Rorug02G0182600

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000713
Physical Location & Seq
Reverse (-)
16987897 .. 16991295
3399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0182600.1

Sequence Viewer

Length: 2358 bp
ATGACCTCCCTAAACCCCACTCCTCTTCTTCTTCTTCTACTTCTAACTCTTCTAGCTCAATGCTCTTCTGGGCTCGACACAGACGGTCTTCTTCTCCTCTCCTTCAAACTCTCTATCCTCCAAGACCCTCAGCGAGTTCTTCAAACTTGGAACCCCTACGATACAACACCATGTTCATGGCGAGGTGTGACCTGCGCCACAATTCTCACTCCTCCTGAGAATATCTTCTACCCTAGAGTCATAGGCCTAGCTCTGCCCAGCTCTGCGCTTGTGGGTTCGATCCCTGCCAATCTTGGCATGATCGAACACCTTCAAAGCCTCAATCTTTCCGACAATTCCCTCAATGGGTCTCTTCCACTGTCTCTGTTCAACGCAACCGAGCTTCAAGTTTTGGACTTGGCATTCAATCGAATACTTGGTCCGCTACCCGAAACCATTTCAGGGCCCAAAAAACTCCAGCTTCTTAACCTCTCTGATAATGCCTTGGAGGGGAAGATACCCAGTAATCTTGCTTCTCTGAGCAACTTGACTGTGATTTCTCTCAAGAACAATTACTTCTCCGGCGAAATTCCGACTGGGTTTGCAGCCGTGGAGGTTTTGGATCTGTCTTCGAATCTGATCAACGGATCTCTGCCGTCGGATTTCGGCGGCGACAGTCTCCGTTACTTTAACGTCTCCCACAACGGACTCTCCGGCGCAATCCCAGCTAACTTCGCCGAGAAAATTCCCGGTAATGCGACCCTTGATCTCTCCTTCAACAACCTCACCGGCGAAGTCCCGGAATCTCCGGCTTTCTTGAACCAGGAAACGGCGGCGTTTCGCGGCAACCCTGATCTGTGCGGCGAAGCAACCGAGAACAACCCGTGCCCTATTCCTTCTTCACCTTCTTCCAATGCACCCAATTCTCCTCCGGCTTTTGCCGCAATTCCCAGAACGAGAAATTCCACCAACGCAGATGAAACTTCGCCGGGATCGTCGGAAAAATCCCAATCCGGGCTCAAAGCGGCGACAATCGTCGGAATCGTGGCCGGCGACATTGCTGGGATTGCAATTATCGCGATGGTGTTCTTGTACATGTACAGATTGAGGAAGAAAAAGAAGGAGAAGGAGAAGACAACAAGCGGCGACGTCACTACGCTGAAGAAAGAGGCCAACCCAGTAGTGACGGATTGGTCTTCTTCTTCATCAGAATCAAGAGGGTTCACGCGGTGGTCTTGCTTGAGAAACAAGAAGGGCGAACCAGAGGAGCAGAGCTCCGATTCCAGCAGCTCTTACAGCGAAGAAGTTCAAACGGAGCAGAATGGTCAGAAGGGTAGTGAGAGTAAACGGCAAACAGAGCAAGAACAGAGCAAAGGCGGCACATTGGTGACCCTGGACGGCGAAAAGCAGCTAGAGCTCGAGACTCTGCTTAAAGCATCAGCTTACATTTTGGGTGCTACTGGTTCTAGTATAATGTACAAGGCGGTTTTGGAAGACGGGAGTAGTCTAGCGGTTCGGAGAATTGGCGAGCATAGTGTCGACCGGTTCAAGGATTTCGAGAACCAAATCCGGCTCGTAGCGAAATTGGTCCACCCAAATCTGGTTCGAGTTCGCGGGTTCTTTTGGGGAGTTGATGAAAAGCTCATCATCTATGATTTCGTCCCAAATGGCAGCCTCGCCAATGCTCGTTACAGGAAGGTGGGCTCGTCGCCTTGTCATCTACCATGGGAAGCGAGGTTGAGGATAGCCAAGGGGGTGGCCCGTGGGCTAGGGTACCTCCACGAGAAGAAGCACGTCCACGGGAATCTCAAGCCCACCAACATTCTCCTCGGCGCTGATATGGAGCCCAAAGTCGGTGATTTTGGCCTCGAGAGGCTCTTGTCCGGTGATACGAGCTACAAAATAGGGAGCTCGACTAGGAATTTCGGAAGCAAGAGGTCGACGGCTTCACGTGATAGCTTTCAAGATTTCGCGTTAGGGCCCAGTCCGGGCCCTAGTCCGAGCCCTAGCTCGATGGGGACGTCGCCCTATCATGCGCCCGAGTCACTTCGGAGCCTCAAGCCCCACCCCAAGTGGGATGTGTACTCATTTGGGGTCATATTGCTTGAGTTGATAACGGGAAAAGTTGTGGTTGTGGATGAGTTGGGCCAGGGTCTTGGGCTAGCCGTCGATGATCCGAACCGCGCTTTTCGGATGGCGGATATGGCGATTAGAGGCGAGTTGGAGGGCAAAGAGGAACCCTTACTGGCTCTCTTCAAGTTAGGGTACAGTTGTGCATCACCAGTTCCACAAAAGAGACCAGCAATGAAAGAAGCCCTACAAGTTCTTGAGAAATTTCCATGTTCACCTTCATCATCATATTATTATGGCCACTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

