RchiOBHm_Chr1g0344441

eukaryotic translation initiation factor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
36824199 .. 36830297
6099 bp
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UTR
Exon/CDS
Intron
PRQ57089

Sequence Viewer

Length: 4512 bp
ATGTCCTTCAATCAATCAAGGTCGGATAAGAACGAGACGCAGTATCGTAGAACAGGGCGATCCGCGAGCTCCAATCAGCAGAACAGGGGATACTCACCCGCTTACCCTAAGGGCGCCGGTGCCGCTGGGCCCGCCCCTTCCATCTCCTCCAACCGCAGCTTCAAGAAGTCTAACAACAATGCACAAGGAGGGCAACCTAGGGGGAATGTAGCCACTGTAAATCCCTCGGATCCTGGAAGTGCTTCTGCACCGCGTGGTGGCGTACCGAATGGCGCCCATGTACAGCCGCAATTTCACGGAGCCTCGGAGACAACTGTTACAGGCACAGCTCCCAAGCAAACAGAACCATCAGTTGCACAGAGAAGCTCTCGAGCTGTTCCGAAGGCTCCAGCTTCTCAGTCTGCCTCGGTGAATTCTGACTCAAGAGGGCCCAATACTCCTGTGAAGGTCCCAGGAGATGCGTCTAAGGGATTTTCCTTTCAGTTCGGGTCCATAAGTCCTGGTTTGATGAATGGGATGCAGATTCCTGCTCGAACCAGCTCGGCTCCCCCAAATTTGGATGAGCAGAAGCGCGATCAGGCACGGCATGAGTCCTTTAGACCTGCACCGTCATTGCCGACCCCTTCTGTTCCTAAGCAGCAGCTACCAAGGAAAGATCAACCTTCTGTCGACCAATCTAGTGCTGCTGAGGCTCATCTGCAACCCAAGGCCAAAAAGGAAGTGCAAGTCTCACCTACACCCCCTGCTAGCCAAACTCAGAAACCTTCTGGTCCTCCAATTCCTGGGATCTCTATGCCAATGCCATTTCATCAGCCACAGGTTTCTCTGCAGTTTGGTGGCCCCAACCAGCAGATTCAGTCACAGGGTATGACTGCCAATTCACTCCAAATGCCTGTGCCAATTCCACTACCAATAGGTAGCTCTCAAGTACAGCAGTCAATGTTCGTTTCAGGTTTACAACCCCATCCCATGCAGCCTCCTGGAATTATGCATCAGGGCCAGAGCCTGGGTTTTACCCCTCAAATGGGTCCTCAGCTGCCTCAGTTGAACAACTTGGGGATTGGTATAGGTGCACAATACCCCCAACAGCAAGGTGGAAAGTTTGCAGGCCCTCGTAAAACTCCTGTCAAGATTACACATCCAGATACACATGAAGAGTTGAGGCTTGATAAACGGGCAGATTCATATCCAGATGGTGGCTCATCAGCCGCCAGGACTCACCCTAATGTTTCTCAATCCCAGCCCATGCCTTCGTTTGCGAGTTCTCATCCTACAAGCTATTATACCAATTCTTACAATCCTAATCCCCTGTTTTTTTCATCTCCGAATTCGCATCCTTTAACAAGTAGTCACATGCCACCCAATTCACAAGCACCACGATTTAGCTACCCAGTGAGCCAGGGTCCACCCCAAAGTATGCCTTTCATGAATCCTTCAACTCACCCACCTAACCTGGAACATGCACGGGATGTACATAATAAAATTGCCTCTGTTCCATCCGCAGCTATTCCTGTTACTGTTAAACCAGCTGTCGACTCATCGCCAAACAGCACAGCTTCTGTTGAAAAAAGTGAATTCTCAAAGCCTTCAAGGCCAGCTGGAGAAGTTATCTCATCTCATCCTCAAAGGTTTCCTGGCAGTGATCCATCAGTTAACAAATCATTGCCAGTAGTGGTAAAAGTATCTGCAGGTGTGCCGGCATCAGTTATCTCATCTCCCTCTGTTGAAAGCCAAGTTTCAAGTTCTTTATCCTCTACTTCAGTTTCCCCAGCTGAGGAGTCTGTACCAGTTGTAACCGCCACTGAAGTCAGAAAAAAGGAATCCCTTAGTCGGTCAAACTCAATTAAAGATCAGCAGAAGAAACCAGGCAAGAAAGGGAATGTTCAACCACAGCATCAGGTCGTTGGGCAATCTAGTACTACATCAAGCCTTCCTTCTCGGGCTTCAGAACATGCCATATCATCTAGTATTGGTCCTTCTGAACCTGTAGAGGGTAATACAGCTCCTGTTCCAGAAAGTATTGAATCTGTGCCAGAATTGGCCAGGGAATCACTATCAAATGTTAGTTCGGCCACTGCTGTTGTTTCTGACTCAAAGGCTGAAGCAGTTCGAGAAGGCGCCAACTCCTCCTCTTCTGAAATCAGTACTGGGGTTTCTGTCAATACTGCTGATGTTGTTCATCAAAGTCAAACAGGGAATTCTTCACTGCTGGATGAACGAGGGAAAGAGGAATTGGTGGGAGCAGAAAAACAGTCGGAAGAAAATTTGCCTGAAGGATACAAACAAGATGCTAATAGTCCTAGTATTTCTTCAGAATCTACCTCTGTGAAAAGTCTGGAATCTGTTAACAAAGCAGCAGAGCACTCTGTCGCAAAGGAAACCACTGAAGGCAATGTTATTGGAACTTCTGAAACTGCACAAGGAGGCAAAGATCAACATGTCAGGAGCAATTCAGAATTAGATGGGATGGATGCCTCTTCAAGCAGAAGTGATAGCATGGGTAATAATGAAGTAGCTTCCTCAAAACCTAGTAGACCAGATCAGCCCTCTGCTCCTTTTCAATCCACAGAATTTTCAGGTACTACTTCAAAGCATGAAGGGGAAAGTGTGGATAATACTGTTGGTGGGGGAAATATTGAGAATATTGTTAGTGGTGGTGATTCACTTACAGTGTCAGGTTCCAAGGATAAACCCCTTCCCGAACTGAGTAGAACTAAGAGTACTATTGCAAAAGGGGGGAAGAAGAAAAGAAAAGAAATTCTTTCTAAGGCTGATGCTGCTGGGGTAACCTCTGATTTATATGGGGCTTATAAGAACCCTGAAGACAAGAAAGATGTAGCATCTTCTGAGAGTGCTGAGAGCACTTCTACTAGCATATTATCAAAGCAGGAAGCTGCTGATTCTACTCAGCAAGTTTCTGCAGTCAGAGATGAAGGTGCACCGAGTAAAGCTGAGCCCGATGATTGGGAAGATGCTGCTGACATCTCTACACCGAAACTGGAAACCTCAGATAGTGGAGAACAGGCCCGTGGTGACATAGATGGGAGTGGACATGGGGCAAAGAAGTATTCCAGAGATTTTCTTCTGAAATTTTCAATGCAGTTTTCTGACCTACCAGAGGGTTTTGAGATTACGTCTGATATGTCAGAAATCTTGAATGTCAATGTGAATGCTTCTGCTTCTGTCGATTATGATTCAATCCCAAGTCCTGGAAGAATTATTGACAGGCCAGGAGGGGCAGGAAGACTTGATCGACGTGGAAGTGGATTGAATGAAGATGATAGATGGAACAAAGGCAGTAATTCCAATTTCCGCCCTGTCCAAGGAAATTTTGGTGTTCTGAGAAGTCCAGGTCCACGGGGACAAGCTCAGCATGTTAGAGGGATCCTACCTGGGCCAATTGCAGGTTCTCAGGGAGGGATGCAAAGAAATAATCCTGATGCTGACAGGTGGCAGAGAGCTACAAATTTTCAACCAAAGGGGTTGATGCCTTCACCTCAGACTCCATTACAGGTGATGCACAAAGCTGAGAGGAAGTATGAAGTAGGTAAAGTGAGTGATGAAGAACAGGCCAAGCAAAGGCAGTTGAAGGCTATATTAAACAAGCTGACTCCCCAGAATTTTGAAAGACTGTTTGAGCAAGTAAAAGTTGTTAATATTGATAATGCCACAACACTGACCGGGGTAATCTCTCAAATCTTTGATAAGGCTTTAATGGAGCCTACTTTCTGTGAGATGTATGCAAACTTCTGTTTTTATCTTGCCGCGGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACCTTTAAGAGGTTGCTTTTGAACAAGTGTCAGGAGGAATTTGAGAGGGGAGAGAGAGAGCAAGAGGAAGCCAATAAGGCTGATGAGGAGGGTGAAGTGAAACAGTCTGAAGAAGAAAGAGAAGAGAAAAGAATTAAAGCACGGAGACGAATGTTGGGTAACATTAGATTAATTGGGGAGTTATACAAGAAGAAAATGTTGACCGAGAGAATAATGCATGAGTGCATTAAAAAGTTGTTAGGTCAGCAGCAGACTCCAGATGAGGAAGATATTGAAGCTTTGTGCAAACTAATGAGCACAATTGGGGAGATGATTGATCATCCGAAAGCCAAGGAGCACATGGATGCATATTTTGAGAGGATGAAAAATCTATCGAATAACATGAAACTATCTTCTAGGGTTAGGTTCATGTTGAAGGATACAATTGATCTGCGCAAGAATAAATGGCAGCAGAGGAGGAAAGTTGAAGGACCAAAAAAAATCGAGGAAGTGCACAGAGATGCTGCACAAGAGCGACAGGCACAAGCTAGTAGGCTGGGCCGTGGTCCAGGTATGAATCCATCAGCTAGAAGGGCCCCCCCATGGAATTTAGTCCAAGAGGGTCGACTATGTTATCTCCATCAAATGCACAAATGGGTGGTTTCCGTGGGATGCCCACTCCGGCTCGTGGTTTTGGAAGTCAGGATGCCCGTGCAGATGTCCGTGTAG

Protein Analysis

1503

Amino Acids

162.04

Weight (kDa)

8.4

Isoelectric Point (pI)

62.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 1194 - 1416 1.8e-52 MIF4G domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2811
AarI CACCTGC 1 cut(s) 1679
Acc16I TGCGCA 1 cut(s) 4238
Acc36I ACCTGC 3 cut(s) 610, 1679, 3395
AccB1I GGYRCC 4 cut(s) 113, 119, 272, 2117
AccB7I CCANNNNNTGG 4 cut(s) 782, 1006, 1196, 3209
AccI GTMKAC 4 cut(s) 669, 1533, 2533, 4408
AccII CGCG 4 cut(s) 65, 253, 573, 3767
AclWI GGATC 7 cut(s) 54, 224, 237, 794, 1637, 3379, 3392
AcoI YGGCCR 2 cut(s) 2040, 2070
AcuI CTGAAG 9 cut(s) 1743, 1824, 1929, 2121, 2292, 2295, 2406, 2841, 3933
AcyI GRCGYC 3 cut(s) 114, 273, 2118
AdeI CACNNNGTG 1 cut(s) 254
AfaI GTAC 9 cut(s) 264, 282, 930, 1473, 1785, 1918, 2146, 2581, 2722
AflIII ACRYGT 1 cut(s) 2437
AjiI CACGTC 1 cut(s) 3257
AjuI GAANNNNNNNTTGG 6 cut(s) 143, 175, 2216, 2248, 3391, 3423
Alw21I GWGCWC 8 cut(s) 71, 1075, 2364, 2864, 2941, 4103, 4143, 4299
Alw26I GTCTC 4 cut(s) 29, 302, 733, 3943
Alw44I GTGCAC 3 cut(s) 1071, 2937, 4295
AlwI GGATC 7 cut(s) 54, 224, 237, 794, 1637, 3379, 3392
AlwNI CAGNNNCTG 3 cut(s) 1006, 1559, 2006
Ama87I CYCGRG 2 cut(s) 369, 1938
ApaI GGGCCC 3 cut(s) 132, 432, 4381
ApaLI GTGCAC 3 cut(s) 1071, 2937, 4295
AseI ATTAAT 1 cut(s) 3974
Asp700I GAANNNNTTC 2 cut(s) 241, 2106
AspA2I CCTAGG 1 cut(s) 197
AspLEI GCGC 5 cut(s) 116, 275, 573, 2120, 4239
AsuC2I CCSGG 1 cut(s) 3682
AsuNHI GCTAGC 1 cut(s) 746
AvaI CYCGRG 2 cut(s) 369, 1938
AvaII GGWCC 9 cut(s) 448, 489, 770, 1028, 1403, 1973, 3353, 4274, 4349
AvrII CCTAGG 1 cut(s) 197
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 6 cut(s) 132, 432, 1075, 2941, 4299, 4381
BalI TGGCCA 1 cut(s) 2042
BamHI GGATCC 2 cut(s) 229, 3384
BanI GGYRCC 4 cut(s) 113, 119, 272, 2117
BanII GRGCYC 5 cut(s) 71, 132, 432, 2958, 4381
BarI GAAGNNNNNNTAC 4 cut(s) 1960, 1992, 3731, 3763
