eukaryotic translation initiation factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 910 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 1931, 4422, 4446 |
| Acc36I | ACCTGC | 4 cut(s) | 910, 1423, 2572, 4426 |
| Acc65I | GGTACC | 1 cut(s) | 1318 |
| AccB1I | GGYRCC | 4 cut(s) | 125, 1318, 1354, 2255 |
| AccBSI | CCGCTC | 3 cut(s) | 1349, 1829, 4459 |
| AccI | GTMKAC | 2 cut(s) | 398, 2024 |
| AccII | CGCG | 1 cut(s) | 4501 |
| AclI | AACGTT | 1 cut(s) | 5078 |
| AclWI | GGATC | 6 cut(s) | 54, 1588, 1934, 2910, 3749, 4773 |
| AcoI | YGGCCR | 1 cut(s) | 4383 |
| AcsI | RAATTY | 9 cut(s) | 1699, 1972, 3163, 3539, 4057, 4484, 4690, 5119, 5162 |
| AcuI | CTGAAG | 3 cut(s) | 2036, 3620, 4617 |
| AcvI | CACGTG | 1 cut(s) | 4043 |
| AcyI | GRCGYC | 3 cut(s) | 126, 428, 590 |
| AfaI | GTAC | 9 cut(s) | 612, 810, 1320, 1398, 1695, 2747, 2785, 3799, 4545 |
| AflIII | ACRYGT | 1 cut(s) | 1868 |
| AgeI | ACCGGT | 2 cut(s) | 65, 5142 |
| AjiI | CACGTC | 1 cut(s) | 1163 |
| AjnI | CCWGG | 6 cut(s) | 136, 2887, 3022, 4863, 4974, 4993 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 306, 338, 4702, 4734 |
| Alw21I | GWGCWC | 7 cut(s) | 1015, 1658, 2312, 2525, 2923, 3996, 5102 |
| Alw44I | GTGCAC | 1 cut(s) | 3992 |
| AlwI | GGATC | 6 cut(s) | 54, 1588, 1934, 2910, 3749, 4773 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 608, 2462, 2557, 5066 |
| Ama87I | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| AoxI | GGCC | 9 cut(s) | 821, 1033, 2501, 3971, 4205, 4313, 4356, 4383, 4553 |
| ApaLI | GTGCAC | 1 cut(s) | 3992 |
| ApoI | RAATTY | 9 cut(s) | 1699, 1972, 3163, 3539, 4057, 4484, 4690, 5119, 5162 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1580, 1612, 4178, 4210 |
| AsiGI | ACCGGT | 2 cut(s) | 65, 5142 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2410, 2445 |
| Asp718I | GGTACC | 1 cut(s) | 1318 |
| AspA2I | CCTAGG | 2 cut(s) | 4097, 4220 |
| AspLEI | GCGC | 3 cut(s) | 128, 134, 148 |
| AsuC2I | CCSGG | 5 cut(s) | 210, 318, 1310, 2752, 2753 |
| AsuII | TTCGAA | 1 cut(s) | 2546 |
| AsuNHI | GCTAGC | 1 cut(s) | 1744 |
| AvaI | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| AvrII | CCTAGG | 2 cut(s) | 4097, 4220 |
| AxyI | CCTNAGG | 3 cut(s) | 2505, 2574, 2796 |
| BaeGI | GKGCMC | 5 cut(s) | 562, 672, 1099, 3996, 4651 |
| BanI | GGYRCC | 4 cut(s) | 125, 1318, 1354, 2255 |
