Rorug07G0333700

Fantastic Four meristem regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0002468
Physical Location & Seq
Forward (+)
36592621 .. 36601247
8627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0333700.1

Sequence Viewer

Length: 3147 bp
ATGTCGCAGTCGCTGGAGCTATTGCTGATACAATTCCTGATGCCGGACAACGACGCCCGGCGGCAAGCGGAGGACCAGATTAAGCGGCTGGCCAAAGACCCTCAGGTGGTCCCCGCTCTCGTTCAACACCTCCGCACCGCCAAGACTCCCAACGTTCGCCAACTCGCCGCCGTTCTTCTCCGCAAGAAGATCACCGGCCACTGGGCCAAGCTCTCTCCTCAGCTCAAGAACCTCGTCAAGCAGTCCCTCATTGAGAGCATCACCATGGAGCACAGTCCGCCGGTGAGGCGAGCCAGTGCTAATGTAGTTAGTGTCGTTGCAAAATATGCTGTCCCGGCTGGAGAATGGCCGGACTTGTTGCCCTTTCTGTTTCAATGCAGTCAGAGTGCGCAGGAGGAGCATAGAGAGGTGGCATTGATCCTTTTCAGCTCTTTGACTGAAACAATTGGGAATACGTTTCGACCACATTTCGCAGATTTGCAAGCTCTTCTTCTGAAATGCTTGCAGGATGAGACAAGCAACCGTGTCAGAGTTGCTGCACTCAAGGCAGTGGGGTCTTTTCTAGAATTCACTCATGATGGGACCGAAGTGGTCAAGTTTCGAGAATTCATTCCCAGCATTTTAAATGTATCAAGACAATGCCTTGCTGCTGGCGAAGAGGATGTTGCTGTAATTGCTTTTGAGATTTTTGACGAGTTGATTGAATCTCCTGCACCTCTTCTTGGGGAGTCTATTAAATCCATTGTGCAGTTCTCTCTTGAAGTTTGCTCAAGTCAAACTTTGGAGTCTAACACTCGTCATCAGGCAATCCAAATAATCTCATGGCTAGCAAAGTATAAATCCAAATCCCTTAAAAAGTATAAGCTCATCATTCCTATTCTGCAAATTATGTGCCCATTGCTTGCCGAATCAACTAATGGAGATGAAGATGATGATCTTGCTCCGGATCGAGCTGCTGCAGAAGTTATTGACACTATGGCTTTGAATATACCGAAGCAAGTCTTCAGTCCTGTTCTCGAATTTGCTTCTTTAAGCAGTCAGAATGCAAATCCCAAGTATAGGGAAGCTTCTGTTACTGCTTTAGGTGTCATTTCAGAGGGTTGTTTGGATTTGATGAAGGATAAGATGGAACCAGTTCTTCATGTTGTTTTAGGTGCTTTGAGAGATCCTGAGGAAATGGTCAGGGGAGCTGCTTCCTTTGCCTTGGGTCAGTTTGCTGAGCATTTACAGCCTGAAATTGTATCTCACTATGAAAGTGTACTACCCTGCATTTTGAATGCCCTTGAGGATGCATCTGACGAAGTGAAGGAAAAGTCATATTATGCTTTGGCTGCATTTTGTGAGAACATGGGTGAGGAAATACTTCCATTCCTTGATCCCTTGATGGGGAAACTACTAGGGGCTCTCCATAGTAGCCCTCGTAATTTGCAGGAGACATGCATGTCTGCAATTGGTTCAGTTGCTTCTGCTGCAGAACAAGCCTTTGTTCCATATGCCGAAAGGGTTTTGGAGTTGATGAAGAGTTTCTTGGTGCTTACTAATGATGAGGATCTCTGTTCACGAGCAAGAGCTACTGAATTAGTTGGAATAGTTGCGATGTCTGTGGGGAGAACTGGGATGGAACCAATTTTGCCCCCTTATATAGAAGCTGCAATTTCTGGTTTTGGATTGGAATTTAGTGAGCTTCGAGAATATACTCATGGATTCTTCAGTAATGTTGCAGAAATTTTGGATGAAGGTTTTATACAGTATCTTCCTCATGTTGTCCCCCTGGCATTTTCCTCCTGCAATCTTGATGATGGCTCTGCAGTGGACATCGATGAGTCTGATGACGAAAATATTAATGGATTTGGTGGAGTTTCATCCGATGACGAAGCTCATGATGAACCAAGAGTACGAAATATCAGTGTAAGAACAGGAGTTTTGGATGAAAAGGCTGCTGCGACTCAAGCTCTTGGCTTATTTGCGCAGCATACAAAGACTTCATATGGACCCTATTTGGAGGAGTCATTGAAGATTCTAATTAGACACTCAGGTTATTTTCATGAAGATGTTCGGCTTCAGGCAATCATTGCCTTGAAACATATTTTAACAGCAGCACATGCGATATACCAGAATCATAATGAAGGAGAAGCAAAGGCTAAAGAAGTACTAGATACTGTCATGAATATTTATATCAAGACTATGACTGAAGATGATGACAAGGAAGTGGTTGCTCAAGCTTGTATGAGTCTTGCTGACATCATCAAAGATTTTGGATATATGGCGATTGAACCCTATATGTCTCGGCTGGTCGATGCTACTTTGGTACTGCTTCAGGAGAAATCAGCTTGTCAGCAGATAGCATCTGATGATGAAATTGATGATGGTGATGTTGAACATGATGAAGAGCTCATGGATGCAGTCTCTGACCTGCTCCCTGCCTTTGCCAAGTCAATGGGTCCTCATTTTGCATCTAATTTTGCAAAACTTTTCGGCCCTTTAATGGAATTTGCGAGAGCTTCACGCCCATTGCAAGATCGGACCATGGTTGTTGCCTGCCTTGCTGAAGTTGCTCAGAACATGGGTGCTCCAATTGCAGCATATGTTGATAATGTGATGCCCTTGGTACTCAAGGAACTATCATCCTCAGACTCAACCAATAGGAGGAATGCTGCATTTTGTGTTGGAGAGTTGTGCAGAAATGGGGGTGAGGGGACATTCAAATACTATGGAGATATATTACGTCGGCTTTCCCCACTATTTGGGGAATCTGAGCCAGATAATGCTGTCAGGGATAATGCAGCTGGTGCAGTTGCAAGAATGATAATGGTGCACCCTGAGCTTATCCCATTGAATGAGGTACTTCCTGTTTTTTTGAAAGTTCTTCCATTAAAAGAAGATCATGAGGAGTCCATGGCAGTGTACACTTGCATCTCTACTCTTGTTTTATCATCTAATGCTGAGATTCTTTCTCTGGTCCCTGAGTTGGTCAATGTATTTGCTCAAGTTGTGGCATCACCACTTGAAACTACCGAGGTCAAAGCACATGCAGGCAGAGCTTTTTCTCACCTGATTTCAATCTATGGTCATCAAATGCAGCCCCTTCTGAACAATCTCTCCCCTCAACATGCCAATGCCCTTGCTGCATTTGCCCCCAAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAF

Protein Analysis

1048

Amino Acids

115.09

Weight (kDa)

4.86

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 23 - 87 2.7e-15 Importin-beta N-terminal domain
TPR_IPO5 PF25780 93 - 251 1.3e-33 IPO5-like, TPR repeats
HEAT_GCN1 PF23271 273 - 447 2.5e-06 Stalled ribosome sensor GCN1-like, HEAT repeats
TOR1L1_N PF24714 318 - 535 9.5e-11 TORTIFOLIA1 N-terminal
HEAT_EZ PF13513 351 - 405 9.2e-08 HEAT-like repeat
TPR_IMB1 PF25574 380 - 514 1.9e-10 Importin subunit beta-1-like, TPR repeats
HEAT_MROH2B_C PF23227 380 - 517 3.9e-06 MROH2B-like, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1441
Acc16I TGCGCA 2 cut(s) 390, 1968
Acc36I ACCTGC 1 cut(s) 2421
AccB7I CCANNNNNTGG 1 cut(s) 2744
AccBSI CCGCTC 1 cut(s) 116
AccIII TCCGGA 1 cut(s) 943
AciI CCGC 9 cut(s) 61, 68, 85, 114, 133, 138, 168, 181, 278
AclI AACGTT 1 cut(s) 153
AclWI GGATC 5 cut(s) 412, 954, 1160, 1370, 1557
AcoI YGGCCR 3 cut(s) 90, 196, 347
AcsI RAATTY 6 cut(s) 566, 605, 1019, 1673, 1725, 2489
