Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001215

Physical Location & Seq

Genomic Coordinates Reverse (-)

28772563 .. 28775002

Gene Structure 2440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76670.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGAGAAACCGGAGAGCGAGAAGAAATCGGCGGTGTCTGATGTCGGTGCATGGGCTATGAATGTAATCAGCTCCGTTGGAATCATCATGGCTAATAAACAGCTCATGTCTTCCTCTGGTTTCGGTTTTGGCTTTGCTACAACGTTAACGGGATTTCACTTTGCATTCACTGCTCTTGTTGGTATGGTGTCAAACGCAACGGGACTATCAGCTTCTAAGCATGTTCCTCTTTGGGAGCTTCTCTGGTTCTCAATTGTTGCTAATATCTCTATCGCTGCTATGAACTTTAGTCTTATGCTCAACTCTGTTGGCTTCTATCAGATTTCGAAATTGAGCATGATTCCGGTGGTATGCGTGTTGGAATGGATTCTACATAGCAAGCATTATTGTAAAGAAGTGAAAGCTTCTGTAATGGTTGTGGTTATCGGTGTTGGGATTTGTACTGTGACTGATGTCAAAGTTAATGCCAAAGGTTTCATTTGTGCATGCACTGCCGTTTTCTCCACTTCTCTGCAGCAGATTTCTATAGGCTCTCTGCAGAAGAAGTACTCAGTAGGATCCTTTGAATTGCTGAGCAAAACTGCACCAATCCAAGCCATTTCACTTCTCATCTGTGGCCCCTTTGTTGACTATTTGTTGAGCGGCAAATTCATATCTACTTACCAGATGACTTATGGTGCCATCTTCTGCATTCTTCTCTCCTGTGCATTAGCCGTTTTCTGTAACATAAGCCAATATCTCTGCATCGGAAGATTCTCAGCGACATCTTTCCAAGTTCTAGGCCACATGAAAACAGTATGCGTCCTCACATTAGGATGGCTTCTCTTTGATTCCGAGATGACATTCAAGAACATCGCCGGGATGGCCATAGCCATTGTTGGAATGGTGATCTATAGTTGGGCTGTTGATATAGAGAAACAGAGGAACGCAAAGTCAACGCCACACGGCAAACACAGTATGACCGAAGATGAGATTAAGCTACTCAAAGAAGGAGTTGAGCATATCGACTTGAAAGACGTTGAACTCGGTGACACTAAACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0005215 GO:0005338 GO:0005457 GO:0005459 GO:0005460 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009058 GO:0009605 GO:0009607 GO:0009624 GO:0009791 GO:0009832 GO:0009833 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0012505 GO:0015075 GO:0015165 GO:0015291 GO:0015297 GO:0015711 GO:0015780 GO:0015783 GO:0015786 GO:0015931 GO:0015932 GO:0016020 GO:0022402 GO:0022414 GO:0022804 GO:0022857 GO:0031090 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0036080 GO:0042546 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048354 GO:0048359 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051301 GO:0051704 GO:0051707 GO:0055085 GO:0061458 GO:0061640 GO:0071554 GO:0071669 GO:0071702 GO:0071705 GO:0071840 GO:0072334 GO:0090480 GO:0090481 GO:0098588 GO:0098656 GO:0098791 GO:1901264 GO:1901505 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPT

Protein Analysis

347

Amino Acids

37.69

Weight (kDa)

8.22

Isoelectric Point (pI)