785

Amino Acids

84.76

Weight (kDa)

6.33

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 5.2e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 127 - 185 2.2e-07 Leucine rich repeat
Pkinase PF00069 477 - 767 5e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 492 - 629 6.1e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2356
AasI GACNNNNNNGTC 1 cut(s) 1171
AatII GACGTC 2 cut(s) 1131, 2003
Acc36I ACCTGC 1 cut(s) 200
Acc65I GGTACC 1 cut(s) 1752
AccB1I GGYRCC 1 cut(s) 1752
AccI GTMKAC 2 cut(s) 1518, 1919
AccII CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
AclWI GGATC 5 cut(s) 274, 609, 634, 979, 2147
AcoI YGGCCR 2 cut(s) 1026, 2347
AcsI RAATTY 5 cut(s) 567, 723, 940, 1900, 2312
AcuI CTGAAG 1 cut(s) 1160
AcvI CACGTG 1 cut(s) 1931
AcyI GRCGYC 2 cut(s) 1128, 2000
AdeI CACNNNGTG 1 cut(s) 1209
AfaI GTAC 6 cut(s) 1073, 1079, 1457, 1754, 2063, 2246
AflIII ACRYGT 1 cut(s) 1074
AgeI ACCGGT 1 cut(s) 1521
AjiI CACGTC 1 cut(s) 1774
AjnI CCWGG 3 cut(s) 801, 1371, 2127
AleI CACNNNNGTG 1 cut(s) 1364
Alw21I GWGCWC 3 cut(s) 1256, 1398, 1892
Alw26I GTCTC 6 cut(s) 354, 366, 662, 679, 1394, 2269
AlwI GGATC 5 cut(s) 274, 609, 634, 979, 2147
Ama87I CYCGRG 3 cut(s) 1397, 1847, 2018
ApaI GGGCCC 3 cut(s) 447, 1962, 1973
ApeKI GCWGC 4 cut(s) 584, 1266, 1387, 1650
ApoI RAATTY 5 cut(s) 567, 723, 940, 1900, 2312
ArsI GACNNNNNNTTYG 2 cut(s) 403, 435
AsiGI ACCGGT 1 cut(s) 1521
Asp700I GAANNNNTTC 3 cut(s) 224, 309, 1284
Asp718I GGTACC 1 cut(s) 1752
AspLEI GCGC 6 cut(s) 197, 268, 698, 1814, 2017, 2165
AsuC2I CCSGG 5 cut(s) 729, 779, 969, 994, 1968
AsuHPI GGTGA 7 cut(s) 757, 873, 1378, 1847, 1877, 2250, 2316
AsuII TTCGAA 1 cut(s) 611
AsuNHI GCTAGC 1 cut(s) 2140
AvaI CYCGRG 3 cut(s) 1397, 1847, 2018
AvaII GGWCC 2 cut(s) 419, 1567
BaeGI GKGCMC 4 cut(s) 447, 869, 1962, 1973
BaeI ACNNNNGTAYC 2 cut(s) 2236, 2269
BalI TGGCCA 1 cut(s) 2349
BanI GGYRCC 1 cut(s) 1752
BarI GAAGNNNNNNTAC 2 cut(s) 496, 528
BauI CACGAG 1 cut(s) 1760
BbrPI CACGTG 1 cut(s) 1931
BbsI GAAGAC 5 cut(s) 80, 600, 1118, 1167, 1479
Bbv12I GWGCWC 3 cut(s) 1256, 1398, 1892
BbvCI CCTCAGC 1 cut(s) 129
BbvI GCAGC 4 cut(s) 596, 1278, 1399, 1662
BccI CCATC 3 cut(s) 1054, 1987, 2167
BceAI ACGGC 7 cut(s) 572, 619, 825, 1343, 1393, 1938, 2129
