AT3G27185

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
10035096 .. 10036359
1264 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G27185.1

Sequence Viewer

Length: 303 bp
ATGCTCGAAACTCGATTGTTCTCGAACCAGTCAATCATTCTACCGAGCTTTTCTTCACACAAGTCTATAGTCAAATCAGACAAATTCTGCAAAAAGCTTAACCTATGTCAAGAAGTGACGGCCCTTACTTCAGAATTCCACCTAGGAAACTGCGAGGCTTGGCGCGAGACTGTCACCAAGCTCAAGGATCCTGAGACAAAGAGATATTTCAAGCTGCAAAGAACTCTTGACAAAGGGTTTCAAGATGAAGAAGTGTTTAGCTGCAAAGAAGATCTGAAGACCATTCAAAGGTATGGTGATTGA
Functional Annotation

Protein Analysis

100

Amino Acids

11.73

Weight (kDa)

8.36

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 165
AclWI GGATC 2 cut(s) 182, 195
AcsI RAATTY 2 cut(s) 83, 134
AcuI CTGAAG 2 cut(s) 114, 296
AfiI CCNNNNNNNGG 1 cut(s) 288
AgsI TTSAA 3 cut(s) 211, 242, 287
AluBI AGCT 5 cut(s) 48, 97, 181, 214, 261
AluI AGCT 5 cut(s) 48, 97, 181, 214, 261
Alw26I GTCTC 2 cut(s) 161, 188
AlwI GGATC 2 cut(s) 182, 195
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 2 cut(s) 214, 261
ApoI RAATTY 2 cut(s) 83, 134
AspA2I CCTAGG 1 cut(s) 142
AspLEI GCGC 1 cut(s) 165
AspS9I GGNCC 1 cut(s) 121
AsuHPI GGTGA 1 cut(s) 166
AvrII CCTAGG 1 cut(s) 142
BamHI GGATCC 1 cut(s) 187
BbsI GAAGAC 1 cut(s) 284
BbvI GCAGC 2 cut(s) 201, 248
BceAI ACGGC 1 cut(s) 135
BcoDI GTCTC 2 cut(s) 161, 188
BfaI CTAG 1 cut(s) 143
BfmI CTRYAG 1 cut(s) 66
BglII AGATCT 1 cut(s) 271
BisI GCNGC 2 cut(s) 215, 262
BlnI CCTAGG 1 cut(s) 142
BlsI GCNGC 2 cut(s) 216, 263
BmgT120I GGNCC 1 cut(s) 121
BmiI GGNNCC 1 cut(s) 189
BpiI GAAGAC 1 cut(s) 284
BpuEI CTTGAG 1 cut(s) 167
BsaJI CCNNGG 1 cut(s) 142
Bsc4I CCNNNNNNNGG 1 cut(s) 288
Bse1I ACTGG 1 cut(s) 28
BseDI CCNNGG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 288
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 1 cut(s) 28
BseXI GCAGC 2 cut(s) 201, 248
Bsh1236I CGCG 1 cut(s) 165
BshFI GGCC 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 288
BsmAI GTCTC 2 cut(s) 161, 188
BsnI GGCC 1 cut(s) 122
Bsp143I GATC 2 cut(s) 187, 271
BspANI GGCC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 184
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 1 cut(s) 189
BspPI GGATC 2 cut(s) 182, 195
BsrI ACTGG 1 cut(s) 28
BssECI CCNNGG 1 cut(s) 142
BssMI GATC 2 cut(s) 187, 271
BssT1I CCWWGG 1 cut(s) 142
Bst4CI ACNGT 1 cut(s) 172
BstDEI CTNAG 1 cut(s) 192
BstFNI CGCG 1 cut(s) 165
BstHHI GCGC 1 cut(s) 165
BstKTI GATC 2 cut(s) 190, 274
BstMAI GTCTC 2 cut(s) 161, 188