AcuI CTGAAG 6 cut(s) 988, 1693, 2045, 2211, 2300, 2568
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 7 cut(s) 1260, 1896, 2151, 2310, 2610, 2844, 2906
AjnI CCWGG 1 cut(s) 1770
AjuI GAANNNNNNNTTGG 2 cut(s) 1511, 1543
AloI GAACNNNNNNTCC 2 cut(s) 3083, 3115
Alw21I GWGCWC 4 cut(s) 273, 2394, 2572, 2817
Alw26I GTCTC 4 cut(s) 506, 1427, 2289, 2410
Alw44I GTGCAC 1 cut(s) 2813
AlwI GGATC 5 cut(s) 412, 954, 1160, 1370, 1557
AlwNI CAGNNNCTG 2 cut(s) 13, 2408
Aor13HI TCCGGA 1 cut(s) 943
AoxI GGCC 5 cut(s) 90, 196, 204, 347, 2476
ApaLI GTGCAC 1 cut(s) 2813
ApoI RAATTY 6 cut(s) 566, 605, 1019, 1673, 1725, 2489
AseI ATTAAT 1 cut(s) 1842
Asp700I GAANNNNTTC 5 cut(s) 609, 1134, 1362, 1523, 2052
AspLEI GCGC 2 cut(s) 391, 1969
AspS9I GGNCC 9 cut(s) 73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
AsuC2I CCSGG 2 cut(s) 58, 335
AsuHPI GGTGA 8 cut(s) 184, 253, 295, 1364, 2381, 2702, 2991, 3041
AsuNHI GCTAGC 1 cut(s) 826
AvaII GGWCC 7 cut(s) 73, 109, 582, 1991, 2441, 2523, 2959
AxyI CCTNAGG 2 cut(s) 102, 1170
BaeGI GKGCMC 2 cut(s) 896, 2817
BalI TGGCCA 1 cut(s) 92
BanII GRGCYC 2 cut(s) 1405, 2394
BarI GAAGNNNNNNTAC 2 cut(s) 1728, 1760
BauI CACGAG 1 cut(s) 1560
BbsI GAAGAC 1 cut(s) 994
Bbv12I GWGCWC 4 cut(s) 273, 2394, 2572, 2817
BbvCI CCTCAGC 1 cut(s) 219
BccI CCATC 6 cut(s) 572, 1120, 1378, 1612, 1793, 2360
BceAI ACGGC 1 cut(s) 155
BciT130I CCWGG 1 cut(s) 1772
BcnI CCSGG 2 cut(s) 58, 335
BcoDI GTCTC 4 cut(s) 506, 1427, 2289, 2410
BfaI CTAG 4 cut(s) 563, 827, 1397, 2153
BfmI CTRYAG 3 cut(s) 957, 1470, 1806
BfuAI ACCTGC 1 cut(s) 2421
BglI GCCNNNNNGGC 1 cut(s) 286
BlpI GCTNAGC 1 cut(s) 1218
BmcAI AGTACT 1 cut(s) 2151
Bme1390I CCNGG 3 cut(s) 58, 335, 1772
Bme18I GGWCC 7 cut(s) 73, 109, 582, 1991, 2441, 2523, 2959
BmgT120I GGNCC 9 cut(s) 73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
BmiI GGNNCC 7 cut(s) 111, 583, 1131, 1623, 1993, 2442, 2961
BmrFI CCNGG 3 cut(s) 58, 335, 1772
BmrI ACTGGG 2 cut(s) 211, 1623
BmtI GCTAGC 1 cut(s) 830
BmuI ACTGGG 2 cut(s) 211, 1623
BpiI GAAGAC 1 cut(s) 994
BpmI CTGGAG 2 cut(s) 35, 360
Bpu10I CCTNAGC 2 cut(s) 219, 2820
Bpu1102I GCTNAGC 1 cut(s) 1218
BpuEI CTTGAG 8 cut(s) 209, 527, 754, 1304, 1932, 2202, 2597, 2970
BpuMI CCSGG 2 cut(s) 58, 335
