FvH4_7g08960

eukaryotic translation initiation factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
8764645 .. 8773832
9188 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08960.t3

Sequence Viewer

Length: 5466 bp
ATGTCCTTCAATCAATCAAGGTCGGATAAGAACGAGACGCAGTATCGTAAAACAGGGCGATCCGCGGCCTCCAATCAGCAGCACAGGGGATACTCACCCGTTTACCCTAAGGGCGCCGGCGCCGCTGGCCCCGCCCCTTCCATCTCCTCCCAACGCAGCTTCAAGAAGACTAATAACAATGCACAAGGAGGGCAATCCAGGGGGAATGTAGCCCCTGTAAATCCTTCGGATCCCGGAAGTGCTTCTACACCGCGGAGCGGTATACCGAATGGCGCCCATGTACAGCCGCAATATCACGGAGCCATGGAGCCAACTGTTACAAACACAGCTCCCAAGCAAACAGAACCATTAGTCGCACAGAGAGGCCCTCGAGCTGTTCCGAAGGCTCCAGCTTCTCAGTCTGCCTCCGTGAATTCTGACTCAAGAGGGCCCAGTACTCCTGTAAAACCCCCAGGGGATGCGTCCAAGGGATTTTCGTTTCAGTTTGGGTCCATAAGTCCTGGTCTGATGAATGGGATGCAGATTCCGGCTCGAACTAGCTCAGCTCCCCCAAATTTGGATGAGCAGAAGCGCGACCAGGCACGGCATGAGTCCTTTAGACCAGCACCGGCATTGCCAACCCCTTCTGTTCCTAAGCAGCAGTTACCTAGGAAAGATCAACATTCTGTCGACCAATCTAGTGCCGCTGAGACTCATCTGCAACCCAAGGCCAAAAAGGATGTGCAAGTGTCACCTGCACCCCCTGCTAGTCAATCTCAGAAACCTTCTGGTCCTCCAATGCCTGGTATCTCTATGGCAATGCCATTTCACCAGCCACAGGTTTCTCTGCAGTTTGGTGGCCCCAACCAGCAGATTCAATCTCAGGGTATGCCTCCCAATTCACTCCAAATGCCAATGCCAATTCCGTTACCAATAGGTAGCAGTCAAGTACAGCAGCCAGTGTTCGTTTCAGGTCTGCAACCCCATCCCATGCAGCCTCCAAATATTATGCATCAGGGCCAGAACCTGGGTTTTACCTCCCAAATGGGTCCACAGCTGCCTCAGTTGGGCAACTTGGGGATCGGCATAGGTCCTCAGTTCCCCCAACAGCAAGGTGGCAAGTTTGCTGCCCCTCGTAAAACCCCTGTCAAGATTACCCATCCAGATACACATGAAGAGTTAAGGCTTGATAAACGGGCAGATTCATATCAAGATGGTGGCTCGTCAGCCGCCAGGACTCACCCGAATGTTTCTCAATCTCAGCCCATGCCTCCATTTGCCGGTTCTCATCCTACAAGCTATTACAATTCTTACAATACGAGCCTGTTTTTTCCATCTCCGAATTCACATCCTTTAACAAGTAGTCACATGCCACCCAATTCACAAGCACCACGATTTAGCTATCCAGTGAGCCAGGGTCCACCCCAAAGTATGCCTTTCATGAATCCGTCAGCTCACCCACCTACCCTGGATCATGCACGGGATGTACATAGTAAAATTGCCTCTGTTCCATCCACAGCTATTCCTGTTACTGTTAAACCAGCTGTTGACTCATCGGCAAACAGTGCAGCTTCTGTTGAAAAAAATGAATTTTCAAAGACATCAAGGCCGGCTGGAGAAGTGATATCATCTCATGCTCAAAGGTTTCCTGGCAGTGACCCATCAATTAATAAATCATTGCCAGTTGTGGCAAAAGTGTCTGCAGCTGTGCCAGCTGCTCCTTCTGTTGAAGGCCAGGTTTCAAGTTCTTTATCCTCTACTTCAGTTGCCTCAGCAGAGGAGTCTGTACCAGTTGTAAATGCCACTGAAGCCAGAAAAAAGGAATCCCTTAGTCGGTCAAACTCAATTAAAGATCAGCAGAAGAAACCAGCCAAGAAAGGGAGTACTCAACCACAGCATCAGCTTCTTGAGCAATCTAGCTCTACATCAAGCGTTCCCTCTCAGGAACATGCTGTTTCTTCTAGTATTGGTGTTTCTCAACCTAAAGAGGGTAATACAGTTCCTGTTTCAGAAAGCATTGGGTCTGTGTCAGAATCAGTCGGGGTATCATCATCAAATGTTAGTTTGGACACTACAGATGTTTCCGACTCAAAGACTGAAACAGTTCAAGAAGGCGCCATCTCCTCTTCTGATGTTGGTCATCATAGTCAAATAGGAAACTCTTCGCTGCTGGATGAACAAGGAAAACAAGAATTGGTTGGAGCAGATAACCAGTCGGAAGGAAGTTTGTCTGAAGGATACAAACAGGAAGCTAGTAGTCCTAGTATTTCTTCAGAATCTACCTCTGTGAAAAGTATGGAATCTGCTAACAAAGCAGCAGAGCACTCTGTCGGAAAGGAAACTGCCAAAGGCAATGTTTTTGGAACTTCTGAAACTGCAGGAGTCAAAGATCACCATGTCGGTTGCAATTCAGAATTAGATGCGATAAATGCCTCTTCAAGAAGAAGTGATAGTGTGGGTAATATTGAAGTTGCTTCTACAGAACTTAGTGGGCCAGATCTGCCCTCTGCTGCTTTTCAATCCACAGATCTGTCAGGTACTACTTCAAAGCAAGAAGGGGAAAGTGTGGATATTACTAGGGGTGGGGGAAGTGTTGAGAATATTGGTAGTGGTGGTGATTCAATTACAGTGTCAGGTTCGAAGGATAAACCCCTCCACGAACTGAGTAGAACTAAGAGTTCTCTTTCAAAGACGAAGAAGAAAAGAAAAGAAATTCTTTCTAAGGCTGATGCTGCTGGGGGAACCTCTGATCTATATGGGGCTTATAAGGACCCTGCAGACAAGAAAGATGTAGCATCATCTGAAAGCAGTGAGAGCACTTCTACTAGCATATTGTCAAAGCAGGAAGCTGCTGATTCTACTCAGCAAGTTGCTGTTGTCAGAGATGAAGGTGCACCGAGTAAAGCTGAGCCAGATGACTGGGAAGATGCTGCTGACATCTCTACTCCCAAACTGGATCCCTCAAATAGTGGAGAACAGGCCCATGGTGACTTAGATGGGAGTGGATATGGGGCAAAGAAGTATTCCAGAGATTTTCTTCTGAAGTTCTCTATGCAGTTTCTTGACCTACCGGAGGGTTTTGAGATTACGTCTGATATATCAGAAATTTTGAATGCCAATGTAAATGCTTTTGCTTCTGTCGATTATGATTCAATCCCAAGTCCTGGACGGATTATTGACAGGCCAGGGGGAGGAAGAATTGACCGACGTGGGAGTGGAATGATTGAAGATGATAGGTGGAACAAAGGTGGTAATGCCAATTTCCGACCTGTCCAAGGAGTAAATTATGGTGTTTTGAGGAGTCCAGGTCCACGGGGACAAGCTCAGCATGTTAGAGGGATCCTACCTGGGCCGATTGCAGGTTCACAGGGAGGGATGCAAAGAAATAACCCTGATGCTGACAGGTGGCAGCGAGCTACAAACTTTCAACCAAAGGGTTTGATGCCTTCACCACAGACTCCATTACAGGTGATGCACAAAGCTGAGAGGAAGTATGAAGTCGGTAAAGTCAGTGATGAAGAACAGGCTAAGCAAAGGCAGTTGAAGGCAATATTAAACAAGCTGACTCCCCAGAATTTTGAAAAACTGTTTGAGCAAGTAAAAGCTGTAAATATTGATAATGCCACAACACTGACAGGTGTAATCTCACAAATCTTTGATAAGGCTCTAATGGAGCCTACTTTCTGTGAGATGTATGCGAACTTCTGCTTTTATCTTGCCGCAGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACCTTTAAGAGGTTGCTTTTGAATAAGTGTCAGGAGGAATTTGAGAGGGGAGAAAGAGAACAAGAGGAAGCCAATAAGGCTGATGAGGAGGGTGAGGTGAAACAATCTGAAGAAGAAAGAGAAGAGAAAAGAATTAAAGCACGGAGACGAATGTTGGGTAATATTAGATTAATTGGGGAGTTATACAAGAAGAAAATGTTGACTGAGAGAATAATGCATGAGTGCATTAAGAAGTTGTTAGGTCAGCAGCAGACTCCAGATGAGGAGGATATTGAAGCTTTGTGCAAACTAATGAGCACAATTGGGGAGATGATTGATCATTCGAAAGCCAAGGAGCACATGGATGCATATTTTGAGAGGGTGAAAAGTTTATCGAATAATAAGAATTTATCATCTAGGGTCAGGTTTATGTTGAAAGATACCATAGACTTGCGAAAGAACAGATGGCAGCAGAGGAGGAAAGTTGAAGGACCGAAAAAGATTGAGGAAGTGCACAGAGATGCTGCGCAAGAACGACAGGCACAAGCTAGTAGGCTGAGCCGTGGTCCAGGAATGAATCCATCAGCGAGAAGGGGGCCTCCCATGGAATTTAGTCCTAGAGGGTCGACTGTGGTATCTCCATCAAATGCACAAATTGGTGGGTTCCGTGGGATGCCCTCCCCAGCTCGTGGTTTTGGCAGTCAGGACGCCCGTACAGATGTCCGTGTAGATGAAAGACATTCTTATGAGGGTAGGACCCCAGTTCCCTTGACTCAAAGACCCATGGGTGATGAGTCCATCACTTTGGGTCCCCAGGGTGGTCTTGCCAGAGGAATGTCTGTCAGAGGACCACCATCGATGTCGGCTGCTCCACTCCCTGAGTTATCTCATAACCCTGGAGACTCCAGGAGGATGACAACTGGTTTGAATGGTTTCAGTTCCCACTCAGAGCGGGCAACTTACAACCCCAGGGAGGATTTAATACTGAGAATTGTGCCTGATAGATTTGGAGGTCCTGCTGCTTATGATCAGTCAAGTGGACCAGAGCGTAATATAAGTTTTGGTGGGAGGGATCCACGGAGTTCAGATCGTAGTTTTGATAGATCTCTTACTGCACCGCCTACTCGCTCACATGGGGCAGCTTTAACACAAAATGTTCCTTCAGATATGTCGGAAGAATATCTTAGAGATAAGTCGTTGGGAGCAATTAAGGAATTTTACAGCGCCCGAGACGAGAAGGAAGTTGCTCTATGCATCAAAGACTTGAACTCACCAAGCTTCCATCCGACAATGATATCTCTTTGGGTCACAGACTCATTTGAGAGGAAGGACAGAGAAAGAGATCTCTTCACAAAGCTTCTAATTAATCTTACCAAGTCCCAGGATGGATCTTTGAGTCAATCCCATCTCATCAAAGGGTTTGAAGCTACTCTCTCCACCTTGGAGGATGCCGTGACTGATGCACCTAGAGCACCAGAGTTTCTTGCCCGGATATTTGCCAGAGCCATTTTAGAAAATGTAGTTTCCTTGAATCAGATTGGGCAGTTAATACGTGAAGGTGGAGAGGAGCCAGGAAGTCTTTTGGAAGCAGGGCTTGCAGGCAATGTTCTTGGAAATATCTTGGAGATTATCCAATCAGAAAAAGGAGAGAGTGGTCTCAATGAGATTCGTACGTCCTCCAACTTGCGGTTGGAGAATTTCCGGCCTCCAGATCCTCTCAAGTCAAGGATGCTAGAGAAATTTCTTTAG

Protein Analysis

1822

Amino Acids

196.4

Weight (kDa)

7.15

Isoelectric Point (pI)

59.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 1071 - 1292 8.4e-53 MIF4G domain
MA3 PF02847 1534 - 1645 9.3e-16 MA3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2745
AarI CACCTGC 1 cut(s) 742
Acc16I TGCGCA 1 cut(s) 4245
Acc36I ACCTGC 2 cut(s) 742, 3329
AccB1I GGYRCC 4 cut(s) 113, 119, 272, 2093
AccB7I CCANNNNNTGG 4 cut(s) 782, 1006, 3143, 4406
AccBSI CCGCTC 2 cut(s) 258, 4669
AccI GTMKAC 3 cut(s) 262, 669, 4343
AccII CGCG 3 cut(s) 65, 253, 573
AcuI CTGAAG 7 cut(s) 1725, 1806, 2232, 2235, 3041, 3867, 4863
AcyI GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
AfaI GTAC 9 cut(s) 282, 436, 930, 1467, 1767, 1864, 2518, 4432, 5389
AjiI CACGTC 1 cut(s) 3188
Alw21I GWGCWC 7 cut(s) 2304, 2798, 2875, 4037, 4077, 4233, 5191
Alw26I GTCTC 6 cut(s) 29, 683, 3877, 4611, 4941, 5378
Alw44I GTGCAC 2 cut(s) 2871, 4229
AlwNI CAGNNNCTG 3 cut(s) 1006, 1553, 1982
Ama87I CYCGRG 2 cut(s) 369, 4944
ApaI GGGCCC 1 cut(s) 432
ApaLI GTGCAC 2 cut(s) 2871, 4229
ArsI GACNNNNNNTTYG 2 cut(s) 4624, 4656