BauI CACGAG 1 cut(s) 4469
BbsI GAAGAC 3 cut(s) 2829, 3250, 3795
Bbv12I GWGCWC 8 cut(s) 71, 1075, 2364, 2864, 2941, 4103, 4143, 4299
BbvCI CCTCAGC 3 cut(s) 687, 1032, 1773
BceAI ACGGC 2 cut(s) 599, 4329
BciVI GTATCC 3 cut(s) 83, 2270, 4216
BclI TGATCA 1 cut(s) 4120
BcnI CCSGG 1 cut(s) 3682
BcoDI GTCTC 4 cut(s) 29, 302, 733, 3943
BfmI CTRYAG 4 cut(s) 827, 1686, 1986, 2919
BfoI RGCGCY 3 cut(s) 117, 276, 2121
BfuAI ACCTGC 3 cut(s) 610, 1679, 3395
BfuI GTATCC 3 cut(s) 83, 2270, 4216
BglI GCCNNNNNGGC 2 cut(s) 1591, 3881
BlnI CCTAGG 1 cut(s) 197
BlpI GCTNAGC 2 cut(s) 2952, 3369
BmcAI AGTACT 3 cut(s) 1918, 2146, 2722
Bme18I GGWCC 9 cut(s) 448, 489, 770, 1028, 1403, 1973, 3353, 4274, 4349
BmeT110I CYCGRG 2 cut(s) 369, 1938
BmgBI CACGTC 1 cut(s) 3257
BmrI ACTGGG 2 cut(s) 1385, 2157
BmtI GCTAGC 1 cut(s) 750
BmuI ACTGGG 2 cut(s) 1385, 2157
BpiI GAAGAC 3 cut(s) 2829, 3250, 3795
BplI GAGNNNNNCTC 2 cut(s) 352, 384
BpmI CTGGAG 3 cut(s) 372, 1620, 4044
Bpu10I CCTNAGC 4 cut(s) 633, 687, 1032, 1773
Bpu1102I GCTNAGC 2 cut(s) 2952, 3369
BpuEI CTTGAG 2 cut(s) 406, 909
BpuMI CCSGG 1 cut(s) 3682
BsaBI GATNNNNATC 1 cut(s) 1185
BsaHI GRCGYC 3 cut(s) 114, 273, 2118
Bse118I RCCGGY 2 cut(s) 116, 1696
Bse1I ACTGG 5 cut(s) 1391, 1667, 1787, 2152, 3003
Bse21I CCTNAGG 1 cut(s) 108
Bse3DI GCAATG 3 cut(s) 611, 1661, 2398
Bse8I GATNNNNATC 1 cut(s) 1185
BseJI GATNNNNATC 1 cut(s) 1185
BseMI GCAATG 3 cut(s) 611, 1661, 2398
BseNI ACTGG 5 cut(s) 1391, 1667, 1787, 2152, 3003
BseRI GAGGAG 6 cut(s) 136, 1790, 2116, 2119, 3905, 4273
BseSI GKGCMC 6 cut(s) 132, 432, 1075, 2941, 4299, 4381
BseYI CCCAGC 5 cut(s) 125, 1239, 1768, 2780, 4339
BsgI GTGCAG 4 cut(s) 231, 588, 2400, 4293
Bsh1236I CGCG 4 cut(s) 65, 253, 573, 3767
BshNI GGYRCC 4 cut(s) 113, 119, 272, 2117
BsiHKAI GWGCWC 8 cut(s) 71, 1075, 2364, 2864, 2941, 4103, 4143, 4299
BsiHKCI CYCGRG 2 cut(s) 369, 1938
BsiSI CCGG 4 cut(s) 117, 1697, 3681, 4465
BslFI GGGAC 2 cut(s) 434, 3375
BsmAI GTCTC 4 cut(s) 29, 302, 733, 3943
BsmBI CGTCTC 2 cut(s) 29, 3943
BsmFI GGGAC 2 cut(s) 434, 3375
BsmI GAATGC 1 cut(s) 3175
BsoBI CYCGRG 2 cut(s) 369, 1938
Bsp120I GGGCCC 3 cut(s) 128, 428, 4377
Bsp1407I TGTACA 2 cut(s) 280, 1471
Bsp1720I GCTNAGC 2 cut(s) 2952, 3369