| BanII | GRGCYC | 5 cut(s) | 1058, 1658, 2312, 2525, 5102 |
| BauI | CACGAG | 2 cut(s) | 2398, 4793 |
| BbrPI | CACGTG | 1 cut(s) | 4043 |
| BbsI | GAAGAC | 4 cut(s) | 177, 2334, 2631, 3885 |
| Bbv12I | GWGCWC | 7 cut(s) | 1015, 1658, 2312, 2525, 2923, 3996, 5102 |
| BbvCI | CCTCAGC | 2 cut(s) | 526, 1148 |
| BceAI | ACGGC | 3 cut(s) | 603, 1209, 2919 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4479, 4513 |
| BciT130I | CCWGG | 6 cut(s) | 138, 2889, 3024, 4865, 4976, 4995 |
| BciVI | GTATCC | 2 cut(s) | 1074, 2590 |
| BclI | TGATCA | 1 cut(s) | 3915 |
| BcnI | CCSGG | 5 cut(s) | 210, 318, 1310, 2752, 2753 |
| BfmI | CTRYAG | 4 cut(s) | 2463, 2670, 4317, 4563 |
| BfoI | RGCGCY | 2 cut(s) | 129, 135 |
| BfuAI | ACCTGC | 4 cut(s) | 910, 1423, 2572, 4426 |
| BfuI | GTATCC | 2 cut(s) | 1074, 2590 |
| BlnI | CCTAGG | 2 cut(s) | 4097, 4220 |
| BmcAI | AGTACT | 2 cut(s) | 2747, 4545 |
| BmeT110I | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| BmgBI | CACGTC | 1 cut(s) | 1163 |
| BmrI | ACTGGG | 2 cut(s) | 1367, 2638 |
| BmtI | GCTAGC | 1 cut(s) | 1748 |
| BmuI | ACTGGG | 2 cut(s) | 1367, 2638 |
| BpiI | GAAGAC | 4 cut(s) | 177, 2334, 2631, 3885 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1835, 1867 |
| BpmI | CTGGAG | 7 cut(s) | 461, 471, 1710, 1785, 4110, 4886, 5088 |
| Bpu10I | CCTNAGC | 5 cut(s) | 526, 981, 1148, 1350, 5101 |
| Bpu14I | TTCGAA | 1 cut(s) | 2546 |
| BpuEI | CTTGAG | 6 cut(s) | 204, 291, 2249, 4008, 4146, 4437 |
| BpuMI | CCSGG | 5 cut(s) | 210, 318, 1310, 2752, 2753 |
| Bsa29I | ATCGAT | 2 cut(s) | 3816, 3927 |
| BsaAI | YACGTR | 1 cut(s) | 4043 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2877 |
| BsaHI | GRCGYC | 3 cut(s) | 126, 428, 590 |
| BsaI | GGTCTC | 2 cut(s) | 1392, 1939 |
| BsaWI | WCCGGW | 4 cut(s) | 65, 365, 2154, 5142 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5089, 5119 |
| Bse118I | RCCGGY | 7 cut(s) | 65, 110, 128, 4358, 4381, 4385, 5142 |
| Bse21I | CCTNAGG | 3 cut(s) | 2505, 2574, 2796 |
| Bse3DI | GCAATG | 2 cut(s) | 220, 1504 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2877 |
| BseBI | CCWGG | 6 cut(s) | 138, 2889, 3024, 4865, 4976, 4995 |
| BseCI | ATCGAT | 2 cut(s) | 3816, 3927 |
| BseJI | GATNNNNATC | 1 cut(s) | 2877 |
| BseMI | GCAATG | 2 cut(s) | 220, 1504 |
