Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000945

Physical Location & Seq

Genomic Coordinates Forward (+)

33740705 .. 33745902

Gene Structure 5198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG258600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGAGGGCAATCTATGGGAATGTAGTCACTGTAAATCCTTTGGATCCTGGTAGTGCTTCTACACATCAAAATGTCGCCCATGCACAGTTGCAATTTCATGGCCCAGGGGATGCGTCCAAGGGATTTTCCTTTCAGTTTGGGTTCACAAGTCCTGGTTTGATGAATGGGATGCAGATTCCTGCTCGAGCTAGCTCAGTTCCCCCAACTTTTTATGAGCAGAAACACGATCAGGCACGGCTTGAGTCCTTTAGACCTGCACCGTCATTGCCAACCGCTGCAGTTCCTAAGCAGCTACCGAGGAAAGATCAACCTTCTGTCGACCAATCTAGTGCTGCTAAGGCTCATCTGCAACCCAAGGCCAAAAAGGATGTGCAAGTCTCACCTACAACGACTGCTAGCCAAAGTCAGAAACCTTCTGGTCCTCCAATGCATGGGATCCTTATGACGTCAATGCCATTTCATCAGCCACAGGTAGCACTTGAGTACAGTTTCAGGTTTACAACCCCATCCCATGCAGCTTCCTGGAGTTATGCATCAAAAAGTGAACCTGAGTTTTTCCCCCCAAACGGGTCCTCAGCTCCCTCAGTTGGGCAACTTGGGGATCAGCATAGCTGCACAATAACGCCAACAGCAAGCAAAAGTATCCGCAGTTCTTTATCCTGTAGTCAGTCAACTGCAGAAAGAAACCAGGAAAGGAAGGGAGTATTCAACCACAGCATCAGGTTGCTGGGCAATCTAGTACTACACCAAGCTTTCCTTCTCAGACTTCAGAACATGAATTGGCCAGGGAATCACTCTCAAATGTTAGCACGGCCACTATTGTTTCTGACTCGAAGGCTGAAACAGTTTGAGAAGGTGCCATCTCCTTCTGAATTACTTGGTGTTGGGATTGATGTCAATACTTTTGCTGTTGTTCATCATAGTCAACTAGGCAATTTTCGCTGCTGCATGAACAAGGAAAGCATGAATTGTCTGGAATCTGTTGACAAAGCAGCAGAGCAGTCTGTGGCAAAGGAAACCACTAAAGGCAATGTTATTGCAACTTCTGAAACTGCACAAGGAGGCAAAGATCAACATATCAGGTGCAATACAGAATTAGATGGGAGGATGCCTCTCCTAGCAGAAGTGTTAGCATGGAAGCAGGAAGCTGCTGATTCTACTCATCAAGTTGCTGCTGATTCTGCTCAGCAAGTTGCTGCAGTCAGAGATGAAGTAATTAAAGAATTTTACAGGTCAACGTCAGAGATATTTTCAGTAACGCTGGGCATAACATCGATGTTTTTTAACATAATGCCTGGCCCTCCTGGAGTCTCCTCTTCAACTGATGCTAATGCATCTCATGTACGTCTTTACAGGCTACAGCACGGAATGACAAATGCAATTATTCAGGACGTTAGTTTCAGTGACGACAGCAACTGGATCTTAGTGTTACAACTAGATCGGCAGTTTGTTGGCCACCTAATTCAAGTTCACAAATGCCTAATCAGCAGAGCCGTGTTCATCTGGTCCCCCAGTTACACTTCCTGTTTGACTATCTCTGGACTCAGTGTTCCAACAAAGAAGGGTTGCTGCTATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

526

Amino Acids

57.49

Weight (kDa)

8.83

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60240 AT3G60240 AT3G60240
fragaria_vesca	FvH4_7g08960 FvH4_7g08960 FvH4_7g08960 FvH4_7g08960
malus_domestica	MD02G1222000.v1.1 MD07G1093700.v1.1 MD07G1093900.v1.1 MD07G1094000.v1.1 MD07G1094100.v1.1 MD07G1094200.v1.1 MD07G1094300.v1.1 MD07G1094400.v1.1
prunus_persica	Prupe.2G118700_v2.0.a1
