WD repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1049 |
| AccB1I | GGYRCC | 4 cut(s) | 212, 310, 504, 2336 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1097 |
| AccI | GTMKAC | 1 cut(s) | 2098 |
| AccII | CGCG | 1 cut(s) | 297 |
| AciI | CCGC | 4 cut(s) | 20, 1105, 1591, 1658 |
| AclWI | GGATC | 9 cut(s) | 91, 536, 1423, 1453, 1649, 2800, 2813, 2884, 2910 |
| AcoI | YGGCCR | 1 cut(s) | 2258 |
| AcsI | RAATTY | 8 cut(s) | 617, 926, 1057, 1234, 2380, 2705, 2734, 3072 |
| AcuI | CTGAAG | 2 cut(s) | 2127, 2912 |
| AcyI | GRCGYC | 2 cut(s) | 1108, 2923 |
| AfaI | GTAC | 6 cut(s) | 115, 248, 436, 1203, 1650, 2494 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 63, 64, 446, 462, 1097, 1941, 2108, 2267, 2615 |
| AflIII | ACRYGT | 2 cut(s) | 203, 1688 |
| AjnI | CCWGG | 3 cut(s) | 132, 1300, 1940 |
| AleI | CACNNNNGTG | 1 cut(s) | 502 |
| Alw21I | GWGCWC | 3 cut(s) | 168, 499, 799 |
| Alw26I | GTCTC | 6 cut(s) | 146, 609, 979, 1064, 1288, 1550 |
| AlwI | GGATC | 9 cut(s) | 91, 536, 1423, 1453, 1649, 2800, 2813, 2884, 2910 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2919, 3038, 3058 |
| Ama87I | CYCGRG | 1 cut(s) | 57 |
| AoxI | GGCC | 3 cut(s) | 130, 2258, 2547 |
| ApeKI | GCWGC | 5 cut(s) | 72, 1022, 1660, 1832, 2209 |
| ApoI | RAATTY | 8 cut(s) | 617, 926, 1057, 1234, 2380, 2705, 2734, 3072 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2550, 2582 |
| AseI | ATTAAT | 1 cut(s) | 2945 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 183 |
| AspLEI | GCGC | 1 cut(s) | 431 |
| AspS9I | GGNCC | 3 cut(s) | 130, 1318, 2179 |
| AsuHPI | GGTGA | 6 cut(s) | 116, 1142, 1223, 2049, 2520, 2657 |
| AvaI | CYCGRG | 1 cut(s) | 57 |
| AvaII | GGWCC | 2 cut(s) | 1318, 2179 |
| BaeGI | GKGCMC | 3 cut(s) | 58, 215, 746 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 258, 291 |
| BamHI | GGATCC | 1 cut(s) | 2805 |
| BanI | GGYRCC | 4 cut(s) | 212, 310, 504, 2336 |
| BanII | GRGCYC | 2 cut(s) | 799, 2002 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1632, 1664, 2431, 2463 |
| BbsI | GAAGAC | 5 cut(s) | 1072, 1368, 2296, 2533, 2918 |
| Bbv12I | GWGCWC | 3 cut(s) | 168, 499, 799 |
| BbvCI | CCTCAGC | 1 cut(s) | 2836 |
| BbvI | GCAGC | 5 cut(s) | 59, 1009, 1672, 1844, 2221 |
| BceAI | ACGGC | 2 cut(s) | 2273, 2837 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 733, 767 |
| BciT130I | CCWGG | 3 cut(s) | 134, 1302, 1942 |
| BciVI | GTATCC | 1 cut(s) | 259 |
| BclI | TGATCA | 3 cut(s) | 577, 1798, 2650 |
| BcoDI | GTCTC | 6 cut(s) | 146, 609, 979, 1064, 1288, 1550 |
| BfmI | CTRYAG | 4 cut(s) | 1330, 1734, 2014, 2072 |
| BfoI | RGCGCY | 1 cut(s) | 432 |
