Rroxscaffold_7G00211290

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001292
Physical Location & Seq
Reverse (-)
61762816 .. 61764732
1917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00211290.1

Sequence Viewer

Length: 1917 bp
ATGGCTTCTCCGTTTTGTCTCCTAGGGCCTTCGGAGCTCCGCCGCCCTAACCTCCCCAAAAACAACCGAACCCTAATGACAACCTCTGAACACCAGGACCATTCGGTCTCACGCTTAAAGCCACTCTTAGAGTTTGTCTTCAAGGATGCACCAGCAGAGAGAATTCCTAAATACAGAGGGGATACGGCTTGGAACGTTGACCCTCTCAAAACCCTCAAGCTTATATTTAGTCTTAGAGTGGCGGGGAAGATCAAGGATGATGGGTTTTACAGAACCATGTTGTGGGTCCACAAAAACCATCCTTTAACCCTAGCTTTGAATCTCAGGGTTTTTGGGGATTTAGGGCTGTTCAAAGATCTGCTGGGAATTCTCCATAAGGTATTGGAGGAATCCATATGTGGACACTATCTGTTGACTCCATATGGGTACTGGTGGACTCCAAATGGGTACTATTTTTCATTCCTTGAAGGGTACCAGTGTTTAGAGAAGGAACAGTTCTATTGGGAAAAAGAGAGGAGAAATAAAATTGAAGAGGTAGTTGCAGCATGGAGAAGAGCAGCTGACATTTCAAAGGCTAAAATTGCAGTTGAGAGGTACCAAAATGACCAAAGGTATCAAAACTTGCATAATCAAGTAGCGGATTTGTTTTCAGAGTTCTTGAAATCAGATGTCAAATTTTTGGAATCGGGTGAGATTGAAAACATCAGTTTTGCAGCCAAATTTTGCCCTTCAATTGATTCCAAATATGATAAAGCAACCCTGATATGTGAAGTCATTGCAAAGAGAATTTTCCCACGCGTAGATTATGAAGAATACAAAGACATTTCAGAACCTCATTATTCTTACAGGGTTCGTAATCGATTGCAGAAACAAGTGCTTGTTCCTCTGCACAAAGTGCTACAGTCATCATCGGTGAACAATGCTGTTGAGAGAAAGAAGTCATGGTCCCGAAACCTTAATGCCCTGAATTGTTTGGAAACTTATTGGGAAATCTACAATTATAGGTGCTCCAGCATTGATAGGGATTTAAGTGAAAGCAGATTAGAACTATTTAAGCTTTACATGAAGATTATGGACAGGTTGGGCATAAAAATTGATGACAGGCTAAAACTTCCTCACCAAGTAATAGCCTTTTTGAACAATACACAGGGTAGTGATGAAATTGCAGATCTTCAGTGGCAGAAACTAGTCCAAGGGCTGTCAAACAAAGGGAAGCTCAGGAATTGTCTTGCTGTGTGTGACAGCTCGTTGAGCATGATAGGGACAGACAAGGAAATGGCGTGCATTGCAATGGGATTATTGATTTCAGAACTGAGTGAGAGTCCATGGAATGGAGTGGTTTTCTCATTCACTAATTTCCCCAAAATTCACAAGATTGTAGGAGAAAGTCTTCGATCGAAGTGCGAGTTCATGAGGCAGATGGAGTGTGATGAGAAAGTGGACTGCTTAGAGATTTACAACCGAGTGTTGGAGATTGCCACCACACAAAAGCTAAACCACATAAAGATGCCAAAGAGGATTTTTGTGTTCACCTACAAGGATTTTGTTGAGGCCTTCAAGTATGATTGGCTGGATGATTACACAGAAGCTTATAACAATTTCAGAAAAAGAGGGTTTGAGTTTAATGTGCCAGAGCTAGTGTTTTGGAATTTGAAGGATTCCATTGCCGAGCCAGAGGTGATTTATAGCCCAGTGAAGGAGAACCAGAGAGTGGGGATCATAATAACAGGGTTCTCTAGCAATCTACTCAGGTTGTTCTTGAAAGGGGAGGCGGATTCAAGATCATATGCAGCTCAATTCCAGGCATCTTACGGTATCGATTTACAGTCAGTACCAAAACTGCTTCCTAGAGTAGAGGATGTGTTTGATAGTGCAATTTCAAGAGAAGAATTAGACAGCCTGGTATTGTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

638

Amino Acids

74.43

Weight (kDa)

