Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001928

Physical Location & Seq

Genomic Coordinates Forward (+)

17857251 .. 17899112

Gene Structure 41862 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023084

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGGCTATGGAGAGGAAGAAGAGCGGCTCGTGGCGTCTGCAAAGTGGCCAATATCTCGGAGAAGTCTCAGCCCTGTGTTTCCTTCACCTACCTTCTCACCTGTCAATAAGGGAGCTTCCTTATTTAGTGGCCGGGTCCGGTTCGCAAATCTTGGTCTATGATTTGGAACTGGGAACACTGATGAGGTCGTTCGACGTTTTCCAAGGCATTCGCGTCCATGGGATTTGCTGCGGCGCTACTCATACAGATGTCCCTGAGGGAACCGTTGCTTTCGAAATCGCTGTGTTTGGGGAGAGGAGAGTCAAGGTGTTTAGATTGGAGATTCATTTGGGGCAGCAAGTCAGTGTTGGTTTGAGGCTGTTGCACTTGTTGCCCAACTTTGGGAATTGGGTCTTGGATGTTTCCTTCATCAAGCATGGGGAAGGTCAGTGTCTTGCTGTTGGGTCTAGTGACAACTCTGTCCATCTTTGGGATGTATCTGCTTCTACTGTGGTTCTTCAAGTTCAGCATCCTGAGAGGACTCTTCTGTATTCAATGCGGTTATGGGGTGAAACTCTTGAAGTTCTGCGCATTGCATCCGGTACTATCTATAATGAGATCATTGTTTGGAAAGTGGATCCTCAGTCTGATGATGCATCATGTTTGACAAGCCAAGTAGAACACCACATTGATCAAAGCAATTCACCCCCAAACGGTGCTCAGCTTCCTAATTGCCAGTATGAAGCTATTCATATTAGCAAACTTGCTGGACATGAAGGTTCGATTTTTCGCATATCGTGGTCCTCTGATGGATCAAAACTGGTTTCCGTATCTGACGATCGTAGTGCTCGTGTCTGGGCAGTTTGTACTCAAGCAATGCATTCTAAGAAGCCAGCGGACTCCATTGGGCTTATGTTATTTGGTCACAGTGCCCGAGTTTGGGACTGCTGCATTTTTGGATCGTTAATTGTCACAGCTGATGAGGATTGTACTTGTCGTGTGTGGGGTCTGGGTGGTCAACACCTGGAGACAATCAAGAAGCACACAGGAATGGGCATATGGCGATGTTTGTATGATCCGAAATCTTCGCTTCTAATTACTGCTGGCTTTGACTCTGCAATTAAAGTGCATCAGCTGCACATTCCATTGTCTGGGCGATTAAAGCGACATGCAGAGAGAAAACAAATCGATGGAATAGTTACATACACAACTCGTATCCCTACTTTATCTGAGAATATTGAACCTATGGACAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0007049 GO:0007050 GO:0008150 GO:0008285 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010506 GO:0010507 GO:0016020 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0042127 GO:0044424 GO:0044444 GO:0044464 GO:0045786 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

412

Amino Acids

45.55

Weight (kDa)

6.46

Isoelectric Point (pI)