| BseRI | GAGGAG | 8 cut(s) | 240, 894, 3578, 3626, 4119, 4122, 4271, 4998 |
| BseSI | GKGCMC | 5 cut(s) | 562, 672, 1099, 3996, 4651 |
| BseX3I | CGGCCG | 1 cut(s) | 4383 |
| BseYI | CCCAGC | 5 cut(s) | 1068, 1559, 1662, 1984, 2939 |
| BsgI | GTGCAG | 4 cut(s) | 660, 791, 1440, 3990 |
| Bsh1236I | CGCG | 1 cut(s) | 4501 |
| Bsh1285I | CGRYCG | 2 cut(s) | 4382, 4386 |
| BshFI | GGCC | 9 cut(s) | 823, 1035, 2503, 3973, 4207, 4315, 4358, 4385, 4555 |
| BshNI | GGYRCC | 4 cut(s) | 125, 1318, 1354, 2255 |
| BshTI | ACCGGT | 2 cut(s) | 65, 5142 |
| BshVI | ATCGAT | 2 cut(s) | 3816, 3927 |
| BsiEI | CGRYCG | 2 cut(s) | 4382, 4386 |
| BsiHKAI | GWGCWC | 7 cut(s) | 1015, 1658, 2312, 2525, 2923, 3996, 5102 |
| BsiHKCI | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| BslFI | GGGAC | 9 cut(s) | 270, 689, 782, 948, 999, 2482, 2922, 3084, 3259 |
| BsmBI | CGTCTC | 2 cut(s) | 419, 447 |
| BsmFI | GGGAC | 9 cut(s) | 270, 689, 782, 948, 999, 2482, 2922, 3084, 3259 |
| BsmI | GAATGC | 3 cut(s) | 2692, 3657, 4119 |
| BsnI | GGCC | 9 cut(s) | 823, 1035, 2503, 3973, 4207, 4315, 4358, 4385, 4555 |
| Bso31I | GGTCTC | 2 cut(s) | 1392, 1939 |
| BsoBI | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| Bsp119I | TTCGAA | 1 cut(s) | 2546 |
| Bsp1407I | TGTACA | 1 cut(s) | 808 |
| Bsp19I | CCATGG | 1 cut(s) | 4150 |
| BspANI | GGCC | 9 cut(s) | 823, 1035, 2503, 3973, 4207, 4315, 4358, 4385, 4555 |
| BspDI | ATCGAT | 2 cut(s) | 3816, 3927 |
| BspFNI | CGCG | 1 cut(s) | 4501 |
| BspHI | TCATGA | 3 cut(s) | 405, 2536, 2863 |
| BspMAI | CTGCAG | 3 cut(s) | 2467, 2674, 4321 |
| BspMI | ACCTGC | 4 cut(s) | 910, 1423, 2572, 4426 |
| BspOI | GCTAGC | 1 cut(s) | 1748 |
| BspPI | GGATC | 6 cut(s) | 54, 1588, 1934, 2910, 3749, 4773 |
| BspQI | GCTCTTC | 4 cut(s) | 1137, 1663, 1819, 2796 |
| BspT104I | TTCGAA | 1 cut(s) | 2546 |
| BspT107I | GGYRCC | 4 cut(s) | 125, 1318, 1354, 2255 |
| BspTNI | GGTCTC | 2 cut(s) | 1392, 1939 |
| BsrBI | CCGCTC | 3 cut(s) | 1349, 1829, 4459 |
| BsrDI | GCAATG | 2 cut(s) | 220, 1504 |
| BsrFI | RCCGGY | 7 cut(s) | 65, 110, 128, 4358, 4381, 4385, 5142 |
| BsrGI | TGTACA | 1 cut(s) | 808 |
| BssAI | RCCGGY | 7 cut(s) | 65, 110, 128, 4358, 4381, 4385, 5142 |
| BssNI | GRCGYC | 3 cut(s) | 126, 428, 590 |
| BssSI | CACGAG | 2 cut(s) | 2398, 4793 |
| BssT1I | CCWWGG | 5 cut(s) | 1965, 4097, 4150, 4220, 4269 |
