Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000945

Physical Location & Seq

Genomic Coordinates Reverse (-)

31504969 .. 31514567

Gene Structure 9599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00309730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGTTGGGTAACATTAGATTAATTGGGGAGTTATACAAGAAGAAAATGTTGACCGAGAGAATAATGCATGAGTGCATCAAAAAGTTGTTAGGTCAGCAGCAGACTCCAGATGAGGAAGATATTGAAGCTTTGTGCAAACTAATGAGCACAATTGGGGAGATGATTGATCATCCGAAAGCCAAGGAGCACATGGATGCATATTTTGAGAGGATGAAAAGTCTATCGAATAACATGAAGCTATCTTCTAGGGTTAGGTTCATGTTGAAGGATACAATTGATCTGCGCAAGAATAAATGGCAGCAGAGGAGGAAAGTTGAAGGACCAAAAAAAATTGAGGAAGTGCACAGAGATGCTGCACAAGAGCGACAGGCACAAGCTAGTAGGCTGGGCCGTGGTCCAGGTATGAATCCATCAGCTAGAAGGGGGCCCCCCATGGAATTTAGTCCAAGAGGGTCGACTATGTTATCTCCATCAAATGCACAAATGGGTGGTTTCCGTGGGATGCCCACTCCGGCTCGTGGTTTTGGAAGTCAGGATGCCCGTGCAGATGTCCGTGCAGATGAAAGACATTCTTATGAGGGTAGGACCTTGTCAGCCTTGACACAAAGACCTATGGGTGATGATTCCATTACTTTGGGTCCCCAGGGTGGTCTTGCCAGAGGAATGTCTGTCAGAGGACCGCCTTCAATGTCAGCTGCTCTGCCTGAGATATCTCCTAATCCTGGAGACTCCAGGAGGATGACAGCTGGTTTGAATGGTTTTAGTTCCCTCTCAGAGCGGGGAACTTACAACCCTAGGGAGGATCTAATGCCAAGATTTGTGCCCGATAGATTTGGAGGTCCAGCTGCTTATGATCAGTCAAGTGCCCCAGAGCGTAATATAAATTTTGGTGGTAGGGACCCAAGGAGTTCAGAACGTAGTTTCGATAGATCTCTGACTTCACCATCCACACGTACACAGGGGGCAGCTTTAACTCAAAATGTTCCTTCAGAAAAGTCGGAAGAATGTCTTAGAGATATGTCGTTGGGAGCAATTAAGGAATTTTACAGTGCCCGAGACGAGAAGGAAGTTGCTCTATGCATCAAAGACTTGAACTCACCAAGCTTCCATCCAACAATGATATATCTTTGGGTCACAGACTCTTTTGAGAGGAAGGACGGAGAGAGAGATCTCTTCGCAAAGCTTCTAGTTAATCTTACCAAGTCCCAGGATGGAACTTTGAGTCAGTCCCAGCTCATCAAAGGGTTTGAAAATGTTCTCTCCACCTTGGAGGATGCCGTGAATGATGCCCCTAGAGCACCAGAGTTTCTTGCCCGGATATTTGCCAAAGGCATTTTAGAAAATGTAGTTTCGTTGAATCAGGTTGGGCAATTAATACATGAAGGTGGGGAGGAGCCAGGACGGCTTCTGGAAGTTGGGCTTGCAGGCAATGTTCTCGGAAATATCTTGGAGATAATCAAATCAGAGAAAGGAGAGAGTGTACTCAATGAGATTCGTACGTCCTCCAACTTGCGGTTGGAGAATTTCCGGCCTCCAGATCCTCTCAAATCAAGGACACTAGAGAAATTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

524

Amino Acids

58.31

Weight (kDa)

8.84

Isoelectric Point (pI)