Bsp19I CCATGG 1 cut(s) 4385
BspFNI CGCG 4 cut(s) 65, 253, 573, 3767
BspHI TCATGA 1 cut(s) 1425
BspMAI CTGCAG 3 cut(s) 831, 1690, 2923
BspMI ACCTGC 3 cut(s) 610, 1679, 3395
BspOI GCTAGC 1 cut(s) 750
BspPI GGATC 7 cut(s) 54, 224, 237, 794, 1637, 3379, 3392
BspT107I GGYRCC 4 cut(s) 113, 119, 272, 2117
BsrDI GCAATG 3 cut(s) 611, 1661, 2398
BsrFI RCCGGY 2 cut(s) 116, 1696
BsrGI TGTACA 2 cut(s) 280, 1471
BsrI ACTGG 5 cut(s) 1391, 1667, 1787, 2152, 3003
BssAI RCCGGY 2 cut(s) 116, 1696
BssNI GRCGYC 3 cut(s) 114, 273, 2118
BssSI CACGAG 1 cut(s) 4469
BssT1I CCWWGG 7 cut(s) 197, 647, 705, 2682, 3322, 4134, 4385
Bst2BI CACGAG 1 cut(s) 4469
Bst4CI ACNGT 9 cut(s) 217, 316, 609, 1519, 2253, 2620, 2671, 3633, 3909
Bst6I CTCTTC 4 cut(s) 1149, 2137, 2482, 3921
BstACI GRCGYC 3 cut(s) 114, 273, 2118
BstAUI TGTACA 2 cut(s) 280, 1471
BstC8I GCNNGC 6 cut(s) 67, 132, 748, 1108, 1596, 1698
BstDSI CCRYGG 6 cut(s) 3028, 3356, 3765, 4345, 4385, 4449
BstEII GGTNACC 1 cut(s) 2785
BstENI CCTNNNNNAGG 3 cut(s) 3116, 3321, 3811
BstFNI CGCG 4 cut(s) 65, 253, 573, 3767
BstH2I RGCGCY 3 cut(s) 117, 276, 2121
BstHHI GCGC 5 cut(s) 116, 275, 573, 2120, 4239
BstMAI GTCTC 4 cut(s) 29, 302, 733, 3943
BstMWI GCNNNNNNNGC 7 cut(s) 122, 131, 689, 1591, 2777, 3881, 4376
BstNSI RCATGY 5 cut(s) 1357, 1463, 1955, 2441, 3377
BstPI GGTNACC 1 cut(s) 2785
BstSFI CTRYAG 4 cut(s) 827, 1686, 1986, 2919
BstSLI GKGCMC 6 cut(s) 132, 432, 1075, 2941, 4299, 4381
BstUI CGCG 4 cut(s) 65, 253, 573, 3767
BstV2I GAAGAC 3 cut(s) 2829, 3250, 3795
BstX2I RGATCY 3 cut(s) 229, 786, 3384
BstYI RGATCY 3 cut(s) 229, 786, 3384
Bsu36I CCTNAGG 1 cut(s) 108
BsuI GTATCC 3 cut(s) 83, 2270, 4216
BtgI CCRYGG 6 cut(s) 3028, 3356, 3765, 4345, 4385, 4449
BtgZI GCGATG 1 cut(s) 1524
BtrI CACGTC 1 cut(s) 3257
BtsI GCAGTG 3 cut(s) 1645, 2073, 2204
BveI ACCTGC 3 cut(s) 610, 1679, 3395
Cac8I GCNNGC 6 cut(s) 67, 132, 748, 1108, 1596, 1698
CaiI CAGNNNCTG 3 cut(s) 1006, 1559, 2006
CciI TCATGA 1 cut(s) 1425
CfoI GCGC 5 cut(s) 116, 275, 573, 2120, 4239
Cfr10I RCCGGY 2 cut(s) 116, 1696
Cfr42I CCGCGG 1 cut(s) 3768
CseI GACGC 2 cut(s) 46, 450
Csp6I GTAC 9 cut(s) 263, 281, 929, 1472, 1784, 1917, 2145, 2580, 2721
CspCI CAANNNNNGTGG 2 cut(s) 2062, 2097
CviQI GTAC 9 cut(s) 263, 281, 929, 1472, 1784, 1917, 2145, 2580, 2721
