AT4G01860

Transducin family protein WD-40 repeat family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
801032 .. 808087
7056 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01860.1

Sequence Viewer

Length: 3927 bp
ATGGCGGAAGAAAACAGCCGCCGGAAGTGGAACCCTCACGCCGGTCCATATCTAGGAGAAGTCTCTTCTCTAGCTTTCCTCAATCTTCCTCAACATGTTTCTTCAATTCCTTATCTTCTCGCCGGTTCCGGTTCGGAGATTCTGCTTTACGATTTGAGTTCCGGGGAATTGATTCGATCGTTTCAAGTGTTTGAGGGAGTTCGCGTCCATGGAACTGTTTGTAGCAAAAGCTTTGTTCATTCGGCGGAAAGATATACGTATAAACTTGTAATATTTGGAGAGAAGAAAGTGAAGATCTTTTCATTGATTGTTGAATTAGCTTCGAGCTCTGGTGAAATCTCCGTGAATTTGGAAAATTTTGAATCTTTGCCTAGGCTTAGCAATTGGGTCTTCGACGTTTGTTTCTTACAGGACTCTACTGGTTCGTTGGAAGAAGAAGATAAGCTTCTAGCTATTGGTTGTAGTGATAATTCCCTCAGCATTTGGGATGTTAAAGAATCACGCATGGCTTTTGAAATTCAGTCACCAGAAAGGTGTCTACTGTATACTATGCGGTTATGGGGCGACAGTATTTCGACTCTCCGTATTGCTTCCGGCACTATTTTCAATGAGATCATTGTTTGGAGGGCAGTTGGCCTTGATGGTGACAATGTCGACCATGGGCATTATTCTGCTTCCCATATGCTTAGACTTACTGGACATGAGGGTTCAATATTTCGCATTGTCTGGTCTTTGGATGGATCAAAAATAGTCTCCGTCTCTGATGATCGTAGTGCTAGGATATGGGAAATTGACTCGCAGGAGGTCGTTGGCCCTGTGCTGTTTGGTCACAGTGTTAGGGTTTGGGACTGCTGCATCTCAGATTCTTTGATTGTCACTGCTGGTGAGGACTGTACATGCCGTGTCTGGGGCGTGGATGGTACCCAGCTGGAAGTGATAAAAGAACATATTGGAAGAGGCATATGGAGATGTTTGTATGATCCGAACTCATCCCTTCTTGTTACTGCTGGATTTGACTCTGCAATCAAAGTACATCAATTGCATAATCGTGGGTCTGAAACATCGTTAGATGCTGTAGGAGTGCTTAATTCACCAGATAAATTGGAATATTTTTCAACCTGTCTCCCAAATTCAACGAAGCATACTGGTCTAACGGACAGCAAGAGTGAGTATGTACGTTGCTTGCAGTTCACACAGGAAGATACCATTTATGTGGCCACAAACCATGGTTGCTTGTACCACGCAAGGTTATTGTCATCTGGAAATGTAAGGTGGACTGAATTAGTTCGCATACCTGAAGAAGGGCCTATTATTACCATGGATGTCATGTCTGGTGGAAAGGTACGCGAGTCTTGTGCATTAGACGATTGGGTTGCTCTTGGAGATGGCAAAGGAAATATGACAATTGTTCGGGTTATTGGTGATATGTATAACCCACATGCTGGCTTGAATCAAAGTTGGAAGGCTAGCCCAGAGAGACAACTTCTAGGGGCATTCTGGTGCAAATCATTAGGCTATAGGTTTGTTTTTTCTTGCAATCCTAGAGGACTCTTGAAGCTATGGAAACTATCCGGTTCTTTAGAATCTGCTGCTGAAACTTATGATGTCTCCCTCTTGGCTGAATTCTCCTCTGGTTTTGGAAAGCGAATAATGTGTGTTGACGCATCAGTAGAGGATGAGGTGATTCTGTGTGGAGATTTACGTGGCAATATCACACTCTTTCCTCTGACAAAGGACATGCTGCACGGAGTTTCTGTTTCTTCAGAATTGAAGATACCATCACTAAAATATTTCAAAGGTGCCCATGGGATTTCAACTGTTTCCAGTCTTTCAGTTGCTAGATTAACTTCGAACAAAGCTGAAATATGCTCGACTGGAGCAGATGGTTGCATATGCTATTTCGAATATGACAGAGAGATGCAGACTTTAGAGTTCATGGGTTTGAAACAACTGAAAGAATTGAACTTAGTTCAATCTGTTTGTCAAGGGGTGCAATTTTCCGAAGACCATCCAAACAATGACTATGCAGCCGGATTTGCGTCAACAGATTTCATACTGTGGAATTTAACAGCTGAAACAAAGGTTACACAAATCTCATGTGGTGGCTGGCGCCGACCCCATTCCTTTTATCTCGGGGAAATCCCTGAGTGGCAAAACTGTTTTGCATATGTGAAGGATGATGTCATTCATATTCATAGACACTGGGTTGGAGGACAGAAGACCAAAGTCTTTCCTCTAAATTTGCATACACAGTTTCATGGCAGAGAATTGCATTCCTTATGCTTCATCTCTACAGATACAAAAGCGGGATTCGATTCTGAAGAAAGTAAAATATCTGATCGGTCTAGTTGGATTGCAACAGGGTGTGAAGATGGATCTGTGAGATTGAGTAGGTATGCATCTGAGTTTGGAAATTGGTCAACATCAGAGCTTTTAGGAGAACATGTTGGAGGCTCAGCTGTGAGATCAGTTTGCTGCGTATCAAATATGCACATGATGTCTTCGGACGTACCTAACTTACCAGACATGTGCGATCAAGACTATGCAGTGGATGATTGCGAAAGTCCTCGCTTACTGATTTCTGTTGGAGCCAAGCGTGTTGTAACCTCTTGGCTCCTAAGGAATGGTAGACACAAGAAAAAGGGAGAATCTTGTATTAGTGATAATGGACACAATAGAGCGTCATCGGAAGTGTCTCCAGTGACGTTCCAATGGCTTGCTACTGACATGCCCACCAAATATCGTCCTTGTGGAAAGATCGAGAAATCTCCAAAACTGGAAGGAGTTGAAGAAGATACTTCTGCCAACGTCACAAAGTTAGGATCTAATACGTATAATGAGCGAGAAAACTATGAAGATGACTGGAGATACATGGCTGCCACTGCATTTCTTGTCAAATGTGTTGGTTCTAGGCTAACTATCTGTTTTATCGCGGTGGCTTGTTCTGATGCCACCCTTACCTTACGTGCTCTAGTCTTGCCACATAGATTATGGTTTGATGTTGCATCCTTGGTTCCTCTAAAATCTCCAGTTTTGTCATTACAACACGCCGTTGTGCCTCTGGATCCCCCTCATGAAGGTAATACACCATATAGTGATGTTTATCTGCTCATCAGTGGGGCCACAGATGGAAGCATAGGCTTTTGGGATGTAACTAAATGTGTAGAAGCTTTTGTAAAGCAAGTATCTAGCATCCATATTGAGAAGTACATTGATTGTCAGTTACGACCACGGACTGGAAGAGGAAGTCAAGGTGGTAGGAAATGGAAACTGTTAGGCTCCAAAATTTCTAAGAGAGCCCAAGAGAACAGCAACTCAGTTGGTGAAGCTGCAGAAGAAGATCCAGCCTCGTCTTTGGAACTCACAAATGACCATCCTCAGGAAAATGGTAAAAACGAAGATGCAGATTCTCTTCCCGAGACAAGCGAGATAAAGACTTCACATGTTGTGAAGAATGCTCATCAATCTGGAGTTAATTGCCTTCATGTTTCTCGCTCAAACAGTTCTCCGAGTTATGGCAATGGTTTGATGTTCAATGTGATTAGCGGGGGTGATGATCAAGCCCTTCATTGTCTTAGCTTCAACATCCTCAGTAGTAGTAATAATCGAGCCACAATATCTGAAATCATGGATCTAAACCAAACCCCAAGTTACAGAATCATGCTCACAGACCGTGGAGGTATTGCATCAGCTCATAGCTCTGCCATCAAAGGCGTGTGGATGGACACGAACTGGGTGTTCTCGACAGGTCTTGATCAACGTGTTCGATGTTGGTTTCTCGAAAAAGATGGTAAACTGATCGAGCACGCTCATATAGTCATCAGCGTGCCCGAGCCAGAGGCACTAGATGCTAAAGCCATTGATGAAAACCGATACCAAATAGCTGTTGCGGGACGCGGGATCCAAATGGTTGAATTCTCCGGTTAA

Protein Analysis

1308

Amino Acids

144.75

Weight (kDa)

5.61

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 145 - 304 1.3e-14 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 145 - 339 7.1e-08 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 146 - 343 3.8e-06 WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 147 - 306 8.6e-06 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 225 - 349 1.1e-14 WDR5 beta-propeller domain