| Bst2BI | CACGAG | 2 cut(s) | 2398, 4793 |
| Bst2UI | CCWGG | 6 cut(s) | 138, 2889, 3024, 4865, 4976, 4995 |
| Bst6I | CTCTTC | 8 cut(s) | 1137, 1663, 1819, 2796, 2991, 3555, 3618, 3759 |
| BstACI | GRCGYC | 3 cut(s) | 126, 428, 590 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1499, 1958, 2462, 2918, 3214 |
| BstAUI | TGTACA | 1 cut(s) | 808 |
| BstBAI | YACGTR | 1 cut(s) | 4043 |
| BstBI | TTCGAA | 1 cut(s) | 2546 |
| BstDSI | CCRYGG | 1 cut(s) | 4150 |
| BstEII | GGTNACC | 2 cut(s) | 68, 1166 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 1029, 3027, 3111, 4101 |
| BstFNI | CGCG | 1 cut(s) | 4501 |
| BstH2I | RGCGCY | 2 cut(s) | 129, 135 |
| BstHHI | GCGC | 3 cut(s) | 128, 134, 148 |
| BstMCI | CGRYCG | 2 cut(s) | 4382, 4386 |
| BstNI | CCWGG | 6 cut(s) | 138, 2889, 3024, 4865, 4976, 4995 |
| BstNSI | RCATGY | 4 cut(s) | 763, 1647, 1872, 3726 |
| BstPI | GGTNACC | 2 cut(s) | 68, 1166 |
| BstSFI | CTRYAG | 4 cut(s) | 2463, 2670, 4317, 4563 |
| BstSLI | GKGCMC | 5 cut(s) | 562, 672, 1099, 3996, 4651 |
| BstUI | CGCG | 1 cut(s) | 4501 |
| BstV2I | GAAGAC | 4 cut(s) | 177, 2334, 2631, 3885 |
| BstX2I | RGATCY | 2 cut(s) | 3754, 4765 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 2628, 2915, 2947, 3845 |
| BstYI | RGATCY | 2 cut(s) | 3754, 4765 |
| BstZI | CGGCCG | 1 cut(s) | 4383 |
| Bsu15I | ATCGAT | 2 cut(s) | 3816, 3927 |
| Bsu36I | CCTNAGG | 3 cut(s) | 2505, 2574, 2796 |
| BsuI | GTATCC | 2 cut(s) | 1074, 2590 |
| BsuRI | GGCC | 9 cut(s) | 823, 1035, 2503, 3973, 4207, 4315, 4358, 4385, 4555 |
| BsuTUI | ATCGAT | 2 cut(s) | 3816, 3927 |
| BtgI | CCRYGG | 1 cut(s) | 4150 |
| BtgZI | GCGATG | 1 cut(s) | 5040 |
| BtrI | CACGTC | 1 cut(s) | 1163 |
| BtsIMutI | CAGTG | 4 cut(s) | 1554, 2213, 2613, 4651 |
| BveI | ACCTGC | 4 cut(s) | 910, 1423, 2572, 4426 |
| CaiI | CAGNNNCTG | 4 cut(s) | 608, 2462, 2557, 5066 |
| CciI | TCATGA | 3 cut(s) | 405, 2536, 2863 |
| CfoI | GCGC | 3 cut(s) | 128, 134, 148 |
| Cfr10I | RCCGGY | 7 cut(s) | 65, 110, 128, 4358, 4381, 4385, 5142 |
| Cfr9I | CCCGGG | 1 cut(s) | 2751 |
| ClaI | ATCGAT | 2 cut(s) | 3816, 3927 |
| CseI | GACGC | 3 cut(s) | 436, 464, 579 |
| CsiI | ACCWGGT | 1 cut(s) | 3022 |
| Csp6I | GTAC | 9 cut(s) | 611, 809, 1319, 1397, 1694, 2746, 2784, 3798, 4544 |
| CspAI | ACCGGT | 2 cut(s) | 65, 5142 |