54.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	1 - 98	9.8e-27	MIF4G domain
MA3	PF02847	344 - 449	3.2e-16	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60240 AT3G60240 AT3G60240
fragaria_vesca	FvH4_7g08960 FvH4_7g08960 FvH4_7g08960 FvH4_7g08960
malus_domestica	MD02G1222000.v1.1 MD07G1093700.v1.1 MD07G1093900.v1.1 MD07G1094000.v1.1 MD07G1094100.v1.1 MD07G1094200.v1.1 MD07G1094300.v1.1 MD07G1094400.v1.1
prunus_persica	Prupe.2G118700_v2.0.a1
pyrus_communis	pycom02g18790 pycom07g07670 pycom07g07680 pycom07g07690 pycom07g07730 pycom07g07740 pycom07g07750 pycom07g07760 pycom07g07770 pycom07g07780 pycom12419g00310 pycom15g30700
rosa_chinensis	RchiOBHm_Chr1g0344441 RchiOBHm_Chr1g0344451 RchiOBHm_Chr5g0038171
rosa_laevigata	RLG00000028873 RLG00000028874 RLG00000028899 RLG00000033837
rosa_multiflora	Rmu_sc0002670.1_g000001 Rmu_sc0010876.1_g000002 Rmu_sc0015248.1_g000009 Rmu_sc0015248.1_g000010
rosa_roxburghii	Rroxscaffold_1G00042800 Rroxscaffold_1G00042810 Rroxscaffold_4G00309730
rosa_rugosa	Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug05G0171200 Rorug05G0171300 Rorug05G0171300
rosa_samantha	Rh1AG190800 Rh1BG157200 Rh1BG157300 Rh1CG176100 Rh1DG188400 Rh1DG188600 Rh5AG258600 Rh5BG262200 Rh5CG294400 Rh5CG294500 Rh5CG294600 Rh5CG294700 Rh5DG271300 Rh6AG374400
rosa_wichuraiana	Rw1G015670 Rw5G024210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	284
AccBSI	CCGCTC	1 cut(s)	778
AccI	GTMKAC	1 cut(s)	455
AciI	CCGC	3 cut(s)	680, 778, 1513
AclWI	GGATC	2 cut(s)	810, 1532
AcsI	RAATTY	5 cut(s)	437, 883, 1040, 1522, 1565
AcuI	CTGAAG	1 cut(s)	972
AfaI	GTAC	3 cut(s)	955, 1482, 1498
AfiI	CCNNNNNNNGG	5 cut(s)	518, 647, 722, 799, 1512
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	8 cut(s)	125, 265, 317, 687, 754, 1093, 1250, 1357
AjnI	CCWGG	6 cut(s)	397, 642, 721, 731, 1206, 1396
Alw21I	GWGCWC	4 cut(s)	149, 189, 345, 1300
Alw26I	GTCTC	2 cut(s)	720, 1050
Alw44I	GTGCAC	1 cut(s)	341
AlwI	GGATC	2 cut(s)	810, 1532
Ama87I	CYCGRG	1 cut(s)	1053
AoxI	GGCC	3 cut(s)	388, 425, 1529
ApaI	GGGCCC	1 cut(s)	429
ApaLI	GTGCAC	1 cut(s)	341
ApeKI	GCWGC	6 cut(s)	97, 298, 353, 695, 845, 965
ApoI	RAATTY	5 cut(s)	437, 883, 1040, 1522, 1565
ArsI	GACNNNNNNTTYG	2 cut(s)	733, 765
AseI	ATTAAT	2 cut(s)	20, 1373
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspA2I	CCTAGG	1 cut(s)	794
AspLEI	GCGC	1 cut(s)	285
AsuC2I	CCSGG	1 cut(s)	1315
AsuHPI	GGTGA	3 cut(s)	629, 933, 1089
AvaI	CYCGRG	1 cut(s)	1053
AvaII	GGWCC	7 cut(s)	320, 395, 585, 638, 677, 839, 898
AvrII	CCTAGG	1 cut(s)	794
BaeGI	GKGCMC	5 cut(s)	345, 429, 825, 868, 1054
