Rh5CG294600

eukaryotic translation initiation factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
32456345 .. 32456725
381 bp
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UTR
Exon/CDS
Intron
Rh5CG294600.1

Sequence Viewer

Length: 381 bp
ATGGATGCCTCTTCTAGCAGAAGTGGTAGCATGGGTAATAATAAAGTTGCTTCCTTAAAACCCAGTCGACCAGATCAGCCCTCTGTTCCTTTTCAATCTAGAGAATTTTCAGGCACTACTTCAGAGCATAAGGATATTGGTAATGGTAGTGATTCGCTTACAGTGTCATGTTCCAAGGATAAAACTCTTCCCAAACTGAGTATAACTAGGAGTACTATTTCAAAAGGGAAGAAGAAGAGAAAAGAAATTTCTTCTAAGGCTGATCCTGCTGGGGTAACGTCTGATCAATATGGGGCTTATAAGAACCCTGAAGACAAGAAAGATATAGCATCTTCTGAAAGCACTTCTACTAGCATAATGTCAGAAGCAGGAAGCTGCTGA

Protein Analysis

126

Amino Acids

13.3

Weight (kDa)

9.27

Isoelectric Point (pI)

57.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AccI GTMKAC 1 cut(s) 67
AclWI GGATC 1 cut(s) 257
AcsI RAATTY 2 cut(s) 104, 246
AcuI CTGAAG 2 cut(s) 105, 330
AfaI GTAC 1 cut(s) 214
AgsI TTSAA 2 cut(s) 95, 222
AluBI AGCT 1 cut(s) 375
AluI AGCT 1 cut(s) 375
AlwI GGATC 1 cut(s) 257
ApeKI GCWGC 1 cut(s) 375
ApoI RAATTY 2 cut(s) 104, 246
BbsI GAAGAC 1 cut(s) 318
BbvI GCAGC 1 cut(s) 362
BclI TGATCA 1 cut(s) 283
BfaI CTAG 4 cut(s) 15, 99, 207, 351
BisI GCNGC 1 cut(s) 376
BlsI GCNGC 1 cut(s) 377
BmcAI AGTACT 1 cut(s) 214
BmrI ACTGGG 1 cut(s) 57
BmsI GCATC 1 cut(s) 338
BmuI ACTGGG 1 cut(s) 57
BpiI GAAGAC 1 cut(s) 318
BsaJI CCNNGG 1 cut(s) 174
Bse1I ACTGG 1 cut(s) 63
BseDI CCNNGG 1 cut(s) 174
BseGI GGATG 1 cut(s) 10
BseMII CTCAG 1 cut(s) 188
BseNI ACTGG 1 cut(s) 63
BseXI GCAGC 1 cut(s) 362
BseYI CCCAGC 1 cut(s) 269
Bsp143I GATC 3 cut(s) 73, 262, 283
BspCNI CTCAG 1 cut(s) 189
BspPI GGATC 1 cut(s) 257
BsrI ACTGG 1 cut(s) 63
BssECI CCNNGG 1 cut(s) 174
BssMI GATC 3 cut(s) 73, 262, 283
BssT1I CCWWGG 1 cut(s) 174
Bst4CI ACNGT 1 cut(s) 163
Bst6I CTCTTC 3 cut(s) 16, 192, 230
BstDEI CTNAG 2 cut(s) 197, 255
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 3 cut(s) 76, 265, 286
BstMBI GATC 3 cut(s) 73, 262, 283
BstMWI GCNNNNNNNGC 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 362
BstV2I GAAGAC 1 cut(s) 318
BtsCI GGATG 1 cut(s) 10
BtsIMutI CAGTG 1 cut(s) 168
Csp6I GTAC 1 cut(s) 213
CviAII CATG 2 cut(s) 31, 168
CviJI RGCY 4 cut(s) 79, 260, 296, 375
CviKI_1 RGCY 4 cut(s) 79, 260, 296, 375
CviQI GTAC 1 cut(s) 213
DdeI CTNAG 2 cut(s) 197, 255
DpnI GATC 3 cut(s) 75, 264, 285
DpnII GATC 3 cut(s) 73, 262, 283
Eam1104I CTCTTC 3 cut(s) 16, 192, 230
