATNNNNATC	2 cut(s)	615, 807
BseLI	CCNNNNNNNGG	5 cut(s)	389, 733, 1116, 1208, 1530
BseMI	GCAATG	1 cut(s)	1041
BseMII	CTCAG	2 cut(s)	987, 1242
BseNI	ACTGG	4 cut(s)	652, 1120, 1171, 1373
BseRI	GAGGAG	5 cut(s)	62, 707, 1307, 1310, 1605
BseSI	GKGCMC	5 cut(s)	1523, 1695, 1743, 1791, 1875
BseX3I	CGGCCG	4 cut(s)	54, 62, 501, 597
BseYI	CCCAGC	2 cut(s)	1003, 1799
BsgI	GTGCAG	1 cut(s)	963
Bsh1285I	CGRYCG	4 cut(s)	57, 65, 504, 600
BshNI	GGYRCC	2 cut(s)	98, 1172
BsiEI	CGRYCG	4 cut(s)	57, 65, 504, 600
BsiHKAI	GWGCWC	1 cut(s)	1523
BsiHKCI	CYCGRG	1 cut(s)	1400
BsiSI	CCGG	8 cut(s)	68, 107, 350, 363, 566, 734, 869, 1181
BslFI	GGGAC	2 cut(s)	586, 1209
BslI	CCNNNNNNNGG	5 cut(s)	389, 733, 1116, 1208, 1530
BsmAI	GTCTC	4 cut(s)	517, 704, 1128, 1442
BsmFI	GGGAC	2 cut(s)	586, 1209
Bso31I	GGTCTC	2 cut(s)	704, 1128
BsoBI	CYCGRG	1 cut(s)	1400
Bsp119I	TTCGAA	1 cut(s)	488
Bsp1286I	GDGCHC	5 cut(s)	1523, 1695, 1743, 1791, 1875
Bsp13I	TCCGGA	1 cut(s)	733
Bsp143I	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
BspCNI	CTCAG	2 cut(s)	988, 1241
BspEI	TCCGGA	1 cut(s)	733
BspHI	TCATGA	1 cut(s)	663
BspLI	GGNNCC	7 cut(s)	100, 132, 298, 591, 1100, 1174, 1225
BspMAI	CTGCAG	3 cut(s)	391, 956, 1443
BspPI	GGATC	6 cut(s)	125, 138, 584, 597, 899, 994
BspQI	GCTCTTC	1 cut(s)	302
BspT104I	TTCGAA	1 cut(s)	488
BspT107I	GGYRCC	2 cut(s)	98, 1172
BspTNI	GGTCTC	2 cut(s)	704, 1128
BsrBI	CCGCTC	2 cut(s)	59, 190
BsrDI	GCAATG	1 cut(s)	1041
BsrFI	RCCGGY	3 cut(s)	67, 565, 1180
BsrI	ACTGG	4 cut(s)	652, 1120, 1171, 1373
BssAI	RCCGGY	3 cut(s)	67, 565, 1180
BssECI	CCNNGG	8 cut(s)	87, 516, 600, 727, 816, 1327, 1562, 1613
BssMI	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
BssNI	GRCGYC	3 cut(s)	99, 377, 422
BssSI	CACGAG	4 cut(s)	915, 1694, 1742, 1790
BssT1I	CCWWGG	3 cut(s)	727, 816, 1562
Bst2BI	CACGAG	4 cut(s)	915, 1694, 1742, 1790
Bst2UI	CCWGG	3 cut(s)	517, 1328, 1614
Bst4CI	ACNGT	2 cut(s)	265, 1092
Bst6I	CTCTTC	4 cut(s)	237, 302, 853, 1659
BstACI	GRCGYC	3 cut(s)	99, 377, 422
BstBI	TTCGAA	1 cut(s)	488
BstDEI	CTNAG	3 cut(s)	303, 996, 1228
BstENI	CCTNNNNNAGG	1 cut(s)	1528
BstF5I	GGATG	4 cut(s)	212, 337, 1071, 1624
BstH2I	RGCGCY	2 cut(s)	102, 1202
BstHHI	GCGC	3 cut(s)	101, 1201, 1287
BstKTI	GATC	7 cut(s)	128, 133, 592, 613, 811, 894, 1002
BstMAI	GTCTC	4 cut(s)	517, 704, 1128, 1442
BstMBI	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
BstMCI	CGRYCG	4 cut(s)	57, 65, 504, 600
BstNI	CCWGG	3 cut(s)	517, 1328, 1614
BstNSI	RCATGY	1 cut(s)	909
BstSCI	CCNGG	3 cut(s)	515, 1326, 1612
BstSFI	CTRYAG	4 cut(s)	387, 952, 1439, 1455
BstSLI	GKGCMC	5 cut(s)	1523, 1695, 1743, 1791, 1875
BstX2I	RGATCY	3 cut(s)	130, 589, 999
BstYI	RGATCY	3 cut(s)	130, 589, 999
BstZI	CGGCCG	4 cut(s)	54, 62, 501, 597
BtrI	CACGTC	1 cut(s)	541
BtsCI	GGATG	4 cut(s)	212, 337, 1071, 1624
BtsI	GCAGTG	1 cut(s)	156
BtsIMutI	CAGTG	3 cut(s)	11, 156, 1088
CciI	TCATGA	1 cut(s)	663
CciNI	GCGGCCGC	1 cut(s)	54
CfoI	GCGC	3 cut(s)	101, 1201, 1287
Cfr10I	RCCGGY	3 cut(s)	67, 565, 1180
Cfr13I	GGNCC	3 cut(s)	731, 1098, 1223
CseI	GACGC	1 cut(s)	385
Csp6I	GTAC	5 cut(s)	544, 846, 909, 1173, 1603
CviQI	GTAC	5 cut(s)	544, 846, 909, 1173, 1603
DdeI	CTNAG	3 cut(s)	303, 996, 1228
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	7 cut(s)	127, 132, 591, 612, 810, 893, 1001
DpnII	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
DraI	TTTAAA	1 cut(s)	1305
DrdI	GACNNNNNNGTC	2 cut(s)	382, 1120
DseDI	GACNNNNNNGTC	2 cut(s)	382, 1120
EaeI	YGGCCR	5 cut(s)	54, 62, 327, 501, 597
EagI	CGGCCG	4 cut(s)	54, 62, 501, 597
Eam1104I	CTCTTC	4 cut(s)	237, 302, 853, 1659
EarI	CTCTTC	4 cut(s)	237, 302, 853, 1659
EclXI	CGGCCG	4 cut(s)	54, 62, 501, 597
Eco130I	CCWWGG	3 cut(s)	727, 816, 1562
Eco147I	AGGCCT	2 cut(s)	515, 1253
Eco31I	GGTCTC	2 cut(s)	704, 1128
Eco32I	GATATC	1 cut(s)	751
Eco47I	GGWCC	2 cut(s)	731, 1223
Eco52I	CGGCCG	4 cut(s)	54, 62, 501, 597
Eco57I	CTGAAG	2 cut(s)	228, 1558
Eco88I	CYCGRG	1 cut(s)	1400
EcoNI	CCTNNNNNAGG	1 cut(s)	1528
EcoRI	GAATTC	1 cut(s)	20
EcoRII	CCWGG	3 cut(s)	515, 1326, 1612
EcoRV	GATATC	1 cut(s)	751
EcoT14I	CCWWGG	3 cut(s)	727, 816, 1562
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	3 cut(s)	727, 816, 1562
FalI	AAGNNNNNCTT	2 cut(s)	759, 791
FaqI	GGGAC	2 cut(s)	586, 1209
FauI	CCCGC	1 cut(s)	682
FauNDI	CATATG	1 cut(s)	898
FbaI	TGATCA	1 cut(s)	610
FblI	GTMKAC	2 cut(s)	359, 1374
FokI	GGATG	4 cut(s)	199, 324, 1078, 1631
FspBI	CTAG	2 cut(s)	707, 1469
GlaI	GCGC	3 cut(s)	100, 1200, 1286
GsaI	CCCAGC	2 cut(s)	1007, 1803
GsuI	CTGGAG	1 cut(s)	1179
HaeII	RGCGCY	2 cut(s)	102, 1202
HapII	CCGG	8 cut(s)	68, 107, 350, 363, 566, 734, 869, 1181
HgaI	GACGC	1 cut(s)	385
HhaI	GCGC	3 cut(s)	101, 1201, 1287
Hin1I	GRCGYC	3 cut(s)	99, 377, 422
Hin6I	GCGC	3 cut(s)	99, 1199, 1285
HinP1I	GCGC	3 cut(s)	99, 1199, 1285
HincII	GTYRAC	1 cut(s)	1375
HindII	GTYRAC	1 cut(s)	1375
HindIII	AAGCTT	1 cut(s)	143
HpaII	CCGG	8 cut(s)	68, 107, 350, 363, 566, 734, 869, 1181