WDR55 PF24796 226 - 353 5.8e-06 WDR55
Beta-prop_WDR3_1st PF25173 228 - 346 4.1e-12 WDR3 first beta-propeller domain
EIF3I PF24805 229 - 316 4.4e-07 EIF3I
Beta-prop_THOC3 PF25174 234 - 349 1.1e-11 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 920
AccB1I GGYRCC 3 cut(s) 920, 1799, 2109
AccB7I CCANNNNNTGG 2 cut(s) 1442, 3236
AccI GTMKAC 4 cut(s) 538, 545, 654, 2629
AccII CGCG 4 cut(s) 204, 1347, 2933, 3897
AciI CCGC 9 cut(s) 5, 19, 245, 553, 2306, 2933, 3546, 3890, 3897
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 9 cut(s) 346, 355, 516, 1129, 1622, 2062, 2239, 3285, 3914
AcuI CTGAAG 3 cut(s) 1317, 1746, 2340
AcyI GRCGYC 1 cut(s) 2110
AfaI GTAC 8 cut(s) 895, 922, 1032, 1176, 1238, 1344, 2511, 3209
AfiI CCNNNNNNNGG 9 cut(s) 41, 53, 907, 1301, 1442, 3077, 3236, 3379, 3515
AflIII ACRYGT 5 cut(s) 94, 2443, 2526, 3442, 3760
Alw21I GWGCWC 3 cut(s) 329, 2971, 3807
Alw26I GTCTC 8 cut(s) 67, 757, 763, 1127, 1471, 1612, 2700, 3413
Ama87I CYCGRG 3 cut(s) 2132, 3416, 3830
AoxI GGCC 5 cut(s) 634, 811, 1215, 1304, 3120
ApeKI GCWGC 7 cut(s) 852, 1589, 1741, 2027, 2475, 2876, 3329
ApoI RAATTY 9 cut(s) 346, 355, 516, 1129, 1622, 2062, 2239, 3285, 3914
Asp700I GAANNNNTTC 2 cut(s) 171, 1284
Asp718I GGTACC 1 cut(s) 920
AspA2I CCTAGG 1 cut(s) 371
AspLEI GCGC 1 cut(s) 2112
AspS9I GGNCC 4 cut(s) 44, 812, 1304, 3120
AsuC2I CCSGG 1 cut(s) 163
AsuHPI GGTGA 9 cut(s) 344, 516, 656, 896, 1083, 1433, 1693, 3335, 3563
AsuII TTCGAA 2 cut(s) 1850, 1902
AsuNHI GCTAGC 1 cut(s) 1466
AvaI CYCGRG 3 cut(s) 2132, 3416, 3830
AvaII GGWCC 1 cut(s) 44
AvrII CCTAGG 1 cut(s) 371
AxyI CCTNAGG 2 cut(s) 2618, 3378
BaeGI GKGCMC 2 cut(s) 1804, 3831
BaeI ACNNNNGTAYC 2 cut(s) 1334, 1367
BalI TGGCCA 1 cut(s) 1217
BamHI GGATCC 2 cut(s) 3064, 3900
BanI GGYRCC 3 cut(s) 920, 1799, 2109
BanII GRGCYC 2 cut(s) 329, 3301
BbsI GAAGAC 4 cut(s) 382, 2010, 2225, 2493
Bbv12I GWGCWC 3 cut(s) 329, 2971, 3807
BbvCI CCTCAGC 1 cut(s) 476
BbvI GCAGC 7 cut(s) 839, 1576, 1728, 2039, 2462, 2863, 3316
BceAI ACGGC 2 cut(s) 885, 3035
BcgI CGANNNNNNTGC 4 cut(s) 1337, 1355, 1371, 1389
BclI TGATCA 2 cut(s) 3556, 3754
BcnI CCSGG 1 cut(s) 163
BcoDI GTCTC 8 cut(s) 67, 757, 763, 1127, 1471, 1612, 2700, 3413