BciT130I CCWGG 3 cut(s) 803, 1373, 2129
BclI TGATCA 1 cut(s) 618
BcnI CCSGG 5 cut(s) 729, 779, 969, 994, 1968
BcoDI GTCTC 6 cut(s) 354, 366, 662, 679, 1394, 2269
BfoI RGCGCY 1 cut(s) 1815
BfuAI ACCTGC 1 cut(s) 200
Bme1390I CCNGG 8 cut(s) 729, 779, 803, 969, 994, 1373, 1968, 2129
Bme18I GGWCC 2 cut(s) 419, 1567
BmeT110I CYCGRG 3 cut(s) 1397, 1847, 2018
BmgBI CACGTC 1 cut(s) 1774
BmiI GGNNCC 8 cut(s) 152, 445, 1754, 1824, 1960, 1971, 2033, 2217
BmrFI CCNGG 8 cut(s) 729, 779, 803, 969, 994, 1373, 1968, 2129
BmrI ACTGGG 4 cut(s) 495, 585, 1151, 1956
BmsI GCATC 2 cut(s) 1424, 2264
BmtI GCTAGC 1 cut(s) 2144
BmuI ACTGGG 4 cut(s) 495, 585, 1151, 1956
BoxI GACNNNNGTC 1 cut(s) 1013
BpiI GAAGAC 5 cut(s) 80, 600, 1118, 1167, 1479
BplI GAGNNNNNCTC 2 cut(s) 1238, 1270
BpmI CTGGAG 1 cut(s) 440
Bpu10I CCTNAGC 1 cut(s) 129
Bpu14I TTCGAA 1 cut(s) 611
BpuEI CTTGAG 6 cut(s) 527, 1240, 1772, 2021, 2105, 2327
BpuMI CCSGG 5 cut(s) 729, 779, 969, 994, 1968
BsaAI YACGTR 1 cut(s) 1931
BsaHI GRCGYC 2 cut(s) 1128, 2000
BsaI GGTCTC 2 cut(s) 354, 2269
BsaJI CCNNGG 9 cut(s) 483, 588, 1371, 1703, 1728, 1741, 1777, 1807, 2128
BsaWI WCCGGW 2 cut(s) 1521, 1862
BsaXI ACNNNNNCTCC 2 cut(s) 674, 704
Bse118I RCCGGY 3 cut(s) 767, 1028, 1521
Bse1I ACTGG 7 cut(s) 501, 580, 1157, 1444, 1962, 2229, 2261
Bse3DI GCAATG 2 cut(s) 1035, 2289
BseBI CCWGG 3 cut(s) 803, 1373, 2129
BseDI CCNNGG 9 cut(s) 483, 588, 1371, 1703, 1728, 1741, 1777, 1807, 2128
BseGI GGATG 3 cut(s) 2062, 2122, 2178
BseMI GCAATG 2 cut(s) 1035, 2289
BseMII CTCAG 3 cut(s) 143, 207, 509
BseNI ACTGG 7 cut(s) 501, 580, 1157, 1444, 1962, 2229, 2261
BseRI GAGGAG 6 cut(s) 12, 86, 201, 897, 1259, 1796
BseSI GKGCMC 4 cut(s) 447, 869, 1962, 1973
BseXI GCAGC 4 cut(s) 596, 1278, 1399, 1662
BseYI CCCAGC 3 cut(s) 257, 703, 1040
Bsh1236I CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
Bsh1285I CGRYCG 1 cut(s) 1522
BshNI GGYRCC 1 cut(s) 1752
BshTI ACCGGT 1 cut(s) 1521
BsiEI CGRYCG 1 cut(s) 1522
BsiHKAI GWGCWC 3 cut(s) 1256, 1398, 1892
BsiHKCI CYCGRG 3 cut(s) 1397, 1847, 2018
BslFI GGGAC 3 cut(s) 761, 1625, 2011
BsmAI GTCTC 6 cut(s) 354, 366, 662, 679, 1394, 2269
BsmBI CGTCTC 1 cut(s) 679
BsmFI GGGAC 3 cut(s) 761, 1625, 2011
BsmI GAATGC 1 cut(s) 401
Bso31I GGTCTC 2 cut(s) 354, 2269
BsoBI CYCGRG 3 cut(s) 1397, 1847, 2018
Bsp119I TTCGAA 1 cut(s) 611
Bsp120I GGGCCC 3 cut(s) 443, 1958, 1969
Bsp1407I TGTACA 3 cut(s) 1071, 1077, 1455
