Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001215

Physical Location & Seq

Genomic Coordinates Reverse (-)

18289184 .. 18291962

Gene Structure 2779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G184100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGAGAAGGAAAAGAAGTCTCCAGTTTCTGATGTAGGAGCATGGGGTATGAATATTGTGAGCTCTGTGGGCATTATCATGGCCAACAAGCAGCTCATGTCCCCTCACGGCTTTGCTTTTGGCTTTGCCACAACTTTGACTGGCTTTCACTTCTCTGTTACCGCATTGGTTGGTCTGGTGTCAAATGCCACTGGTTACTCTGCATCAAAGCATGTTCCTTTGTGGGAACTTGTTTGGTTCTCACTTGTAGCCAATGCTTCAATCACTGGAATGAACTTGAGTCTCATGCTCAACTCTGTTGGATTTTATCAGATATCGAAGCTGAGCATGATTCCCGTGGTATGCATGATGGAATGGATTATTCATGGAAAACATTTTTCAAGGGAGGTCAAGATGGCTGTGGCAGTGGTGGTTGTAGGTGTGGGAATATGTACAGTGACTGACGTGAAAGTTAATGCCAAAGGTTTCCTCTGTGCTTGTGTGGCTATCTTGTGTACATCCTTACAACAAATTTCAATAGGTTCCTTACAGAAGAAATACTCAATAGGCTCTTTCGAATTGCTTAGCAAGACAGCCCCAATCCAAGCTCTCTCCCTTCTTGTTCTTGGTCCATTCGTTGATTACTTTCTTACTGGAAAACTTCTGTCAGAGTACAAGTTTTCTTCTGGTGCATTTTTTTTCATACTACTCTCATGCTCCCTAGCCGTATTTTGCAACATCAGTCAGTACCTCTGCATTGGACGCTTCTCAGCAGTCTCGTTCCAGGTTTTAGGCCACATGAAAACAGTATGTGTCCTGACATTGGGGTGGCTACTCTTTGATTCACAGCTTACATTCAAAAACTTGCTCGGAATGGCTCTTGCGGTTCTTGGCATGATAGTGTACAGTTGGGCTGTGGAGGCTGAGAAGCAACCCAAGATCCTCCCTAGTACAAGAGACAATCTGTCAGAGGAGGACCTGAAACCATTGAAGGAGGGAATAGCAGAGAGTCCATTGAAAGACACAGAGCTTGGCGAGTCTAAGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0008150 GO:0012505 GO:0015291 GO:0015297 GO:0015780 GO:0015931 GO:0022804 GO:0022857 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0090480 GO:1901264

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPT

Protein Analysis

343

Amino Acids

37.12

Weight (kDa)

8.49

Isoelectric Point (pI)