pyrus_communis	pycom02g18790 pycom07g07670 pycom07g07680 pycom07g07690 pycom07g07730 pycom07g07740 pycom07g07750 pycom07g07760 pycom07g07770 pycom07g07780 pycom12419g00310 pycom15g30700
rosa_chinensis	RchiOBHm_Chr1g0344441 RchiOBHm_Chr1g0344451 RchiOBHm_Chr5g0038171
rosa_laevigata	RLG00000028873 RLG00000028874 RLG00000028899 RLG00000033837
rosa_multiflora	Rmu_sc0002670.1_g000001 Rmu_sc0010876.1_g000002 Rmu_sc0015248.1_g000009 Rmu_sc0015248.1_g000010
rosa_roxburghii	Rroxscaffold_1G00042800 Rroxscaffold_1G00042810 Rroxscaffold_4G00309730
rosa_rugosa	Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug05G0171200 Rorug05G0171300 Rorug05G0171300
rosa_samantha	Rh1AG190800 Rh1BG157200 Rh1BG157300 Rh1CG176100 Rh1DG188400 Rh1DG188600 Rh5AG258600 Rh5BG262200 Rh5CG294400 Rh5CG294500 Rh5CG294600 Rh5CG294700 Rh5DG271300 Rh6AG374400
rosa_wichuraiana	Rw1G015670 Rw5G024210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	449
Acc36I	ACCTGC	1 cut(s)	262
AccB1I	GGYRCC	1 cut(s)	856
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccI	GTMKAC	1 cut(s)	318
AciI	CCGC	2 cut(s)	273, 646
AclWI	GGATC	6 cut(s)	38, 51, 430, 443, 609, 1427
AcoI	YGGCCR	3 cut(s)	782, 812, 1453
AcsI	RAATTY	1 cut(s)	1223
AcuI	CTGAAG	1 cut(s)	752
AcyI	GRCGYC	1 cut(s)	446
AfaI	GTAC	3 cut(s)	485, 741, 1344
AfiI	CCNNNNNNNGG	5 cut(s)	431, 566, 567, 587, 588
AgsI	TTSAA	3 cut(s)	709, 1320, 1466
AjnI	CCWGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	741, 773
AloI	GAACNNNNNNTCC	2 cut(s)	1533, 1565
AluBI	AGCT	8 cut(s)	188, 192, 292, 518, 578, 612, 752, 1148
AluI	AGCT	8 cut(s)	188, 192, 292, 518, 578, 612, 752, 1148
Alw26I	GTCTC	2 cut(s)	382, 1315
AlwI	GGATC	6 cut(s)	38, 51, 430, 443, 609, 1427
AlwNI	CAGNNNCTG	1 cut(s)	1416
Ama87I	CYCGRG	1 cut(s)	183
AoxI	GGCC	6 cut(s)	100, 357, 782, 812, 1297, 1453
ApoI	RAATTY	1 cut(s)	1223
AspS9I	GGNCC	5 cut(s)	101, 419, 570, 1298, 1506
AsuHPI	GGTGA	1 cut(s)	372
AsuNHI	GCTAGC	2 cut(s)	188, 395
AvaI	CYCGRG	1 cut(s)	183
AvaII	GGWCC	3 cut(s)	419, 570, 1506
BalI	TGGCCA	2 cut(s)	784, 1455
BamHI	GGATCC	2 cut(s)	43, 435
BanI	GGYRCC	1 cut(s)	856
BbvCI	CCTCAGC	1 cut(s)	574
BccI	CCATC	3 cut(s)	514, 868, 1094
BceAI	ACGGC	3 cut(s)	251, 827, 1478
BciT130I	CCWGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
BciVI	GTATCC	1 cut(s)	653
BcoDI	GTCTC	2 cut(s)	382, 1315
BfaI	CTAG	7 cut(s)	189, 327, 396, 737, 929, 1118, 1436
BfmI	CTRYAG	5 cut(s)	276, 661, 675, 1197, 1358