29.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPT	PF03151	25 - 299	4.6e-19	Triose-phosphate Transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21070 AT1G76670 AT1G76670 AT5G42420
fragaria_vesca	FvH4_2g17260 FvH4_2g17260 FvH4_5g26900 FvH4_5g26900
malus_domestica	MD05G1151400.v1.1 MD10G1145600.v1.1
prunus_persica	Prupe.8G184000_v2.0.a1 Prupe.8G184000_v2.0.a1 Prupe.8G184100_v2.0.a1
pyrus_communis	pycom05g14590
rosa_chinensis	RchiOBHm_Chr5g0006941 RchiOBHm_Chr5g0007051 RchiOBHm_Chr5g0007201 RchiOBHm_Chr5g0007361 RchiOBHm_Chr6g0281761 RchiOBHm_Chr7g0217841 RchiOBHm_Chr7g0217851 RchiOBHm_Chr7g0217941
rosa_laevigata	RLG00000002431 RLG00000012937
rosa_multiflora	Rmu_co8042740.1_g000001 Rmu_sc0002566.1_g000002 Rmu_sc0004530.1_g000002 Rmu_sc0012998.1_g000001 Rmu_sc0014282.1_g000009 Rmu_ssc0000126.1_g000047
rosa_roxburghii	Rroxscaffold_3G00241620 Rroxscaffold_3G00241650 Rroxscaffold_7G00186820
rosa_rugosa	Rorug04G0426000 Rorug06G0143500 Rorug07G0171700 Rorug07G0171800 Rorug07G0171900 Rorug07G0172000
rosa_samantha	Rh5CG061300 Rh6AG256200 Rh6BG259100 Rh6CG258100 Rh6DG250200 Rh7AG313000 Rh7AG313500 Rh7AG314400 Rh7BG304500
rosa_wichuraiana	Rw0G017280 Rw5G005110 Rw5G005150 Rw6G022210 Rw7G026510 Rw7G026540 Rw7G026580 Rw7G028220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	677
AccBSI	CCGCTC	1 cut(s)	642
AciI	CCGC	2 cut(s)	32, 642
AclI	AACGTT	1 cut(s)	143
AclWI	GGATC	2 cut(s)	552, 565
AcoI	YGGCCR	1 cut(s)	864
AcsI	RAATTY	1 cut(s)	647
AfaI	GTAC	2 cut(s)	442, 548
AgsI	TTSAA	4 cut(s)	566, 847, 1012, 1022
AluBI	AGCT	6 cut(s)	72, 103, 212, 238, 404, 979
AluI	AGCT	6 cut(s)	72, 103, 212, 238, 404, 979
AlwI	GGATC	2 cut(s)	552, 565
AoxI	GGCC	3 cut(s)	616, 781, 864
ApeKI	GCWGC	2 cut(s)	275, 514
ApoI	RAATTY	1 cut(s)	647
Asp700I	GAANNNNTTC	1 cut(s)	366
AspS9I	GGNCC	1 cut(s)	617
AsuC2I	CCSGG	1 cut(s)	859
AsuHPI	GGTGA	2 cut(s)	898, 1040
AsuII	TTCGAA	1 cut(s)	326
BalI	TGGCCA	1 cut(s)	866
BamHI	GGATCC	1 cut(s)	557
BanI	GGYRCC	1 cut(s)	677
BbsI	GAAGAC	1 cut(s)	102
BbvI	GCAGC	2 cut(s)	262, 526
BccI	CCATC	3 cut(s)	689, 810, 856
BceAI	ACGGC	3 cut(s)	479, 698, 961
BcnI	CCSGG	1 cut(s)	859
BfaI	CTAG	1 cut(s)	779
BfmI	CTRYAG	4 cut(s)	512, 525, 536, 892
BglI	GCCNNNNNGGC	1 cut(s)	863
BisI	GCNGC	3 cut(s)	276, 515, 643
BlpI	GCTNAGC	1 cut(s)	572
BlsI	GCNGC	3 cut(s)	277, 516, 644
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	1 cut(s)	859
BmgT120I	GGNCC	1 cut(s)	617
BmiI	GGNNCC	3 cut(s)	559, 619, 679
BmrFI	CCNGG	1 cut(s)	859
BmsI	GCATC	1 cut(s)	753
BoxI	GACNNNNGTC	1 cut(s)	452
BpiI	GAAGAC	1 cut(s)	102
Bpu1102I	GCTNAGC	1 cut(s)	572
Bpu14I	TTCGAA	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	859
BsaWI	WCCGGW	2 cut(s)	10, 343
BseGI	GGATG	2 cut(s)	821, 867
BseMII	CTCAG	3 cut(s)	563, 564, 771
BseXI	GCAGC	2 cut(s)	262, 526
BsgI	GTGCAG	1 cut(s)	567