| CviQI | GTAC | 9 cut(s) | 611, 809, 1319, 1397, 1694, 2746, 2784, 3798, 4544 |
| DinI | GGCGCC | 1 cut(s) | 127 |
| DraI | TTTAAA | 1 cut(s) | 1200 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 1931, 4422, 4446 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 1931, 4422, 4446 |
| EaeI | YGGCCR | 1 cut(s) | 4383 |
| EagI | CGGCCG | 1 cut(s) | 4383 |
| Eam1104I | CTCTTC | 8 cut(s) | 1137, 1663, 1819, 2796, 2991, 3555, 3618, 3759 |
| EarI | CTCTTC | 8 cut(s) | 1137, 1663, 1819, 2796, 2991, 3555, 3618, 3759 |
| EciI | GGCGGA | 3 cut(s) | 94, 1701, 1761 |
| Ecl136II | GAGCTC | 4 cut(s) | 1656, 2310, 2523, 5100 |
| EclXI | CGGCCG | 1 cut(s) | 4383 |
| Eco130I | CCWWGG | 5 cut(s) | 1965, 4097, 4150, 4220, 4269 |
| Eco147I | AGGCCT | 1 cut(s) | 4315 |
| Eco24I | GRGCYC | 5 cut(s) | 1058, 1658, 2312, 2525, 5102 |
| Eco31I | GGTCTC | 2 cut(s) | 1392, 1939 |
| Eco32I | GATATC | 2 cut(s) | 697, 1364 |
| Eco52I | CGGCCG | 1 cut(s) | 4383 |
| Eco53kI | GAGCTC | 4 cut(s) | 1656, 2310, 2523, 5100 |
| Eco57I | CTGAAG | 3 cut(s) | 2036, 3620, 4617 |
| Eco72I | CACGTG | 1 cut(s) | 4043 |
| Eco81I | CCTNAGG | 3 cut(s) | 2505, 2574, 2796 |
| Eco88I | CYCGRG | 6 cut(s) | 237, 2751, 3040, 3740, 4578, 4650 |
| Eco91I | GGTNACC | 2 cut(s) | 68, 1166 |
| EcoICRI | GAGCTC | 4 cut(s) | 1656, 2310, 2523, 5100 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 1029, 3027, 3111, 4101 |
| EcoO109I | RGGNCCY | 3 cut(s) | 796, 2501, 3104 |
| EcoO65I | GGTNACC | 2 cut(s) | 68, 1166 |
| EcoRI | GAATTC | 3 cut(s) | 3539, 4057, 4690 |
| EcoRII | CCWGG | 6 cut(s) | 136, 2887, 3022, 4863, 4974, 4993 |
| EcoRV | GATATC | 2 cut(s) | 697, 1364 |
| EcoT14I | CCWWGG | 5 cut(s) | 1965, 4097, 4150, 4220, 4269 |
| EcoT22I | ATGCAT | 4 cut(s) | 834, 957, 975, 3728 |
| EcoT38I | GRGCYC | 5 cut(s) | 1058, 1658, 2312, 2525, 5102 |
| EgeI | GGCGCC | 1 cut(s) | 127 |
| EheI | GGCGCC | 1 cut(s) | 127 |
| ErhI | CCWWGG | 5 cut(s) | 1965, 4097, 4150, 4220, 4269 |
| Esp3I | CGTCTC | 2 cut(s) | 419, 447 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 2395, 2427, 2430, 2462, 3488, 3520, 4272, 4304 |
| FaqI | GGGAC | 9 cut(s) | 270, 689, 782, 948, 999, 2482, 2922, 3084, 3259 |
| FauI | CCCGC | 3 cut(s) | 921, 1453, 4452 |
| FauNDI | CATATG | 2 cut(s) | 834, 4080 |
| FbaI | TGATCA | 1 cut(s) | 3915 |
| FblI | GTMKAC | 2 cut(s) | 398, 2024 |