| BfuI | GTATCC | 1 cut(s) | 259 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2017 |
| BglII | AGATCT | 2 cut(s) | 1334, 2300 |
| BisI | GCNGC | 6 cut(s) | 73, 1023, 1106, 1661, 1833, 2210 |
| BlpI | GCTNAGC | 1 cut(s) | 255 |
| BlsI | GCNGC | 6 cut(s) | 74, 1024, 1107, 1662, 1834, 2211 |
| BmcAI | AGTACT | 1 cut(s) | 2494 |
| Bme1390I | CCNGG | 3 cut(s) | 134, 1302, 1942 |
| Bme18I | GGWCC | 2 cut(s) | 1318, 2179 |
| BmeT110I | CYCGRG | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 3 cut(s) | 130, 1318, 2179 |
| BmiI | GGNNCC | 7 cut(s) | 131, 214, 312, 506, 2180, 2338, 2807 |
| BmrFI | CCNGG | 3 cut(s) | 134, 1302, 1942 |
| BmrI | ACTGGG | 3 cut(s) | 1207, 1320, 3091 |
| BmuI | ACTGGG | 3 cut(s) | 1207, 1320, 3091 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1076 |
| BpiI | GAAGAC | 5 cut(s) | 1072, 1368, 2296, 2533, 2918 |
| BpmI | CTGGAG | 6 cut(s) | 802, 891, 1323, 1915, 2382, 3080 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2660, 2836 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 255 |
| BsaAI | YACGTR | 1 cut(s) | 698 |
| BsaHI | GRCGYC | 2 cut(s) | 1108, 2923 |
| BsaI | GGTCTC | 1 cut(s) | 1064 |
| BsaJI | CCNNGG | 4 cut(s) | 235, 490, 1074, 1252 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 559, 589, 1847, 1877, 2263, 2293 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 63, 64, 446, 462, 1097, 1941, 2108, 2267, 2615 |
| Bse3DI | GCAATG | 1 cut(s) | 1816 |
| BseBI | CCWGG | 3 cut(s) | 134, 1302, 1942 |
| BseDI | CCNNGG | 4 cut(s) | 235, 490, 1074, 1252 |
| BseGI | GGATG | 7 cut(s) | 142, 942, 1106, 1177, 2082, 2407, 3001 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 63, 64, 446, 462, 1097, 1941, 2108, 2267, 2615 |
| BseMI | GCAATG | 1 cut(s) | 1816 |
| BseMII | CTCAG | 4 cut(s) | 1059, 1299, 2594, 2850 |
| BseRI | GAGGAG | 2 cut(s) | 320, 807 |
| BseSI | GKGCMC | 3 cut(s) | 58, 215, 746 |
| BseX3I | CGGCCG | 1 cut(s) | 2258 |
| BseXI | GCAGC | 5 cut(s) | 59, 1009, 1672, 1844, 2221 |
| BseYI | CCCAGC | 2 cut(s) | 739, 3038 |
| Bsh1236I | CGCG | 1 cut(s) | 297 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2261 |
| BshFI | GGCC | 3 cut(s) | 132, 2260, 2549 |
| BshNI | GGYRCC | 4 cut(s) | 212, 310, 504, 2336 |
| BsiEI | CGRYCG | 1 cut(s) | 2261 |
| BsiHKAI | GWGCWC | 3 cut(s) | 168, 499, 799 |
| BsiHKCI | CYCGRG | 1 cut(s) | 57 |
| BslFI | GGGAC | 3 cut(s) | 80, 1681, 2192 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 63, 64, 446, 462, 1097, 1941, 2108, 2267, 2615 |
| BsmAI | GTCTC | 6 cut(s) | 146, 609, 979, 1064, 1288, 1550 |
| BsmFI | GGGAC | 3 cut(s) | 80, 1681, 2192 |
| BsmI | GAATGC | 5 cut(s) | 4, 1267, 1509, 2392, 3054 |
| BsnI | GGCC | 3 cut(s) | 132, 2260, 2549 |