Bsa29I ATCGAT 1 cut(s) 1818
BsaBI GATNNNNATC 3 cut(s) 933, 1548, 3059
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 7 cut(s) 264, 1203, 1770, 2526, 2604, 2895, 3015
BsaWI WCCGGW 1 cut(s) 943
BsaXI ACNNNNNCTCC 2 cut(s) 3083, 3113
Bse118I RCCGGY 2 cut(s) 194, 280
Bse1I ACTGG 4 cut(s) 206, 294, 1133, 1618
Bse21I CCTNAGG 2 cut(s) 102, 1170
Bse3DI GCAATG 3 cut(s) 896, 2070, 2510
Bse8I GATNNNNATC 3 cut(s) 933, 1548, 3059
BseAI TCCGGA 1 cut(s) 943
BseBI CCWGG 1 cut(s) 1772
BseCI ATCGAT 1 cut(s) 1818
BseDI CCNNGG 7 cut(s) 264, 1203, 1770, 2526, 2604, 2895, 3015
BseGI GGATG 9 cut(s) 514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BseJI GATNNNNATC 3 cut(s) 933, 1548, 3059
BseMI GCAATG 3 cut(s) 896, 2070, 2510
BseNI ACTGG 4 cut(s) 206, 294, 1133, 1618
BseRI GAGGAG 4 cut(s) 207, 410, 2018, 2903
BseSI GKGCMC 2 cut(s) 896, 2817
BseYI CCCAGC 1 cut(s) 614
BsgI GTGCAG 5 cut(s) 522, 696, 767, 2698, 2811
BshFI GGCC 5 cut(s) 92, 198, 206, 349, 2478
BshVI ATCGAT 1 cut(s) 1818
BsiHKAI GWGCWC 4 cut(s) 273, 2394, 2572, 2817
BsiSI CCGG 7 cut(s) 44, 58, 195, 281, 335, 350, 944
BslFI GGGAC 7 cut(s) 95, 229, 317, 595, 1751, 2710, 2945
BsmAI GTCTC 4 cut(s) 506, 1427, 2289, 2410
BsmFI GGGAC 7 cut(s) 95, 229, 317, 595, 1751, 2710, 2945
BsmI GAATGC 3 cut(s) 1048, 1282, 2656
BsnI GGCC 5 cut(s) 92, 198, 206, 349, 2478
Bsp1286I GDGCHC 6 cut(s) 273, 896, 1405, 2394, 2572, 2817
Bsp13I TCCGGA 1 cut(s) 943
Bsp1407I TGTACA 1 cut(s) 2904
Bsp143I GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Bsp1720I GCTNAGC 1 cut(s) 1218
Bsp19I CCATGG 3 cut(s) 264, 2526, 2895
BspACI CCGC 9 cut(s) 61, 68, 85, 114, 133, 138, 168, 181, 278
BspANI GGCC 5 cut(s) 92, 198, 206, 349, 2478
BspDI ATCGAT 1 cut(s) 1818
BspEI TCCGGA 1 cut(s) 943
BspHI TCATGA 5 cut(s) 574, 1879, 2044, 2163, 2884
BspLI GGNNCC 7 cut(s) 111, 583, 1131, 1623, 1993, 2442, 2961
BspMAI CTGCAG 3 cut(s) 961, 1474, 1810
BspMI ACCTGC 1 cut(s) 2421
BspOI GCTAGC 1 cut(s) 830
BspPI GGATC 5 cut(s) 412, 954, 1160, 1370, 1557
BspQI GCTCTTC 2 cut(s) 492, 2382
BsrBI CCGCTC 1 cut(s) 116
BsrDI GCAATG 3 cut(s) 896, 2070, 2510
BsrFI RCCGGY 2 cut(s) 194, 280
BsrGI TGTACA 1 cut(s) 2904
BsrI ACTGG 4 cut(s) 206, 294, 1133, 1618
BssAI RCCGGY 2 cut(s) 194, 280