HphI	GGTGA	4 cut(s)	421, 998, 1355, 1435
Hpy166II	GTNNAC	9 cut(s)	268, 360, 412, 544, 550, 1375, 1521, 1603, 1735
Hpy8I	GTNNAC	9 cut(s)	268, 360, 412, 544, 550, 1375, 1521, 1603, 1735
Hpy99I	CGWCG	5 cut(s)	76, 124, 139, 424, 427
HpyAV	CCTTC	4 cut(s)	484, 761, 1055, 1646
HpyCH4III	ACNGT	2 cut(s)	265, 1092
HpyCH4IV	ACGT	5 cut(s)	422, 477, 540, 546, 669
HpyF3I	CTNAG	3 cut(s)	303, 996, 1228
HpySE526I	ACGT	5 cut(s)	422, 477, 540, 546, 669
Hsp92I	GRCGYC	3 cut(s)	99, 377, 422
HspAI	GCGC	3 cut(s)	99, 1199, 1285
KasI	GGCGCC	1 cut(s)	98
Kpn2I	TCCGGA	1 cut(s)	733
KpnI	GGTACC	1 cut(s)	1176
KroI	GCCGGC	2 cut(s)	67, 1180
KroNI	GCCGGC	2 cut(s)	69, 1182
Ksp22I	TGATCA	1 cut(s)	610
Kzo9I	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
LguI	GCTCTTC	1 cut(s)	302
LmnI	GCTCC	2 cut(s)	871, 1214
LweI	GCATC	4 cut(s)	221, 448, 1196, 1274
MaeI	CTAG	2 cut(s)	707, 1469
MaeII	ACGT	5 cut(s)	422, 477, 540, 546, 669
MaeIII	GTNAC	2 cut(s)	373, 917
MalI	GATC	7 cut(s)	127, 132, 591, 612, 810, 893, 1001
MbiI	CCGCTC	2 cut(s)	59, 190
MboI	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
MfeI	CAATTG	1 cut(s)	852
MflI	RGATCY	3 cut(s)	130, 589, 999
MhlI	GDGCHC	5 cut(s)	1523, 1695, 1743, 1791, 1875
MlsI	TGGCCA	1 cut(s)	329
MluCI	AATT	7 cut(s)	20, 323, 852, 1022, 1333, 1394, 1432
MluNI	TGGCCA	1 cut(s)	329
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	6 cut(s)	110, 161, 250, 263, 519, 568
MmeI	TCCRAC	2 cut(s)	617, 953
Mox20I	TGGCCA	1 cut(s)	329
MreI	CGCCGGCG	1 cut(s)	67
MroI	TCCGGA	1 cut(s)	733
MroNI	GCCGGC	2 cut(s)	67, 1180
MroXI	GAANNNNTTC	2 cut(s)	20, 771
MscI	TGGCCA	1 cut(s)	329
MseI	TTAA	3 cut(s)	789, 1275, 1304
Msp20I	TGGCCA	1 cut(s)	329
MspA1I	CMGCKG	2 cut(s)	1724, 1910
MspI	CCGG	8 cut(s)	68, 107, 350, 363, 566, 734, 869, 1181
MspR9I	CCNGG	3 cut(s)	517, 1328, 1614
MunI	CAATTG	1 cut(s)	852
MvaI	CCWGG	3 cut(s)	517, 1328, 1614
NaeI	GCCGGC	2 cut(s)	69, 1182
NarI	GGCGCC	1 cut(s)	99
NdeI	CATATG	1 cut(s)	898
NdeII	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
NgoMIV	GCCGGC	2 cut(s)	67, 1180
NlaIV	GGNNCC	7 cut(s)	100, 132, 298, 591, 1100, 1174, 1225
NmeAIII	GCCGAG	2 cut(s)	40, 625
NmuCI	GTSAC	2 cut(s)	373, 917
NotI	GCGGCCGC	1 cut(s)	54
NspI	RCATGY	1 cut(s)	909
NspV	TTCGAA	1 cut(s)	488
PagI	TCATGA	1 cut(s)	663
PceI	AGGCCT	2 cut(s)	515, 1253
PciI	ACATGT	1 cut(s)	905
PciSI	GCTCTTC	1 cut(s)	302
PcsI	WCGNNNNNNNCGW	1 cut(s)	134
PdiI	GCCGGC	2 cut(s)	69, 1182
PdmI	GAANNNNTTC	2 cut(s)	20, 771
PfeI	GAWTC	5 cut(s)	455, 494, 803, 875, 882