35.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	244 - 286	6.9e-07	WDR5 beta-propeller domain
WD40	PF00400	245 - 279	1.5e-06	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	246 - 371	4.4e-13	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	251 - 370	1.2e-10	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	301 - 372	8.3e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001928)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01860 AT4G01860
fragaria_vesca	FvH4_1g26470 FvH4_2g08080
malus_domestica	MD09G1293000.v1.1 MD17G1281300.v1.1 MD17G1281400.v1.1 MD17G1281500.v1.1 MD17G1281700.v1.1 MD17G1281800.v1.1
prunus_persica	Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1 Prupe.3G004200_v2.0.a1
pyrus_communis	pycom09g19610 pycom09g19620 pycom09g19630 pycom17g27900
rosa_chinensis	RchiOBHm_Chr3g0486381 RchiOBHm_Chr3g0486491 RchiOBHm_Chr3g0486501 RchiOBHm_Chr3g0486511
rosa_laevigata	RLG00000023079 RLG00000023084 RLG00000023086 RLG00000023087
rosa_multiflora	Rmu_sc0001857.1_g000004 Rmu_sc0003801.1_g000001 Rmu_sc0003801.1_g000026 Rmu_sc0011408.1_g000006
rosa_roxburghii	Rroxscaffold_1G00022380 Rroxscaffold_3G00237910 Rroxscaffold_3G00237930 Rroxscaffold_3G00237990 Rroxscaffold_6G00395820
rosa_rugosa	Rorug03G0224900
rosa_samantha	Rh3AG274900 Rh3BG310000 Rh3CG309200 Rh3DG305300 Rh3DG306000
rosa_wichuraiana	Rw3G024390 Rw3G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	458
Acc16I	TGCGCA	1 cut(s)	569
AccB7I	CCANNNNNTGG	1 cut(s)	1130
AccBSI	CCGCTC	1 cut(s)	24
AccII	CGCG	1 cut(s)	213
AciI	CCGC	4 cut(s)	24, 231, 538, 875
AclWI	GGATC	5 cut(s)	611, 624, 799, 946, 1049
AcoI	YGGCCR	2 cut(s)	46, 129
AcyI	GRCGYC	1 cut(s)	34
AfaI	GTAC	3 cut(s)	583, 847, 970
AfiI	CCNNNNNNNGG	7 cut(s)	380, 381, 469, 692, 918, 919, 1130
AgsI	TTSAA	4 cut(s)	500, 534, 560, 1220
AjnI	CCWGG	1 cut(s)	1002
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AluBI	AGCT	6 cut(s)	115, 703, 725, 956, 1114, 1233
AluI	AGCT	6 cut(s)	115, 703, 725, 956, 1114, 1233
Alw21I	GWGCWC	2 cut(s)	700, 829
Alw26I	GTCTC	2 cut(s)	70, 1001
AlwI	GGATC	5 cut(s)	611, 624, 799, 946, 1049
Ama87I	CYCGRG	1 cut(s)	912
AoxI	GGCC	2 cut(s)	46, 129
ApeKI	GCWGC	4 cut(s)	228, 334, 927, 1114
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	2 cut(s)	236, 570
AspS9I	GGNCC	2 cut(s)	135, 780
AsuC2I	CCSGG	1 cut(s)	133
AsuHPI	GGTGA	4 cut(s)	77, 89, 560, 675
AsuII	TTCGAA	1 cut(s)	273
AvaI	CYCGRG	1 cut(s)	912
AvaII	GGWCC	2 cut(s)	135, 780
AxyI	CCTNAGG	1 cut(s)	255
BaeGI	GKGCMC	1 cut(s)	913
BalI	TGGCCA	1 cut(s)	48