| FriOI | GRGCYC | 5 cut(s) | 1058, 1658, 2312, 2525, 5102 |
| GlaI | GCGC | 3 cut(s) | 127, 133, 147 |
| GsaI | CCCAGC | 5 cut(s) | 1072, 1563, 1666, 1988, 2943 |
| GsuI | CTGGAG | 7 cut(s) | 461, 471, 1710, 1785, 4110, 4886, 5088 |
| HaeII | RGCGCY | 2 cut(s) | 129, 135 |
| HaeIII | GGCC | 9 cut(s) | 823, 1035, 2503, 3973, 4207, 4315, 4358, 4385, 4555 |
| HgaI | GACGC | 3 cut(s) | 436, 464, 579 |
| HhaI | GCGC | 3 cut(s) | 128, 134, 148 |
| Hin1I | GRCGYC | 3 cut(s) | 126, 428, 590 |
| Hin6I | GCGC | 3 cut(s) | 126, 132, 146 |
| HinP1I | GCGC | 3 cut(s) | 126, 132, 146 |
| HincII | GTYRAC | 4 cut(s) | 1612, 3306, 3352, 3702 |
| HindII | GTYRAC | 4 cut(s) | 1612, 3306, 3352, 3702 |
| HindIII | AAGCTT | 1 cut(s) | 1574 |
| HpaI | GTTAAC | 1 cut(s) | 1612 |
| Hpy99I | CGWCG | 1 cut(s) | 1164 |
| HpyCH4IV | ACGT | 9 cut(s) | 556, 1162, 1635, 2808, 2946, 3009, 3154, 4042, 5078 |
| HpySE526I | ACGT | 9 cut(s) | 556, 1162, 1635, 2808, 2946, 3009, 3154, 4042, 5078 |
| Hsp92I | GRCGYC | 3 cut(s) | 126, 428, 590 |
| HspAI | GCGC | 3 cut(s) | 126, 132, 146 |
| KasI | GGCGCC | 1 cut(s) | 125 |
| KpnI | GGTACC | 1 cut(s) | 1322 |
| KroI | GCCGGC | 1 cut(s) | 128 |
| KroNI | GCCGGC | 1 cut(s) | 130 |
| Ksp22I | TGATCA | 1 cut(s) | 3915 |
| KspAI | GTTAAC | 1 cut(s) | 1612 |
| LguI | GCTCTTC | 4 cut(s) | 1137, 1663, 1819, 2796 |
| MabI | ACCWGGT | 1 cut(s) | 3022 |
| MaeII | ACGT | 9 cut(s) | 556, 1162, 1635, 2808, 2946, 3009, 3154, 4042, 5078 |
| MbiI | CCGCTC | 3 cut(s) | 1349, 1829, 4459 |
| MfeI | CAATTG | 2 cut(s) | 650, 3249 |
| MflI | RGATCY | 2 cut(s) | 3754, 4765 |
| Mly113I | GGCGCC | 1 cut(s) | 126 |
| MlyI | GAGTC | 5 cut(s) | 31, 835, 1853, 1919, 2045 |
| MmeI | TCCRAC | 5 cut(s) | 365, 410, 2066, 3043, 3193 |
| Mph1103I | ATGCAT | 4 cut(s) | 834, 957, 975, 3728 |
| MreI | CGCCGGCG | 1 cut(s) | 128 |
| MroNI | GCCGGC | 1 cut(s) | 128 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2410, 2445 |
| MslI | CAYNNNNRTG | 6 cut(s) | 279, 816, 1041, 2868, 3203, 3999 |
| MspA1I | CMGCKG | 3 cut(s) | 1448, 1559, 4130 |
| MunI | CAATTG | 2 cut(s) | 650, 3249 |
| Mva1269I | GAATGC | 3 cut(s) | 2692, 3657, 4119 |
| MvaI | CCWGG | 6 cut(s) | 138, 2889, 3024, 4865, 4976, 4995 |
| MvnI | CGCG | 1 cut(s) | 4501 |
| NaeI | GCCGGC | 1 cut(s) | 130 |
| NarI | GGCGCC | 1 cut(s) | 126 |