BfmI CTRYAG 4 cut(s) 1074, 1516, 2292, 3330
BfoI RGCGCY 1 cut(s) 2113
BglII AGATCT 1 cut(s) 294
BisI GCNGC 8 cut(s) 19, 853, 1590, 1742, 2028, 2476, 2877, 3330
BlnI CCTAGG 1 cut(s) 371
BlpI GCTNAGC 2 cut(s) 377, 2455
BlsI GCNGC 8 cut(s) 20, 854, 1591, 1743, 2029, 2477, 2878, 3331
Bme1390I CCNGG 1 cut(s) 163
Bme18I GGWCC 1 cut(s) 44
BmeT110I CYCGRG 3 cut(s) 2132, 3416, 3830
BmgT120I GGNCC 4 cut(s) 44, 812, 1304, 3120
BmrFI CCNGG 1 cut(s) 163
BmrI ACTGGG 2 cut(s) 2212, 3742
BmtI GCTAGC 1 cut(s) 1470
BmuI ACTGGG 2 cut(s) 2212, 3742
BoxI GACNNNNGTC 1 cut(s) 2225
BpiI GAAGAC 4 cut(s) 382, 2010, 2225, 2493
BpmI CTGGAG 5 cut(s) 1896, 2682, 2884, 3012, 3489
Bpu10I CCTNAGC 1 cut(s) 476
Bpu1102I GCTNAGC 2 cut(s) 377, 2455
Bpu14I TTCGAA 2 cut(s) 1850, 1902
BpuMI CCSGG 1 cut(s) 163
BsaAI YACGTR 4 cut(s) 258, 1703, 2832, 2966
BsaBI GATNNNNATC 1 cut(s) 3102
BsaHI GRCGYC 1 cut(s) 2110
BsaWI WCCGGW 3 cut(s) 128, 1571, 3920
BsaXI ACNNNNNCTCC 6 cut(s) 189, 219, 1740, 1770, 2430, 2460
Bsc4I CCNNNNNNNGG 9 cut(s) 41, 53, 907, 1301, 1442, 3077, 3236, 3379, 3515
Bse118I RCCGGY 2 cut(s) 41, 122
Bse21I CCTNAGG 2 cut(s) 2618, 3378
Bse3DI GCAATG 1 cut(s) 3526
Bse8I GATNNNNATC 1 cut(s) 3102
BseJI GATNNNNATC 1 cut(s) 3102
BseLI CCNNNNNNNGG 9 cut(s) 41, 53, 907, 1301, 1442, 3077, 3236, 3379, 3515
BseMI GCAATG 1 cut(s) 3526
BseMII CTCAG 8 cut(s) 490, 873, 2136, 2394, 2469, 3330, 3392, 3604
BseRI GAGGAG 1 cut(s) 1618
BseSI GKGCMC 2 cut(s) 1804, 3831
BseXI GCAGC 7 cut(s) 839, 1576, 1728, 2039, 2462, 2863, 3316
BseYI CCCAGC 1 cut(s) 924
BsgI GTGCAG 1 cut(s) 1727
Bsh1236I CGCG 4 cut(s) 204, 1347, 2933, 3897
Bsh1285I CGRYCG 1 cut(s) 179
BshFI GGCC 5 cut(s) 636, 813, 1217, 1306, 3122
BshNI GGYRCC 3 cut(s) 920, 1799, 2109
BsiEI CGRYCG 1 cut(s) 179
BsiHKAI GWGCWC 3 cut(s) 329, 2971, 3807
BsiHKCI CYCGRG 3 cut(s) 2132, 3416, 3830
BsiSI CCGG 9 cut(s) 22, 42, 123, 129, 162, 594, 1572, 2031, 3921
BslFI GGGAC 2 cut(s) 860, 3906
BslI CCNNNNNNNGG 9 cut(s) 41, 53, 907, 1301, 1442, 3077, 3236, 3379, 3515
BsmAI GTCTC 8 cut(s) 67, 757, 763, 1127, 1471, 1612, 2700, 3413
BsmBI CGTCTC 1 cut(s) 763
BsmFI GGGAC 2 cut(s) 860, 3906
BsmI GAATGC 3 cut(s) 1493, 2272, 3460
BsnI GGCC 5 cut(s) 636, 813, 1217, 1306, 3122
BsoBI CYCGRG 3 cut(s) 2132, 3416, 3830
Bsp119I TTCGAA 2 cut(s) 1850, 1902
Bsp1286I GDGCHC 6 cut(s) 329, 1804, 2971, 3301, 3807, 3831
Bsp1407I TGTACA 1 cut(s) 893
Bsp1720I GCTNAGC 2 cut(s) 377, 2455
Bsp19I CCATGG 5 cut(s) 208, 658, 1225, 1317, 1804
BspACI CCGC 9 cut(s) 5, 19, 245, 553, 2306, 2933, 3546, 3890, 3897
BspANI GGCC 5 cut(s) 636, 813, 1217, 1306, 3122
BspCNI CTCAG 8 cut(s) 489, 872, 2137, 2395, 2468, 3329, 3391, 3603
BspFNI CGCG 4 cut(s) 204, 1347, 2933, 3897
BspHI TCATGA 1 cut(s) 3073
BspMAI CTGCAG 1 cut(s) 3334
BspOI GCTAGC 1 cut(s) 1470
BspT104I TTCGAA 2 cut(s) 1850, 1902
BspT107I GGYRCC 3 cut(s) 920, 1799, 2109
BsrDI GCAATG 1 cut(s) 3526
BsrFI RCCGGY 2 cut(s) 41, 122
BsrGI TGTACA 1 cut(s) 893
BssAI RCCGGY 2 cut(s) 41, 122
BssNAI GTATAC 1 cut(s) 546
BssNI GRCGYC 1 cut(s) 2110
BssT1I CCWWGG 7 cut(s) 208, 371, 658, 1225, 1317, 1804, 3009
Bst1107I GTATAC 1 cut(s) 546
Bst6I CTCTTC 4 cut(s) 70, 949, 3235, 3417
BstACI GRCGYC 1 cut(s) 2110
BstAPI GCANNNNNTGC 1 cut(s) 3848
BstAUI TGTACA 1 cut(s) 893
BstBAI YACGTR 4 cut(s) 258, 1703, 2832, 2966
BstBI TTCGAA 2 cut(s) 1850, 1902
BstC8I GCNNGC 7 cut(s) 1184, 1444, 1468, 2108, 2718, 3807, 3827
BstDSI CCRYGG 7 cut(s) 208, 658, 1225, 1317, 1804, 3230, 3673
BstENI CCTNNNNNAGG 2 cut(s) 1299, 3075
BstFNI CGCG 4 cut(s) 204, 1347, 2933, 3897
BstH2I RGCGCY 1 cut(s) 2113
BstHHI GCGC 1 cut(s) 2112
BstMAI GTCTC 8 cut(s) 67, 757, 763, 1127, 1471, 1612, 2700, 3413
BstMCI CGRYCG 1 cut(s) 179
BstMWI GCNNNNNNNGC 3 cut(s) 2036, 2882, 3848
BstNSI RCATGY 8 cut(s) 98, 900, 1442, 1741, 2447, 2530, 2731, 3446
BstPAI GACNNNNGTC 1 cut(s) 2225
BstSCI CCNGG 1 cut(s) 161
BstSFI CTRYAG 4 cut(s) 1074, 1516, 2292, 3330
BstSLI GKGCMC 2 cut(s) 1804, 3831
BstSNI TACGTA 2 cut(s) 258, 2832
BstUI CGCG 4 cut(s) 204, 1347, 2933, 3897
BstV1I GCAGC 7 cut(s) 839, 1576, 1728, 2039, 2462, 2863, 3316
BstV2I GAAGAC 4 cut(s) 382, 2010, 2225, 2493
BstX2I RGATCY 7 cut(s) 294, 2375, 2822, 3064, 3340, 3631, 3900
BstXI CCANNNNNNTGG 1 cut(s) 1213
BstYI RGATCY 7 cut(s) 294, 2375, 2822, 3064, 3340, 3631, 3900
BstZ17I GTATAC 1 cut(s) 546
Bsu36I CCTNAGG 2 cut(s) 2618, 3378
BsuRI GGCC 5 cut(s) 636, 813, 1217, 1306, 3122
BtgI CCRYGG 7 cut(s) 208, 658, 1225, 1317, 1804, 3230, 3673
BtsI GCAGTG 3 cut(s) 876, 2553, 2880
BtsIMutI CAGTG 7 cut(s) 838, 876, 2200, 2553, 2706, 2880, 3121