| Bso31I | GGTCTC | 1 cut(s) | 1064 |
| BsoBI | CYCGRG | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 7 cut(s) | 58, 168, 215, 499, 746, 799, 2002 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 255 |
| Bsp19I | CCATGG | 2 cut(s) | 235, 1252 |
| BspACI | CCGC | 4 cut(s) | 20, 1105, 1591, 1658 |
| BspANI | GGCC | 3 cut(s) | 132, 2260, 2549 |
| BspCNI | CTCAG | 4 cut(s) | 1060, 1298, 2595, 2849 |
| BspFNI | CGCG | 1 cut(s) | 297 |
| BspHI | TCATGA | 1 cut(s) | 2821 |
| BspLI | GGNNCC | 7 cut(s) | 131, 214, 312, 506, 2180, 2338, 2807 |
| BspPI | GGATC | 9 cut(s) | 91, 536, 1423, 1453, 1649, 2800, 2813, 2884, 2910 |
| BspT107I | GGYRCC | 4 cut(s) | 212, 310, 504, 2336 |
| BspTNI | GGTCTC | 1 cut(s) | 1064 |
| BsrDI | GCAATG | 1 cut(s) | 1816 |
| BssECI | CCNNGG | 4 cut(s) | 235, 490, 1074, 1252 |
| BssNI | GRCGYC | 2 cut(s) | 1108, 2923 |
| BssT1I | CCWWGG | 4 cut(s) | 235, 490, 1074, 1252 |
| Bst2UI | CCWGG | 3 cut(s) | 134, 1302, 1942 |
| Bst6I | CTCTTC | 2 cut(s) | 666, 722 |
| BstACI | GRCGYC | 2 cut(s) | 1108, 2923 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2996 |
| BstBAI | YACGTR | 1 cut(s) | 698 |
| BstC8I | GCNNGC | 6 cut(s) | 18, 194, 982, 1746, 1807, 2921 |
| BstDSI | CCRYGG | 2 cut(s) | 235, 1252 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2106 |
| BstF5I | GGATG | 7 cut(s) | 142, 942, 1106, 1177, 2082, 2407, 3001 |
| BstFNI | CGCG | 1 cut(s) | 297 |
| BstH2I | RGCGCY | 1 cut(s) | 432 |
| BstHHI | GCGC | 1 cut(s) | 431 |
| BstMAI | GTCTC | 6 cut(s) | 146, 609, 979, 1064, 1288, 1550 |
| BstMCI | CGRYCG | 1 cut(s) | 2261 |
| BstNI | CCWGG | 3 cut(s) | 134, 1302, 1942 |
| BstNSI | RCATGY | 7 cut(s) | 207, 1439, 1692, 2081, 2097, 2320, 2459 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1076 |
| BstSCI | CCNGG | 3 cut(s) | 132, 1300, 1940 |
| BstSFI | CTRYAG | 4 cut(s) | 1330, 1734, 2014, 2072 |
| BstSLI | GKGCMC | 3 cut(s) | 58, 215, 746 |
| BstUI | CGCG | 1 cut(s) | 297 |
| BstV1I | GCAGC | 5 cut(s) | 59, 1009, 1672, 1844, 2221 |
| BstV2I | GAAGAC | 5 cut(s) | 1072, 1368, 2296, 2533, 2918 |
| BstX2I | RGATCY | 4 cut(s) | 1334, 2300, 2805, 2876 |
| BstYI | RGATCY | 4 cut(s) | 1334, 2300, 2805, 2876 |
| BstZI | CGGCCG | 1 cut(s) | 2258 |
| BsuI | GTATCC | 1 cut(s) | 259 |
| BsuRI | GGCC | 3 cut(s) | 132, 2260, 2549 |
| BtgI | CCRYGG | 2 cut(s) | 235, 1252 |
| BtsCI | GGATG | 7 cut(s) | 142, 942, 1106, 1177, 2082, 2407, 3001 |
| BtsI | GCAGTG | 1 cut(s) | 534 |
| Cac8I | GCNNGC | 6 cut(s) | 18, 194, 982, 1746, 1807, 2921 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2919, 3038, 3058 |
| CciI | TCATGA | 1 cut(s) | 2821 |
| CfoI | GCGC | 1 cut(s) | 431 |