BanII	GRGCYC	1 cut(s)	429
BauI	CACGAG	1 cut(s)	516
Bbv12I	GWGCWC	4 cut(s)	149, 189, 345, 1300
BbvI	GCAGC	6 cut(s)	109, 310, 340, 682, 832, 977
BccI	CCATC	5 cut(s)	418, 478, 952, 1116, 1205
BceAI	ACGGC	3 cut(s)	375, 1262, 1418
BcgI	CGANNNNNNTGC	2 cut(s)	1417, 1451
BciT130I	CCWGG	6 cut(s)	399, 644, 723, 733, 1208, 1398
BciVI	GTATCC	1 cut(s)	262
BclI	TGATCA	2 cut(s)	166, 853
BcnI	CCSGG	1 cut(s)	1315
BcoDI	GTCTC	2 cut(s)	720, 1050
BfaI	CTAG	7 cut(s)	246, 378, 417, 795, 1187, 1293, 1559
BfuI	GTATCC	1 cut(s)	262
BglI	GCCNNNNNGGC	1 cut(s)	1402
BglII	AGATCT	2 cut(s)	929, 1168
BisI	GCNGC	6 cut(s)	98, 299, 354, 696, 846, 966
BlnI	CCTAGG	1 cut(s)	794
BlsI	GCNGC	6 cut(s)	99, 300, 355, 697, 847, 967
Bme1390I	CCNGG	7 cut(s)	399, 644, 723, 733, 1208, 1315, 1398
Bme18I	GGWCC	7 cut(s)	320, 395, 585, 638, 677, 839, 898
BmeT110I	CYCGRG	1 cut(s)	1053
BmiI	GGNNCC	8 cut(s)	426, 427, 428, 639, 640, 899, 900, 1395
BmrFI	CCNGG	7 cut(s)	399, 644, 723, 733, 1208, 1315, 1398
BmsI	GCATC	8 cut(s)	84, 184, 340, 492, 526, 1089, 1264, 1276
BpmI	CTGGAG	4 cut(s)	90, 715, 744, 1518
BpuMI	CCSGG	1 cut(s)	1315
BsaAI	YACGTR	1 cut(s)	953
BsaXI	ACNNNNNCTCC	2 cut(s)	1464, 1494
Bsc4I	CCNNNNNNNGG	5 cut(s)	518, 647, 722, 799, 1512
Bse3DI	GCAATG	1 cut(s)	1435
BseBI	CCWGG	6 cut(s)	399, 644, 723, 733, 1208, 1398
BseLI	CCNNNNNNNGG	5 cut(s)	518, 647, 722, 799, 1512
BseMI	GCAATG	1 cut(s)	1435
BseMII	CTCAG	2 cut(s)	696, 786
BseRI	GAGGAG	2 cut(s)	319, 1406
BseSI	GKGCMC	5 cut(s)	345, 429, 825, 868, 1054
BseXI	GCAGC	6 cut(s)	109, 310, 340, 682, 832, 977
BseYI	CCCAGC	2 cut(s)	385, 1230
BsgI	GTGCAG	3 cut(s)	339, 564, 576
BshFI	GGCC	3 cut(s)	390, 427, 1531
BsiHKAI	GWGCWC	4 cut(s)	149, 189, 345, 1300
BsiHKCI	CYCGRG	1 cut(s)	1053
BsiSI	CCGG	3 cut(s)	512, 1315, 1528
BsiWI	CGTACG	1 cut(s)	1496
BslFI	GGGAC	4 cut(s)	624, 911, 1189, 1213
BslI	CCNNNNNNNGG	5 cut(s)	518, 647, 722, 799, 1512
BsmAI	GTCTC	2 cut(s)	720, 1050
BsmBI	CGTCTC	1 cut(s)	1050
BsmFI	GGGAC	4 cut(s)	624, 911, 1189, 1213
BsnI	GGCC	3 cut(s)	390, 427, 1531
BsoBI	CYCGRG	1 cut(s)	1053
Bsp120I	GGGCCC	1 cut(s)	425
Bsp1286I	GDGCHC	8 cut(s)	149, 189, 345, 429, 825, 868, 1054, 1300
Bsp143I	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
Bsp19I	CCATGG	1 cut(s)	432
BspACI	CCGC	3 cut(s)	680, 778, 1513
BspANI	GGCC	3 cut(s)	390, 427, 1531
BspCNI	CTCAG	2 cut(s)	697, 785
BspLI	GGNNCC	8 cut(s)	426, 427, 428, 639, 640, 899, 900, 1395
BspPI	GGATC	2 cut(s)	810, 1532
BsrBI	CCGCTC	1 cut(s)	778
BsrDI	GCAATG	1 cut(s)	1435
BssMI	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	5 cut(s)	180, 432, 794, 902, 1266