AseI ATTAAT 3 cut(s) 1647, 3908, 5082
Asp700I GAANNNNTTC 4 cut(s) 241, 2082, 2140, 4649
AspA2I CCTAGG 1 cut(s) 647
AspLEI GCGC 7 cut(s) 116, 122, 275, 573, 2096, 4246, 4943
AsuC2I CCSGG 2 cut(s) 234, 5206
AsuII TTCGAA 2 cut(s) 2618, 4061
AvaI CYCGRG 2 cut(s) 369, 4944
AvrII CCTAGG 1 cut(s) 647
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 3 cut(s) 432, 2875, 4233
BaeI ACNNNNGTAYC 2 cut(s) 4335, 4368
BamHI GGATCC 4 cut(s) 229, 2935, 3318, 4789
BanI GGYRCC 4 cut(s) 113, 119, 272, 2093
BanII GRGCYC 1 cut(s) 432
BarI GAAGNNNNNNTAC 4 cut(s) 229, 261, 3665, 3697
BauI CACGAG 1 cut(s) 4404
BbsI GAAGAC 2 cut(s) 173, 3729
Bbv12I GWGCWC 7 cut(s) 2304, 2798, 2875, 4037, 4077, 4233, 5191
BbvCI CCTCAGC 1 cut(s) 1750
BceAI ACGGC 3 cut(s) 599, 4263, 5153
BciVI GTATCC 2 cut(s) 83, 2210
BclI TGATCA 2 cut(s) 4054, 4744
BcnI CCSGG 2 cut(s) 234, 5206
BcoDI GTCTC 6 cut(s) 29, 683, 3877, 4611, 4941, 5378
BfmI CTRYAG 6 cut(s) 827, 1680, 2052, 2355, 2457, 2754
BfoI RGCGCY 5 cut(s) 117, 123, 276, 2097, 4944
BfuAI ACCTGC 2 cut(s) 742, 3329
BfuI GTATCC 2 cut(s) 83, 2210
BglI GCCNNNNNGGC 1 cut(s) 3815
BglII AGATCT 4 cut(s) 2476, 2506, 4820, 5059
BlnI CCTAGG 1 cut(s) 647
BlpI GCTNAGC 5 cut(s) 541, 2886, 3303, 3507, 4274
BmcAI AGTACT 2 cut(s) 436, 1864
BmeT110I CYCGRG 2 cut(s) 369, 4944
BmgBI CACGTC 1 cut(s) 3188
BmrI ACTGGG 3 cut(s) 426, 2908, 4472
BmuI ACTGGG 3 cut(s) 426, 2908, 4472
BpiI GAAGAC 2 cut(s) 173, 3729
BplI GAGNNNNNCTC 2 cut(s) 352, 384
BpmI CTGGAG 6 cut(s) 372, 1614, 3978, 4606, 4635, 5409
Bpu10I CCTNAGC 2 cut(s) 633, 1750
Bpu1102I GCTNAGC 5 cut(s) 541, 2886, 3303, 3507, 4274
Bpu14I TTCGAA 2 cut(s) 2618, 4061
BpuEI CTTGAG 3 cut(s) 406, 1907, 5420
BpuMI CCSGG 2 cut(s) 234, 5206
Bsa29I ATCGAT 1 cut(s) 4574
BsaAI YACGTR 1 cut(s) 5270
BsaBI GATNNNNATC 1 cut(s) 1185
BsaHI GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
BsaI GGTCTC 1 cut(s) 5378
BsaWI WCCGGW 1 cut(s) 3049
BsaXI ACNNNNNCTCC 2 cut(s) 3271, 3301
Bse118I RCCGGY 4 cut(s) 116, 607, 1259, 1588
Bse21I CCTNAGG 1 cut(s) 108
Bse3DI GCAATG 5 cut(s) 611, 804, 1655, 2338, 5326
Bse8I GATNNNNATC 1 cut(s) 1185
BseCI ATCGAT 1 cut(s) 4574
BseJI GATNNNNATC 1 cut(s) 1185
BseMI GCAATG 5 cut(s) 611, 804, 1655, 2338, 5326
BseRI GAGGAG 8 cut(s) 136, 1772, 2092, 3292, 3839, 4016, 4207, 5297
BseSI GKGCMC 3 cut(s) 432, 2875, 4233