DinI GGCGCC 3 cut(s) 115, 274, 2119
DraIII CACNNNGTG 1 cut(s) 254
EaeI YGGCCR 2 cut(s) 2040, 2070
Eam1104I CTCTTC 4 cut(s) 1149, 2137, 2482, 3921
EarI CTCTTC 4 cut(s) 1149, 2137, 2482, 3921
EciI GGCGGA 1 cut(s) 3302
Ecl136II GAGCTC 1 cut(s) 69
Eco130I CCWWGG 7 cut(s) 197, 647, 705, 2682, 3322, 4134, 4385
Eco24I GRGCYC 5 cut(s) 71, 132, 432, 2958, 4381
Eco47I GGWCC 9 cut(s) 448, 489, 770, 1028, 1403, 1973, 3353, 4274, 4349
Eco53kI GAGCTC 1 cut(s) 69
Eco57I CTGAAG 9 cut(s) 1743, 1824, 1929, 2121, 2292, 2295, 2406, 2841, 3933
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 2 cut(s) 369, 1938
Eco91I GGTNACC 1 cut(s) 2785
EcoICRI GAGCTC 1 cut(s) 69
EcoNI CCTNNNNNAGG 3 cut(s) 3116, 3321, 3811
EcoO109I RGGNCCY 6 cut(s) 428, 448, 1028, 1109, 4377, 4378
EcoO65I GGTNACC 1 cut(s) 2785
EcoRI GAATTC 4 cut(s) 412, 1327, 1574, 2197
EcoT14I CCWWGG 7 cut(s) 197, 647, 705, 2682, 3322, 4134, 4385
EcoT22I ATGCAT 3 cut(s) 993, 4023, 4153
EcoT38I GRGCYC 5 cut(s) 71, 132, 432, 2958, 4381
EgeI GGCGCC 3 cut(s) 115, 274, 2119
EheI GGCGCC 3 cut(s) 115, 274, 2119
ErhI CCWWGG 7 cut(s) 197, 647, 705, 2682, 3322, 4134, 4385
Esp3I CGTCTC 2 cut(s) 29, 3943
FalI AAGNNNNNCTT 8 cut(s) 1405, 1437, 1918, 1950, 2745, 2777, 3791, 3823
FaqI GGGAC 2 cut(s) 434, 3375
FauI CCCGC 2 cut(s) 106, 139
FbaI TGATCA 1 cut(s) 4120
FblI GTMKAC 4 cut(s) 669, 1533, 2533, 4408
FriOI GRGCYC 5 cut(s) 71, 132, 432, 2958, 4381
FspI TGCGCA 1 cut(s) 4238
GlaI GCGC 5 cut(s) 115, 274, 572, 2119, 4238
GsaI CCCAGC 5 cut(s) 129, 1243, 1772, 2784, 4343
GsuI CTGGAG 3 cut(s) 372, 1620, 4044
HaeII RGCGCY 3 cut(s) 117, 276, 2121
HapII CCGG 4 cut(s) 117, 1697, 3681, 4465
HgaI GACGC 2 cut(s) 46, 450
HhaI GCGC 5 cut(s) 116, 275, 573, 2120, 4239
Hin1I GRCGYC 3 cut(s) 114, 273, 2118
Hin6I GCGC 5 cut(s) 114, 273, 571, 2118, 4237
HinP1I GCGC 5 cut(s) 114, 273, 571, 2118, 4237
HincII GTYRAC 6 cut(s) 670, 1534, 1654, 2347, 4005, 4409
HindII GTYRAC 6 cut(s) 670, 1534, 1654, 2347, 4005, 4409
HindIII AAGCTT 1 cut(s) 4080
HpaI GTTAAC 2 cut(s) 1654, 2347
HpaII CCGG 4 cut(s) 117, 1697, 3681, 4465
Hpy99I CGWCG 1 cut(s) 3258
HpyCH4III ACNGT 9 cut(s) 217, 316, 609, 1519, 2253, 2620, 2671, 3633, 3909
HpyCH4IV ACGT 2 cut(s) 3134, 3256