BshFI	GGCC	3 cut(s)	618, 783, 866
BshNI	GGYRCC	1 cut(s)	677
BsiSI	CCGG	3 cut(s)	11, 344, 858
BslFI	GGGAC	1 cut(s)	216
BsmFI	GGGAC	1 cut(s)	216
BsmI	GAATGC	2 cut(s)	164, 690
BsnI	GGCC	3 cut(s)	618, 783, 866
Bsp119I	TTCGAA	1 cut(s)	326
Bsp143I	GATC	2 cut(s)	557, 888
Bsp1720I	GCTNAGC	1 cut(s)	572
BspACI	CCGC	2 cut(s)	32, 642
BspANI	GGCC	3 cut(s)	618, 783, 866
BspCNI	CTCAG	3 cut(s)	563, 564, 770
BspLI	GGNNCC	3 cut(s)	559, 619, 679
BspMAI	CTGCAG	2 cut(s)	516, 540
BspPI	GGATC	2 cut(s)	552, 565
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	1 cut(s)	677
BsrBI	CCGCTC	1 cut(s)	642
BssMI	GATC	2 cut(s)	557, 888
Bst4CI	ACNGT	3 cut(s)	445, 796, 956
BstAPI	GCANNNNNTGC	2 cut(s)	170, 491
BstBI	TTCGAA	1 cut(s)	326
BstC8I	GCNNGC	2 cut(s)	380, 487
BstDEI	CTNAG	4 cut(s)	216, 550, 572, 757
BstF5I	GGATG	2 cut(s)	821, 867
BstKTI	GATC	2 cut(s)	560, 891
BstMBI	GATC	2 cut(s)	557, 888
BstMWI	GCNNNNNNNGC	3 cut(s)	170, 491, 863
BstNSI	RCATGY	2 cut(s)	224, 489
BstPAI	GACNNNNGTC	1 cut(s)	452
BstSCI	CCNGG	1 cut(s)	857
BstSFI	CTRYAG	4 cut(s)	512, 525, 536, 892
BstV1I	GCAGC	2 cut(s)	262, 526
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	557
BstYI	RGATCY	1 cut(s)	557
BsuRI	GGCC	3 cut(s)	618, 783, 866
BtgZI	GCGATG	1 cut(s)	838
BtsCI	GGATG	2 cut(s)	821, 867
BtsI	GCAGTG	2 cut(s)	168, 489
BtsIMutI	CAGTG	2 cut(s)	168, 489
Cac8I	GCNNGC	2 cut(s)	380, 487
Cfr13I	GGNCC	1 cut(s)	617
CseI	GACGC	1 cut(s)	790
Csp6I	GTAC	2 cut(s)	441, 547
CviAII	CATG	7 cut(s)	51, 88, 106, 221, 337, 486, 787
CviQI	GTAC	2 cut(s)	441, 547
DdeI	CTNAG	4 cut(s)	216, 550, 572, 757
DpnI	GATC	2 cut(s)	559, 890
DpnII	GATC	2 cut(s)	557, 888
EaeI	YGGCCR	1 cut(s)	864
FaeI	CATG	7 cut(s)	54, 91, 109, 224, 340, 489, 790
FaqI	GGGAC	1 cut(s)	216
FatI	CATG	7 cut(s)	50, 87, 105, 220, 336, 485, 786
Fnu4HI	GCNGC	3 cut(s)	276, 515, 643
FokI	GGATG	2 cut(s)	828, 874
Fsp4HI	GCNGC	3 cut(s)	276, 515, 643
FspBI	CTAG	1 cut(s)	779
GluI	GCNGC	3 cut(s)	276, 515, 643
HaeIII	GGCC	3 cut(s)	618, 783, 866
HapII	CCGG	3 cut(s)	11, 344, 858
HgaI	GACGC	1 cut(s)	790
Hin1II	CATG	7 cut(s)	54, 91, 109, 224, 340, 489, 790
HincII	GTYRAC	3 cut(s)	147, 628, 936
HindII	GTYRAC	3 cut(s)	147, 628, 936
HindIII	AAGCTT	1 cut(s)	402
HinfI	GANTC	5 cut(s)	81, 340, 367, 753, 830
HpaI	GTTAAC	1 cut(s)	147
HpaII	CCGG	3 cut(s)	11, 344, 858
HphI	GGTGA	2 cut(s)	898, 1040
Hpy166II	GTNNAC	3 cut(s)	147, 628, 936
Hpy188I	TCNGA	4 cut(s)	40, 321, 749, 835
Hpy188III	TCNNGA	1 cut(s)	847
Hpy8I	GTNNAC	3 cut(s)	147, 628, 936
HpyAV	CCTTC	1 cut(s)	983
HpyCH4III	ACNGT	3 cut(s)	445, 796, 956
HpyCH4IV	ACGT	2 cut(s)	143, 1017
HpyF10VI	GCNNNNNNNGC	3 cut(s)	170, 491, 863
HpyF3I	CTNAG	4 cut(s)	216, 550, 572, 757
HpySE526I	ACGT	2 cut(s)	143, 1017
Hsp92II	CATG	7 cut(s)	54, 91, 109, 224, 340, 489, 790
KspAI	GTTAAC	1 cut(s)	147
Kzo9I	GATC	2 cut(s)	557, 888
LmnI	GCTCC	2 cut(s)	77, 235