BssECI CCNNGG 7 cut(s) 264, 1203, 1770, 2526, 2604, 2895, 3015
BssMI GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BssNI GRCGYC 1 cut(s) 54
BssSI CACGAG 1 cut(s) 1560
BssT1I CCWWGG 5 cut(s) 264, 1203, 2526, 2604, 2895
Bst2BI CACGAG 1 cut(s) 1560
Bst2UI CCWGG 1 cut(s) 1772
Bst4CI ACNGT 4 cut(s) 275, 524, 1749, 2161
Bst6I CTCTTC 5 cut(s) 492, 651, 723, 1514, 2382
BstACI GRCGYC 1 cut(s) 54
BstAPI GCANNNNNTGC 4 cut(s) 326, 2072, 2102, 2789
BstAUI TGTACA 1 cut(s) 2904
BstDSI CCRYGG 3 cut(s) 264, 2526, 2895
BstF5I GGATG 9 cut(s) 514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BstHHI GCGC 2 cut(s) 391, 1969
BstKTI GATC 9 cut(s) 192, 420, 937, 949, 1168, 1378, 1552, 2521, 2884
BstMAI GTCTC 4 cut(s) 506, 1427, 2289, 2410
BstMBI GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BstNI CCWGG 1 cut(s) 1772
BstNSI RCATGY 5 cut(s) 1440, 1444, 2105, 3032, 3113
BstSCI CCNGG 3 cut(s) 56, 333, 1770
BstSFI CTRYAG 3 cut(s) 957, 1470, 1806
BstSLI GKGCMC 2 cut(s) 896, 2817
BstV2I GAAGAC 1 cut(s) 994
BstX2I RGATCY 2 cut(s) 1165, 1549
BstXI CCANNNNNNTGG 1 cut(s) 2437
BstYI RGATCY 2 cut(s) 1165, 1549
Bsu15I ATCGAT 1 cut(s) 1818
Bsu36I CCTNAGG 2 cut(s) 102, 1170
BsuRI GGCC 5 cut(s) 92, 198, 206, 349, 2478
BsuTUI ATCGAT 1 cut(s) 1818
BtgI CCRYGG 3 cut(s) 264, 2526, 2895
BtgZI GCGATG 1 cut(s) 1610
BtsCI GGATG 9 cut(s) 514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BtsI GCAGTG 3 cut(s) 555, 1815, 2907
BtsIMutI CAGTG 6 cut(s) 199, 301, 555, 1815, 1912, 2907
BveI ACCTGC 1 cut(s) 2421
CaiI CAGNNNCTG 2 cut(s) 13, 2408
CciI TCATGA 5 cut(s) 574, 1879, 2044, 2163, 2884
CfoI GCGC 2 cut(s) 391, 1969
Cfr10I RCCGGY 2 cut(s) 194, 280
Cfr13I GGNCC 9 cut(s) 73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
ClaI ATCGAT 1 cut(s) 1818
CseI GACGC 1 cut(s) 62
Csp6I GTAC 7 cut(s) 1259, 1895, 2150, 2309, 2609, 2843, 2905
CviQI GTAC 7 cut(s) 1259, 1895, 2150, 2309, 2609, 2843, 2905
DpnI GATC 9 cut(s) 191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
DpnII GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
DraI TTTAAA 1 cut(s) 624
DrdI GACNNNNNNGTC 1 cut(s) 1441
DseDI GACNNNNNNGTC 1 cut(s) 1441
EaeI YGGCCR 3 cut(s) 90, 196, 347
Eam1104I CTCTTC 5 cut(s) 492, 651, 723, 1514, 2382
EarI CTCTTC 5 cut(s) 492, 651, 723, 1514, 2382
