FvH4_2g04550

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0001292
Physical Location & Seq
Forward (+)
3505937 .. 3507932
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04550.t1

Sequence Viewer

Length: 1896 bp
ATGATTTCCTGCAATTCTCCGGCGTTTTCTTGTCTCCGAGGGCCACCGGTGCTTTACCGCCCTAAAAAGCCCTCCAAAGAAAACCCTATCTTAACCTATGCAGACCTTCAGCTTGGTCAAGACCTCAAATCTTCCCCGCTCCCACCCTTGAACCGTTTCCTCAAGTTCTTCTTCGAAGTCATCACTCACACCGAAACACACCCCTCAAAAGAACTAGGTCATCTACCCCAAGTTTTTTGCCCCAGCTGGAAGCTGGACCCTCTCATCACTCTGAAGCTCATATTTTGTTTTAGAATATTGGGGCAGCCTAACAAAGAAGGGTTTTATAAAGCCGTCCTCTTTCTCCACAAATTCCACCCCAAAACCCTAGCCTTGAATCTAATGATTTTTAGGGATTTGGAATGGTTCGAAGATTTATTGGAGATTCTTAATAGGGTTTTGGAGGACTCCATTGATACATTTGCAACCGAAAAGAGGGCAAGGGATAGACCACAGTATGGCAGGAATTATGGCAAGAAAAAAGAGAAGACACAAGTTGAAGAACTACTGGAAAGAACAGATGAACTTTCAAAGACGACAATAGCAATCATGAGGTACCAAAACGACGATGCTTACCGGTACTTGCACGACCGGATATCTGAGTTGTTTGCTGAGAGTTTAAAATCAGATCTCAGTCTGATGGAGTCGGATGAGATTGAAAAAATTAGCTATGCTTCCAAATTTTGTCCTTCAATTGATTCTGCATACGATAAAGCAACCCTCATCTGTGAAAACATAGCAAAGAAGATCTTCCCGCGATGTGGTTATGCCGAATACAGAGATCTTAAAGAAGCTGATTACCCTTGTAGGGTTCGTGATCGTCTGCAGGAACATGTATTAATTCCTCTACGTAAAGCGATTGGATCACAGAAGATGAAGAAGTCATCAATGGAAACCGGTAAGGCGCTGATTGCTCTGGAAACATATAGGAAGATTTTCAGACCTGAGGGTGACAATGTAAGCAACTTAGGATTGTTTAAGCATTACATGAATATGATTCACATCATGTCACCAAAGGAGAATAATGATATGTTAGACTTTGGCGACGGAATTAAACTCCCTACCCAAATAATAGCTTCGTTGTTGAACAAGGAAAGTACTGCAGAGCTTGAATGGAGGAGGCTAGTCCAAGAGTTTTCAAGCCAAGGAAAGCTACTAAATTGTGTTGCAGTGTGTGACATTTCGCCTAGCATGACAGGGACATTCAAGGAGACGGCTTGTGTTTCAATGGGGTTATTGATTTCGGAATTGAGTGGAAACCCATGGAAAGGAAGAGTTTTCTCCTTCAACGAGTTTCCCAACTTGTACAATGTTGAAGGAGATAATCTTCGATCCAAATGCGAGTTCATGAGGCAAATAGAGTGCACCGAGAAACTAAGTTTTGCATCGATTTACGACCAGCTTTTGCAGATTGCCATCACAGAAAAGCTCAGCAAGACGAAGATGCCTAGAATGATCTTTGTTTTCACCTACAAAGATTTTGTGACTTCCTCCAAAAACAACTGGGTGCAGGATTACAAAGAGGCTTGGGATAATTACAGAAATAGAGGGTATTCAACTGTGCCACAGATAGTGTTTTGGAATCTGAAGGATCCAATTGCCGAGCCGGTTGTGTTTGGTAGCCCTGTGAAGAACCAGCATGGAGGAATGATTGTAACTGGATTTTCCAACGTCCTGCTCAAACTGTTCTTCAATGGACTTAAAGATTCAAGAACATATGCAGCTGCAGCAGCTCAATTCCGTGGATATTATGATTTTGATATAGTTTCAGTACTCAAATATGTTCCTAAGTTAGAGGATTTGATGGAATGTGCAATTTCTAGAGAGGATTTTAAGGACCTGCTTCTATTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

632

Amino Acids

72.93

Weight (kDa)

8.2

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 52 - 398 2e-50 Domain of unknown function (DUF2828)