Bst2BI	CACGAG	1 cut(s)	516
Bst2UI	CCWGG	6 cut(s)	399, 644, 723, 733, 1208, 1398
Bst4CI	ACNGT	1 cut(s)	1049
Bst6I	CTCTTC	1 cut(s)	1178
BstBAI	YACGTR	1 cut(s)	953
BstC8I	GCNNGC	2 cut(s)	1422, 1426
BstDEI	CTNAG	3 cut(s)	705, 772, 1010
BstDSI	CCRYGG	3 cut(s)	391, 432, 496
BstHHI	GCGC	1 cut(s)	285
BstKTI	GATC	7 cut(s)	169, 280, 805, 856, 932, 1171, 1540
BstMAI	GTCTC	2 cut(s)	720, 1050
BstMBI	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
BstMWI	GCNNNNNNNGC	2 cut(s)	1295, 1402
BstNI	CCWGG	6 cut(s)	399, 644, 723, 733, 1208, 1398
BstSCI	CCNGG	7 cut(s)	397, 642, 721, 731, 1206, 1313, 1396
BstSLI	GKGCMC	5 cut(s)	345, 429, 825, 868, 1054
BstV1I	GCAGC	6 cut(s)	109, 310, 340, 682, 832, 977
BstX2I	RGATCY	4 cut(s)	802, 929, 1168, 1537
BstXI	CCANNNNNNTGG	1 cut(s)	634
BstYI	RGATCY	4 cut(s)	802, 929, 1168, 1537
BsuI	GTATCC	1 cut(s)	262
BsuRI	GGCC	3 cut(s)	390, 427, 1531
BtgI	CCRYGG	3 cut(s)	391, 432, 496
BtsIMutI	CAGTG	1 cut(s)	1054
Cac8I	GCNNGC	2 cut(s)	1422, 1426
CfoI	GCGC	1 cut(s)	285
Csp6I	GTAC	3 cut(s)	954, 1481, 1497
CviAII	CATG	6 cut(s)	68, 190, 232, 259, 433, 1379
CviQI	GTAC	3 cut(s)	954, 1481, 1497
DdeI	CTNAG	3 cut(s)	705, 772, 1010
DpnI	GATC	7 cut(s)	168, 279, 804, 855, 931, 1170, 1539
DpnII	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
Eam1104I	CTCTTC	1 cut(s)	1178
EarI	CTCTTC	1 cut(s)	1178
Eco130I	CCWWGG	5 cut(s)	180, 432, 794, 902, 1266
Eco24I	GRGCYC	1 cut(s)	429
Eco32I	GATATC	1 cut(s)	711
Eco47I	GGWCC	7 cut(s)	320, 395, 585, 638, 677, 839, 898
Eco57I	CTGAAG	1 cut(s)	972
Eco88I	CYCGRG	1 cut(s)	1053
EcoO109I	RGGNCCY	5 cut(s)	425, 426, 585, 638, 898
EcoRII	CCWGG	6 cut(s)	397, 642, 721, 731, 1206, 1396
EcoRV	GATATC	1 cut(s)	711
EcoT14I	CCWWGG	5 cut(s)	180, 432, 794, 902, 1266
EcoT22I	ATGCAT	3 cut(s)	69, 199, 1082
EcoT38I	GRGCYC	1 cut(s)	429
ErhI	CCWWGG	5 cut(s)	180, 432, 794, 902, 1266
Esp3I	CGTCTC	1 cut(s)	1050
FaeI	CATG	6 cut(s)	71, 193, 235, 262, 436, 1382
FalI	AAGNNNNNCTT	6 cut(s)	556, 588, 993, 1025, 1404, 1436
FaqI	GGGAC	4 cut(s)	624, 911, 1189, 1213
FatI	CATG	6 cut(s)	67, 189, 231, 258, 432, 1378
FauI	CCCGC	1 cut(s)	771
FbaI	TGATCA	2 cut(s)	166, 853
FblI	GTMKAC	1 cut(s)	455
Fnu4HI	GCNGC	6 cut(s)	98, 299, 354, 696, 846, 966
FriOI	GRGCYC	1 cut(s)	429
Fsp4HI	GCNGC	6 cut(s)	98, 299, 354, 696, 846, 966
FspBI	CTAG	7 cut(s)	246, 378, 417, 795, 1187, 1293, 1559
FspI	TGCGCA	1 cut(s)	284
GlaI	GCGC	1 cut(s)	284
GluI	GCNGC	6 cut(s)	98, 299, 354, 696, 846, 966
GsaI	CCCAGC	2 cut(s)	389, 1234
GsuI	CTGGAG	4 cut(s)	90, 715, 744, 1518
HaeIII	GGCC	3 cut(s)	390, 427, 1531
HapII	CCGG	3 cut(s)	512, 1315, 1528