BstMBI GATC 2 cut(s) 187, 271
BstSFI CTRYAG 1 cut(s) 66
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 2 cut(s) 201, 248
BstV2I GAAGAC 1 cut(s) 284
BstX2I RGATCY 2 cut(s) 187, 271
BstYI RGATCY 2 cut(s) 187, 271
BsuRI GGCC 1 cut(s) 122
CfoI GCGC 1 cut(s) 165
Cfr13I GGNCC 1 cut(s) 121
CviJI RGCY 7 cut(s) 48, 97, 122, 158, 181, 214, 261
CviKI_1 RGCY 7 cut(s) 48, 97, 122, 158, 181, 214, 261
DdeI CTNAG 1 cut(s) 192
DpnI GATC 2 cut(s) 189, 273
DpnII GATC 2 cut(s) 187, 271
Eco130I CCWWGG 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 114, 296
EcoRI GAATTC 1 cut(s) 134
EcoT14I CCWWGG 1 cut(s) 142
ErhI CCWWGG 1 cut(s) 142
FaiI YATR 3 cut(s) 68, 106, 294
Fnu4HI GCNGC 2 cut(s) 215, 262
Fsp4HI GCNGC 2 cut(s) 215, 262
FspBI CTAG 1 cut(s) 143
GlaI GCGC 1 cut(s) 164
GluI GCNGC 2 cut(s) 215, 262
HaeIII GGCC 1 cut(s) 122
HhaI GCGC 1 cut(s) 165
Hin6I GCGC 1 cut(s) 163
HinP1I GCGC 1 cut(s) 163
HindIII AAGCTT 1 cut(s) 95
HphI GGTGA 1 cut(s) 166
Hpy188I TCNGA 3 cut(s) 79, 133, 276
Hpy188III TCNNGA 5 cut(s) 22, 110, 191, 227, 242
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4V TGCA 3 cut(s) 90, 217, 264
HpyF3I CTNAG 1 cut(s) 192
HspAI GCGC 1 cut(s) 163
Kzo9I GATC 2 cut(s) 187, 271
LpnPI CCDG 2 cut(s) 41, 204
Lsp1109I GCAGC 2 cut(s) 201, 248
MaeI CTAG 1 cut(s) 143
MaeIII GTNAC 2 cut(s) 115, 172
MalI GATC 2 cut(s) 189, 273
MboI GATC 2 cut(s) 187, 271
MboII GAAGA 4 cut(s) 45, 260, 281, 289
MflI RGATCY 2 cut(s) 187, 271
MluCI AATT 2 cut(s) 83, 134
MnlI CCTC 1 cut(s) 148
MseI TTAA 1 cut(s) 99
MvnI CGCG 1 cut(s) 165
NdeII GATC 2 cut(s) 187, 271
NlaIV GGNNCC 1 cut(s) 189
NmuCI GTSAC 2 cut(s) 115, 172
PkrI GCNGC 2 cut(s) 216, 263
PspN4I GGNNCC 1 cut(s) 189
PspPI GGNCC 1 cut(s) 121
PsuI RGATCY 2 cut(s) 187, 271
SaqAI TTAA 1 cut(s) 99
SatI GCNGC 2 cut(s) 215, 262
Sau3AI GATC 2 cut(s) 187, 271
Sau96I GGNCC 1 cut(s) 121
SetI ASST 8 cut(s) 50, 99, 105, 144, 183, 216, 263, 293
SfcI CTRYAG 1 cut(s) 66
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
Sse9I AATT 2 cut(s) 83, 134
SspMI CTAG 1 cut(s) 143
StyI CCWWGG 1 cut(s) 142
TaaI ACNGT 1 cut(s) 172
TaqI TCGA 3 cut(s) 6, 13, 23
TasI AATT 2 cut(s) 83, 134
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TseFI GTSAC 2 cut(s) 115, 172
TseI GCWGC 2 cut(s) 214, 261
Tsp45I GTSAC 2 cut(s) 115, 172
TspDTI ATGAA 1 cut(s) 261
XapI RAATTY 2 cut(s) 83, 134
XmaJI CCTAGG 1 cut(s) 142
XspI CTAG 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.