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 131, 689, 1591, 2777, 3881, 4376
HpySE526I ACGT 2 cut(s) 3134, 3256
Hsp92I GRCGYC 3 cut(s) 114, 273, 2118
HspAI GCGC 5 cut(s) 114, 273, 571, 2118, 4237
KasI GGCGCC 3 cut(s) 113, 272, 2117
KroI GCCGGC 1 cut(s) 1696
KroNI GCCGGC 1 cut(s) 1698
Ksp22I TGATCA 1 cut(s) 4120
KspAI GTTAAC 2 cut(s) 1654, 2347
KspI CCGCGG 1 cut(s) 3768
MaeII ACGT 2 cut(s) 3134, 3256
MaeIII GTNAC 8 cut(s) 316, 858, 1349, 1513, 1792, 2785, 3032, 3962
MfeI CAATTG 3 cut(s) 3399, 4104, 4227
MflI RGATCY 3 cut(s) 229, 786, 3384
MlsI TGGCCA 1 cut(s) 2042
MluNI TGGCCA 1 cut(s) 2042
Mly113I GGCGCC 3 cut(s) 114, 273, 2118
MlyI GAGTC 9 cut(s) 413, 599, 1210, 1529, 1787, 2084, 3496, 3604, 4051
MmeI TCCRAC 2 cut(s) 174, 2235
Mox20I TGGCCA 1 cut(s) 2042
Mph1103I ATGCAT 3 cut(s) 993, 4023, 4153
MroNI GCCGGC 1 cut(s) 1696
MroXI GAANNNNTTC 2 cut(s) 241, 2106
MscI TGGCCA 1 cut(s) 2042
MslI CAYNNNNRTG 3 cut(s) 1224, 4146, 4302
Msp20I TGGCCA 1 cut(s) 2042
MspA1I CMGCKG 6 cut(s) 125, 1036, 1529, 1598, 1772, 3767
MspI CCGG 4 cut(s) 117, 1697, 3681, 4465
MunI CAATTG 3 cut(s) 3399, 4104, 4227
Mva1269I GAATGC 1 cut(s) 3175
MvnI CGCG 4 cut(s) 65, 253, 573, 3767
MwoI GCNNNNNNNGC 7 cut(s) 122, 131, 689, 1591, 2777, 3881, 4376
NaeI GCCGGC 1 cut(s) 1698
NarI GGCGCC 3 cut(s) 114, 273, 2118
NciI CCSGG 1 cut(s) 3682
NcoI CCATGG 1 cut(s) 4385
NgoMIV GCCGGC 1 cut(s) 1696
NheI GCTAGC 1 cut(s) 746
NmeAIII GCCGAG 1 cut(s) 521
NmuCI GTSAC 3 cut(s) 858, 1349, 3032
NsbI TGCGCA 1 cut(s) 4238
NsiI ATGCAT 3 cut(s) 993, 4023, 4153
NspI RCATGY 5 cut(s) 1357, 1463, 1955, 2441, 3377
PaeR7I CTCGAG 1 cut(s) 369
PagI TCATGA 1 cut(s) 1425
PaqCI CACCTGC 1 cut(s) 1679
PciI ACATGT 1 cut(s) 2437
PctI GAATGC 1 cut(s) 3175
PdiI GCCGGC 1 cut(s) 1698
PdmI GAANNNNTTC 2 cut(s) 241, 2106
PflMI CCANNNNNTGG 4 cut(s) 782, 1006, 1196, 3209
PfoI TCCNGGA 3 cut(s) 232, 979, 3208
PleI GAGTC 9 cut(s) 413, 598, 1210, 1529, 1786, 2084, 3496, 3604, 4051
PluTI GGCGCC 3 cut(s) 117, 276, 2121
PpsI GAGTC 9 cut(s) 413, 598, 1210, 1529, 1786, 2084, 3496, 3604, 4051
PpuMI RGGWCCY 2 cut(s) 448, 1028
PscI ACATGT 1 cut(s) 2437
PshBI ATTAAT 1 cut(s) 3974
PsiI TTATAA 1 cut(s) 2811
Psp124BI GAGCTC 1 cut(s) 71
Psp5II RGGWCCY 2 cut(s) 448, 1028