Cac8I GCNNGC 7 cut(s) 1184, 1444, 1468, 2108, 2718, 3807, 3827
CciI TCATGA 1 cut(s) 3073
CfoI GCGC 1 cut(s) 2112
Cfr10I RCCGGY 2 cut(s) 41, 122
Cfr13I GGNCC 4 cut(s) 44, 812, 1304, 3120
CseI GACGC 5 cut(s) 193, 1670, 2028, 2670, 3903
Csp6I GTAC 8 cut(s) 894, 921, 1031, 1175, 1237, 1343, 2510, 3208
CviQI GTAC 8 cut(s) 894, 921, 1031, 1175, 1237, 1343, 2510, 3208
DinI GGCGCC 1 cut(s) 2111
EaeI YGGCCR 1 cut(s) 1215
Eam1104I CTCTTC 4 cut(s) 70, 949, 3235, 3417
EarI CTCTTC 4 cut(s) 70, 949, 3235, 3417
EciI GGCGGA 2 cut(s) 20, 260
Ecl136II GAGCTC 1 cut(s) 327
Eco105I TACGTA 2 cut(s) 258, 2832
Eco130I CCWWGG 7 cut(s) 208, 371, 658, 1225, 1317, 1804, 3009
Eco24I GRGCYC 2 cut(s) 329, 3301
Eco47I GGWCC 1 cut(s) 44
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 3 cut(s) 1317, 1746, 2340
Eco81I CCTNAGG 2 cut(s) 2618, 3378
Eco88I CYCGRG 3 cut(s) 2132, 3416, 3830
EcoICRI GAGCTC 1 cut(s) 327
EcoNI CCTNNNNNAGG 2 cut(s) 1299, 3075
EcoO109I RGGNCCY 1 cut(s) 1304
EcoRI GAATTC 2 cut(s) 1622, 3914
EcoT14I CCWWGG 7 cut(s) 208, 371, 658, 1225, 1317, 1804, 3009
EcoT22I ATGCAT 1 cut(s) 2401
EcoT38I GRGCYC 2 cut(s) 329, 3301
EgeI GGCGCC 1 cut(s) 2111
EheI GGCGCC 1 cut(s) 2111
ErhI CCWWGG 7 cut(s) 208, 371, 658, 1225, 1317, 1804, 3009
Esp3I CGTCTC 1 cut(s) 763
FalI AAGNNNNNCTT 2 cut(s) 429, 461
FaqI GGGAC 2 cut(s) 860, 3906
FauI CCCGC 4 cut(s) 2299, 3539, 3883, 3890
FauNDI CATATG 4 cut(s) 681, 962, 1892, 2167
FbaI TGATCA 2 cut(s) 3556, 3754
FblI GTMKAC 4 cut(s) 538, 545, 654, 2629
Fnu4HI GCNGC 8 cut(s) 19, 853, 1590, 1742, 2028, 2476, 2877, 3330
FriOI GRGCYC 2 cut(s) 329, 3301
Fsp4HI GCNGC 8 cut(s) 19, 853, 1590, 1742, 2028, 2476, 2877, 3330
GlaI GCGC 1 cut(s) 2111
GluI GCNGC 8 cut(s) 19, 853, 1590, 1742, 2028, 2476, 2877, 3330
GsaI CCCAGC 1 cut(s) 928
GsuI CTGGAG 5 cut(s) 1896, 2682, 2884, 3012, 3489
HaeII RGCGCY 1 cut(s) 2113
HaeIII GGCC 5 cut(s) 636, 813, 1217, 1306, 3122
HapII CCGG 9 cut(s) 22, 42, 123, 129, 162, 594, 1572, 2031, 3921
HgaI GACGC 5 cut(s) 193, 1670, 2028, 2670, 3903
HhaI GCGC 1 cut(s) 2112
Hin1I GRCGYC 1 cut(s) 2110
Hin6I GCGC 1 cut(s) 2110
HinP1I GCGC 1 cut(s) 2110
HincII GTYRAC 4 cut(s) 655, 1660, 2043, 2421
HindII GTYRAC 4 cut(s) 655, 1660, 2043, 2421
HindIII AAGCTT 3 cut(s) 229, 443, 3168
HpaII CCGG 9 cut(s) 22, 42, 123, 129, 162, 594, 1572, 2031, 3921