DUF7788 PF25043 400 - 579 4.8e-41 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 327
Acc36I ACCTGC 1 cut(s) 1887
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 594
AccB7I CCANNNNNTGG 1 cut(s) 497
AccBSI CCGCTC 1 cut(s) 139
AccII CGCG 1 cut(s) 796
AciI CCGC 3 cut(s) 58, 137, 794
AclWI GGATC 4 cut(s) 910, 1365, 1625, 1638
AcsI RAATTY 2 cut(s) 350, 719
AcuI CTGAAG 3 cut(s) 92, 293, 1646
AfaI GTAC 5 cut(s) 596, 620, 1138, 1346, 1812
AfiI CCNNNNNNNGG 5 cut(s) 474, 497, 800, 847, 1307
AflIII ACRYGT 1 cut(s) 871
AgeI ACCGGT 3 cut(s) 46, 615, 935
AjuI GAANNNNNNNTTGG 2 cut(s) 1367, 1399
Alw21I GWGCWC 1 cut(s) 1406
Alw26I GTCTC 2 cut(s) 38, 1244
Alw44I GTGCAC 1 cut(s) 1402
AlwI GGATC 4 cut(s) 910, 1365, 1625, 1638
AoxI GGCC 1 cut(s) 41
ApaLI GTGCAC 1 cut(s) 1402
ApeKI GCWGC 5 cut(s) 304, 1760, 1763, 1766, 1769
ApoI RAATTY 2 cut(s) 350, 719
AseI ATTAAT 1 cut(s) 878
AsiGI ACCGGT 3 cut(s) 46, 615, 935
Asp700I GAANNNNTTC 3 cut(s) 155, 788, 974
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 1 cut(s) 946
AspS9I GGNCC 3 cut(s) 41, 256, 1876
AsuHPI GGTGA 3 cut(s) 1001, 1041, 1498
AsuII TTCGAA 2 cut(s) 174, 408
AvaII GGWCC 2 cut(s) 256, 1876
AxyI CCTNAGG 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 1406
BamHI GGATCC 1 cut(s) 1630
BanI GGYRCC 1 cut(s) 594
BbsI GAAGAC 1 cut(s) 533
Bbv12I GWGCWC 1 cut(s) 1406
BbvI GCAGC 5 cut(s) 316, 1750, 1772, 1778, 1781
BccI CCATC 3 cut(s) 673, 1463, 1837
BceAI ACGGC 2 cut(s) 317, 1269
BcgI CGANNNNNNTGC 2 cut(s) 1359, 1393
BcoDI GTCTC 2 cut(s) 38, 1244
BfaI CTAG 6 cut(s) 215, 368, 1163, 1227, 1488, 1860
BfmI CTRYAG 3 cut(s) 863, 1140, 1764
BfoI RGCGCY 1 cut(s) 947
BfuAI ACCTGC 1 cut(s) 1887
BglII AGATCT 3 cut(s) 667, 786, 820
BisI GCNGC 5 cut(s) 305, 1761, 1764, 1767, 1770
BlpI GCTNAGC 1 cut(s) 1469
BlsI GCNGC 5 cut(s) 306, 1762, 1765, 1768, 1771
BmcAI AGTACT 2 cut(s) 1138, 1812
Bme18I GGWCC 2 cut(s) 256, 1876
BmgT120I GGNCC 3 cut(s) 41, 256, 1876
BmiI GGNNCC 3 cut(s) 258, 596, 1632
BmrI ACTGGG 1 cut(s) 1552
BmsI GCATC 3 cut(s) 598, 1433, 1473
BmuI ACTGGG 1 cut(s) 1552
BpiI GAAGAC 1 cut(s) 533
Bpu1102I GCTNAGC 1 cut(s) 1469
Bpu14I TTCGAA 2 cut(s) 174, 408
BpuEI CTTGAG 1 cut(s) 146
Bsa29I ATCGAT 1 cut(s) 1427
BsaAI YACGTR 1 cut(s) 890
BsaBI GATNNNNATC 2 cut(s) 1040, 1454
BsaJI CCNNGG 4 cut(s) 37, 1183, 1301, 1780
BsaWI WCCGGW 4 cut(s) 46, 615, 630, 935
Bsc4I CCNNNNNNNGG 5 cut(s) 474, 497, 800, 847, 1307