| Cfr13I | GGNCC | 3 cut(s) | 130, 1318, 2179 |
| CseI | GACGC | 3 cut(s) | 286, 1097, 2912 |
| Csp6I | GTAC | 6 cut(s) | 114, 247, 435, 1202, 1649, 2493 |
| CviQI | GTAC | 6 cut(s) | 114, 247, 435, 1202, 1649, 2493 |
| EaeI | YGGCCR | 1 cut(s) | 2258 |
| EagI | CGGCCG | 1 cut(s) | 2258 |
| Eam1104I | CTCTTC | 2 cut(s) | 666, 722 |
| EarI | CTCTTC | 2 cut(s) | 666, 722 |
| Ecl136II | GAGCTC | 1 cut(s) | 797 |
| EclXI | CGGCCG | 1 cut(s) | 2258 |
| Eco130I | CCWWGG | 4 cut(s) | 235, 490, 1074, 1252 |
| Eco24I | GRGCYC | 2 cut(s) | 799, 2002 |
| Eco31I | GGTCTC | 1 cut(s) | 1064 |
| Eco32I | GATATC | 2 cut(s) | 807, 1177 |
| Eco47I | GGWCC | 2 cut(s) | 1318, 2179 |
| Eco52I | CGGCCG | 1 cut(s) | 2258 |
| Eco53kI | GAGCTC | 1 cut(s) | 797 |
| Eco57I | CTGAAG | 2 cut(s) | 2127, 2912 |
| Eco88I | CYCGRG | 1 cut(s) | 57 |
| EcoICRI | GAGCTC | 1 cut(s) | 797 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2106 |
| EcoO109I | RGGNCCY | 2 cut(s) | 130, 2179 |
| EcoRI | GAATTC | 1 cut(s) | 617 |
| EcoRII | CCWGG | 3 cut(s) | 132, 1300, 1940 |
| EcoRV | GATATC | 2 cut(s) | 807, 1177 |
| EcoT14I | CCWWGG | 4 cut(s) | 235, 490, 1074, 1252 |
| EcoT22I | ATGCAT | 3 cut(s) | 6, 661, 1269 |
| EcoT38I | GRGCYC | 2 cut(s) | 799, 2002 |
| ErhI | CCWWGG | 4 cut(s) | 235, 490, 1074, 1252 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1139, 1171, 1580, 1612 |
| FaqI | GGGAC | 3 cut(s) | 80, 1681, 2192 |
| FauI | CCCGC | 1 cut(s) | 1584 |
| FauNDI | CATATG | 5 cut(s) | 1162, 1242, 1274, 1500, 2516 |
| FbaI | TGATCA | 3 cut(s) | 577, 1798, 2650 |
| FblI | GTMKAC | 1 cut(s) | 2098 |
| Fnu4HI | GCNGC | 6 cut(s) | 73, 1023, 1106, 1661, 1833, 2210 |
| FokI | GGATG | 7 cut(s) | 149, 949, 1113, 1184, 2069, 2414, 3008 |
| FriOI | GRGCYC | 2 cut(s) | 799, 2002 |
| Fsp4HI | GCNGC | 6 cut(s) | 73, 1023, 1106, 1661, 1833, 2210 |
| GlaI | GCGC | 1 cut(s) | 430 |
| GluI | GCNGC | 6 cut(s) | 73, 1023, 1106, 1661, 1833, 2210 |
| GsaI | CCCAGC | 2 cut(s) | 743, 3042 |
| GsuI | CTGGAG | 6 cut(s) | 802, 891, 1323, 1915, 2382, 3080 |
| HaeII | RGCGCY | 1 cut(s) | 432 |
| HaeIII | GGCC | 3 cut(s) | 132, 2260, 2549 |
| HgaI | GACGC | 3 cut(s) | 286, 1097, 2912 |
| HhaI | GCGC | 1 cut(s) | 431 |
| Hin1I | GRCGYC | 2 cut(s) | 1108, 2923 |
| Hin6I | GCGC | 1 cut(s) | 429 |
| HinP1I | GCGC | 1 cut(s) | 429 |
| HincII | GTYRAC | 2 cut(s) | 1380, 2691 |
| HindII | GTYRAC | 2 cut(s) | 1380, 2691 |
| HindIII | AAGCTT | 1 cut(s) | 2199 |
| HinfI | GANTC | 9 cut(s) | 23, 958, 1558, 1703, 1856, 2480, 2501, 2605, 2811 |
| HphI | GGTGA | 6 cut(s) | 116, 1142, 1223, 2049, 2520, 2657 |
| Hpy166II | GTNNAC | 4 cut(s) | 1380, 1630, 2099, 2691 |