HphI GGTGA 9 cut(s) 344, 516, 656, 896, 1083, 1433, 1693, 3335, 3563
Hpy99I CGWCG 1 cut(s) 398
HpyAV CCTTC 8 cut(s) 1004, 1295, 1456, 2167, 2774, 3071, 3491, 3575
HpyF10VI GCNNNNNNNGC 3 cut(s) 2036, 2882, 3848
Hsp92I GRCGYC 1 cut(s) 2110
HspAI GCGC 1 cut(s) 2110
KasI GGCGCC 1 cut(s) 2109
KpnI GGTACC 1 cut(s) 924
Ksp22I TGATCA 2 cut(s) 3556, 3754
LmnI GCTCC 4 cut(s) 1877, 2588, 2619, 3284
Lsp1109I GCAGC 7 cut(s) 839, 1576, 1728, 2039, 2462, 2863, 3316
MfeI CAATTG 3 cut(s) 382, 1037, 1404
MflI RGATCY 7 cut(s) 294, 2375, 2822, 3064, 3340, 3631, 3900
MhlI GDGCHC 6 cut(s) 329, 1804, 2971, 3301, 3807, 3831
MlsI TGGCCA 1 cut(s) 1217
MluNI TGGCCA 1 cut(s) 1217
Mly113I GGCGCC 1 cut(s) 2110
MlyI GAGTC 6 cut(s) 407, 571, 788, 1010, 1358, 1542
MmeI TCCRAC 6 cut(s) 408, 1439, 2188, 2330, 2428, 2566
Mox20I TGGCCA 1 cut(s) 1217
Mph1103I ATGCAT 1 cut(s) 2401
MroXI GAANNNNTTC 2 cut(s) 171, 1284
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 6 cut(s) 492, 1086, 1844, 2066, 3474, 3925
MslI CAYNNNNRTG 4 cut(s) 1047, 1211, 1498, 3824
Msp20I TGGCCA 1 cut(s) 1217
MspA1I CMGCKG 3 cut(s) 928, 2072, 2459
MspI CCGG 9 cut(s) 22, 42, 123, 129, 162, 594, 1572, 2031, 3921
MspR9I CCNGG 1 cut(s) 163
MunI CAATTG 3 cut(s) 382, 1037, 1404
Mva1269I GAATGC 3 cut(s) 1493, 2272, 3460
MvnI CGCG 4 cut(s) 204, 1347, 2933, 3897
MwoI GCNNNNNNNGC 3 cut(s) 2036, 2882, 3848
NarI GGCGCC 1 cut(s) 2110
NciI CCSGG 1 cut(s) 163
NcoI CCATGG 5 cut(s) 208, 658, 1225, 1317, 1804
NdeI CATATG 4 cut(s) 681, 962, 1892, 2167
NheI GCTAGC 1 cut(s) 1466
NmuCI GTSAC 6 cut(s) 522, 644, 827, 874, 2701, 2809
NsiI ATGCAT 1 cut(s) 2401
NspI RCATGY 8 cut(s) 98, 900, 1442, 1741, 2447, 2530, 2731, 3446
NspV TTCGAA 2 cut(s) 1850, 1902
PagI TCATGA 1 cut(s) 3073
PciI ACATGT 4 cut(s) 94, 2443, 2526, 3442
PctI GAATGC 3 cut(s) 1493, 2272, 3460
PdmI GAANNNNTTC 2 cut(s) 171, 1284
PflFI GACNNNGTC 1 cut(s) 650
PflMI CCANNNNNTGG 2 cut(s) 1442, 3236
PkrI GCNGC 8 cut(s) 20, 854, 1591, 1743, 2029, 2477, 2878, 3331
Ple19I CGATCG 1 cut(s) 179
PleI GAGTC 6 cut(s) 407, 571, 788, 1010, 1357, 1542
PluTI GGCGCC 1 cut(s) 2113
PpsI GAGTC 6 cut(s) 407, 571, 788, 1010, 1357, 1542
Ppu21I YACGTR 4 cut(s) 258, 1703, 2832, 2966
PscI ACATGT 4 cut(s) 94, 2443, 2526, 3442
PshAI GACNNNNGTC 1 cut(s) 2225
Psp124BI GAGCTC 1 cut(s) 329