Bse118I RCCGGY 4 cut(s) 46, 615, 935, 1645
Bse1I ACTGG 3 cut(s) 552, 1547, 1702
Bse21I CCTNAGG 1 cut(s) 984
Bse8I GATNNNNATC 2 cut(s) 1040, 1454
BseCI ATCGAT 1 cut(s) 1427
BseDI CCNNGG 4 cut(s) 37, 1183, 1301, 1780
BseGI GGATG 1 cut(s) 694
BseJI GATNNNNATC 2 cut(s) 1040, 1454
BseLI CCNNNNNNNGG 5 cut(s) 474, 497, 800, 847, 1307
BseMII CTCAG 5 cut(s) 630, 642, 685, 975, 1483
BseNI ACTGG 3 cut(s) 552, 1547, 1702
BseRI GAGGAG 1 cut(s) 1171
BseSI GKGCMC 1 cut(s) 1406
BseXI GCAGC 5 cut(s) 316, 1750, 1772, 1778, 1781
BseYI CCCAGC 1 cut(s) 242
BsgI GTGCAG 1 cut(s) 1568
Bsh1236I CGCG 1 cut(s) 796
Bsh1285I CGRYCG 1 cut(s) 631
BshFI GGCC 1 cut(s) 43
BshNI GGYRCC 1 cut(s) 594
BshTI ACCGGT 3 cut(s) 46, 615, 935
BshVI ATCGAT 1 cut(s) 1427
BsiEI CGRYCG 1 cut(s) 631
BsiHKAI GWGCWC 1 cut(s) 1406
BsiSI CCGG 6 cut(s) 20, 47, 616, 631, 936, 1646
BslFI GGGAC 1 cut(s) 1252
BslI CCNNNNNNNGG 5 cut(s) 474, 497, 800, 847, 1307
BsmAI GTCTC 2 cut(s) 38, 1244
BsmBI CGTCTC 1 cut(s) 1244
BsmFI GGGAC 1 cut(s) 1252
BsnI GGCC 1 cut(s) 43
Bsp119I TTCGAA 2 cut(s) 174, 408
Bsp1286I GDGCHC 1 cut(s) 1406
Bsp1407I TGTACA 1 cut(s) 1344
Bsp143I GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
Bsp1720I GCTNAGC 1 cut(s) 1469
Bsp19I CCATGG 1 cut(s) 1301
BspACI CCGC 3 cut(s) 58, 137, 794
BspANI GGCC 1 cut(s) 43
BspCNI CTCAG 5 cut(s) 631, 643, 684, 976, 1482
BspDI ATCGAT 1 cut(s) 1427
BspFNI CGCG 1 cut(s) 796
BspHI TCATGA 2 cut(s) 588, 1386
BspLI GGNNCC 3 cut(s) 258, 596, 1632
BspMAI CTGCAG 3 cut(s) 867, 1144, 1768
BspMI ACCTGC 1 cut(s) 1887
BspPI GGATC 4 cut(s) 910, 1365, 1625, 1638
BspT104I TTCGAA 2 cut(s) 174, 408
BspT107I GGYRCC 1 cut(s) 594
BsrBI CCGCTC 1 cut(s) 139
BsrFI RCCGGY 4 cut(s) 46, 615, 935, 1645
BsrGI TGTACA 1 cut(s) 1344
BsrI ACTGG 3 cut(s) 552, 1547, 1702
BssAI RCCGGY 4 cut(s) 46, 615, 935, 1645
BssECI CCNNGG 4 cut(s) 37, 1183, 1301, 1780
BssMI GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
BssT1I CCWWGG 2 cut(s) 1183, 1301
Bst4CI ACNGT 4 cut(s) 155, 495, 1600, 1725
Bst6I CTCTTC 1 cut(s) 1306
BstAUI TGTACA 1 cut(s) 1344
BstBAI YACGTR 1 cut(s) 890
BstBI TTCGAA 2 cut(s) 174, 408
BstDEI CTNAG 8 cut(s) 639, 651, 671, 984, 1006, 1415, 1469, 1827
BstDSI CCRYGG 2 cut(s) 1301, 1780
BstF5I GGATG 1 cut(s) 694
BstFNI CGCG 1 cut(s) 796
BstH2I RGCGCY 1 cut(s) 947
BstHHI GCGC 1 cut(s) 946
BstKTI GATC 8 cut(s) 670, 789, 823, 859, 905, 1373, 1497, 1633