BseYI CCCAGC 2 cut(s) 2714, 4399
BsgI GTGCAG 3 cut(s) 720, 1566, 4815
Bsh1236I CGCG 3 cut(s) 65, 253, 573
BshNI GGYRCC 4 cut(s) 113, 119, 272, 2093
BshVI ATCGAT 1 cut(s) 4574
BsiHKAI GWGCWC 7 cut(s) 2304, 2798, 2875, 4037, 4077, 4233, 5191
BsiHKCI CYCGRG 2 cut(s) 369, 4944
BsiSI CCGG 9 cut(s) 117, 234, 527, 608, 1260, 1589, 3050, 5206, 5419
BsiWI CGTACG 1 cut(s) 5387
BslFI GGGAC 3 cut(s) 3309, 4512, 5080
BsmAI GTCTC 6 cut(s) 29, 683, 3877, 4611, 4941, 5378
BsmBI CGTCTC 3 cut(s) 29, 3877, 4941
BsmFI GGGAC 3 cut(s) 3309, 4512, 5080
BsmI GAATGC 1 cut(s) 3097
Bso31I GGTCTC 1 cut(s) 5378
BsoBI CYCGRG 2 cut(s) 369, 4944
Bsp119I TTCGAA 2 cut(s) 2618, 4061
Bsp120I GGGCCC 1 cut(s) 428
Bsp1286I GDGCHC 8 cut(s) 432, 2304, 2798, 2875, 4037, 4077, 4233, 5191
Bsp1407I TGTACA 2 cut(s) 280, 1465
Bsp1720I GCTNAGC 5 cut(s) 541, 2886, 3303, 3507, 4274
Bsp19I CCATGG 4 cut(s) 303, 2962, 4320, 4500
BspDI ATCGAT 1 cut(s) 4574
BspFNI CGCG 3 cut(s) 65, 253, 573
BspHI TCATGA 1 cut(s) 1419
BspMAI CTGCAG 4 cut(s) 831, 1684, 2359, 2758
BspMI ACCTGC 2 cut(s) 742, 3329
BspT104I TTCGAA 2 cut(s) 2618, 4061
BspT107I GGYRCC 4 cut(s) 113, 119, 272, 2093
BspTNI GGTCTC 1 cut(s) 5378
BsrBI CCGCTC 2 cut(s) 258, 4669
BsrDI GCAATG 5 cut(s) 611, 804, 1655, 2338, 5326
BsrFI RCCGGY 4 cut(s) 116, 607, 1259, 1588
BsrGI TGTACA 2 cut(s) 280, 1465
BssAI RCCGGY 4 cut(s) 116, 607, 1259, 1588
BssNAI GTATAC 1 cut(s) 263
BssNI GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
BssSI CACGAG 1 cut(s) 4404
Bst1107I GTATAC 1 cut(s) 263
Bst2BI CACGAG 1 cut(s) 4404
Bst4CI ACNGT 8 cut(s) 316, 1513, 1544, 1978, 2083, 2608, 3567, 4348
Bst6I CTCTTC 6 cut(s) 1149, 2110, 2146, 2419, 3855, 5069
BstACI GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
BstAPI GCANNNNNTGC 3 cut(s) 743, 1544, 5312
BstAUI TGTACA 2 cut(s) 280, 1465
BstBAI YACGTR 1 cut(s) 5270
BstBI TTCGAA 2 cut(s) 2618, 4061
BstC8I GCNNGC 8 cut(s) 118, 127, 1590, 1692, 3393, 4671, 5313, 5317
BstENI CCTNNNNNAGG 3 cut(s) 3050, 3252, 3745
BstFNI CGCG 3 cut(s) 65, 253, 573
BstH2I RGCGCY 5 cut(s) 117, 123, 276, 2097, 4944
BstHHI GCGC 7 cut(s) 116, 122, 275, 573, 2096, 4246, 4943
BstMAI GTCTC 6 cut(s) 29, 683, 3877, 4611, 4941, 5378
BstNSI RCATGY 3 cut(s) 1351, 1931, 3311
BstSFI CTRYAG 6 cut(s) 827, 1680, 2052, 2355, 2457, 2754