BamHI	GGATCC	1 cut(s)	616
BauI	CACGAG	2 cut(s)	28, 828
Bbv12I	GWGCWC	2 cut(s)	700, 829
BbvI	GCAGC	4 cut(s)	215, 346, 914, 1101
BccI	CCATC	3 cut(s)	471, 782, 1163
BcgI	CGANNNNNNTGC	2 cut(s)	806, 840
BciT130I	CCWGG	1 cut(s)	1004
BciVI	GTATCC	1 cut(s)	1205
BclI	TGATCA	1 cut(s)	670
BcnI	CCSGG	1 cut(s)	133
BcoDI	GTCTC	2 cut(s)	70, 1001
BfaI	CTAG	1 cut(s)	447
BfoI	RGCGCY	1 cut(s)	237
BfuI	GTATCC	1 cut(s)	1205
BisI	GCNGC	6 cut(s)	25, 229, 232, 335, 928, 1115
BlpI	GCTNAGC	1 cut(s)	699
BlsI	GCNGC	6 cut(s)	26, 230, 233, 336, 929, 1116
Bme1390I	CCNGG	2 cut(s)	133, 1004
Bme18I	GGWCC	2 cut(s)	135, 780
BmeT110I	CYCGRG	1 cut(s)	912
BmgT120I	GGNCC	2 cut(s)	135, 780
BmiI	GGNNCC	3 cut(s)	136, 262, 618
BmrFI	CCNGG	2 cut(s)	133, 1004
BmrI	ACTGGG	1 cut(s)	179
BmsI	GCATC	5 cut(s)	517, 584, 622, 644, 1117
BmuI	ACTGGG	1 cut(s)	179
BpmI	CTGGAG	1 cut(s)	1025
Bpu1102I	GCTNAGC	1 cut(s)	699
Bpu14I	TTCGAA	1 cut(s)	273
BpuEI	CTTGAG	1 cut(s)	834
BpuMI	CCSGG	1 cut(s)	133
Bsa29I	ATCGAT	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	34
BsaJI	CCNNGG	2 cut(s)	202, 217
BsaWI	WCCGGW	2 cut(s)	137, 578
Bsc4I	CCNNNNNNNGG	7 cut(s)	380, 381, 469, 692, 918, 919, 1130
Bse1I	ACTGG	3 cut(s)	174, 715, 804
Bse21I	CCTNAGG	1 cut(s)	255
Bse3DI	GCAATG	2 cut(s)	570, 861
BseBI	CCWGG	1 cut(s)	1004
BseCI	ATCGAT	1 cut(s)	1167
BseDI	CCNNGG	2 cut(s)	202, 217
BseGI	GGATG	4 cut(s)	403, 478, 508, 575
BseLI	CCNNNNNNNGG	7 cut(s)	380, 381, 469, 692, 918, 919, 1130
BseMI	GCAATG	2 cut(s)	570, 861
BseMII	CTCAG	6 cut(s)	81, 246, 504, 635, 713, 1200
BseNI	ACTGG	3 cut(s)	174, 715, 804
BseRI	GAGGAG	1 cut(s)	310
BseSI	GKGCMC	1 cut(s)	913
BseXI	GCAGC	4 cut(s)	215, 346, 914, 1101
BsgI	GTGCAG	1 cut(s)	1100
Bsh1236I	CGCG	1 cut(s)	213
Bsh1285I	CGRYCG	1 cut(s)	820
BshFI	GGCC	2 cut(s)	48, 131
BshVI	ATCGAT	1 cut(s)	1167
BsiEI	CGRYCG	1 cut(s)	820
BsiHKAI	GWGCWC	2 cut(s)	700, 829
BsiHKCI	CYCGRG	1 cut(s)	912
BsiSI	CCGG	3 cut(s)	132, 138, 579
BslFI	GGGAC	2 cut(s)	236, 935
BslI	CCNNNNNNNGG	7 cut(s)	380, 381, 469, 692, 918, 919, 1130
BsmAI	GTCTC	2 cut(s)	70, 1001
BsmFI	GGGAC	2 cut(s)	236, 935
BsmI	GAATGC	2 cut(s)	207, 859
BsnI	GGCC	2 cut(s)	48, 131
BsoBI	CYCGRG	1 cut(s)	912
Bsp119I	TTCGAA	1 cut(s)	273
Bsp1286I	GDGCHC	3 cut(s)	700, 829, 913
Bsp143I	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
Bsp1720I	GCTNAGC	1 cut(s)	699
Bsp19I	CCATGG	1 cut(s)	217
BspACI	CCGC	4 cut(s)	24, 231, 538, 875
BspANI	GGCC	2 cut(s)	48, 131
BspCNI	CTCAG	6 cut(s)	80, 247, 505, 634, 712, 1201
BspDI	ATCGAT	1 cut(s)	1167
BspFNI	CGCG	1 cut(s)	213
BspLI	GGNNCC	3 cut(s)	136, 262, 618