Bsp143I GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
Bsp19I CCATGG 1 cut(s) 1703
Bsp68I TCGCGA 1 cut(s) 1058
BspCNI CTCAG 3 cut(s) 142, 208, 510
BspFNI CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
BspLI GGNNCC 8 cut(s) 152, 445, 1754, 1824, 1960, 1971, 2033, 2217
BspMI ACCTGC 1 cut(s) 200
BspOI GCTAGC 1 cut(s) 2144
BspPI GGATC 5 cut(s) 274, 609, 634, 979, 2147
BspQI GCTCTTC 1 cut(s) 70
BspT104I TTCGAA 1 cut(s) 611
BspT107I GGYRCC 1 cut(s) 1752
BspTNI GGTCTC 2 cut(s) 354, 2269
BsrDI GCAATG 2 cut(s) 1035, 2289
BsrFI RCCGGY 3 cut(s) 767, 1028, 1521
BsrGI TGTACA 3 cut(s) 1071, 1077, 1455
BsrI ACTGG 7 cut(s) 501, 580, 1157, 1444, 1962, 2229, 2261
BssAI RCCGGY 3 cut(s) 767, 1028, 1521
BssECI CCNNGG 9 cut(s) 483, 588, 1371, 1703, 1728, 1741, 1777, 1807, 2128
BssMI GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
BssNI GRCGYC 2 cut(s) 1128, 2000
BssSI CACGAG 1 cut(s) 1760
BssT1I CCWWGG 3 cut(s) 483, 1703, 1728
Bst2BI CACGAG 1 cut(s) 1760
Bst2UI CCWGG 3 cut(s) 803, 1373, 2129
Bst4CI ACNGT 5 cut(s) 86, 360, 532, 656, 2249
Bst6I CTCTTC 5 cut(s) 30, 54, 70, 357, 2237
BstACI GRCGYC 2 cut(s) 1128, 2000
BstAUI TGTACA 3 cut(s) 1071, 1077, 1455
BstBAI YACGTR 1 cut(s) 1931
BstBI TTCGAA 1 cut(s) 611
BstC8I GCNNGC 3 cut(s) 1030, 1508, 2142
BstDEI CTNAG 3 cut(s) 129, 216, 518
BstDSI CCRYGG 4 cut(s) 588, 1703, 1741, 1777
BstEII GGTNACC 1 cut(s) 1366
BstF5I GGATG 3 cut(s) 2062, 2122, 2178
BstFNI CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
BstH2I RGCGCY 1 cut(s) 1815
BstHHI GCGC 6 cut(s) 197, 268, 698, 1814, 2017, 2165
BstKTI GATC 9 cut(s) 282, 303, 604, 621, 629, 748, 835, 974, 2155
BstMAI GTCTC 6 cut(s) 354, 366, 662, 679, 1394, 2269
BstMBI GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
BstMCI CGRYCG 1 cut(s) 1522
BstNI CCWGG 3 cut(s) 803, 1373, 2129
BstNSI RCATGY 1 cut(s) 1078
BstPAI GACNNNNGTC 1 cut(s) 1013
BstPI GGTNACC 1 cut(s) 1366
BstSCI CCNGG 8 cut(s) 727, 777, 801, 967, 992, 1371, 1966, 2127
BstSLI GKGCMC 4 cut(s) 447, 869, 1962, 1973
BstUI CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
BstV1I GCAGC 4 cut(s) 596, 1278, 1399, 1662
BstV2I GAAGAC 5 cut(s) 80, 600, 1118, 1167, 1479
BstX2I RGATCY 2 cut(s) 601, 626
BstXI CCANNNNNNTGG 3 cut(s) 177, 1735, 2135
BstYI RGATCY 2 cut(s) 601, 626
BtgI CCRYGG 4 cut(s) 588, 1703, 1741, 1777
BtgZI GCGATG 1 cut(s) 1073
BtrI CACGTC 1 cut(s) 1774
BtsCI GGATG 3 cut(s) 2062, 2122, 2178
BtsIMutI CAGTG 1 cut(s) 356
BtuMI TCGCGA 1 cut(s) 1058