EciI GGCGGA 1 cut(s) 267
Ecl136II GAGCTC 1 cut(s) 2392
Eco130I CCWWGG 5 cut(s) 264, 1203, 2526, 2604, 2895
Eco24I GRGCYC 2 cut(s) 1405, 2394
Eco47I GGWCC 7 cut(s) 73, 109, 582, 1991, 2441, 2523, 2959
Eco53kI GAGCTC 1 cut(s) 2392
Eco57I CTGAAG 6 cut(s) 988, 1693, 2045, 2211, 2300, 2568
Eco81I CCTNAGG 2 cut(s) 102, 1170
EcoICRI GAGCTC 1 cut(s) 2392
EcoO109I RGGNCCY 1 cut(s) 2441
EcoRI GAATTC 2 cut(s) 566, 605
EcoRII CCWGG 1 cut(s) 1770
EcoT14I CCWWGG 5 cut(s) 264, 1203, 2526, 2604, 2895
EcoT22I ATGCAT 2 cut(s) 1294, 1442
EcoT38I GRGCYC 2 cut(s) 1405, 2394
ErhI CCWWGG 5 cut(s) 264, 1203, 2526, 2604, 2895
FalI AAGNNNNNCTT 8 cut(s) 474, 506, 763, 795, 986, 1018, 1511, 1543
FaqI GGGAC 7 cut(s) 95, 229, 317, 595, 1751, 2710, 2945
FauI CCCGC 1 cut(s) 121
FauNDI CATATG 3 cut(s) 1492, 1987, 2584
FokI GGATG 9 cut(s) 521, 674, 1301, 1630, 1745, 1849, 1940, 2411, 2611
FriOI GRGCYC 2 cut(s) 1405, 2394
FspBI CTAG 4 cut(s) 563, 827, 1397, 2153
FspI TGCGCA 2 cut(s) 390, 1968
GlaI GCGC 2 cut(s) 390, 1968
GsaI CCCAGC 1 cut(s) 618
GsuI CTGGAG 2 cut(s) 35, 360
HaeIII GGCC 5 cut(s) 92, 198, 206, 349, 2478
HapII CCGG 7 cut(s) 44, 58, 195, 281, 335, 350, 944
HgaI GACGC 1 cut(s) 62
HhaI GCGC 2 cut(s) 391, 1969
Hin1I GRCGYC 1 cut(s) 54
Hin6I GCGC 2 cut(s) 389, 1967
HinP1I GCGC 2 cut(s) 389, 1967
HindIII AAGCTT 2 cut(s) 1065, 2220
HpaII CCGG 7 cut(s) 44, 58, 195, 281, 335, 350, 944
HphI GGTGA 8 cut(s) 184, 253, 295, 1364, 2381, 2702, 2991, 3041
Hpy166II GTNNAC 6 cut(s) 1259, 1559, 1813, 2815, 2905, 2907
Hpy8I GTNNAC 6 cut(s) 1259, 1559, 1813, 2815, 2905, 2907
Hpy99I CGWCG 2 cut(s) 56, 2730
HpyAV CCTTC 5 cut(s) 1111, 1300, 1730, 2120, 3095
HpyCH4III ACNGT 4 cut(s) 275, 524, 1749, 2161
HpyCH4IV ACGT 3 cut(s) 153, 455, 2725
HpySE526I ACGT 3 cut(s) 153, 455, 2725
Hsp92I GRCGYC 1 cut(s) 54
HspAI GCGC 2 cut(s) 389, 1967
Kpn2I TCCGGA 1 cut(s) 943
Kzo9I GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
LguI GCTCTTC 2 cut(s) 492, 2382
LmnI GCTCC 7 cut(s) 16, 268, 397, 946, 1187, 2421, 2575
MaeI CTAG 4 cut(s) 563, 827, 1397, 2153
MaeII ACGT 3 cut(s) 153, 455, 2725
MaeIII GTNAC 1 cut(s) 1072
MalI GATC 9 cut(s) 191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
MbiI CCGCTC 1 cut(s) 116