| Hpy188III | TCNNGA | 8 cut(s) | 896, 1413, 1597, 1786, 2609, 2822, 2900, 2930 |
| Hpy8I | GTNNAC | 4 cut(s) | 1380, 1630, 2099, 2691 |
| HpyCH4IV | ACGT | 1 cut(s) | 697 |
| HpySE526I | ACGT | 1 cut(s) | 697 |
| Hsp92I | GRCGYC | 2 cut(s) | 1108, 2923 |
| HspAI | GCGC | 1 cut(s) | 429 |
| Ksp22I | TGATCA | 3 cut(s) | 577, 1798, 2650 |
| LmnI | GCTCC | 6 cut(s) | 163, 494, 794, 872, 1432, 2433 |
| Lsp1109I | GCAGC | 5 cut(s) | 59, 1009, 1672, 1844, 2221 |
| MaeII | ACGT | 1 cut(s) | 697 |
| MaeIII | GTNAC | 6 cut(s) | 47, 94, 510, 518, 1306, 1909 |
| MfeI | CAATTG | 2 cut(s) | 315, 2113 |
| MflI | RGATCY | 4 cut(s) | 1334, 2300, 2805, 2876 |
| MhlI | GDGCHC | 7 cut(s) | 58, 168, 215, 499, 746, 799, 2002 |
| MlyI | GAGTC | 6 cut(s) | 17, 967, 1552, 1712, 1850, 2614 |
| MmeI | TCCRAC | 4 cut(s) | 364, 1322, 1586, 1799 |
| Mph1103I | ATGCAT | 3 cut(s) | 6, 661, 1269 |
| MroXI | GAANNNNTTC | 1 cut(s) | 183 |
| MseI | TTAA | 9 cut(s) | 89, 366, 765, 1064, 1167, 1872, 2633, 2816, 2945 |
| MslI | CAYNNNNRTG | 4 cut(s) | 502, 1440, 1723, 2972 |
| MspA1I | CMGCKG | 5 cut(s) | 20, 101, 470, 1451, 2212 |
| MspR9I | CCNGG | 3 cut(s) | 134, 1302, 1942 |
| MunI | CAATTG | 2 cut(s) | 315, 2113 |
| Mva1269I | GAATGC | 5 cut(s) | 4, 1267, 1509, 2392, 3054 |
| MvaI | CCWGG | 3 cut(s) | 134, 1302, 1942 |
| MvnI | CGCG | 1 cut(s) | 297 |
| NcoI | CCATGG | 2 cut(s) | 235, 1252 |
| NdeI | CATATG | 5 cut(s) | 1162, 1242, 1274, 1500, 2516 |
| NlaIV | GGNNCC | 7 cut(s) | 131, 214, 312, 506, 2180, 2338, 2807 |
| NmeAIII | GCCGAG | 1 cut(s) | 2286 |
| NmuCI | GTSAC | 3 cut(s) | 47, 94, 510 |
| NsiI | ATGCAT | 3 cut(s) | 6, 661, 1269 |
| NspI | RCATGY | 7 cut(s) | 207, 1439, 1692, 2081, 2097, 2320, 2459 |
| OliI | CACNNNNGTG | 1 cut(s) | 502 |
| PagI | TCATGA | 1 cut(s) | 2821 |
| PciI | ACATGT | 2 cut(s) | 203, 1688 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 193 |
| PctI | GAATGC | 5 cut(s) | 4, 1267, 1509, 2392, 3054 |
| PdmI | GAANNNNTTC | 1 cut(s) | 183 |
| PfeI | GAWTC | 3 cut(s) | 2480, 2501, 2811 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1097 |
| PfoI | TCCNGGA | 1 cut(s) | 1940 |
| PkrI | GCNGC | 6 cut(s) | 74, 1024, 1107, 1662, 1834, 2211 |
| PleI | GAGTC | 6 cut(s) | 17, 966, 1552, 1711, 1850, 2613 |
| PpsI | GAGTC | 6 cut(s) | 17, 966, 1552, 1711, 1850, 2613 |
| Ppu21I | YACGTR | 1 cut(s) | 698 |
| PpuMI | RGGWCCY | 1 cut(s) | 2179 |
| PscI | ACATGT | 2 cut(s) | 203, 1688 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1076 |
| PshBI | ATTAAT | 1 cut(s) | 2945 |
| PsiI | TTATAA | 1 cut(s) | 1049 |
| Psp124BI | GAGCTC | 1 cut(s) | 799 |
| Psp5II | RGGWCCY | 1 cut(s) | 2179 |
| Psp6I | CCWGG | 3 cut(s) | 132, 1300, 1940 |