BstMAI GTCTC 2 cut(s) 38, 1244
BstMBI GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
BstMCI CGRYCG 1 cut(s) 631
BstMWI GCNNNNNNNGC 4 cut(s) 49, 950, 1766, 1769
BstNSI RCATGY 1 cut(s) 875
BstSFI CTRYAG 3 cut(s) 863, 1140, 1764
BstSLI GKGCMC 1 cut(s) 1406
BstSNI TACGTA 1 cut(s) 890
BstUI CGCG 1 cut(s) 796
BstV1I GCAGC 5 cut(s) 316, 1750, 1772, 1778, 1781
BstV2I GAAGAC 1 cut(s) 533
BstX2I RGATCY 4 cut(s) 667, 786, 820, 1630
BstYI RGATCY 4 cut(s) 667, 786, 820, 1630
Bsu15I ATCGAT 1 cut(s) 1427
Bsu36I CCTNAGG 1 cut(s) 984
BsuRI GGCC 1 cut(s) 43
BsuTUI ATCGAT 1 cut(s) 1427
BtgI CCRYGG 2 cut(s) 1301, 1780
BtgZI GCGATG 1 cut(s) 811
BtsCI GGATG 1 cut(s) 694
BtsI GCAGTG 1 cut(s) 1215
BtsIMutI CAGTG 1 cut(s) 1215
BveI ACCTGC 1 cut(s) 1887
CciI TCATGA 2 cut(s) 588, 1386
CfoI GCGC 1 cut(s) 946
Cfr10I RCCGGY 4 cut(s) 46, 615, 935, 1645
Cfr13I GGNCC 3 cut(s) 41, 256, 1876
ClaI ATCGAT 1 cut(s) 1427
Csp6I GTAC 5 cut(s) 595, 619, 1137, 1345, 1811
CspAI ACCGGT 3 cut(s) 46, 615, 935
CviAII CATG 8 cut(s) 589, 872, 1027, 1045, 1231, 1302, 1387, 1679
CviQI GTAC 5 cut(s) 595, 619, 1137, 1345, 1811
DdeI CTNAG 8 cut(s) 639, 651, 671, 984, 1006, 1415, 1469, 1827
DpnI GATC 8 cut(s) 669, 788, 822, 858, 904, 1372, 1496, 1632
DpnII GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
DraI TTTAAA 1 cut(s) 660
Eam1104I CTCTTC 1 cut(s) 1306
EarI CTCTTC 1 cut(s) 1306
Eco105I TACGTA 1 cut(s) 890
Eco130I CCWWGG 2 cut(s) 1183, 1301
Eco32I GATATC 1 cut(s) 636
Eco47I GGWCC 2 cut(s) 256, 1876
Eco57I CTGAAG 3 cut(s) 92, 293, 1646
Eco81I CCTNAGG 1 cut(s) 984
EcoO109I RGGNCCY 1 cut(s) 1876
EcoRV GATATC 1 cut(s) 636
EcoT14I CCWWGG 2 cut(s) 1183, 1301
ErhI CCWWGG 2 cut(s) 1183, 1301
Esp3I CGTCTC 1 cut(s) 1244
FaeI CATG 8 cut(s) 592, 875, 1030, 1048, 1234, 1305, 1390, 1682
FalI AAGNNNNNCTT 4 cut(s) 155, 187, 773, 805
FaqI GGGAC 1 cut(s) 1252
FatI CATG 8 cut(s) 588, 871, 1026, 1044, 1230, 1301, 1386, 1678
FauI CCCGC 2 cut(s) 144, 801
FauNDI CATATG 1 cut(s) 1756
Fnu4HI GCNGC 5 cut(s) 305, 1761, 1764, 1767, 1770
FokI GGATG 1 cut(s) 701
Fsp4HI GCNGC 5 cut(s) 305, 1761, 1764, 1767, 1770
FspBI CTAG 6 cut(s) 215, 368, 1163, 1227, 1488, 1860
GlaI GCGC 1 cut(s) 945
GluI GCNGC 5 cut(s) 305, 1761, 1764, 1767, 1770
GsaI CCCAGC 1 cut(s) 246
HaeII RGCGCY 1 cut(s) 947
HaeIII GGCC 1 cut(s) 43
HapII CCGG 6 cut(s) 20, 47, 616, 631, 936, 1646
HhaI GCGC 1 cut(s) 946