BspPI	GGATC	5 cut(s)	611, 624, 799, 946, 1049
BspQI	GCTCTTC	1 cut(s)	14
BspT104I	TTCGAA	1 cut(s)	273
BsrBI	CCGCTC	1 cut(s)	24
BsrDI	GCAATG	2 cut(s)	570, 861
BsrI	ACTGG	3 cut(s)	174, 715, 804
BssECI	CCNNGG	2 cut(s)	202, 217
BssMI	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
BssNI	GRCGYC	1 cut(s)	34
BssSI	CACGAG	2 cut(s)	28, 828
BssT1I	CCWWGG	2 cut(s)	202, 217
Bst2BI	CACGAG	2 cut(s)	28, 828
Bst2UI	CCWGG	1 cut(s)	1004
Bst4CI	ACNGT	4 cut(s)	265, 490, 695, 908
Bst6I	CTCTTC	2 cut(s)	14, 528
BstACI	GRCGYC	1 cut(s)	34
BstAPI	GCANNNNNTGC	2 cut(s)	370, 1114
BstBI	TTCGAA	1 cut(s)	273
BstC8I	GCNNGC	2 cut(s)	873, 1084
BstDEI	CTNAG	7 cut(s)	67, 255, 513, 621, 699, 864, 1209
BstDSI	CCRYGG	1 cut(s)	217
BstF5I	GGATG	4 cut(s)	403, 478, 508, 575
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	2 cut(s)	236, 570
BstKTI	GATC	7 cut(s)	600, 619, 673, 794, 820, 941, 1057
BstMAI	GTCTC	2 cut(s)	70, 1001
BstMBI	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
BstMCI	CGRYCG	1 cut(s)	820
BstMWI	GCNNNNNNNGC	3 cut(s)	370, 1114, 1141
BstNI	CCWGG	1 cut(s)	1004
BstNSI	RCATGY	1 cut(s)	1151
BstSCI	CCNGG	2 cut(s)	131, 1002
BstSLI	GKGCMC	1 cut(s)	913
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	4 cut(s)	215, 346, 914, 1101
BstX2I	RGATCY	1 cut(s)	616
BstYI	RGATCY	1 cut(s)	616
Bsu15I	ATCGAT	1 cut(s)	1167
Bsu36I	CCTNAGG	1 cut(s)	255
BsuI	GTATCC	1 cut(s)	1205
BsuRI	GGCC	2 cut(s)	48, 131
BsuTUI	ATCGAT	1 cut(s)	1167
BtgI	CCRYGG	1 cut(s)	217
BtgZI	GCGATG	1 cut(s)	1057
BtsCI	GGATG	4 cut(s)	403, 478, 508, 575
BtsIMutI	CAGTG	4 cut(s)	176, 349, 434, 913
Cac8I	GCNNGC	2 cut(s)	873, 1084
CfoI	GCGC	2 cut(s)	236, 570
Cfr13I	GGNCC	2 cut(s)	135, 780
ClaI	ATCGAT	1 cut(s)	1167
CseI	GACGC	2 cut(s)	23, 202
Csp6I	GTAC	3 cut(s)	582, 846, 969
CviAII	CATG	5 cut(s)	218, 416, 639, 752, 1148
CviQI	GTAC	3 cut(s)	582, 846, 969
DdeI	CTNAG	7 cut(s)	67, 255, 513, 621, 699, 864, 1209
DpnI	GATC	7 cut(s)	599, 618, 672, 793, 819, 940, 1056
DpnII	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
DrdI	GACNNNNNNGTC	1 cut(s)	458
DseDI	GACNNNNNNGTC	1 cut(s)	458
EaeI	YGGCCR	2 cut(s)	46, 129
Eam1104I	CTCTTC	2 cut(s)	14, 528
EarI	CTCTTC	2 cut(s)	14, 528
Eco130I	CCWWGG	2 cut(s)	202, 217
Eco47I	GGWCC	2 cut(s)	135, 780
Eco81I	CCTNAGG	1 cut(s)	255
Eco88I	CYCGRG	1 cut(s)	912
EcoRII	CCWGG	1 cut(s)	1002
EcoT14I	CCWWGG	2 cut(s)	202, 217
EcoT22I	ATGCAT	2 cut(s)	637, 861
ErhI	CCWWGG	2 cut(s)	202, 217
FaeI	CATG	5 cut(s)	221, 419, 642, 755, 1151
FaqI	GGGAC	2 cut(s)	236, 935
FatI	CATG	5 cut(s)	217, 415, 638, 751, 1147
FauNDI	CATATG	1 cut(s)	1037