| PspFI | CCCAGC | 2 cut(s) | 739, 3038 |
| PspGI | CCWGG | 3 cut(s) | 132, 1300, 1940 |
| PspN4I | GGNNCC | 7 cut(s) | 131, 214, 312, 506, 2180, 2338, 2807 |
| PspPI | GGNCC | 3 cut(s) | 130, 1318, 2179 |
| PspPPI | RGGWCCY | 1 cut(s) | 2179 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2919, 3038, 3058 |
| PsuI | RGATCY | 4 cut(s) | 1334, 2300, 2805, 2876 |
| PvuII | CAGCTG | 4 cut(s) | 101, 470, 1451, 2212 |
| RsaI | GTAC | 6 cut(s) | 115, 248, 436, 1203, 1650, 2494 |
| RsaNI | GTAC | 6 cut(s) | 114, 247, 435, 1202, 1649, 2493 |
| RseI | CAYNNNNRTG | 4 cut(s) | 502, 1440, 1723, 2972 |
| SacI | GAGCTC | 1 cut(s) | 799 |
| SaqAI | TTAA | 9 cut(s) | 89, 366, 765, 1064, 1167, 1872, 2633, 2816, 2945 |
| SatI | GCNGC | 6 cut(s) | 73, 1023, 1106, 1661, 1833, 2210 |
| Sau96I | GGNCC | 3 cut(s) | 130, 1318, 2179 |
| ScaI | AGTACT | 1 cut(s) | 2494 |
| SchI | GAGTC | 6 cut(s) | 17, 967, 1552, 1712, 1850, 2614 |
| ScrFI | CCNGG | 3 cut(s) | 134, 1302, 1942 |
| SduI | GDGCHC | 7 cut(s) | 58, 168, 215, 499, 746, 799, 2002 |
| SfcI | CTRYAG | 4 cut(s) | 1330, 1734, 2014, 2072 |
| SinI | GGWCC | 2 cut(s) | 1318, 2179 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 502, 1440, 1723, 2972 |
| SsiI | CCGC | 4 cut(s) | 20, 1105, 1591, 1658 |
| SspI | AATATT | 1 cut(s) | 1754 |
| SstI | GAGCTC | 1 cut(s) | 799 |
| StyD4I | CCNGG | 3 cut(s) | 132, 1300, 1940 |
| StyI | CCWWGG | 4 cut(s) | 235, 490, 1074, 1252 |
| TaiI | ACGT | 1 cut(s) | 700 |
| TaqI | TCGA | 5 cut(s) | 866, 1192, 1785, 1859, 2949 |
| TatI | WGTACW | 3 cut(s) | 113, 1648, 2492 |
| TauI | GCSGC | 1 cut(s) | 1108 |
| TfiI | GAWTC | 3 cut(s) | 2480, 2501, 2811 |
| Tru1I | TTAA | 9 cut(s) | 89, 366, 765, 1064, 1167, 1872, 2633, 2816, 2945 |
| Tru9I | TTAA | 9 cut(s) | 89, 366, 765, 1064, 1167, 1872, 2633, 2816, 2945 |
| TseFI | GTSAC | 3 cut(s) | 47, 94, 510 |
| TseI | GCWGC | 5 cut(s) | 72, 1022, 1660, 1832, 2209 |
| Tsp45I | GTSAC | 3 cut(s) | 47, 94, 510 |
| TspDTI | ATGAA | 8 cut(s) | 517, 953, 1178, 1899, 2230, 2400, 2453, 2762 |
| TspGWI | ACGGA | 2 cut(s) | 1380, 2889 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1097 |
| VpaK11BI | GGWCC | 2 cut(s) | 1318, 2179 |
| VspI | ATTAAT | 1 cut(s) | 2945 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2106 |
| XapI | RAATTY | 8 cut(s) | 617, 926, 1057, 1234, 2380, 2705, 2734, 3072 |
| XceI | RCATGY | 7 cut(s) | 207, 1439, 1692, 2081, 2097, 2320, 2459 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1091, 1098 |
| XmiI | GTMKAC | 1 cut(s) | 2098 |
| XmnI | GAANNNNTTC | 1 cut(s) | 183 |
| ZrmI | AGTACT | 1 cut(s) | 2494 |
| Zsp2I | ATGCAT | 3 cut(s) | 6, 661, 1269 |