Hin1II CATG 8 cut(s) 592, 875, 1030, 1048, 1234, 1305, 1390, 1682
Hin6I GCGC 1 cut(s) 944
HinP1I GCGC 1 cut(s) 944
HinfI GANTC 8 cut(s) 376, 424, 446, 683, 737, 1036, 1621, 1745
HpaII CCGG 6 cut(s) 20, 47, 616, 631, 936, 1646
HphI GGTGA 3 cut(s) 1001, 1041, 1498
Hpy166II GTNNAC 1 cut(s) 1404
Hpy188I TCNGA 9 cut(s) 38, 273, 640, 667, 678, 688, 980, 1285, 1626
Hpy188III TCNNGA 7 cut(s) 119, 589, 854, 956, 1387, 1749, 1860
Hpy8I GTNNAC 1 cut(s) 1404
Hpy99I CGWCG 2 cut(s) 608, 1088
HpyAV CCTTC 6 cut(s) 116, 311, 738, 1333, 1349, 1621
HpyCH4III ACNGT 4 cut(s) 155, 495, 1600, 1725
HpyCH4IV ACGT 2 cut(s) 889, 1710
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 950, 1766, 1769
HpyF3I CTNAG 8 cut(s) 639, 651, 671, 984, 1006, 1415, 1469, 1827
HpySE526I ACGT 2 cut(s) 889, 1710
Hsp92II CATG 8 cut(s) 592, 875, 1030, 1048, 1234, 1305, 1390, 1682
HspAI GCGC 1 cut(s) 944
KpnI GGTACC 1 cut(s) 598
Kzo9I GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
LmnI GCTCC 1 cut(s) 144
Lsp1109I GCAGC 5 cut(s) 316, 1750, 1772, 1778, 1781
LweI GCATC 3 cut(s) 598, 1433, 1473
MaeI CTAG 6 cut(s) 215, 368, 1163, 1227, 1488, 1860
MaeII ACGT 2 cut(s) 889, 1710
MaeIII GTNAC 5 cut(s) 989, 1047, 1214, 1522, 1693
MalI GATC 8 cut(s) 669, 788, 822, 858, 904, 1372, 1496, 1632
MbiI CCGCTC 1 cut(s) 139
MboI GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
MfeI CAATTG 2 cut(s) 732, 1635
MflI RGATCY 4 cut(s) 667, 786, 820, 1630
MhlI GDGCHC 1 cut(s) 1406
MlyI GAGTC 2 cut(s) 440, 692
MmeI TCCRAC 2 cut(s) 666, 1731
MroXI GAANNNNTTC 3 cut(s) 155, 788, 974
MseI TTAA 9 cut(s) 92, 429, 659, 825, 878, 1017, 1092, 1740, 1872
MslI CAYNNNNRTG 1 cut(s) 1031
MspA1I CMGCKG 2 cut(s) 246, 1763
MspI CCGG 6 cut(s) 20, 47, 616, 631, 936, 1646
MunI CAATTG 2 cut(s) 732, 1635
MvnI CGCG 1 cut(s) 796
MwoI GCNNNNNNNGC 4 cut(s) 49, 950, 1766, 1769
NcoI CCATGG 1 cut(s) 1301
NdeI CATATG 1 cut(s) 1756
NdeII GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
NlaIII CATG 8 cut(s) 592, 875, 1030, 1048, 1234, 1305, 1390, 1682
NlaIV GGNNCC 3 cut(s) 258, 596, 1632
NmeAIII GCCGAG 1 cut(s) 1666
NmuCI GTSAC 4 cut(s) 989, 1047, 1214, 1522
NspI RCATGY 1 cut(s) 875
NspV TTCGAA 2 cut(s) 174, 408
PagI TCATGA 2 cut(s) 588, 1386
PciI ACATGT 1 cut(s) 871
PdmI GAANNNNTTC 3 cut(s) 155, 788, 974
PfeI GAWTC 6 cut(s) 376, 424, 737, 1036, 1621, 1745
PflMI CCANNNNNTGG 1 cut(s) 497
PinAI ACCGGT 3 cut(s) 46, 615, 935