BstSLI GKGCMC 3 cut(s) 432, 2875, 4233
BstUI CGCG 3 cut(s) 65, 253, 573
BstV2I GAAGAC 2 cut(s) 173, 3729
BstXI CCANNNNNNTGG 2 cut(s) 2898, 4522
BstZ17I GTATAC 1 cut(s) 263
Bsu15I ATCGAT 1 cut(s) 4574
Bsu36I CCTNAGG 1 cut(s) 108
BsuI GTATCC 2 cut(s) 83, 2210
BsuTUI ATCGAT 1 cut(s) 4574
BtrI CACGTC 1 cut(s) 3188
BtsI GCAGTG 2 cut(s) 1639, 2794
BveI ACCTGC 2 cut(s) 742, 3329
Cac8I GCNNGC 8 cut(s) 118, 127, 1590, 1692, 3393, 4671, 5313, 5317
CaiI CAGNNNCTG 3 cut(s) 1006, 1553, 1982
CciI TCATGA 1 cut(s) 1419
CfoI GCGC 7 cut(s) 116, 122, 275, 573, 2096, 4246, 4943
Cfr10I RCCGGY 4 cut(s) 116, 607, 1259, 1588
Cfr42I CCGCGG 2 cut(s) 66, 254
ClaI ATCGAT 1 cut(s) 4574
CseI GACGC 3 cut(s) 46, 450, 4433
Csp6I GTAC 9 cut(s) 281, 435, 929, 1466, 1766, 1863, 2517, 4431, 5388
CviQI GTAC 9 cut(s) 281, 435, 929, 1466, 1766, 1863, 2517, 4431, 5388
DinI GGCGCC 4 cut(s) 115, 121, 274, 2095
Eam1104I CTCTTC 6 cut(s) 1149, 2110, 2146, 2419, 3855, 5069
EarI CTCTTC 6 cut(s) 1149, 2110, 2146, 2419, 3855, 5069
Eco24I GRGCYC 1 cut(s) 432
Eco31I GGTCTC 1 cut(s) 5378
Eco32I GATATC 2 cut(s) 1605, 5013
Eco57I CTGAAG 7 cut(s) 1725, 1806, 2232, 2235, 3041, 3867, 4863
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 2 cut(s) 369, 4944
EcoNI CCTNNNNNAGG 3 cut(s) 3050, 3252, 3745
EcoO109I RGGNCCY 8 cut(s) 365, 428, 1070, 2749, 4313, 4473, 4526, 4730
EcoRI GAATTC 2 cut(s) 412, 1321
EcoRV GATATC 2 cut(s) 1605, 5013
EcoT22I ATGCAT 4 cut(s) 993, 3957, 4087, 4973
EcoT38I GRGCYC 1 cut(s) 432
EgeI GGCGCC 4 cut(s) 115, 121, 274, 2095
EheI GGCGCC 4 cut(s) 115, 121, 274, 2095
Esp3I CGTCTC 3 cut(s) 29, 3877, 4941
FaqI GGGAC 3 cut(s) 3309, 4512, 5080
FauI CCCGC 2 cut(s) 139, 4662
FbaI TGATCA 2 cut(s) 4054, 4744
FblI GTMKAC 3 cut(s) 262, 669, 4343
FriOI GRGCYC 1 cut(s) 432
FspI TGCGCA 1 cut(s) 4245
GlaI GCGC 7 cut(s) 115, 121, 274, 572, 2095, 4245, 4942
GsaI CCCAGC 2 cut(s) 2718, 4403
GsuI CTGGAG 6 cut(s) 372, 1614, 3978, 4606, 4635, 5409
HaeII RGCGCY 5 cut(s) 117, 123, 276, 2097, 4944
HapII CCGG 9 cut(s) 117, 234, 527, 608, 1260, 1589, 3050, 5206, 5419
HgaI GACGC 3 cut(s) 46, 450, 4433
HhaI GCGC 7 cut(s) 116, 122, 275, 573, 2096, 4246, 4943
Hin1I GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
Hin6I GCGC 7 cut(s) 114, 120, 273, 571, 2094, 4244, 4941