33.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21070 AT1G76670 AT1G76670 AT5G42420
fragaria_vesca	FvH4_2g17260 FvH4_2g17260 FvH4_5g26900 FvH4_5g26900
malus_domestica	MD05G1151400.v1.1 MD10G1145600.v1.1
prunus_persica	Prupe.8G184000_v2.0.a1 Prupe.8G184000_v2.0.a1 Prupe.8G184100_v2.0.a1
pyrus_communis	pycom05g14590
rosa_chinensis	RchiOBHm_Chr5g0006941 RchiOBHm_Chr5g0007051 RchiOBHm_Chr5g0007201 RchiOBHm_Chr5g0007361 RchiOBHm_Chr6g0281761 RchiOBHm_Chr7g0217841 RchiOBHm_Chr7g0217851 RchiOBHm_Chr7g0217941
rosa_laevigata	RLG00000002431 RLG00000012937
rosa_multiflora	Rmu_co8042740.1_g000001 Rmu_sc0002566.1_g000002 Rmu_sc0004530.1_g000002 Rmu_sc0012998.1_g000001 Rmu_sc0014282.1_g000009 Rmu_ssc0000126.1_g000047
rosa_roxburghii	Rroxscaffold_3G00241620 Rroxscaffold_3G00241650 Rroxscaffold_7G00186820
rosa_rugosa	Rorug04G0426000 Rorug06G0143500 Rorug07G0171700 Rorug07G0171800 Rorug07G0171900 Rorug07G0172000
rosa_samantha	Rh5CG061300 Rh6AG256200 Rh6BG259100 Rh6CG258100 Rh6DG250200 Rh7AG313000 Rh7AG313500 Rh7AG314400 Rh7BG304500
rosa_wichuraiana	Rw0G017280 Rw5G005110 Rw5G005150 Rw6G022210 Rw7G026510 Rw7G026540 Rw7G026580 Rw7G028220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	162, 863
AclWI	GGATC	1 cut(s)	913
AcoI	YGGCCR	1 cut(s)	81
AcsI	RAATTY	1 cut(s)	510
AfaI	GTAC	6 cut(s)	433, 496, 653, 728, 884, 931
AfiI	CCNNNNNNNGG	1 cut(s)	802
AgsI	TTSAA	6 cut(s)	261, 381, 516, 838, 970, 997
AhdI	GACNNNNNGTC	1 cut(s)	943
AjiI	CACGTC	1 cut(s)	445
AjnI	CCWGG	1 cut(s)	762
AluBI	AGCT	6 cut(s)	63, 94, 322, 587, 829, 1009
AluI	AGCT	6 cut(s)	63, 94, 322, 587, 829, 1009
Alw21I	GWGCWC	1 cut(s)	65
Alw26I	GTCTC	4 cut(s)	24, 287, 760, 930
AlwI	GGATC	1 cut(s)	913
AlwNI	CAGNNNCTG	2 cut(s)	29, 440
AoxI	GGCC	2 cut(s)	81, 772
ApeKI	GCWGC	1 cut(s)	91
ApoI	RAATTY	1 cut(s)	510
AspS9I	GGNCC	2 cut(s)	608, 955
AsuII	TTCGAA	1 cut(s)	555
AvaII	GGWCC	2 cut(s)	608, 955
BalI	TGGCCA	1 cut(s)	83
BanII	GRGCYC	1 cut(s)	65
Bbv12I	GWGCWC	1 cut(s)	65
BbvI	GCAGC	1 cut(s)	103
BccI	CCATC	2 cut(s)	343, 388
BceAI	ACGGC	2 cut(s)	124, 689
BciT130I	CCWGG	1 cut(s)	764
BcoDI	GTCTC	4 cut(s)	24, 287, 760, 930
BfaI	CTAG	2 cut(s)	701, 927
BisI	GCNGC	1 cut(s)	92
BlpI	GCTNAGC	2 cut(s)	323, 563
BlsI	GCNGC	1 cut(s)	93
Bme1390I	CCNGG	1 cut(s)	764
Bme18I	GGWCC	2 cut(s)	608, 955
BmeRI	GACNNNNNGTC	1 cut(s)	943
BmgBI	CACGTC	1 cut(s)	445
BmgT120I	GGNCC	2 cut(s)	608, 955
BmiI	GGNNCC	1 cut(s)	523
BmrFI	CCNGG	1 cut(s)	764
BmsI	GCATC	1 cut(s)	212
BpmI	CTGGAG	1 cut(s)	6
Bpu1102I	GCTNAGC	2 cut(s)	323, 563
Bpu14I	TTCGAA	1 cut(s)	555
BpuEI	CTTGAG	1 cut(s)	298
BsaJI	CCNNGG	1 cut(s)	336
Bsc4I	CCNNNNNNNGG	1 cut(s)	802
Bse1I	ACTGG	5 cut(s)	23, 145, 196, 271, 637
BseBI	CCWGG	1 cut(s)	764
BseDI	CCNNGG	1 cut(s)	336
BseGI	GGATG	1 cut(s)	497
BseLI	CCNNNNNNNGG	1 cut(s)	802