BfuAI	ACCTGC	1 cut(s)	262
BfuI	GTATCC	1 cut(s)	653
BlpI	GCTNAGC	1 cut(s)	1185
BmcAI	AGTACT	1 cut(s)	741
Bme1390I	CCNGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
Bme18I	GGWCC	3 cut(s)	419, 570, 1506
BmeT110I	CYCGRG	1 cut(s)	183
BmgT120I	GGNCC	5 cut(s)	101, 419, 570, 1298, 1506
BmiI	GGNNCC	5 cut(s)	45, 437, 571, 858, 1508
BmrFI	CCNGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
BmrI	ACTGGG	1 cut(s)	1506
BmsI	GCATC	7 cut(s)	100, 159, 542, 726, 1098, 1315, 1343
BmtI	GCTAGC	2 cut(s)	192, 399
BmuI	ACTGGG	1 cut(s)	1506
BplI	GAGNNNNNCTC	2 cut(s)	1096, 1128
BpmI	CTGGAG	2 cut(s)	544, 1326
Bpu10I	CCTNAGC	3 cut(s)	285, 336, 574
Bpu1102I	GCTNAGC	1 cut(s)	1185
BpuEI	CTTGAG	2 cut(s)	260, 500
Bsa29I	ATCGAT	1 cut(s)	1274
BsaHI	GRCGYC	1 cut(s)	446
BsaJI	CCNNGG	6 cut(s)	103, 104, 117, 296, 354, 785
Bsc4I	CCNNNNNNNGG	5 cut(s)	431, 566, 567, 587, 588
Bse1I	ACTGG	2 cut(s)	1421, 1512
Bse3DI	GCAATG	2 cut(s)	263, 1036
BseBI	CCWGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
BseCI	ATCGAT	1 cut(s)	1274
BseDI	CCNNGG	6 cut(s)	103, 104, 117, 296, 354, 785
BseGI	GGATG	5 cut(s)	115, 174, 373, 506, 1113
BseLI	CCNNNNNNNGG	5 cut(s)	431, 566, 567, 587, 588
BseMI	GCAATG	2 cut(s)	263, 1036
BseMII	CTCAG	7 cut(s)	207, 540, 588, 597, 775, 1199, 1558
BseNI	ACTGG	2 cut(s)	1421, 1512
BseRI	GAGGAG	1 cut(s)	1303
BseYI	CCCAGC	2 cut(s)	727, 1261
BsgI	GTGCAG	3 cut(s)	240, 598, 1038
BshFI	GGCC	6 cut(s)	102, 359, 784, 814, 1299, 1455
BshNI	GGYRCC	1 cut(s)	856
BshVI	ATCGAT	1 cut(s)	1274
BsiHKCI	CYCGRG	1 cut(s)	183
BslFI	GGGAC	1 cut(s)	1492
BslI	CCNNNNNNNGG	5 cut(s)	431, 566, 567, 587, 588
BsmAI	GTCTC	2 cut(s)	382, 1315
BsmFI	GGGAC	1 cut(s)	1492
BsnI	GGCC	6 cut(s)	102, 359, 784, 814, 1299, 1455
BsoBI	CYCGRG	1 cut(s)	183
Bsp143I	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
Bsp1720I	GCTNAGC	1 cut(s)	1185
BspACI	CCGC	2 cut(s)	273, 646
BspANI	GGCC	6 cut(s)	102, 359, 784, 814, 1299, 1455
BspCNI	CTCAG	7 cut(s)	206, 541, 587, 596, 774, 1198, 1557
BspDI	ATCGAT	1 cut(s)	1274
BspLI	GGNNCC	5 cut(s)	45, 437, 571, 858, 1508
BspMAI	CTGCAG	3 cut(s)	280, 679, 1201
BspMI	ACCTGC	1 cut(s)	262
BspOI	GCTAGC	2 cut(s)	192, 399
BspPI	GGATC	6 cut(s)	38, 51, 430, 443, 609, 1427
BspT107I	GGYRCC	1 cut(s)	856
BsrDI	GCAATG	2 cut(s)	263, 1036
BsrI	ACTGG	2 cut(s)	1421, 1512
BssECI	CCNNGG	6 cut(s)	103, 104, 117, 296, 354, 785