| NciI | CCSGG | 5 cut(s) | 210, 318, 1310, 2752, 2753 |
| NcoI | CCATGG | 1 cut(s) | 4150 |
| NdeI | CATATG | 2 cut(s) | 834, 4080 |
| NgoMIV | GCCGGC | 1 cut(s) | 128 |
| NheI | GCTAGC | 1 cut(s) | 1744 |
| NmeAIII | GCCGAG | 1 cut(s) | 3250 |
| NmuCI | GTSAC | 8 cut(s) | 486, 847, 1166, 1596, 1623, 4515, 4930, 4945 |
| NsiI | ATGCAT | 4 cut(s) | 834, 957, 975, 3728 |
| NspI | RCATGY | 4 cut(s) | 763, 1647, 1872, 3726 |
| NspV | TTCGAA | 1 cut(s) | 2546 |
| PaeI | GCATGC | 2 cut(s) | 763, 3726 |
| PaeR7I | CTCGAG | 1 cut(s) | 4578 |
| PagI | TCATGA | 3 cut(s) | 405, 2536, 2863 |
| PaqCI | CACCTGC | 1 cut(s) | 910 |
| PceI | AGGCCT | 1 cut(s) | 4315 |
| PciI | ACATGT | 1 cut(s) | 1868 |
| PciSI | GCTCTTC | 4 cut(s) | 1137, 1663, 1819, 2796 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4818 |
| PctI | GAATGC | 3 cut(s) | 2692, 3657, 4119 |
| PdiI | GCCGGC | 1 cut(s) | 130 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2410, 2445 |
| PflFI | GACNNNGTC | 1 cut(s) | 3024 |
| PfoI | TCCNGGA | 2 cut(s) | 2887, 4974 |
| PinAI | ACCGGT | 2 cut(s) | 65, 5142 |
| PleI | GAGTC | 5 cut(s) | 31, 835, 1852, 1919, 2045 |
| PluTI | GGCGCC | 1 cut(s) | 129 |
| PmaCI | CACGTG | 1 cut(s) | 4043 |
| PmlI | CACGTG | 1 cut(s) | 4043 |
| PpsI | GAGTC | 5 cut(s) | 31, 835, 1852, 1919, 2045 |
| Ppu21I | YACGTR | 1 cut(s) | 4043 |
| PpuMI | RGGWCCY | 2 cut(s) | 796, 3104 |
| PscI | ACATGT | 1 cut(s) | 1868 |
| Psp124BI | GAGCTC | 4 cut(s) | 1658, 2312, 2525, 5102 |
| Psp1406I | AACGTT | 1 cut(s) | 5078 |
| Psp5II | RGGWCCY | 2 cut(s) | 796, 3104 |
| Psp6I | CCWGG | 6 cut(s) | 136, 2887, 3022, 4863, 4974, 4993 |
| PspCI | CACGTG | 1 cut(s) | 4043 |
| PspEI | GGTNACC | 2 cut(s) | 68, 1166 |
| PspFI | CCCAGC | 5 cut(s) | 1068, 1559, 1662, 1984, 2939 |
| PspGI | CCWGG | 6 cut(s) | 136, 2887, 3022, 4863, 4974, 4993 |
| PspPPI | RGGWCCY | 2 cut(s) | 796, 3104 |
| PstI | CTGCAG | 3 cut(s) | 2467, 2674, 4321 |
| PstNI | CAGNNNCTG | 4 cut(s) | 608, 2462, 2557, 5066 |
| PsuI | RGATCY | 2 cut(s) | 3754, 4765 |
| PsyI | GACNNNGTC | 1 cut(s) | 3024 |
| PvuII | CAGCTG | 2 cut(s) | 1559, 4130 |
| RsaI | GTAC | 9 cut(s) | 612, 810, 1320, 1398, 1695, 2747, 2785, 3799, 4545 |
| RsaNI | GTAC | 9 cut(s) | 611, 809, 1319, 1397, 1694, 2746, 2784, 3798, 4544 |
| RseI | CAYNNNNRTG | 6 cut(s) | 279, 816, 1041, 2868, 3203, 3999 |