BseMII	CTCAG	3 cut(s)	314, 762, 894
BseNI	ACTGG	5 cut(s)	23, 145, 196, 271, 637
BseRI	GAGGAG	1 cut(s)	965
BseXI	GCAGC	1 cut(s)	103
BshFI	GGCC	2 cut(s)	83, 774
BsiHKAI	GWGCWC	1 cut(s)	65
BslFI	GGGAC	1 cut(s)	85
BslI	CCNNNNNNNGG	1 cut(s)	802
BsmAI	GTCTC	4 cut(s)	24, 287, 760, 930
BsmFI	GGGAC	1 cut(s)	85
BsnI	GGCC	2 cut(s)	83, 774
Bsp119I	TTCGAA	1 cut(s)	555
Bsp1286I	GDGCHC	1 cut(s)	65
Bsp1407I	TGTACA	3 cut(s)	431, 494, 882
Bsp143I	GATC	1 cut(s)	918
Bsp1720I	GCTNAGC	2 cut(s)	323, 563
BspACI	CCGC	2 cut(s)	162, 863
BspANI	GGCC	2 cut(s)	83, 774
BspCNI	CTCAG	3 cut(s)	315, 761, 895
BspLI	GGNNCC	1 cut(s)	523
BspPI	GGATC	1 cut(s)	913
BspT104I	TTCGAA	1 cut(s)	555
BsrGI	TGTACA	3 cut(s)	431, 494, 882
BsrI	ACTGG	5 cut(s)	23, 145, 196, 271, 637
BssECI	CCNNGG	1 cut(s)	336
BssMI	GATC	1 cut(s)	918
Bst2UI	CCWGG	1 cut(s)	764
Bst4CI	ACNGT	3 cut(s)	436, 787, 887
BstAUI	TGTACA	3 cut(s)	431, 494, 882
BstBI	TTCGAA	1 cut(s)	555
BstDEI	CTNAG	5 cut(s)	323, 563, 748, 903, 1020
BstDSI	CCRYGG	1 cut(s)	336
BstF5I	GGATG	1 cut(s)	497
BstKTI	GATC	1 cut(s)	921
BstMAI	GTCTC	4 cut(s)	24, 287, 760, 930
BstMBI	GATC	1 cut(s)	918
BstMWI	GCNNNNNNNGC	4 cut(s)	69, 482, 741, 899
BstNI	CCWGG	1 cut(s)	764
BstNSI	RCATGY	1 cut(s)	215
BstSCI	CCNGG	1 cut(s)	762
BstV1I	GCAGC	1 cut(s)	103
BstX2I	RGATCY	1 cut(s)	918
BstYI	RGATCY	1 cut(s)	918
BsuRI	GGCC	2 cut(s)	83, 774
BtgI	CCRYGG	1 cut(s)	336
BtrI	CACGTC	1 cut(s)	445
BtsCI	GGATG	1 cut(s)	497
BtsI	GCAGTG	1 cut(s)	411
BtsIMutI	CAGTG	4 cut(s)	189, 264, 411, 441
CaiI	CAGNNNCTG	2 cut(s)	29, 440
Cfr13I	GGNCC	2 cut(s)	608, 955
CseI	GACGC	1 cut(s)	750
Csp6I	GTAC	6 cut(s)	432, 495, 652, 727, 883, 930
CviQI	GTAC	6 cut(s)	432, 495, 652, 727, 883, 930
DdeI	CTNAG	5 cut(s)	323, 563, 748, 903, 1020
DpnI	GATC	1 cut(s)	920
DpnII	GATC	1 cut(s)	918
DriI	GACNNNNNGTC	1 cut(s)	943
EaeI	YGGCCR	1 cut(s)	81
Eam1105I	GACNNNNNGTC	1 cut(s)	943
Ecl136II	GAGCTC	1 cut(s)	63
Eco24I	GRGCYC	1 cut(s)	65
Eco32I	GATATC	1 cut(s)	315
Eco47I	GGWCC	2 cut(s)	608, 955
Eco53kI	GAGCTC	1 cut(s)	63
EcoICRI	GAGCTC	1 cut(s)	63
EcoO109I	RGGNCCY	1 cut(s)	955
EcoRII	CCWGG	1 cut(s)	762
EcoRV	GATATC	1 cut(s)	315
EcoT22I	ATGCAT	1 cut(s)	347
EcoT38I	GRGCYC	1 cut(s)	65
FaqI	GGGAC	1 cut(s)	85
Fnu4HI	GCNGC	1 cut(s)	92
FokI	GGATG	1 cut(s)	484
FriOI	GRGCYC	1 cut(s)	65
Fsp4HI	GCNGC	1 cut(s)	92
FspBI	CTAG	2 cut(s)	701, 927
GluI	GCNGC	1 cut(s)	92
GsuI	CTGGAG	1 cut(s)	6
HaeIII	GGCC	2 cut(s)	83, 774
HgaI	GACGC	1 cut(s)	750
HinfI	GANTC	5 cut(s)	280, 331, 821, 988, 1016
Hpy166II	GTNNAC	2 cut(s)	495, 883
Hpy188I	TCNGA	5 cut(s)	31, 312, 649, 851, 949
Hpy188III	TCNNGA	2 cut(s)	391, 796
Hpy8I	GTNNAC	2 cut(s)	495, 883
HpyAV	CCTTC	2 cut(s)	605, 964
HpyCH4III	ACNGT	3 cut(s)	436, 787, 887
HpyCH4IV	ACGT	1 cut(s)	444
HpyCH4V	TGCA	5 cut(s)	203, 345, 671, 714, 735