BssMI	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
BssNI	GRCGYC	1 cut(s)	446
BssT1I	CCWWGG	2 cut(s)	117, 354
Bst2UI	CCWGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
Bst4CI	ACNGT	5 cut(s)	31, 87, 261, 488, 846
Bst6I	CTCTTC	1 cut(s)	1321
BstACI	GRCGYC	1 cut(s)	446
BstC8I	GCNNGC	3 cut(s)	190, 397, 634
BstF5I	GGATG	5 cut(s)	115, 174, 373, 506, 1113
BstKTI	GATC	8 cut(s)	46, 229, 307, 438, 604, 1072, 1422, 1441
BstMAI	GTCTC	2 cut(s)	382, 1315
BstMBI	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
BstMWI	GCNNNNNNNGC	4 cut(s)	338, 939, 1181, 1485
BstNI	CCWGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
BstSCI	CCNGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
BstSFI	CTRYAG	5 cut(s)	276, 661, 675, 1197, 1358
BstX2I	RGATCY	3 cut(s)	43, 435, 1419
BstYI	RGATCY	3 cut(s)	43, 435, 1419
Bsu15I	ATCGAT	1 cut(s)	1274
BsuI	GTATCC	1 cut(s)	653
BsuRI	GGCC	6 cut(s)	102, 359, 784, 814, 1299, 1455
BsuTUI	ATCGAT	1 cut(s)	1274
BtsCI	GGATG	5 cut(s)	115, 174, 373, 506, 1113
BtsIMutI	CAGTG	3 cut(s)	27, 1408, 1552
BveI	ACCTGC	1 cut(s)	262
Cac8I	GCNNGC	3 cut(s)	190, 397, 634
CaiI	CAGNNNCTG	1 cut(s)	1416
Cfr13I	GGNCC	5 cut(s)	101, 419, 570, 1298, 1506
ClaI	ATCGAT	1 cut(s)	1274
CseI	GACGC	1 cut(s)	102
Csp6I	GTAC	3 cut(s)	484, 740, 1343
CviAII	CATG	9 cut(s)	80, 98, 431, 512, 775, 949, 964, 1134, 1340
CviQI	GTAC	3 cut(s)	484, 740, 1343
DpnI	GATC	8 cut(s)	45, 228, 306, 437, 603, 1071, 1421, 1440
DpnII	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
EaeI	YGGCCR	3 cut(s)	782, 812, 1453
Eam1104I	CTCTTC	1 cut(s)	1321
EarI	CTCTTC	1 cut(s)	1321
Eco130I	CCWWGG	2 cut(s)	117, 354
Eco47I	GGWCC	3 cut(s)	419, 570, 1506
Eco57I	CTGAAG	1 cut(s)	752
Eco88I	CYCGRG	1 cut(s)	183
EcoO109I	RGGNCCY	1 cut(s)	570
EcoRII	CCWGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
EcoT14I	CCWWGG	2 cut(s)	117, 354
EcoT22I	ATGCAT	3 cut(s)	432, 535, 1336
ErhI	CCWWGG	2 cut(s)	117, 354
FaeI	CATG	9 cut(s)	83, 101, 434, 515, 778, 952, 967, 1137, 1343
FalI	AAGNNNNNCTT	2 cut(s)	741, 773
FaqI	GGGAC	1 cut(s)	1492
FatI	CATG	9 cut(s)	79, 97, 430, 511, 774, 948, 963, 1133, 1339
FblI	GTMKAC	1 cut(s)	318
FokI	GGATG	5 cut(s)	122, 181, 380, 493, 1120
FspBI	CTAG	7 cut(s)	189, 327, 396, 737, 929, 1118, 1436
GsaI	CCCAGC	2 cut(s)	731, 1265
GsuI	CTGGAG	2 cut(s)	544, 1326
HaeIII	GGCC	6 cut(s)	102, 359, 784, 814, 1299, 1455
HgaI	GACGC	1 cut(s)	102
