Rh2BG093600

12-oxophytodienoate reductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
7330732 .. 7330983
252 bp
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UTR
Exon/CDS
Intron
Rh2BG093600.1

Sequence Viewer

Length: 252 bp
ATGCTGATTTATCGTCTTGTGGCCGGGATTTTATCTCAAGCGAGCCCTGATTTGGTGTTGAGGTTTAAGCTGAATGCTCCTTTGAACAAGTATATTAAGGAAACTTTCTACACCAATGACCCTGTAGTTGGATGCACAGACTACCCTTTTCTTAACAGAGAAAGTGTGAAAGAGTATGAGCGTCCCTCCTTTGATTTTGATGCTGTTGAAATTGTTCTTGTTCGTTTGGATGAACAAAACCTTCACATATAG

Protein Analysis

83

Amino Acids

9.67

Weight (kDa)

4.96

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 21
AfiI CCNNNNNNNGG 2 cut(s) 52, 128
AgsI TTSAA 2 cut(s) 85, 209
AluBI AGCT 1 cut(s) 70
AluI AGCT 1 cut(s) 70
AoxI GGCC 1 cut(s) 21
Asp700I GAANNNNTTC 1 cut(s) 213
AsuC2I CCSGG 1 cut(s) 25
BanII GRGCYC 1 cut(s) 47
BcnI CCSGG 1 cut(s) 25
BfmI CTRYAG 1 cut(s) 123
Bme1390I CCNGG 1 cut(s) 25
BmrFI CCNGG 1 cut(s) 25
BmsI GCATC 2 cut(s) 122, 190
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 21
BpuMI CCSGG 1 cut(s) 25
Bsc4I CCNNNNNNNGG 2 cut(s) 52, 128
BseGI GGATG 2 cut(s) 137, 235
BseLI CCNNNNNNNGG 2 cut(s) 52, 128
BshFI GGCC 1 cut(s) 23
BsiSI CCGG 1 cut(s) 24
BslFI GGGAC 1 cut(s) 168
BslI CCNNNNNNNGG 2 cut(s) 52, 128
BsmFI GGGAC 1 cut(s) 168
BsmI GAATGC 1 cut(s) 79
BsnI GGCC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 47
BspANI GGCC 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 43
BstF5I GGATG 2 cut(s) 137, 235
BstSCI CCNGG 1 cut(s) 23
BstSFI CTRYAG 1 cut(s) 123
BsuRI GGCC 1 cut(s) 23
BtsCI GGATG 2 cut(s) 137, 235
Cac8I GCNNGC 1 cut(s) 43
CseI GACGC 1 cut(s) 170
CviJI RGCY 3 cut(s) 23, 45, 70
CviKI_1 RGCY 3 cut(s) 23, 45, 70
EaeI YGGCCR 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 47
EcoT38I GRGCYC 1 cut(s) 47
FaiI YATR 4 cut(s) 93, 177, 248, 250
FaqI GGGAC 1 cut(s) 168
FokI GGATG 2 cut(s) 144, 242
FriOI GRGCYC 1 cut(s) 47
HaeIII GGCC 1 cut(s) 23
HapII CCGG 1 cut(s) 24
HgaI GACGC 1 cut(s) 170
HpaII CCGG 1 cut(s) 24
HpyAV CCTTC 1 cut(s) 251
HpyCH4V TGCA 1 cut(s) 135
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 3 cut(s) 37, 60, 135
LweI GCATC 2 cut(s) 122, 190
MhlI GDGCHC 1 cut(s) 47
MluCI AATT 1 cut(s) 210
MmeI TCCRAC 1 cut(s) 109
MnlI CCTC 2 cut(s) 54, 196
MroXI GAANNNNTTC 1 cut(s) 213
MseI TTAA 3 cut(s) 66, 96, 153
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 1 cut(s) 25
Mva1269I GAATGC 1 cut(s) 79
NciI CCSGG 1 cut(s) 25
PctI GAATGC 1 cut(s) 79
PdmI GAANNNNTTC 1 cut(s) 213
SaqAI TTAA 3 cut(s) 66, 96, 153
ScrFI CCNGG 1 cut(s) 25
SduI GDGCHC 1 cut(s) 47
SetI ASST 3 cut(s) 65, 72, 243
SfaNI GCATC 2 cut(s) 122, 190
SfcI CTRYAG 1 cut(s) 123
SgeI CNNG 9 cut(s) 29, 36, 37, 50, 54, 59, 100, 134, 230
SmlI CTYRAG 1 cut(s) 36
SmoI CTYRAG 1 cut(s) 36
Sse9I AATT 1 cut(s) 210
StyD4I CCNGG 1 cut(s) 23
TasI AATT 1 cut(s) 210
Tru1I TTAA 3 cut(s) 66, 96, 153
Tru9I TTAA 3 cut(s) 66, 96, 153
TspDTI ATGAA 1 cut(s) 246
XmnI GAANNNNTTC 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.