PflFI	GACNNNGTC	1 cut(s)	421
PleI	GAGTC	6 cut(s)	110, 161, 250, 263, 519, 568
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	6 cut(s)	110, 161, 250, 263, 519, 568
PscI	ACATGT	1 cut(s)	905
Psp1406I	AACGTT	1 cut(s)	669
Psp6I	CCWGG	3 cut(s)	515, 1326, 1612
PspFI	CCCAGC	2 cut(s)	1003, 1799
PspGI	CCWGG	3 cut(s)	515, 1326, 1612
PspN4I	GGNNCC	7 cut(s)	100, 132, 298, 591, 1100, 1174, 1225
PspPI	GGNCC	3 cut(s)	731, 1098, 1223
PsrI	GAACNNNNNNTAC	2 cut(s)	1449, 1481
PstI	CTGCAG	3 cut(s)	391, 956, 1443
PsuI	RGATCY	3 cut(s)	130, 589, 999
PsyI	GACNNNGTC	1 cut(s)	421
RsaI	GTAC	5 cut(s)	545, 847, 910, 1174, 1604
RsaNI	GTAC	5 cut(s)	544, 846, 909, 1173, 1603
SalI	GTCGAC	1 cut(s)	1373
SapI	GCTCTTC	1 cut(s)	302
SaqAI	TTAA	3 cut(s)	789, 1275, 1304
Sau3AI	GATC	7 cut(s)	125, 130, 589, 610, 808, 891, 999
Sau96I	GGNCC	3 cut(s)	731, 1098, 1223
SchI	GAGTC	6 cut(s)	110, 161, 250, 263, 519, 568
ScrFI	CCNGG	3 cut(s)	517, 1328, 1614
SduI	GDGCHC	5 cut(s)	1523, 1695, 1743, 1791, 1875
SfaNI	GCATC	4 cut(s)	221, 448, 1196, 1274
SfcI	CTRYAG	4 cut(s)	387, 952, 1439, 1455
SfoI	GGCGCC	1 cut(s)	100
SfuI	TTCGAA	1 cut(s)	488
SgrAI	CRCCGGYG	1 cut(s)	67
SinI	GGWCC	2 cut(s)	731, 1223
SmlI	CTYRAG	6 cut(s)	185, 194, 527, 1076, 1158, 1445
SmoI	CTYRAG	6 cut(s)	185, 194, 527, 1076, 1158, 1445
Sse9I	AATT	7 cut(s)	20, 323, 852, 1022, 1333, 1394, 1432
SseBI	AGGCCT	2 cut(s)	515, 1253
SspDI	GGCGCC	1 cut(s)	98
SspMI	CTAG	2 cut(s)	707, 1469
StuI	AGGCCT	2 cut(s)	515, 1253
StyD4I	CCNGG	3 cut(s)	515, 1326, 1612
StyI	CCWWGG	3 cut(s)	727, 816, 1562
TaaI	ACNGT	2 cut(s)	265, 1092
TaiI	ACGT	5 cut(s)	425, 480, 543, 549, 672
TaqI	TCGA	9 cut(s)	5, 122, 137, 180, 488, 1046, 1374, 1539, 1647
TasI	AATT	7 cut(s)	20, 323, 852, 1022, 1333, 1394, 1432
TatI	WGTACW	1 cut(s)	908
TauI	GCSGC	7 cut(s)	56, 59, 67, 193, 382, 506, 1204
TfiI	GAWTC	5 cut(s)	455, 494, 803, 875, 882
Tru1I	TTAA	3 cut(s)	789, 1275, 1304
Tru9I	TTAA	3 cut(s)	789, 1275, 1304
TscAI	CASTG	3 cut(s)	18, 163, 1095
TseFI	GTSAC	2 cut(s)	373, 917
Tsp45I	GTSAC	2 cut(s)	373, 917
TspGWI	ACGGA	2 cut(s)	123, 570
TspRI	CASTG	3 cut(s)	18, 163, 1095
Tth111I	GACNNNGTC	1 cut(s)	421
VneI	GTGCAC	1 cut(s)	1519
VpaK11BI	GGWCC	2 cut(s)	731, 1223
XagI	CCTNNNNNAGG	1 cut(s)	1528
XapI	RAATTY	3 cut(s)	20, 1333, 1432
XceI	RCATGY	1 cut(s)	909
XmiI	GTMKAC	2 cut(s)	359, 1374
XmnI	GAANNNNTTC	2 cut(s)	20, 771
XspI	CTAG	2 cut(s)	707, 1469
ZraI	GACGTC	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.