Hin1I	GRCGYC	1 cut(s)	446
Hin1II	CATG	9 cut(s)	83, 101, 434, 515, 778, 952, 967, 1137, 1343
HincII	GTYRAC	5 cut(s)	319, 672, 926, 985, 1236
HindII	GTYRAC	5 cut(s)	319, 672, 926, 985, 1236
HindIII	AAGCTT	1 cut(s)	750
HinfI	GANTC	9 cut(s)	175, 242, 790, 829, 977, 1154, 1178, 1308, 1542
HphI	GGTGA	1 cut(s)	372
Hpy166II	GTNNAC	9 cut(s)	144, 319, 498, 545, 672, 926, 985, 1236, 1471
Hpy188I	TCNGA	8 cut(s)	408, 764, 771, 828, 871, 1048, 1205, 1243
Hpy188III	TCNNGA	3 cut(s)	974, 1388, 1539
Hpy8I	GTNNAC	9 cut(s)	144, 319, 498, 545, 672, 926, 985, 1236, 1471
HpyAV	CCTTC	8 cut(s)	321, 423, 691, 767, 828, 847, 876, 1555
HpyCH4III	ACNGT	5 cut(s)	31, 87, 261, 488, 846
HpyCH4IV	ACGT	4 cut(s)	446, 1238, 1345, 1392
HpyF10VI	GCNNNNNNNGC	4 cut(s)	338, 939, 1181, 1485
HpySE526I	ACGT	4 cut(s)	446, 1238, 1345, 1392
Hsp92I	GRCGYC	1 cut(s)	446
Hsp92II	CATG	9 cut(s)	83, 101, 434, 515, 778, 952, 967, 1137, 1343
Kzo9I	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
LmnI	GCTCC	1 cut(s)	583
LweI	GCATC	7 cut(s)	100, 159, 542, 726, 1098, 1315, 1343
MaeI	CTAG	7 cut(s)	189, 327, 396, 737, 929, 1118, 1436
MaeII	ACGT	4 cut(s)	446, 1238, 1345, 1392
MaeIII	GTNAC	5 cut(s)	25, 1255, 1403, 1428, 1514
MalI	GATC	8 cut(s)	45, 228, 306, 437, 603, 1071, 1421, 1440
MboI	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
MboII	GAAGA	1 cut(s)	1308
MflI	RGATCY	3 cut(s)	43, 435, 1419
MlsI	TGGCCA	2 cut(s)	784, 1455
MluNI	TGGCCA	2 cut(s)	784, 1455
MlyI	GAGTC	4 cut(s)	251, 823, 1317, 1536
MmeI	TCCRAC	1 cut(s)	1577
MnlI	CCTC	9 cut(s)	291, 432, 583, 592, 1055, 1098, 1122, 1311, 1324
Mox20I	TGGCCA	2 cut(s)	784, 1455
Mph1103I	ATGCAT	3 cut(s)	432, 535, 1336
MscI	TGGCCA	2 cut(s)	784, 1455
MseI	TTAA	2 cut(s)	1218, 1284
MslI	CAYNNNNRTG	1 cut(s)	69
Msp20I	TGGCCA	2 cut(s)	784, 1455
MspA1I	CMGCKG	1 cut(s)	275
MspR9I	CCNGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
MvaI	CCWGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
MwoI	GCNNNNNNNGC	4 cut(s)	338, 939, 1181, 1485
NdeII	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
NheI	GCTAGC	2 cut(s)	188, 395
NlaIII	CATG	9 cut(s)	83, 101, 434, 515, 778, 952, 967, 1137, 1343
NlaIV	GGNNCC	5 cut(s)	45, 437, 571, 858, 1508
NmuCI	GTSAC	2 cut(s)	25, 1403
NsiI	ATGCAT	3 cut(s)	432, 535, 1336
PaeR7I	CTCGAG	1 cut(s)	183
PasI	CCCWGGG	1 cut(s)	104
PfeI	GAWTC	5 cut(s)	175, 790, 977, 1154, 1178