MboI GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
MfeI CAATTG 3 cut(s) 444, 1449, 2574
MflI RGATCY 2 cut(s) 1165, 1549
MhlI GDGCHC 6 cut(s) 273, 896, 1405, 2394, 2572, 2817
MlsI TGGCCA 1 cut(s) 92
MluNI TGGCCA 1 cut(s) 92
MlyI GAGTC 9 cut(s) 139, 737, 794, 1832, 1939, 2015, 2239, 2627, 2900
MmeI TCCRAC 2 cut(s) 1564, 2647
Mox20I TGGCCA 1 cut(s) 92
Mph1103I ATGCAT 2 cut(s) 1294, 1442
MroI TCCGGA 1 cut(s) 943
MroXI GAANNNNTTC 5 cut(s) 609, 1134, 1362, 1523, 2052
MscI TGGCCA 1 cut(s) 92
MseI TTAA 9 cut(s) 81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
MslI CAYNNNNRTG 4 cut(s) 263, 2049, 2900, 3114
Msp20I TGGCCA 1 cut(s) 92
MspA1I CMGCKG 1 cut(s) 2786
MspI CCGG 7 cut(s) 44, 58, 195, 281, 335, 350, 944
MspR9I CCNGG 3 cut(s) 58, 335, 1772
MunI CAATTG 3 cut(s) 444, 1449, 2574
Mva1269I GAATGC 3 cut(s) 1048, 1282, 2656
MvaI CCWGG 1 cut(s) 1772
NciI CCSGG 2 cut(s) 58, 335
NcoI CCATGG 3 cut(s) 264, 2526, 2895
NdeI CATATG 3 cut(s) 1492, 1987, 2584
NdeII GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
NheI GCTAGC 1 cut(s) 826
NlaIV GGNNCC 7 cut(s) 111, 583, 1131, 1623, 1993, 2442, 2961
NmeAIII GCCGAG 1 cut(s) 2266
NsbI TGCGCA 2 cut(s) 390, 1968
NsiI ATGCAT 2 cut(s) 1294, 1442
NspI RCATGY 5 cut(s) 1440, 1444, 2105, 3032, 3113
PagI TCATGA 5 cut(s) 574, 1879, 2044, 2163, 2884
PciSI GCTCTTC 2 cut(s) 492, 2382
PctI GAATGC 3 cut(s) 1048, 1282, 2656
PdmI GAANNNNTTC 5 cut(s) 609, 1134, 1362, 1523, 2052
PfeI GAWTC 7 cut(s) 704, 908, 1704, 2017, 2116, 2750, 2947
PflMI CCANNNNNTGG 1 cut(s) 2744
PleI GAGTC 9 cut(s) 139, 736, 793, 1831, 1939, 2014, 2238, 2627, 2899
PpsI GAGTC 9 cut(s) 139, 736, 793, 1831, 1939, 2014, 2238, 2627, 2899
PpuMI RGGWCCY 1 cut(s) 2441
PshBI ATTAAT 1 cut(s) 1842
Psp124BI GAGCTC 1 cut(s) 2394
Psp1406I AACGTT 1 cut(s) 153
Psp5II RGGWCCY 1 cut(s) 2441
Psp6I CCWGG 1 cut(s) 1770
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 1 cut(s) 1770
PspN4I GGNNCC 7 cut(s) 111, 583, 1131, 1623, 1993, 2442, 2961
PspPI GGNCC 9 cut(s) 73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
PspPPI RGGWCCY 1 cut(s) 2441
PsrI GAACNNNNNNTAC 2 cut(s) 1878, 1910
PstI CTGCAG 3 cut(s) 961, 1474, 1810
PstNI CAGNNNCTG 2 cut(s) 13, 2408
PsuI RGATCY 2 cut(s) 1165, 1549
PvuII CAGCTG 1 cut(s) 2786