| SacI | GAGCTC | 4 cut(s) | 1658, 2312, 2525, 5102 |
| SapI | GCTCTTC | 4 cut(s) | 1137, 1663, 1819, 2796 |
| ScaI | AGTACT | 2 cut(s) | 2747, 4545 |
| SchI | GAGTC | 5 cut(s) | 31, 835, 1853, 1919, 2045 |
| SexAI | ACCWGGT | 1 cut(s) | 3022 |
| SfcI | CTRYAG | 4 cut(s) | 2463, 2670, 4317, 4563 |
| SfoI | GGCGCC | 1 cut(s) | 127 |
| Sfr274I | CTCGAG | 1 cut(s) | 4578 |
| SfuI | TTCGAA | 1 cut(s) | 2546 |
| SgrAI | CRCCGGYG | 1 cut(s) | 128 |
| SlaI | CTCGAG | 1 cut(s) | 4578 |
| SmaI | CCCGGG | 1 cut(s) | 2753 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 279, 816, 1041, 2868, 3203, 3999 |
| SmlI | CTYRAG | 7 cut(s) | 219, 306, 2228, 4023, 4161, 4452, 4578 |
| SmoI | CTYRAG | 7 cut(s) | 219, 306, 2228, 4023, 4161, 4452, 4578 |
| SphI | GCATGC | 2 cut(s) | 763, 3726 |
| SseBI | AGGCCT | 1 cut(s) | 4315 |
| SspDI | GGCGCC | 1 cut(s) | 125 |
| SspI | AATATT | 4 cut(s) | 754, 3772, 4640, 4917 |
| SstI | GAGCTC | 4 cut(s) | 1658, 2312, 2525, 5102 |
| StuI | AGGCCT | 1 cut(s) | 4315 |
| StyI | CCWWGG | 5 cut(s) | 1965, 4097, 4150, 4220, 4269 |
| TaiI | ACGT | 9 cut(s) | 559, 1165, 1638, 2811, 2949, 3012, 3157, 4045, 5081 |
| TaqII | GACCGA | 1 cut(s) | 3103 |
| TatI | WGTACW | 5 cut(s) | 808, 1396, 2745, 2783, 4543 |
| TauI | GCSGC | 4 cut(s) | 110, 919, 4240, 5025 |
| TscAI | CASTG | 4 cut(s) | 1554, 2220, 2613, 4651 |
| TseFI | GTSAC | 8 cut(s) | 486, 847, 1166, 1596, 1623, 4515, 4930, 4945 |
| Tsp45I | GTSAC | 8 cut(s) | 486, 847, 1166, 1596, 1623, 4515, 4930, 4945 |
| TspGWI | ACGGA | 2 cut(s) | 2096, 4452 |
| TspMI | CCCGGG | 1 cut(s) | 2751 |
| TspRI | CASTG | 4 cut(s) | 1554, 2220, 2613, 4651 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3024 |
| VneI | GTGCAC | 1 cut(s) | 3992 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 1029, 3027, 3111, 4101 |
| XapI | RAATTY | 9 cut(s) | 1699, 1972, 3163, 3539, 4057, 4484, 4690, 5119, 5162 |
| XbaI | TCTAGA | 1 cut(s) | 3083 |
| XceI | RCATGY | 4 cut(s) | 763, 1647, 1872, 3726 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1076 |
| XhoI | CTCGAG | 1 cut(s) | 4578 |
| XmaI | CCCGGG | 1 cut(s) | 2751 |
| XmaJI | CCTAGG | 2 cut(s) | 4097, 4220 |
| XmiI | GTMKAC | 2 cut(s) | 398, 2024 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2410, 2445 |
| ZrmI | AGTACT | 2 cut(s) | 2747, 4545 |
| Zsp2I | ATGCAT | 4 cut(s) | 834, 957, 975, 3728 |