HinP1I GCGC 7 cut(s) 114, 120, 273, 571, 2094, 4244, 4941
HincII GTYRAC 4 cut(s) 670, 1528, 3939, 4344
HindII GTYRAC 4 cut(s) 670, 1528, 3939, 4344
HindIII AAGCTT 3 cut(s) 4014, 4993, 5072
HpaII CCGG 9 cut(s) 117, 234, 527, 608, 1260, 1589, 3050, 5206, 5419
Hpy99I CGWCG 1 cut(s) 3189
HpyCH4III ACNGT 8 cut(s) 316, 1513, 1544, 1978, 2083, 2608, 3567, 4348
HpyCH4IV ACGT 4 cut(s) 3068, 3187, 5269, 5390
HpySE526I ACGT 4 cut(s) 3068, 3187, 5269, 5390
Hsp92I GRCGYC 5 cut(s) 114, 120, 273, 2094, 4425
HspAI GCGC 7 cut(s) 114, 120, 273, 571, 2094, 4244, 4941
KasI GGCGCC 4 cut(s) 113, 119, 272, 2093
KflI GGGWCCC 1 cut(s) 4526
KroI GCCGGC 2 cut(s) 116, 1588
KroNI GCCGGC 2 cut(s) 118, 1590
Ksp22I TGATCA 2 cut(s) 4054, 4744
KspI CCGCGG 2 cut(s) 66, 254
MaeII ACGT 4 cut(s) 3068, 3187, 5269, 5390
MbiI CCGCTC 2 cut(s) 258, 4669
MfeI CAATTG 1 cut(s) 4038
MhlI GDGCHC 8 cut(s) 432, 2304, 2798, 2875, 4037, 4077, 4233, 5191
Mly113I GGCGCC 4 cut(s) 114, 120, 273, 2094
MmeI TCCRAC 9 cut(s) 2088, 2158, 2175, 2290, 3268, 4869, 5027, 5388, 5421
Mph1103I ATGCAT 4 cut(s) 993, 3957, 4087, 4973
MreI CGCCGGCG 1 cut(s) 116
MroNI GCCGGC 2 cut(s) 116, 1588
MroXI GAANNNNTTC 4 cut(s) 241, 2082, 2140, 4649
MslI CAYNNNNRTG 4 cut(s) 1224, 4080, 4236, 4461
MspA1I CMGCKG 8 cut(s) 65, 125, 253, 686, 1036, 1523, 1685, 1694
MspI CCGG 9 cut(s) 117, 234, 527, 608, 1260, 1589, 3050, 5206, 5419
MunI CAATTG 1 cut(s) 4038
Mva1269I GAATGC 1 cut(s) 3097
MvnI CGCG 3 cut(s) 65, 253, 573
NaeI GCCGGC 2 cut(s) 118, 1590
NarI GGCGCC 4 cut(s) 114, 120, 273, 2094
NciI CCSGG 2 cut(s) 234, 5206
NcoI CCATGG 4 cut(s) 303, 2962, 4320, 4500
NgoMIV GCCGGC 2 cut(s) 116, 1588
NmuCI GTSAC 6 cut(s) 729, 1343, 1634, 2966, 5023, 5170
NsbI TGCGCA 1 cut(s) 4245
NsiI ATGCAT 4 cut(s) 993, 3957, 4087, 4973
NspI RCATGY 3 cut(s) 1351, 1931, 3311
NspV TTCGAA 2 cut(s) 2618, 4061
PaeR7I CTCGAG 1 cut(s) 369
PagI TCATGA 1 cut(s) 1419
PaqCI CACCTGC 1 cut(s) 742
PasI CCCWGGG 3 cut(s) 452, 4531, 4686
PctI GAATGC 1 cut(s) 3097
PdiI GCCGGC 2 cut(s) 118, 1590
PdmI GAANNNNTTC 4 cut(s) 241, 2082, 2140, 4649
Pfl23II CGTACG 1 cut(s) 5387
PflMI CCANNNNNTGG 4 cut(s) 782, 1006, 3143, 4406
PfoI TCCNGGA 4 cut(s) 232, 3142, 4285, 4622
PluTI GGCGCC 4 cut(s) 117, 123, 276, 2097
Ppu21I YACGTR 1 cut(s) 5270
PpuMI RGGWCCY 5 cut(s) 1070, 2749, 4473, 4526, 4730
