Mitochondrial outer membrane protein porin
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr0c29g0501151 RchiOBHm_Chr1g0314121 RchiOBHm_Chr3g0465601 RchiOBHm_Chr3g0471431 RchiOBHm_Chr4g0414901 |
| rosa_laevigata | RLG00000009299 RLG00000019736 RLG00000034336 |
| rosa_multiflora | Rmu_sc0008611.1_g000006 Rmu_sc0008990.1_g000005 Rmu_sc0016988.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00140650 Rroxscaffold_3G00232870 Rroxscaffold_4G00298360 Rroxscaffold_6G00410590 Rroxscaffold_7G00190580 |
| rosa_rugosa | Rorug05G0514000 Rorug06G0152500 |
| rosa_samantha | Rh1AG063100 Rh1CG057100 Rh1DG060900 Rh2AG300600 Rh2AG507500 Rh2AG675700 Rh2BG139500 Rh2BG251500 Rh2BG308300 Rh2DG324800 Rh3AG108200 Rh3BG141000 Rh3CG113900 Rh4AG220200 Rh5AG334300 Rh5AG484600 Rh5CG560700 Rh5DG220200 Rh6BG336400 Rh7AG393300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 321 |
| AcsI | RAATTY | 3 cut(s) | 80, 183, 339 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 60 |
| AgsI | TTSAA | 2 cut(s) | 95, 344 |
| AluBI | AGCT | 3 cut(s) | 24, 214, 245 |
| AluI | AGCT | 3 cut(s) | 24, 214, 245 |
| Alw21I | GWGCWC | 1 cut(s) | 126 |
| AlwI | GGATC | 1 cut(s) | 321 |
| ApoI | RAATTY | 3 cut(s) | 80, 183, 339 |
| AsuHPI | GGTGA | 1 cut(s) | 166 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 126 |
| BccI | CCATC | 1 cut(s) | 34 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 215 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 60 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 60 |
| BseYI | CCCAGC | 1 cut(s) | 271 |
| BsiHKAI | GWGCWC | 1 cut(s) | 126 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 126 |
| Bsp143I | GATC | 2 cut(s) | 46, 313 |
| BspPI | GGATC | 1 cut(s) | 321 |
| BspQI | GCTCTTC | 1 cut(s) | 114 |
| BssMI | GATC | 2 cut(s) | 46, 313 |
| Bst6I | CTCTTC | 2 cut(s) | 65, 114 |
| BstDEI | CTNAG | 1 cut(s) | 317 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 2 cut(s) | 49, 316 |
| BstMBI | GATC | 2 cut(s) | 46, 313 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 220 |
| BstX2I | RGATCY | 1 cut(s) | 313 |
| BstYI | RGATCY | 1 cut(s) | 313 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| BtsIMutI | CAGTG | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 233 |
| CviJI | RGCY | 5 cut(s) | 6, 24, 214, 245, 275 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 24, 214, 245, 275 |
| DdeI | CTNAG | 1 cut(s) | 317 |
| DpnI | GATC | 2 cut(s) | 48, 315 |
| DpnII | GATC | 2 cut(s) | 46, 313 |
| Eam1104I | CTCTTC | 2 cut(s) | 65, 114 |
| EarI | CTCTTC | 2 cut(s) | 65, 114 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| EcoRI | GAATTC | 1 cut(s) | 339 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| FaeI | CATG | 1 cut(s) | 236 |
| FaiI | YATR | 3 cut(s) | 27, 234, 260 |
| FatI | CATG | 1 cut(s) | 232 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| FokI | GGATG | 1 cut(s) | 56 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| FspBI | CTAG | 1 cut(s) | 215 |
| GsaI | CCCAGC | 1 cut(s) | 275 |
| Hin1II | CATG | 1 cut(s) | 236 |
| HinfI | GANTC | 4 cut(s) | 75, 134, 159, 251 |
| HphI | GGTGA | 1 cut(s) | 166 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| HpyAV | CCTTC | 3 cut(s) | 140, 239, 316 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 223 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 220 |
| HpyF3I | CTNAG | 1 cut(s) | 317 |
| Hsp92II | CATG | 1 cut(s) | 236 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 2 cut(s) | 46, 313 |
| LguI | GCTCTTC | 1 cut(s) | 114 |
| LpnPI | CCDG | 6 cut(s) | 34, 67, 98, 268, 285, 348 |
| MaeI | CTAG | 1 cut(s) | 215 |
| MaeIII | GTNAC | 1 cut(s) | 192 |
| MalI | GATC | 2 cut(s) | 48, 315 |
| MboI | GATC | 2 cut(s) | 46, 313 |
| MboII | GAAGA | 2 cut(s) | 82, 131 |
| MfeI | CAATTG | 1 cut(s) | 300 |
| MflI | RGATCY | 1 cut(s) | 313 |
| MhlI | GDGCHC | 2 cut(s) | 8, 126 |
| MluCI | AATT | 8 cut(s) | 80, 89, 95, 183, 300, 333, 339, 376 |
| MnlI | CCTC | 2 cut(s) | 26, 288 |
| MseI | TTAA | 5 cut(s) | 173, 237, 267, 359, 379 |
| MslI | CAYNNNNRTG | 1 cut(s) | 237 |
| MunI | CAATTG | 1 cut(s) | 300 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 220 |
| NdeII | GATC | 2 cut(s) | 46, 313 |
| NlaIII | CATG | 1 cut(s) | 236 |
| PciSI | GCTCTTC | 1 cut(s) | 114 |
| PfeI | GAWTC | 4 cut(s) | 75, 134, 159, 251 |
| PspFI | CCCAGC | 1 cut(s) | 271 |
| PsuI | RGATCY | 1 cut(s) | 313 |
| RseI | CAYNNNNRTG | 1 cut(s) | 237 |
| SapI | GCTCTTC | 1 cut(s) | 114 |
| SaqAI | TTAA | 5 cut(s) | 173, 237, 267, 359, 379 |
| Sau3AI | GATC | 2 cut(s) | 46, 313 |
| SduI | GDGCHC | 2 cut(s) | 8, 126 |
| SetI | ASST | 7 cut(s) | 26, 179, 216, 231, 247, 265, 327 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 237 |
| Sse9I | AATT | 8 cut(s) | 80, 89, 95, 183, 300, 333, 339, 376 |
| SspMI | CTAG | 1 cut(s) | 215 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TasI | AATT | 8 cut(s) | 80, 89, 95, 183, 300, 333, 339, 376 |
| TfiI | GAWTC | 4 cut(s) | 75, 134, 159, 251 |
| Tru1I | TTAA | 5 cut(s) | 173, 237, 267, 359, 379 |
| Tru9I | TTAA | 5 cut(s) | 173, 237, 267, 359, 379 |
| TscAI | CASTG | 1 cut(s) | 169 |
| TspDTI | ATGAA | 2 cut(s) | 221, 345 |
| TspRI | CASTG | 1 cut(s) | 169 |
| XapI | RAATTY | 3 cut(s) | 80, 183, 339 |
| XspI | CTAG | 1 cut(s) | 215 |