EarI CTCTTC 3 cut(s) 16, 192, 230
Eco130I CCWWGG 1 cut(s) 174
Eco57I CTGAAG 2 cut(s) 105, 330
EcoT14I CCWWGG 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 174
FaeI CATG 2 cut(s) 34, 171
FaiI YATR 8 cut(s) 32, 129, 169, 203, 291, 300, 326, 356
FatI CATG 2 cut(s) 30, 167
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 67
Fnu4HI GCNGC 1 cut(s) 376
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 376
FspBI CTAG 4 cut(s) 15, 99, 207, 351
GluI GCNGC 1 cut(s) 376
GsaI CCCAGC 1 cut(s) 273
Hin1II CATG 2 cut(s) 34, 171
HincII GTYRAC 1 cut(s) 68
HindII GTYRAC 1 cut(s) 68
HinfI GANTC 1 cut(s) 152
Hpy166II GTNNAC 1 cut(s) 68
Hpy188I TCNGA 4 cut(s) 124, 283, 337, 364
Hpy188III TCNNGA 1 cut(s) 99
Hpy8I GTNNAC 1 cut(s) 68
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4IV ACGT 1 cut(s) 278
HpyF10VI GCNNNNNNNGC 1 cut(s) 266
HpyF3I CTNAG 2 cut(s) 197, 255
HpySE526I ACGT 1 cut(s) 278
Hsp92II CATG 2 cut(s) 34, 171
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 3 cut(s) 73, 262, 283
LpnPI CCDG 7 cut(s) 76, 84, 96, 255, 279, 321, 354
Lsp1109I GCAGC 1 cut(s) 362
LweI GCATC 1 cut(s) 338
MaeI CTAG 4 cut(s) 15, 99, 207, 351
MaeII ACGT 1 cut(s) 278
MaeIII GTNAC 1 cut(s) 274
MalI GATC 3 cut(s) 75, 264, 285
MboI GATC 3 cut(s) 73, 262, 283
MboII GAAGA 8 cut(s) 3, 179, 241, 243, 244, 247, 323, 324
MluCI AATT 2 cut(s) 104, 246
MnlI CCTC 2 cut(s) 19, 91
MseI TTAA 1 cut(s) 56
MwoI GCNNNNNNNGC 1 cut(s) 266
NdeII GATC 3 cut(s) 73, 262, 283
NlaIII CATG 2 cut(s) 34, 171
PfeI GAWTC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 377
PsiI TTATAA 1 cut(s) 300
PspFI CCCAGC 1 cut(s) 269
RsaI GTAC 1 cut(s) 214
RsaNI GTAC 1 cut(s) 213
SalI GTCGAC 1 cut(s) 66
SaqAI TTAA 1 cut(s) 56
SatI GCNGC 1 cut(s) 376
Sau3AI GATC 3 cut(s) 73, 262, 283
ScaI AGTACT 1 cut(s) 214
SetI ASST 2 cut(s) 281, 377
SfaNI GCATC 1 cut(s) 338
Sse9I AATT 2 cut(s) 104, 246
SspMI CTAG 4 cut(s) 15, 99, 207, 351
StyI CCWWGG 1 cut(s) 174
TaaI ACNGT 1 cut(s) 163
TaiI ACGT 1 cut(s) 281
TaqI TCGA 1 cut(s) 67
TasI AATT 2 cut(s) 104, 246
TatI WGTACW 1 cut(s) 212
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 1 cut(s) 56
Tru9I TTAA 1 cut(s) 56
TscAI CASTG 1 cut(s) 168
TseI GCWGC 1 cut(s) 375
TspRI CASTG 1 cut(s) 168
XapI RAATTY 2 cut(s) 104, 246
XbaI TCTAGA 1 cut(s) 98
XmiI GTMKAC 1 cut(s) 67
XspI CTAG 4 cut(s) 15, 99, 207, 351
ZrmI AGTACT 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.