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	2 cut(s)	521, 1303
PleI	GAGTC	4 cut(s)	250, 823, 1316, 1536
PpsI	GAGTC	4 cut(s)	250, 823, 1316, 1536
PpuMI	RGGWCCY	1 cut(s)	570
Psp5II	RGGWCCY	1 cut(s)	570
Psp6I	CCWGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
PspFI	CCCAGC	2 cut(s)	727, 1261
PspGI	CCWGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
PspN4I	GGNNCC	5 cut(s)	45, 437, 571, 858, 1508
PspPI	GGNCC	5 cut(s)	101, 419, 570, 1298, 1506
PspPPI	RGGWCCY	1 cut(s)	570
PspXI	VCTCGAGB	1 cut(s)	183
PsrI	GAACNNNNNNTAC	2 cut(s)	634, 666
PstI	CTGCAG	3 cut(s)	280, 679, 1201
PstNI	CAGNNNCTG	1 cut(s)	1416
PsuI	RGATCY	3 cut(s)	43, 435, 1419
RsaI	GTAC	3 cut(s)	485, 741, 1344
RsaNI	GTAC	3 cut(s)	484, 740, 1343
RseI	CAYNNNNRTG	1 cut(s)	69
SalI	GTCGAC	1 cut(s)	317
SaqAI	TTAA	2 cut(s)	1218, 1284
Sau3AI	GATC	8 cut(s)	43, 226, 304, 435, 601, 1069, 1419, 1438
Sau96I	GGNCC	5 cut(s)	101, 419, 570, 1298, 1506
ScaI	AGTACT	1 cut(s)	741
SchI	GAGTC	4 cut(s)	251, 823, 1317, 1536
ScrFI	CCNGG	8 cut(s)	48, 105, 153, 523, 689, 786, 1296, 1305
SfaNI	GCATC	7 cut(s)	100, 159, 542, 726, 1098, 1315, 1343
SfcI	CTRYAG	5 cut(s)	276, 661, 675, 1197, 1358
Sfr274I	CTCGAG	1 cut(s)	183
SinI	GGWCC	3 cut(s)	419, 570, 1506
SlaI	CTCGAG	1 cut(s)	183
SmiMI	CAYNNNNRTG	1 cut(s)	69
SmlI	CTYRAG	3 cut(s)	183, 239, 479
SmoI	CTYRAG	3 cut(s)	183, 239, 479
SsiI	CCGC	2 cut(s)	273, 646
SspMI	CTAG	7 cut(s)	189, 327, 396, 737, 929, 1118, 1436
StyD4I	CCNGG	8 cut(s)	46, 103, 151, 521, 687, 784, 1294, 1303
StyI	CCWWGG	2 cut(s)	117, 354
TaaI	ACNGT	5 cut(s)	31, 87, 261, 488, 846
TaiI	ACGT	4 cut(s)	449, 1241, 1348, 1395
TaqI	TCGA	4 cut(s)	184, 318, 832, 1274
TatI	WGTACW	2 cut(s)	483, 739
TfiI	GAWTC	5 cut(s)	175, 790, 977, 1154, 1178
Tru1I	TTAA	2 cut(s)	1218, 1284
Tru9I	TTAA	2 cut(s)	1218, 1284
TscAI	CASTG	3 cut(s)	34, 1408, 1552
TseFI	GTSAC	2 cut(s)	25, 1403
Tsp45I	GTSAC	2 cut(s)	25, 1403
TspDTI	ATGAA	9 cut(s)	86, 176, 449, 791, 905, 965, 980, 1224, 1489
TspGWI	ACGGA	1 cut(s)	1380
TspRI	CASTG	3 cut(s)	34, 1408, 1552
Van91I	CCANNNNNTGG	1 cut(s)	431
VpaK11BI	GGWCC	3 cut(s)	419, 570, 1506
XapI	RAATTY	1 cut(s)	1223
XhoI	CTCGAG	1 cut(s)	183
XmiI	GTMKAC	1 cut(s)	318
XspI	CTAG	7 cut(s)	189, 327, 396, 737, 929, 1118, 1436
ZraI	GACGTC	1 cut(s)	447
ZrmI	AGTACT	1 cut(s)	741
Zsp2I	ATGCAT	3 cut(s)	432, 535, 1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.