LpnPI	CCDG	7 cut(s)	24, 102, 229, 357, 677, 715, 871
Lsp1109I	GCAGC	2 cut(s)	262, 526
LweI	GCATC	1 cut(s)	753
MaeI	CTAG	1 cut(s)	779
MaeII	ACGT	2 cut(s)	143, 1017
MaeIII	GTNAC	3 cut(s)	445, 722, 1028
MalI	GATC	2 cut(s)	559, 890
MbiI	CCGCTC	1 cut(s)	642
MboI	GATC	2 cut(s)	557, 888
MboII	GAAGA	7 cut(s)	34, 102, 553, 676, 686, 762, 977
MfeI	CAATTG	1 cut(s)	252
MflI	RGATCY	1 cut(s)	557
MlsI	TGGCCA	1 cut(s)	866
MluCI	AATT	4 cut(s)	252, 329, 566, 647
MluNI	TGGCCA	1 cut(s)	866
MmeI	TCCRAC	3 cut(s)	58, 339, 859
MnlI	CCTC	4 cut(s)	124, 237, 815, 915
Mox20I	TGGCCA	1 cut(s)	866
MroXI	GAANNNNTTC	1 cut(s)	366
MscI	TGGCCA	1 cut(s)	866
MseI	TTAA	3 cut(s)	146, 462, 975
MslI	CAYNNNNRTG	1 cut(s)	814
Msp20I	TGGCCA	1 cut(s)	866
MspI	CCGG	3 cut(s)	11, 344, 858
MspR9I	CCNGG	1 cut(s)	859
MunI	CAATTG	1 cut(s)	252
Mva1269I	GAATGC	2 cut(s)	164, 690
MwoI	GCNNNNNNNGC	3 cut(s)	170, 491, 863
NciI	CCSGG	1 cut(s)	859
NdeII	GATC	2 cut(s)	557, 888
NlaIII	CATG	7 cut(s)	54, 91, 109, 224, 340, 489, 790
NlaIV	GGNNCC	3 cut(s)	559, 619, 679
NmuCI	GTSAC	2 cut(s)	445, 1028
NspI	RCATGY	2 cut(s)	224, 489
NspV	TTCGAA	1 cut(s)	326
PaeI	GCATGC	1 cut(s)	489
PctI	GAATGC	2 cut(s)	164, 690
PdmI	GAANNNNTTC	1 cut(s)	366
PfeI	GAWTC	5 cut(s)	81, 340, 367, 753, 830
PkrI	GCNGC	3 cut(s)	277, 516, 644
PshAI	GACNNNNGTC	1 cut(s)	452
Psp1406I	AACGTT	1 cut(s)	143
PspN4I	GGNNCC	3 cut(s)	559, 619, 679
PspPI	GGNCC	1 cut(s)	617
PstI	CTGCAG	2 cut(s)	516, 540
PsuI	RGATCY	1 cut(s)	557
RsaI	GTAC	2 cut(s)	442, 548
RsaNI	GTAC	2 cut(s)	441, 547
RseI	CAYNNNNRTG	1 cut(s)	814
SaqAI	TTAA	3 cut(s)	146, 462, 975
SatI	GCNGC	3 cut(s)	276, 515, 643
Sau3AI	GATC	2 cut(s)	557, 888
Sau96I	GGNCC	1 cut(s)	617
ScaI	AGTACT	1 cut(s)	548
ScrFI	CCNGG	1 cut(s)	859
SetI	ASST	9 cut(s)	74, 105, 146, 214, 240, 406, 475, 981, 1020
SfaNI	GCATC	1 cut(s)	753
SfcI	CTRYAG	4 cut(s)	512, 525, 536, 892
SfuI	TTCGAA	1 cut(s)	326
SmiMI	CAYNNNNRTG	1 cut(s)	814
SphI	GCATGC	1 cut(s)	489
Sse9I	AATT	4 cut(s)	252, 329, 566, 647
SsiI	CCGC	2 cut(s)	32, 642
SspMI	CTAG	1 cut(s)	779
StyD4I	CCNGG	1 cut(s)	857
TaaI	ACNGT	3 cut(s)	445, 796, 956
TaiI	ACGT	2 cut(s)	146, 1020
TaqI	TCGA	2 cut(s)	326, 1005
TaqII	GACCGA	1 cut(s)	977
TasI	AATT	4 cut(s)	252, 329, 566, 647
TatI	WGTACW	2 cut(s)	440, 546
TauI	GCSGC	1 cut(s)	645
TfiI	GAWTC	5 cut(s)	81, 340, 367, 753, 830
Tru1I	TTAA	3 cut(s)	146, 462, 975
Tru9I	TTAA	3 cut(s)	146, 462, 975
TscAI	CASTG	2 cut(s)	175, 496
TseFI	GTSAC	2 cut(s)	445, 1028
TseI	GCWGC	2 cut(s)	275, 514
Tsp45I	GTSAC	2 cut(s)	445, 1028
TspDTI	ATGAA	5 cut(s)	74, 296, 466, 640, 803
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	2 cut(s)	175, 496
XapI	RAATTY	1 cut(s)	647
XceI	RCATGY	2 cut(s)	224, 489
XcmI	CCANNNNNNNNNTGG	2 cut(s)	671, 880
XmnI	GAANNNNTTC	1 cut(s)	366
XspI	CTAG	1 cut(s)	779
ZrmI	AGTACT	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.