PkrI GCNGC 5 cut(s) 306, 1762, 1765, 1768, 1771
PleI GAGTC 2 cut(s) 440, 691
PpsI GAGTC 2 cut(s) 440, 691
Ppu21I YACGTR 1 cut(s) 890
PpuMI RGGWCCY 1 cut(s) 1876
PscI ACATGT 1 cut(s) 871
PshBI ATTAAT 1 cut(s) 878
PsiI TTATAA 1 cut(s) 327
Psp5II RGGWCCY 1 cut(s) 1876
PspFI CCCAGC 1 cut(s) 242
PspN4I GGNNCC 3 cut(s) 258, 596, 1632
PspPI GGNCC 3 cut(s) 41, 256, 1876
PspPPI RGGWCCY 1 cut(s) 1876
PstI CTGCAG 3 cut(s) 867, 1144, 1768
PsuI RGATCY 4 cut(s) 667, 786, 820, 1630
PvuII CAGCTG 2 cut(s) 246, 1763
RsaI GTAC 5 cut(s) 596, 620, 1138, 1346, 1812
RsaNI GTAC 5 cut(s) 595, 619, 1137, 1345, 1811
RseI CAYNNNNRTG 1 cut(s) 1031
SaqAI TTAA 9 cut(s) 92, 429, 659, 825, 878, 1017, 1092, 1740, 1872
SatI GCNGC 5 cut(s) 305, 1761, 1764, 1767, 1770
Sau3AI GATC 8 cut(s) 667, 786, 820, 856, 902, 1370, 1494, 1630
Sau96I GGNCC 3 cut(s) 41, 256, 1876
ScaI AGTACT 2 cut(s) 1138, 1812
SchI GAGTC 2 cut(s) 440, 692
SduI GDGCHC 1 cut(s) 1406
SfaNI GCATC 3 cut(s) 598, 1433, 1473
SfcI CTRYAG 3 cut(s) 863, 1140, 1764
SfuI TTCGAA 2 cut(s) 174, 408
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 2 cut(s) 256, 1876
SmiMI CAYNNNNRTG 1 cut(s) 1031
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
SnaBI TACGTA 1 cut(s) 890
SsiI CCGC 3 cut(s) 58, 137, 794
SspI AATATT 1 cut(s) 297
SspMI CTAG 6 cut(s) 215, 368, 1163, 1227, 1488, 1860
StyI CCWWGG 2 cut(s) 1183, 1301
TaaI ACNGT 4 cut(s) 155, 495, 1600, 1725
TaiI ACGT 2 cut(s) 892, 1713
TaqI TCGA 4 cut(s) 174, 408, 1369, 1427
TatI WGTACW 3 cut(s) 1136, 1344, 1810
TfiI GAWTC 6 cut(s) 376, 424, 737, 1036, 1621, 1745
Tru1I TTAA 9 cut(s) 92, 429, 659, 825, 878, 1017, 1092, 1740, 1872
Tru9I TTAA 9 cut(s) 92, 429, 659, 825, 878, 1017, 1092, 1740, 1872
TscAI CASTG 1 cut(s) 1215
TseFI GTSAC 4 cut(s) 989, 1047, 1214, 1522
TseI GCWGC 5 cut(s) 304, 1760, 1763, 1766, 1769
Tsp45I GTSAC 4 cut(s) 989, 1047, 1214, 1522
TspDTI ATGAA 4 cut(s) 576, 929, 1043, 1375
TspGWI ACGGA 2 cut(s) 1101, 1769
TspRI CASTG 1 cut(s) 1215
Van91I CCANNNNNTGG 1 cut(s) 497
VneI GTGCAC 1 cut(s) 1402
VpaK11BI GGWCC 2 cut(s) 256, 1876
VspI ATTAAT 1 cut(s) 878
XapI RAATTY 2 cut(s) 350, 719
XbaI TCTAGA 1 cut(s) 1859
XceI RCATGY 1 cut(s) 875
XcmI CCANNNNNNNNNTGG 1 cut(s) 250
XmnI GAANNNNTTC 3 cut(s) 155, 788, 974
XspI CTAG 6 cut(s) 215, 368, 1163, 1227, 1488, 1860
ZrmI AGTACT 2 cut(s) 1138, 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.