FbaI	TGATCA	1 cut(s)	670
Fnu4HI	GCNGC	6 cut(s)	25, 229, 232, 335, 928, 1115
FokI	GGATG	4 cut(s)	410, 485, 495, 562
Fsp4HI	GCNGC	6 cut(s)	25, 229, 232, 335, 928, 1115
FspBI	CTAG	1 cut(s)	447
FspI	TGCGCA	1 cut(s)	569
GlaI	GCGC	2 cut(s)	235, 569
GluI	GCNGC	6 cut(s)	25, 229, 232, 335, 928, 1115
GsuI	CTGGAG	1 cut(s)	1025
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	2 cut(s)	48, 131
HapII	CCGG	3 cut(s)	132, 138, 579
HgaI	GACGC	2 cut(s)	23, 202
HhaI	GCGC	2 cut(s)	236, 570
Hin1I	GRCGYC	1 cut(s)	34
Hin1II	CATG	5 cut(s)	221, 419, 642, 755, 1151
Hin6I	GCGC	2 cut(s)	234, 568
HinP1I	GCGC	2 cut(s)	234, 568
HincII	GTYRAC	1 cut(s)	998
HindII	GTYRAC	1 cut(s)	998
HinfI	GANTC	5 cut(s)	300, 322, 520, 878, 1091
HpaII	CCGG	3 cut(s)	132, 138, 579
HphI	GGTGA	4 cut(s)	77, 89, 560, 675
Hpy166II	GTNNAC	1 cut(s)	998
Hpy188I	TCNGA	6 cut(s)	59, 628, 787, 814, 1059, 1210
Hpy188III	TCNNGA	3 cut(s)	512, 557, 1015
Hpy8I	GTNNAC	1 cut(s)	998
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	5 cut(s)	92, 102, 415, 416, 749
HpyCH4III	ACNGT	4 cut(s)	265, 490, 695, 908
HpyCH4IV	ACGT	1 cut(s)	195
HpyF10VI	GCNNNNNNNGC	3 cut(s)	370, 1114, 1141
HpyF3I	CTNAG	7 cut(s)	67, 255, 513, 621, 699, 864, 1209
HpySE526I	ACGT	1 cut(s)	195
Hsp92I	GRCGYC	1 cut(s)	34
Hsp92II	CATG	5 cut(s)	221, 419, 642, 755, 1151
HspAI	GCGC	2 cut(s)	234, 568
Ksp22I	TGATCA	1 cut(s)	670
Kzo9I	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
LguI	GCTCTTC	1 cut(s)	14
LmnI	GCTCC	1 cut(s)	112
Lsp1109I	GCAGC	4 cut(s)	215, 346, 914, 1101
LweI	GCATC	5 cut(s)	517, 584, 622, 644, 1117
MaeI	CTAG	1 cut(s)	447
MaeII	ACGT	1 cut(s)	195
MaeIII	GTNAC	4 cut(s)	449, 902, 949, 1177
MalI	GATC	7 cut(s)	599, 618, 672, 793, 819, 940, 1056
MbiI	CCGCTC	1 cut(s)	24
MboI	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
MboII	GAAGA	5 cut(s)	28, 31, 488, 515, 1056
MflI	RGATCY	1 cut(s)	616
MhlI	GDGCHC	3 cut(s)	700, 829, 913
MlsI	TGGCCA	1 cut(s)	48
MluCI	AATT	6 cut(s)	385, 679, 709, 945, 1074, 1098
MluNI	TGGCCA	1 cut(s)	48
MlyI	GAGTC	4 cut(s)	309, 514, 872, 1085
MnlI	CCTC	9 cut(s)	6, 177, 250, 288, 348, 510, 630, 793, 955
Mox20I	TGGCCA	1 cut(s)	48
Mph1103I	ATGCAT	2 cut(s)	637, 861
MroXI	GAANNNNTTC	1 cut(s)	726
MscI	TGGCCA	1 cut(s)	48
MseI	TTAA	3 cut(s)	944, 1101, 1139
MslI	CAYNNNNRTG	2 cut(s)	246, 1028
Msp20I	TGGCCA	1 cut(s)	48
MspA1I	CMGCKG	3 cut(s)	875, 956, 1114
MspI	CCGG	3 cut(s)	132, 138, 579
MspR9I	CCNGG	2 cut(s)	133, 1004
Mva1269I	GAATGC	2 cut(s)	207, 859
MvaI	CCWGG	1 cut(s)	1004
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	3 cut(s)	370, 1114, 1141