PshBI ATTAAT 3 cut(s) 1647, 3908, 5082
PsiI TTATAA 1 cut(s) 2745
Psp5II RGGWCCY 5 cut(s) 1070, 2749, 4473, 4526, 4730
PspFI CCCAGC 2 cut(s) 2714, 4399
PspLI CGTACG 1 cut(s) 5387
PspOMI GGGCCC 1 cut(s) 428
PspPPI RGGWCCY 5 cut(s) 1070, 2749, 4473, 4526, 4730
PspXI VCTCGAGB 1 cut(s) 369
PstI CTGCAG 4 cut(s) 831, 1684, 2359, 2758
PstNI CAGNNNCTG 3 cut(s) 1006, 1553, 1982
PvuII CAGCTG 4 cut(s) 1036, 1523, 1685, 1694
RsaI GTAC 9 cut(s) 282, 436, 930, 1467, 1767, 1864, 2518, 4432, 5389
RsaNI GTAC 9 cut(s) 281, 435, 929, 1466, 1766, 1863, 2517, 4431, 5388
RseI CAYNNNNRTG 4 cut(s) 1224, 4080, 4236, 4461
SacII CCGCGG 2 cut(s) 66, 254
SalI GTCGAC 2 cut(s) 668, 4342
ScaI AGTACT 2 cut(s) 436, 1864
SduI GDGCHC 8 cut(s) 432, 2304, 2798, 2875, 4037, 4077, 4233, 5191
SfcI CTRYAG 6 cut(s) 827, 1680, 2052, 2355, 2457, 2754
SfoI GGCGCC 4 cut(s) 115, 121, 274, 2095
Sfr274I CTCGAG 1 cut(s) 369
Sfr303I CCGCGG 2 cut(s) 66, 254
SfuI TTCGAA 2 cut(s) 2618, 4061
SgrAI CRCCGGYG 1 cut(s) 116
SgrBI CCGCGG 2 cut(s) 66, 254
SlaI CTCGAG 1 cut(s) 369
SmiMI CAYNNNNRTG 4 cut(s) 1224, 4080, 4236, 4461
SmlI CTYRAG 4 cut(s) 369, 421, 1886, 5435
SmoI CTYRAG 4 cut(s) 369, 421, 1886, 5435
SspDI GGCGCC 4 cut(s) 113, 119, 272, 2093
SspI AATATT 6 cut(s) 985, 2443, 2581, 3531, 3592, 3901
TaaI ACNGT 8 cut(s) 316, 1513, 1544, 1978, 2083, 2608, 3567, 4348
TaiI ACGT 4 cut(s) 3071, 3190, 5272, 5393
TaqI TCGA 9 cut(s) 370, 532, 669, 2618, 3120, 4061, 4112, 4343, 4574
TaqII GACCGA 3 cut(s) 1803, 3198, 4225
TatI WGTACW 5 cut(s) 280, 434, 928, 1465, 1862
TauI GCSGC 6 cut(s) 68, 125, 289, 686, 1211, 3701
TseFI GTSAC 6 cut(s) 729, 1343, 1634, 2966, 5023, 5170
Tsp45I GTSAC 6 cut(s) 729, 1343, 1634, 2966, 5023, 5170
TspGWI ACGGA 9 cut(s) 312, 397, 894, 1416, 3163, 3895, 4373, 4430, 4810
Van91I CCANNNNNTGG 4 cut(s) 782, 1006, 3143, 4406
VneI GTGCAC 2 cut(s) 2871, 4229
VspI ATTAAT 3 cut(s) 1647, 3908, 5082
XagI CCTNNNNNAGG 3 cut(s) 3050, 3252, 3745
XceI RCATGY 3 cut(s) 1351, 1931, 3311
XcmI CCANNNNNNNNNTGG 3 cut(s) 1091, 4075, 5404
XhoI CTCGAG 1 cut(s) 369
XmaJI CCTAGG 1 cut(s) 647
XmiI GTMKAC 3 cut(s) 262, 669, 4343
XmnI GAANNNNTTC 4 cut(s) 241, 2082, 2140, 4649
ZrmI AGTACT 2 cut(s) 436, 1864
Zsp2I ATGCAT 4 cut(s) 993, 3957, 4087, 4973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.