HhaI	GCGC	1 cut(s)	285
Hin1II	CATG	6 cut(s)	71, 193, 235, 262, 436, 1382
Hin6I	GCGC	1 cut(s)	283
HinP1I	GCGC	1 cut(s)	283
HincII	GTYRAC	2 cut(s)	51, 456
HindII	GTYRAC	2 cut(s)	51, 456
HindIII	AAGCTT	3 cut(s)	126, 1102, 1181
HinfI	GANTC	8 cut(s)	103, 406, 623, 728, 1139, 1222, 1357, 1492
HpaII	CCGG	3 cut(s)	512, 1315, 1528
HphI	GGTGA	3 cut(s)	629, 933, 1089
Hpy166II	GTNNAC	5 cut(s)	51, 343, 456, 956, 1481
Hpy188I	TCNGA	9 cut(s)	174, 674, 775, 913, 936, 991, 1000, 1439, 1465
Hpy188III	TCNNGA	4 cut(s)	107, 533, 1409, 1535
Hpy8I	GTNNAC	5 cut(s)	51, 343, 456, 956, 1481
HpyAV	CCTTC	8 cut(s)	259, 311, 414, 693, 996, 1057, 1147, 1376
HpyCH4III	ACNGT	1 cut(s)	1049
HpyCH4IV	ACGT	3 cut(s)	916, 952, 1499
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1295, 1402
HpyF3I	CTNAG	3 cut(s)	705, 772, 1010
HpySE526I	ACGT	3 cut(s)	916, 952, 1499
Hsp92II	CATG	6 cut(s)	71, 193, 235, 262, 436, 1382
HspAI	GCGC	1 cut(s)	283
KflI	GGGWCCC	2 cut(s)	638, 898
Ksp22I	TGATCA	2 cut(s)	166, 853
Kzo9I	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
LmnI	GCTCC	3 cut(s)	184, 1028, 1393
Lsp1109I	GCAGC	6 cut(s)	109, 310, 340, 682, 832, 977
LweI	GCATC	8 cut(s)	84, 184, 340, 492, 526, 1089, 1264, 1276
MaeI	CTAG	7 cut(s)	246, 378, 417, 795, 1187, 1293, 1559
MaeII	ACGT	3 cut(s)	916, 952, 1499
MaeIII	GTNAC	2 cut(s)	8, 1132
MalI	GATC	7 cut(s)	168, 279, 804, 855, 931, 1170, 1539
MbiI	CCGCTC	1 cut(s)	778
MboI	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
MboII	GAAGA	5 cut(s)	52, 128, 234, 1013, 1165
MfeI	CAATTG	2 cut(s)	150, 273
MflI	RGATCY	4 cut(s)	802, 929, 1168, 1537
MhlI	GDGCHC	8 cut(s)	149, 189, 345, 429, 825, 868, 1054, 1300
MlyI	GAGTC	4 cut(s)	97, 722, 1133, 1231
MmeI	TCCRAC	4 cut(s)	978, 1136, 1497, 1530
Mph1103I	ATGCAT	3 cut(s)	69, 199, 1082
MroXI	GAANNNNTTC	1 cut(s)	1254
MseI	TTAA	5 cut(s)	20, 971, 1035, 1191, 1373
MslI	CAYNNNNRTG	4 cut(s)	192, 348, 573, 1383
MspA1I	CMGCKG	3 cut(s)	695, 746, 845
MspI	CCGG	3 cut(s)	512, 1315, 1528
MspR9I	CCNGG	7 cut(s)	399, 644, 723, 733, 1208, 1315, 1398
MunI	CAATTG	2 cut(s)	150, 273
MvaI	CCWGG	6 cut(s)	399, 644, 723, 733, 1208, 1398
MwoI	GCNNNNNNNGC	2 cut(s)	1295, 1402
NciI	CCSGG	1 cut(s)	1315
NcoI	CCATGG	1 cut(s)	432
NdeII	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
NlaIII	CATG	6 cut(s)	71, 193, 235, 262, 436, 1382
NlaIV	GGNNCC	8 cut(s)	426, 427, 428, 639, 640, 899, 900, 1395
NmuCI	GTSAC	1 cut(s)	1132
NsbI	TGCGCA	1 cut(s)	284
NsiI	ATGCAT	3 cut(s)	69, 199, 1082
PasI	CCCWGGG	1 cut(s)	643
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	4 cut(s)	406, 623, 1357, 1492