NciI	CCSGG	1 cut(s)	133
NcoI	CCATGG	1 cut(s)	217
NdeI	CATATG	1 cut(s)	1037
NdeII	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
NlaIII	CATG	5 cut(s)	221, 419, 642, 755, 1151
NlaIV	GGNNCC	3 cut(s)	136, 262, 618
NmuCI	GTSAC	3 cut(s)	449, 902, 949
NsbI	TGCGCA	1 cut(s)	569
NsiI	ATGCAT	2 cut(s)	637, 861
NspI	RCATGY	1 cut(s)	1151
NspV	TTCGAA	1 cut(s)	273
PciSI	GCTCTTC	1 cut(s)	14
PcsI	WCGNNNNNNNCGW	1 cut(s)	826
PctI	GAATGC	2 cut(s)	207, 859
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	1 cut(s)	322
PflMI	CCANNNNNTGG	1 cut(s)	1130
PkrI	GCNGC	6 cut(s)	26, 230, 233, 336, 929, 1116
Ple19I	CGATCG	1 cut(s)	820
PleI	GAGTC	4 cut(s)	308, 514, 872, 1085
PpsI	GAGTC	4 cut(s)	308, 514, 872, 1085
Psp6I	CCWGG	1 cut(s)	1002
PspGI	CCWGG	1 cut(s)	1002
PspN4I	GGNNCC	3 cut(s)	136, 262, 618
PspPI	GGNCC	2 cut(s)	135, 780
PsuI	RGATCY	1 cut(s)	616
PvuI	CGATCG	1 cut(s)	820
PvuII	CAGCTG	2 cut(s)	956, 1114
RsaI	GTAC	3 cut(s)	583, 847, 970
RsaNI	GTAC	3 cut(s)	582, 846, 969
RseI	CAYNNNNRTG	2 cut(s)	246, 1028
SapI	GCTCTTC	1 cut(s)	14
SaqAI	TTAA	3 cut(s)	944, 1101, 1139
SatI	GCNGC	6 cut(s)	25, 229, 232, 335, 928, 1115
Sau3AI	GATC	7 cut(s)	597, 616, 670, 791, 817, 938, 1054
Sau96I	GGNCC	2 cut(s)	135, 780
SchI	GAGTC	4 cut(s)	309, 514, 872, 1085
ScrFI	CCNGG	2 cut(s)	133, 1004
SduI	GDGCHC	3 cut(s)	700, 829, 913
SfaNI	GCATC	5 cut(s)	517, 584, 622, 644, 1117
SfuI	TTCGAA	1 cut(s)	273
SinI	GGWCC	2 cut(s)	135, 780
SmiMI	CAYNNNNRTG	2 cut(s)	246, 1028
SmlI	CTYRAG	1 cut(s)	849
SmoI	CTYRAG	1 cut(s)	849
Sse9I	AATT	6 cut(s)	385, 679, 709, 945, 1074, 1098
SsiI	CCGC	4 cut(s)	24, 231, 538, 875
SspI	AATATT	1 cut(s)	1216
SspMI	CTAG	1 cut(s)	447
StyD4I	CCNGG	2 cut(s)	131, 1002
StyI	CCWWGG	2 cut(s)	202, 217
TaaI	ACNGT	4 cut(s)	265, 490, 695, 908
TaiI	ACGT	1 cut(s)	198
TaqI	TCGA	4 cut(s)	192, 273, 761, 1167
TasI	AATT	6 cut(s)	385, 679, 709, 945, 1074, 1098
TatI	WGTACW	2 cut(s)	845, 968
TauI	GCSGC	2 cut(s)	27, 234
TfiI	GAWTC	1 cut(s)	322
Tru1I	TTAA	3 cut(s)	944, 1101, 1139
Tru9I	TTAA	3 cut(s)	944, 1101, 1139
TscAI	CASTG	4 cut(s)	183, 349, 434, 913
TseFI	GTSAC	3 cut(s)	449, 902, 949
TseI	GCWGC	4 cut(s)	228, 334, 927, 1114
Tsp45I	GTSAC	3 cut(s)	449, 902, 949
TspDTI	ATGAA	5 cut(s)	314, 397, 719, 735, 768
TspGWI	ACGGA	1 cut(s)	796
TspRI	CASTG	4 cut(s)	183, 349, 434, 913
Van91I	CCANNNNNTGG	1 cut(s)	1130
VpaK11BI	GGWCC	2 cut(s)	135, 780
XceI	RCATGY	1 cut(s)	1151
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	1 cut(s)	447
Zsp2I	ATGCAT	2 cut(s)	637, 861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.