RsaI GTAC 7 cut(s) 1260, 1896, 2151, 2310, 2610, 2844, 2906
RsaNI GTAC 7 cut(s) 1259, 1895, 2150, 2309, 2609, 2843, 2905
RseI CAYNNNNRTG 4 cut(s) 263, 2049, 2900, 3114
SacI GAGCTC 1 cut(s) 2394
SapI GCTCTTC 2 cut(s) 492, 2382
SaqAI TTAA 9 cut(s) 81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
Sau3AI GATC 9 cut(s) 189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Sau96I GGNCC 9 cut(s) 73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
ScaI AGTACT 1 cut(s) 2151
SchI GAGTC 9 cut(s) 139, 737, 794, 1832, 1939, 2015, 2239, 2627, 2900
ScrFI CCNGG 3 cut(s) 58, 335, 1772
SduI GDGCHC 6 cut(s) 273, 896, 1405, 2394, 2572, 2817
SfcI CTRYAG 3 cut(s) 957, 1470, 1806
SgrAI CRCCGGYG 1 cut(s) 280
SinI GGWCC 7 cut(s) 73, 109, 582, 1991, 2441, 2523, 2959
SmiMI CAYNNNNRTG 4 cut(s) 263, 2049, 2900, 3114
SmlI CTYRAG 8 cut(s) 224, 542, 769, 1283, 1947, 2217, 2612, 2985
SmoI CTYRAG 8 cut(s) 224, 542, 769, 1283, 1947, 2217, 2612, 2985
SsiI CCGC 9 cut(s) 61, 68, 85, 114, 133, 138, 168, 181, 278
SspI AATATT 2 cut(s) 1840, 2170
SspMI CTAG 4 cut(s) 563, 827, 1397, 2153
SstI GAGCTC 1 cut(s) 2394
StyD4I CCNGG 3 cut(s) 56, 333, 1770
StyI CCWWGG 5 cut(s) 264, 1203, 2526, 2604, 2895
TaaI ACNGT 4 cut(s) 275, 524, 1749, 2161
TaiI ACGT 3 cut(s) 156, 458, 2728
TaqI TCGA 7 cut(s) 460, 601, 949, 1017, 1687, 1818, 2295
TaqII GACCGA 1 cut(s) 599
TatI WGTACW 3 cut(s) 1258, 2149, 2904
TauI GCSGC 3 cut(s) 64, 88, 170
TfiI GAWTC 7 cut(s) 704, 908, 1704, 2017, 2116, 2750, 2947
Tru1I TTAA 9 cut(s) 81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
Tru9I TTAA 9 cut(s) 81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
TscAI CASTG 6 cut(s) 206, 301, 555, 1815, 1912, 2907
TspRI CASTG 6 cut(s) 206, 301, 555, 1815, 1912, 2907
Van91I CCANNNNNTGG 1 cut(s) 2744
VneI GTGCAC 1 cut(s) 2813
VpaK11BI GGWCC 7 cut(s) 73, 109, 582, 1991, 2441, 2523, 2959
VspI ATTAAT 1 cut(s) 1842
XapI RAATTY 6 cut(s) 566, 605, 1019, 1673, 1725, 2489
XbaI TCTAGA 1 cut(s) 562
XceI RCATGY 5 cut(s) 1440, 1444, 2105, 3032, 3113
XmnI GAANNNNTTC 5 cut(s) 609, 1134, 1362, 1523, 2052
XspI CTAG 4 cut(s) 563, 827, 1397, 2153
ZrmI AGTACT 1 cut(s) 2151
Zsp2I ATGCAT 2 cut(s) 1294, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.