Pfl23II	CGTACG	1 cut(s)	1496
PflFI	GACNNNGTC	1 cut(s)	589
PfoI	TCCNGGA	2 cut(s)	721, 731
PkrI	GCNGC	6 cut(s)	99, 300, 355, 697, 847, 967
PleI	GAGTC	4 cut(s)	97, 722, 1133, 1230
PpsI	GAGTC	4 cut(s)	97, 722, 1133, 1230
Ppu21I	YACGTR	1 cut(s)	953
PpuMI	RGGWCCY	3 cut(s)	585, 638, 898
PshBI	ATTAAT	2 cut(s)	20, 1373
Psp5II	RGGWCCY	3 cut(s)	585, 638, 898
Psp6I	CCWGG	6 cut(s)	397, 642, 721, 731, 1206, 1396
PspFI	CCCAGC	2 cut(s)	385, 1230
PspGI	CCWGG	6 cut(s)	397, 642, 721, 731, 1206, 1396
PspLI	CGTACG	1 cut(s)	1496
PspN4I	GGNNCC	8 cut(s)	426, 427, 428, 639, 640, 899, 900, 1395
PspOMI	GGGCCC	1 cut(s)	425
PspPPI	RGGWCCY	3 cut(s)	585, 638, 898
PsuI	RGATCY	4 cut(s)	802, 929, 1168, 1537
PsyI	GACNNNGTC	1 cut(s)	589
PvuII	CAGCTG	3 cut(s)	695, 746, 845
RsaI	GTAC	3 cut(s)	955, 1482, 1498
RsaNI	GTAC	3 cut(s)	954, 1481, 1497
RseI	CAYNNNNRTG	4 cut(s)	192, 348, 573, 1383
SalI	GTCGAC	1 cut(s)	454
SaqAI	TTAA	5 cut(s)	20, 971, 1035, 1191, 1373
SatI	GCNGC	6 cut(s)	98, 299, 354, 696, 846, 966
Sau3AI	GATC	7 cut(s)	166, 277, 802, 853, 929, 1168, 1537
SchI	GAGTC	4 cut(s)	97, 722, 1133, 1231
ScrFI	CCNGG	7 cut(s)	399, 644, 723, 733, 1208, 1315, 1398
SduI	GDGCHC	8 cut(s)	149, 189, 345, 429, 825, 868, 1054, 1300
SfaNI	GCATC	8 cut(s)	84, 184, 340, 492, 526, 1089, 1264, 1276
SinI	GGWCC	7 cut(s)	320, 395, 585, 638, 677, 839, 898
SmiMI	CAYNNNNRTG	4 cut(s)	192, 348, 573, 1383
SsiI	CCGC	3 cut(s)	680, 778, 1513
SspMI	CTAG	7 cut(s)	246, 378, 417, 795, 1187, 1293, 1559
StyD4I	CCNGG	7 cut(s)	397, 642, 721, 731, 1206, 1313, 1396
StyI	CCWWGG	5 cut(s)	180, 432, 794, 902, 1266
TaaI	ACNGT	1 cut(s)	1049
TaiI	ACGT	3 cut(s)	919, 955, 1502
TaqI	TCGA	3 cut(s)	224, 455, 924
TaqII	GACCGA	1 cut(s)	68
TatI	WGTACW	1 cut(s)	1480
TfiI	GAWTC	4 cut(s)	406, 623, 1357, 1492
Tru1I	TTAA	5 cut(s)	20, 971, 1035, 1191, 1373
Tru9I	TTAA	5 cut(s)	20, 971, 1035, 1191, 1373
TscAI	CASTG	1 cut(s)	1054
TseFI	GTSAC	1 cut(s)	1132
TseI	GCWGC	6 cut(s)	97, 298, 353, 695, 845, 965
Tsp45I	GTSAC	1 cut(s)	1132
TspDTI	ATGAA	6 cut(s)	227, 247, 248, 419, 576, 1395
TspGWI	ACGGA	3 cut(s)	485, 542, 1173
TspRI	CASTG	1 cut(s)	1054
Tth111I	GACNNNGTC	1 cut(s)	589
VneI	GTGCAC	1 cut(s)	341
VpaK11BI	GGWCC	7 cut(s)	320, 395, 585, 638, 677, 839, 898
VspI	ATTAAT	2 cut(s)	20, 1373
XapI	RAATTY	5 cut(s)	437, 883, 1040, 1522, 1565
XcmI	CCANNNNNNNNNTGG	2 cut(s)	187, 1513
XmaJI	CCTAGG	1 cut(s)	794
XmiI	GTMKAC	1 cut(s)	455
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	7 cut(s)	246, 378, 417, 795, 1187, 1293, 1559
Zsp2I	ATGCAT	3 cut(s)	69, 199, 1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.