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 3 cut(s) 1030, 1508, 2142
CfoI GCGC 6 cut(s) 197, 268, 698, 1814, 2017, 2165
Cfr10I RCCGGY 3 cut(s) 767, 1028, 1521
Csp6I GTAC 6 cut(s) 1072, 1078, 1456, 1753, 2062, 2245
CspAI ACCGGT 1 cut(s) 1521
CviAII CATG 7 cut(s) 171, 177, 298, 1075, 1704, 2012, 2319
CviQI GTAC 6 cut(s) 1072, 1078, 1456, 1753, 2062, 2245
DdeI CTNAG 3 cut(s) 129, 216, 518
DpnI GATC 9 cut(s) 281, 302, 603, 620, 628, 747, 834, 973, 2154
DpnII GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
DraIII CACNNNGTG 1 cut(s) 1209
DrdI GACNNNNNNGTC 1 cut(s) 1171
DseDI GACNNNNNNGTC 1 cut(s) 1171
EaeI YGGCCR 2 cut(s) 1026, 2347
Eam1104I CTCTTC 5 cut(s) 30, 54, 70, 357, 2237
EarI CTCTTC 5 cut(s) 30, 54, 70, 357, 2237
EciI GGCGGA 1 cut(s) 2192
Ecl136II GAGCTC 3 cut(s) 1254, 1396, 1890
Eco130I CCWWGG 3 cut(s) 483, 1703, 1728
Eco147I AGGCCT 1 cut(s) 246
Eco31I GGTCTC 2 cut(s) 354, 2269
Eco47I GGWCC 2 cut(s) 419, 1567
Eco53kI GAGCTC 3 cut(s) 1254, 1396, 1890
Eco57I CTGAAG 1 cut(s) 1160
Eco72I CACGTG 1 cut(s) 1931
Eco88I CYCGRG 3 cut(s) 1397, 1847, 2018
Eco91I GGTNACC 1 cut(s) 1366
EcoICRI GAGCTC 3 cut(s) 1254, 1396, 1890
EcoO109I RGGNCCY 3 cut(s) 443, 1958, 1970
EcoO65I GGTNACC 1 cut(s) 1366
EcoRII CCWGG 3 cut(s) 801, 1371, 2127
EcoT14I CCWWGG 3 cut(s) 483, 1703, 1728
ErhI CCWWGG 3 cut(s) 483, 1703, 1728
Esp3I CGTCTC 1 cut(s) 679
FaeI CATG 7 cut(s) 174, 180, 301, 1078, 1707, 2015, 2322
FaqI GGGAC 3 cut(s) 761, 1625, 2011
FatI CATG 7 cut(s) 170, 176, 297, 1074, 1703, 2011, 2318
FauI CCCGC 1 cut(s) 1586
FbaI TGATCA 1 cut(s) 618
FblI GTMKAC 2 cut(s) 1518, 1919
FokI GGATG 3 cut(s) 2069, 2129, 2185
GlaI GCGC 6 cut(s) 196, 267, 697, 1813, 2016, 2164
GsaI CCCAGC 3 cut(s) 261, 707, 1044
GsuI CTGGAG 1 cut(s) 440
HaeII RGCGCY 1 cut(s) 1815
HhaI GCGC 6 cut(s) 197, 268, 698, 1814, 2017, 2165
Hin1I GRCGYC 2 cut(s) 1128, 2000
Hin1II CATG 7 cut(s) 174, 180, 301, 1078, 1707, 2015, 2322
Hin6I GCGC 6 cut(s) 195, 266, 696, 1812, 2015, 2163
HinP1I GCGC 6 cut(s) 195, 266, 696, 1812, 2015, 2163
HincII GTYRAC 2 cut(s) 1519, 1920
HindII GTYRAC 2 cut(s) 1519, 1920
HphI GGTGA 7 cut(s) 757, 873, 1378, 1847, 1877, 2250, 2316
Hpy166II GTNNAC 8 cut(s) 1203, 1325, 1519, 1570, 1777, 1920, 2062, 2324
Hpy8I GTNNAC 8 cut(s) 1203, 1325, 1519, 1570, 1777, 1920, 2062, 2324
Hpy99I CGWCG 8 cut(s) 640, 979, 1019, 1130, 1690, 1924, 2005, 2150
HpyCH4III ACNGT 5 cut(s) 86, 360, 532, 656, 2249