PspEI GGTNACC 1 cut(s) 2785
PspFI CCCAGC 5 cut(s) 125, 1239, 1768, 2780, 4339
PspOMI GGGCCC 3 cut(s) 128, 428, 4377
PspPPI RGGWCCY 2 cut(s) 448, 1028
PsrI GAACNNNNNNTAC 4 cut(s) 74, 106, 2704, 2736
PstI CTGCAG 3 cut(s) 831, 1690, 2923
PstNI CAGNNNCTG 3 cut(s) 1006, 1559, 2006
PsuI RGATCY 3 cut(s) 229, 786, 3384
PvuII CAGCTG 4 cut(s) 1036, 1529, 1598, 1772
RsaI GTAC 9 cut(s) 264, 282, 930, 1473, 1785, 1918, 2146, 2581, 2722
RsaNI GTAC 9 cut(s) 263, 281, 929, 1472, 1784, 1917, 2145, 2580, 2721
RseI CAYNNNNRTG 3 cut(s) 1224, 4146, 4302
SacI GAGCTC 1 cut(s) 71
SacII CCGCGG 1 cut(s) 3768
SalI GTCGAC 3 cut(s) 668, 1532, 4407
ScaI AGTACT 3 cut(s) 1918, 2146, 2722
SchI GAGTC 9 cut(s) 413, 599, 1210, 1529, 1787, 2084, 3496, 3604, 4051
SfcI CTRYAG 4 cut(s) 827, 1686, 1986, 2919
SfoI GGCGCC 3 cut(s) 115, 274, 2119
Sfr274I CTCGAG 1 cut(s) 369
Sfr303I CCGCGG 1 cut(s) 3768
SgrAI CRCCGGYG 1 cut(s) 116
SgrBI CCGCGG 1 cut(s) 3768
SinI GGWCC 9 cut(s) 448, 489, 770, 1028, 1403, 1973, 3353, 4274, 4349
SlaI CTCGAG 1 cut(s) 369
SmiMI CAYNNNNRTG 3 cut(s) 1224, 4146, 4302
SmlI CTYRAG 3 cut(s) 369, 421, 924
SmoI CTYRAG 3 cut(s) 369, 421, 924
SspDI GGCGCC 3 cut(s) 113, 272, 2117
SspI AATATT 3 cut(s) 2635, 2644, 3658
SstI GAGCTC 1 cut(s) 71
StyI CCWWGG 7 cut(s) 197, 647, 705, 2682, 3322, 4134, 4385
TaaI ACNGT 9 cut(s) 217, 316, 609, 1519, 2253, 2620, 2671, 3633, 3909
TaiI ACGT 2 cut(s) 3137, 3259
TaqII GACCGA 2 cut(s) 1821, 4022
TatI WGTACW 6 cut(s) 280, 928, 1471, 1916, 2144, 2720
TauI GCSGC 4 cut(s) 125, 289, 1211, 3767
TseFI GTSAC 3 cut(s) 858, 1349, 3032
Tsp45I GTSAC 3 cut(s) 858, 1349, 3032
TspGWI ACGGA 4 cut(s) 312, 3961, 4438, 4495
Van91I CCANNNNNTGG 4 cut(s) 782, 1006, 1196, 3209
VneI GTGCAC 3 cut(s) 1071, 2937, 4295
VpaK11BI GGWCC 9 cut(s) 448, 489, 770, 1028, 1403, 1973, 3353, 4274, 4349
VspI ATTAAT 1 cut(s) 3974
XagI CCTNNNNNAGG 3 cut(s) 3116, 3321, 3811
XceI RCATGY 5 cut(s) 1357, 1463, 1955, 2441, 3377
XcmI CCANNNNNNNNNTGG 3 cut(s) 1091, 3329, 4141
XhoI CTCGAG 1 cut(s) 369
XmaJI CCTAGG 1 cut(s) 197
XmiI GTMKAC 4 cut(s) 669, 1533, 2533, 4408
XmnI GAANNNNTTC 2 cut(s) 241, 2106
ZrmI AGTACT 3 cut(s) 1918, 2146, 2722
Zsp2I ATGCAT 3 cut(s) 993, 4023, 4153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.