PspFI CCCAGC 1 cut(s) 924
PspPI GGNCC 4 cut(s) 44, 812, 1304, 3120
PstI CTGCAG 1 cut(s) 3334
PsuI RGATCY 7 cut(s) 294, 2375, 2822, 3064, 3340, 3631, 3900
PsyI GACNNNGTC 1 cut(s) 650
PvuI CGATCG 1 cut(s) 179
PvuII CAGCTG 3 cut(s) 928, 2072, 2459
RsaI GTAC 8 cut(s) 895, 922, 1032, 1176, 1238, 1344, 2511, 3209
RsaNI GTAC 8 cut(s) 894, 921, 1031, 1175, 1237, 1343, 2510, 3208
RseI CAYNNNNRTG 4 cut(s) 1047, 1211, 1498, 3824
SacI GAGCTC 1 cut(s) 329
SalI GTCGAC 1 cut(s) 653
SaqAI TTAA 6 cut(s) 492, 1086, 1844, 2066, 3474, 3925
SatI GCNGC 8 cut(s) 19, 853, 1590, 1742, 2028, 2476, 2877, 3330
Sau96I GGNCC 4 cut(s) 44, 812, 1304, 3120
SchI GAGTC 6 cut(s) 407, 571, 788, 1010, 1358, 1542
ScrFI CCNGG 1 cut(s) 163
SduI GDGCHC 6 cut(s) 329, 1804, 2971, 3301, 3807, 3831
SfcI CTRYAG 4 cut(s) 1074, 1516, 2292, 3330
SfoI GGCGCC 1 cut(s) 2111
SfuI TTCGAA 2 cut(s) 1850, 1902
SinI GGWCC 1 cut(s) 44
SmiMI CAYNNNNRTG 4 cut(s) 1047, 1211, 1498, 3824
SnaBI TACGTA 2 cut(s) 258, 2832
SsiI CCGC 9 cut(s) 5, 19, 245, 553, 2306, 2933, 3546, 3890, 3897
SspDI GGCGCC 1 cut(s) 2109
SspI AATATT 4 cut(s) 273, 714, 1109, 1790
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 1 cut(s) 161
StyI CCWWGG 7 cut(s) 208, 371, 658, 1225, 1317, 1804, 3009
TaqII GACCGA 1 cut(s) 2331
TatI WGTACW 3 cut(s) 893, 1030, 3207
TauI GCSGC 1 cut(s) 21
Tru1I TTAA 6 cut(s) 492, 1086, 1844, 2066, 3474, 3925
Tru9I TTAA 6 cut(s) 492, 1086, 1844, 2066, 3474, 3925
TscAI CASTG 7 cut(s) 838, 883, 2207, 2553, 2706, 2887, 3121
TseFI GTSAC 6 cut(s) 522, 644, 827, 874, 2701, 2809
TseI GCWGC 7 cut(s) 852, 1589, 1741, 2027, 2475, 2876, 3329
Tsp45I GTSAC 6 cut(s) 522, 644, 827, 874, 2701, 2809
TspGWI ACGGA 6 cut(s) 331, 572, 745, 1169, 1761, 3247
TspRI CASTG 7 cut(s) 838, 883, 2207, 2553, 2706, 2887, 3121
Tth111I GACNNNGTC 1 cut(s) 650
Van91I CCANNNNNTGG 2 cut(s) 1442, 3236
VpaK11BI GGWCC 1 cut(s) 44
XagI CCTNNNNNAGG 2 cut(s) 1299, 3075
XapI RAATTY 9 cut(s) 346, 355, 516, 1129, 1622, 2062, 2239, 3285, 3914
XceI RCATGY 8 cut(s) 98, 900, 1442, 1741, 2447, 2530, 2731, 3446
XcmI CCANNNNNNNNNTGG 1 cut(s) 2988
XmaJI CCTAGG 1 cut(s) 371
XmiI GTMKAC 4 cut(s) 538, 545, 654, 2629
XmnI GAANNNNTTC 2 cut(s) 171, 1284
Zsp2I ATGCAT 1 cut(s) 2401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.