HpyCH4IV ACGT 5 cut(s) 672, 1128, 1773, 1930, 2000
HpyCH4V TGCA 4 cut(s) 584, 896, 1049, 2255
HpyF3I CTNAG 3 cut(s) 129, 216, 518
HpySE526I ACGT 5 cut(s) 672, 1128, 1773, 1930, 2000
Hsp92I GRCGYC 2 cut(s) 1128, 2000
Hsp92II CATG 7 cut(s) 174, 180, 301, 1078, 1707, 2015, 2322
HspAI GCGC 6 cut(s) 195, 266, 696, 1812, 2015, 2163
KpnI GGTACC 1 cut(s) 1756
KroI GCCGGC 1 cut(s) 1028
KroNI GCCGGC 1 cut(s) 1030
Ksp22I TGATCA 1 cut(s) 618
Kzo9I GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 6 cut(s) 1246, 1259, 1294, 1822, 1887, 2031
Lsp1109I GCAGC 4 cut(s) 596, 1278, 1399, 1662
LweI GCATC 2 cut(s) 1424, 2264
MaeII ACGT 5 cut(s) 672, 1128, 1773, 1930, 2000
MaeIII GTNAC 7 cut(s) 187, 662, 1129, 1162, 1366, 1667, 2022
MalI GATC 9 cut(s) 281, 302, 603, 620, 628, 747, 834, 973, 2154
MboI GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
MflI RGATCY 2 cut(s) 601, 626
MlsI TGGCCA 1 cut(s) 2349
MluNI TGGCCA 1 cut(s) 2349
MlyI GAGTC 4 cut(s) 246, 681, 1396, 2030
MmeI TCCRAC 6 cut(s) 354, 596, 618, 957, 997, 2181
Mox20I TGGCCA 1 cut(s) 2349
MroNI GCCGGC 1 cut(s) 1028
MroXI GAANNNNTTC 3 cut(s) 224, 309, 1284
MscI TGGCCA 1 cut(s) 2349
MseI TTAA 3 cut(s) 465, 669, 1410
MslI CAYNNNNRTG 2 cut(s) 175, 1364
Msp20I TGGCCA 1 cut(s) 2349
MspR9I CCNGG 8 cut(s) 729, 779, 803, 969, 994, 1373, 1968, 2129
Mva1269I GAATGC 1 cut(s) 401
MvaI CCWGG 3 cut(s) 803, 1373, 2129
MvnI CGCG 6 cut(s) 822, 1058, 1207, 1593, 1952, 2163
NaeI GCCGGC 1 cut(s) 1030
NciI CCSGG 5 cut(s) 729, 779, 969, 994, 1968
NcoI CCATGG 1 cut(s) 1703
NdeII GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
NgoMIV GCCGGC 1 cut(s) 1028
NheI GCTAGC 1 cut(s) 2140
NlaIII CATG 7 cut(s) 174, 180, 301, 1078, 1707, 2015, 2322
NlaIV GGNNCC 8 cut(s) 152, 445, 1754, 1824, 1960, 1971, 2033, 2217
NmeAIII GCCGAG 2 cut(s) 742, 1788
NmuCI GTSAC 5 cut(s) 187, 1129, 1162, 1366, 2022
NruI TCGCGA 1 cut(s) 1058
NspI RCATGY 1 cut(s) 1078
NspV TTCGAA 1 cut(s) 611
OliI CACNNNNGTG 1 cut(s) 1364
PaeR7I CTCGAG 2 cut(s) 1397, 1847
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 1074
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 4 cut(s) 971, 1020, 1029, 1997
PctI GAATGC 1 cut(s) 401
PdiI GCCGGC 1 cut(s) 1030
PdmI GAANNNNTTC 3 cut(s) 224, 309, 1284
PfeI GAWTC 6 cut(s) 613, 782, 1020, 1190, 1259, 1783
PfoI TCCNGGA 1 cut(s) 777
PinAI ACCGGT 1 cut(s) 1521
PleI GAGTC 4 cut(s) 245, 681, 1396, 2029
PmaCI CACGTG 1 cut(s) 1931
PmlI CACGTG 1 cut(s) 1931
PpsI GAGTC 4 cut(s) 245, 681, 1396, 2029