HpyF10VI	GCNNNNNNNGC	4 cut(s)	69, 482, 741, 899
HpyF3I	CTNAG	5 cut(s)	323, 563, 748, 903, 1020
HpySE526I	ACGT	1 cut(s)	444
Kzo9I	GATC	1 cut(s)	918
LmnI	GCTCC	2 cut(s)	38, 701
Lsp1109I	GCAGC	1 cut(s)	103
LweI	GCATC	1 cut(s)	212
MaeI	CTAG	2 cut(s)	701, 927
MaeII	ACGT	1 cut(s)	444
MaeIII	GTNAC	3 cut(s)	157, 194, 436
MalI	GATC	1 cut(s)	920
MboI	GATC	1 cut(s)	918
MboII	GAAGA	2 cut(s)	544, 654
MflI	RGATCY	1 cut(s)	918
MhlI	GDGCHC	1 cut(s)	65
MlsI	TGGCCA	1 cut(s)	83
MluCI	AATT	2 cut(s)	510, 557
MluNI	TGGCCA	1 cut(s)	83
MlyI	GAGTC	3 cut(s)	289, 997, 1025
MmeI	TCCRAC	1 cut(s)	280
MnlI	CCTC	9 cut(s)	114, 379, 479, 740, 892, 932, 943, 946, 967
Mox20I	TGGCCA	1 cut(s)	83
Mph1103I	ATGCAT	1 cut(s)	347
MscI	TGGCCA	1 cut(s)	83
MseI	TTAA	1 cut(s)	453
MslI	CAYNNNNRTG	4 cut(s)	77, 269, 805, 878
Msp20I	TGGCCA	1 cut(s)	83
MspR9I	CCNGG	1 cut(s)	764
MvaI	CCWGG	1 cut(s)	764
MwoI	GCNNNNNNNGC	4 cut(s)	69, 482, 741, 899
NdeII	GATC	1 cut(s)	918
NlaIV	GGNNCC	1 cut(s)	523
NmuCI	GTSAC	1 cut(s)	436
NsiI	ATGCAT	1 cut(s)	347
NspI	RCATGY	1 cut(s)	215
NspV	TTCGAA	1 cut(s)	555
PfeI	GAWTC	2 cut(s)	331, 821
PkrI	GCNGC	1 cut(s)	93
PleI	GAGTC	3 cut(s)	288, 996, 1024
PpsI	GAGTC	3 cut(s)	288, 996, 1024
PpuMI	RGGWCCY	1 cut(s)	955
Psp124BI	GAGCTC	1 cut(s)	65
Psp5II	RGGWCCY	1 cut(s)	955
Psp6I	CCWGG	1 cut(s)	762
PspGI	CCWGG	1 cut(s)	762
PspN4I	GGNNCC	1 cut(s)	523
PspPI	GGNCC	2 cut(s)	608, 955
PspPPI	RGGWCCY	1 cut(s)	955
PstNI	CAGNNNCTG	2 cut(s)	29, 440
PsuI	RGATCY	1 cut(s)	918
RsaI	GTAC	6 cut(s)	433, 496, 653, 728, 884, 931
RsaNI	GTAC	6 cut(s)	432, 495, 652, 727, 883, 930
RseI	CAYNNNNRTG	4 cut(s)	77, 269, 805, 878
SacI	GAGCTC	1 cut(s)	65
SaqAI	TTAA	1 cut(s)	453
SatI	GCNGC	1 cut(s)	92
Sau3AI	GATC	1 cut(s)	918
Sau96I	GGNCC	2 cut(s)	608, 955
SchI	GAGTC	3 cut(s)	289, 997, 1025
ScrFI	CCNGG	1 cut(s)	764
SduI	GDGCHC	1 cut(s)	65
SfaNI	GCATC	1 cut(s)	212
SfuI	TTCGAA	1 cut(s)	555
SinI	GGWCC	2 cut(s)	608, 955
SmiMI	CAYNNNNRTG	4 cut(s)	77, 269, 805, 878
SmlI	CTYRAG	1 cut(s)	277
SmoI	CTYRAG	1 cut(s)	277
Sse9I	AATT	2 cut(s)	510, 557
SsiI	CCGC	2 cut(s)	162, 863
SspI	AATATT	1 cut(s)	55
SspMI	CTAG	2 cut(s)	701, 927
SstI	GAGCTC	1 cut(s)	65
StyD4I	CCNGG	1 cut(s)	762
TaaI	ACNGT	3 cut(s)	436, 787, 887
TaiI	ACGT	1 cut(s)	447
TaqI	TCGA	2 cut(s)	317, 555
TasI	AATT	2 cut(s)	510, 557
TatI	WGTACW	5 cut(s)	431, 494, 651, 882, 929
TfiI	GAWTC	2 cut(s)	331, 821
Tru1I	TTAA	1 cut(s)	453
Tru9I	TTAA	1 cut(s)	453
TscAI	CASTG	4 cut(s)	196, 271, 411, 441
TseFI	GTSAC	1 cut(s)	436
TseI	GCWGC	1 cut(s)	91
Tsp45I	GTSAC	1 cut(s)	436
TspDTI	ATGAA	5 cut(s)	65, 287, 353, 670, 794
TspRI	CASTG	4 cut(s)	196, 271, 411, 441
VpaK11BI	GGWCC	2 cut(s)	608, 955
XapI	RAATTY	1 cut(s)	510
XceI	RCATGY	1 cut(s)	215
XspI	CTAG	2 cut(s)	701, 927
Zsp2I	ATGCAT	1 cut(s)	347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.