Ppu21I YACGTR 1 cut(s) 1931
PscI ACATGT 1 cut(s) 1074
PshAI GACNNNNGTC 1 cut(s) 1013
PsiI TTATAA 1 cut(s) 2356
Psp124BI GAGCTC 3 cut(s) 1256, 1398, 1892
Psp6I CCWGG 3 cut(s) 801, 1371, 2127
PspCI CACGTG 1 cut(s) 1931
PspEI GGTNACC 1 cut(s) 1366
PspFI CCCAGC 3 cut(s) 257, 703, 1040
PspGI CCWGG 3 cut(s) 801, 1371, 2127
PspN4I GGNNCC 8 cut(s) 152, 445, 1754, 1824, 1960, 1971, 2033, 2217
PspOMI GGGCCC 3 cut(s) 443, 1958, 1969
PsuI RGATCY 2 cut(s) 601, 626
RruI TCGCGA 1 cut(s) 1058
RsaI GTAC 6 cut(s) 1073, 1079, 1457, 1754, 2063, 2246
RsaNI GTAC 6 cut(s) 1072, 1078, 1456, 1753, 2062, 2245
RseI CAYNNNNRTG 2 cut(s) 175, 1364
SacI GAGCTC 3 cut(s) 1256, 1398, 1892
SalI GTCGAC 2 cut(s) 1517, 1918
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 3 cut(s) 465, 669, 1410
Sau3AI GATC 9 cut(s) 279, 300, 601, 618, 626, 745, 832, 971, 2152
SchI GAGTC 4 cut(s) 246, 681, 1396, 2030
ScrFI CCNGG 8 cut(s) 729, 779, 803, 969, 994, 1373, 1968, 2129
SfaNI GCATC 2 cut(s) 1424, 2264
Sfr274I CTCGAG 2 cut(s) 1397, 1847
SfuI TTCGAA 1 cut(s) 611
SgrAI CRCCGGYG 1 cut(s) 767
SinI GGWCC 2 cut(s) 419, 1567
SlaI CTCGAG 2 cut(s) 1397, 1847
SmiMI CAYNNNNRTG 2 cut(s) 175, 1364
SmlI CTYRAG 8 cut(s) 542, 1219, 1397, 1787, 1847, 2036, 2084, 2306
SmoI CTYRAG 8 cut(s) 542, 1219, 1397, 1787, 1847, 2036, 2084, 2306
SseBI AGGCCT 1 cut(s) 246
SstI GAGCTC 3 cut(s) 1256, 1398, 1892
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 8 cut(s) 727, 777, 801, 967, 992, 1371, 1966, 2127
StyI CCWWGG 3 cut(s) 483, 1703, 1728
TaaI ACNGT 5 cut(s) 86, 360, 532, 656, 2249
TaiI ACGT 5 cut(s) 675, 1131, 1776, 1933, 2003
TatI WGTACW 4 cut(s) 1071, 1077, 1455, 2061
TauI GCSGC 8 cut(s) 651, 815, 825, 843, 923, 1007, 1125, 1359
TfiI GAWTC 6 cut(s) 613, 782, 1020, 1190, 1259, 1783
Tru1I TTAA 3 cut(s) 465, 669, 1410
Tru9I TTAA 3 cut(s) 465, 669, 1410
TscAI CASTG 1 cut(s) 363
TseFI GTSAC 5 cut(s) 187, 1129, 1162, 1366, 2022
TseI GCWGC 4 cut(s) 584, 1266, 1387, 1650
Tsp45I GTSAC 5 cut(s) 187, 1129, 1162, 1366, 2022
TspDTI ATGAA 6 cut(s) 165, 972, 1173, 1629, 2300, 2319
TspGWI ACGGA 5 cut(s) 639, 650, 699, 1181, 1307
TspRI CASTG 1 cut(s) 363
VpaK11BI GGWCC 2 cut(s) 419, 1567
XapI RAATTY 5 cut(s) 567, 723, 940, 1900, 2312
XceI RCATGY 1 cut(s) 1078
XhoI CTCGAG 2 cut(s) 1397, 1847
XmiI GTMKAC 2 cut(s) 1518, 1919
XmnI GAANNNNTTC 3 cut(s) 224, 309, 1284
ZraI GACGTC 2 cut(s) 1129, 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.