7.82

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 59 - 406 5.7e-57 Domain of unknown function (DUF2828)
DUF7788 PF25043 408 - 591 3.4e-42 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1593
AasI GACNNNNNNGTC 1 cut(s) 104
Acc65I GGTACC 2 cut(s) 471, 594
AccB1I GGYRCC 2 cut(s) 471, 594
AccB7I CCANNNNNTGG 3 cut(s) 282, 1331, 1711
AccII CGCG 1 cut(s) 798
AciI CCGC 5 cut(s) 40, 43, 242, 638, 1772
AclI AACGTT 1 cut(s) 195
AclWI GGATC 1 cut(s) 1724
AcsI RAATTY 7 cut(s) 162, 366, 674, 719, 786, 1365, 1648
AcuI CTGAAG 1 cut(s) 1157
AdeI CACNNNGTG 1 cut(s) 895
AfaI GTAC 5 cut(s) 428, 449, 473, 596, 1833
AfiI CCNNNNNNNGG 5 cut(s) 282, 1331, 1468, 1696, 1711
AflIII ACRYGT 1 cut(s) 796
AhlI ACTAGT 1 cut(s) 1186
AjnI CCWGG 3 cut(s) 93, 1800, 1899
Alw21I GWGCWC 2 cut(s) 39, 1010
Alw26I GTCTC 2 cut(s) 23, 112
AlwI GGATC 1 cut(s) 1724
AoxI GGCC 2 cut(s) 26, 1551
ApeKI GCWGC 4 cut(s) 542, 557, 713, 1790
ApoI RAATTY 7 cut(s) 162, 366, 674, 719, 786, 1365, 1648
Asp700I GAANNNNTTC 1 cut(s) 1389
Asp718I GGTACC 2 cut(s) 471, 594
AspA2I CCTAGG 1 cut(s) 22
AspS9I GGNCC 4 cut(s) 26, 97, 286, 945
AsuHPI GGTGA 5 cut(s) 701, 925, 1109, 1522, 1690
AvaII GGWCC 3 cut(s) 97, 286, 945
AvrII CCTAGG 1 cut(s) 22
BaeI ACNNNNGTAYC 2 cut(s) 463, 496
BanI GGYRCC 2 cut(s) 471, 594
BanII GRGCYC 1 cut(s) 39
BbsI GAAGAC 2 cut(s) 130, 1382
Bbv12I GWGCWC 2 cut(s) 39, 1010
BbvI GCAGC 4 cut(s) 554, 569, 725, 1802
BccI CCATC 3 cut(s) 254, 306, 1414
BceAI ACGGC 1 cut(s) 201
BcgI CGANNNNNNTGC 2 cut(s) 1383, 1417
BciT130I CCWGG 3 cut(s) 95, 1802, 1901
BciVI GTATCC 1 cut(s) 175
BcoDI GTCTC 2 cut(s) 23, 112
BcuI ACTAGT 1 cut(s) 1186
BfaI CTAG 6 cut(s) 23, 311, 1187, 1637, 1737, 1848
BfmI CTRYAG 1 cut(s) 899
BfuI GTATCC 1 cut(s) 175
BglII AGATCT 2 cut(s) 355, 1168
BisI GCNGC 5 cut(s) 43, 543, 558, 714, 1791
BlnI CCTAGG 1 cut(s) 22
BlsI GCNGC 5 cut(s) 44, 544, 559, 715, 1792
Bme1390I CCNGG 3 cut(s) 95, 1802, 1901
Bme18I GGWCC 3 cut(s) 97, 286, 945
BmgT120I GGNCC 4 cut(s) 26, 97, 286, 945
BmiI GGNNCC 4 cut(s) 287, 473, 596, 947
BmrFI CCNGG 3 cut(s) 95, 1802, 1901
BmrI ACTGGG 1 cut(s) 1685
BmsI GCATC 3 cut(s) 136, 1497, 1814
BmuI ACTGGG 1 cut(s) 1685
BpiI GAAGAC 2 cut(s) 130, 1382
BpmI CTGGAG 1 cut(s) 994
Bpu10I CCTNAGC 1 cut(s) 1217
BpuEI CTTGAG 1 cut(s) 200
Bsa29I ATCGAT 2 cut(s) 859, 1818
BsaI GGTCTC 1 cut(s) 112
BsaJI CCNNGG 3 cut(s) 22, 1192, 1325
Bsc4I CCNNNNNNNGG 5 cut(s) 282, 1331, 1468, 1696, 1711
Bse1I ACTGG 3 cut(s) 434, 475, 1691
Bse3DI GCAATG 4 cut(s) 774, 1284, 1296, 1662
BseBI CCWGG 3 cut(s) 95, 1802, 1901
BseCI ATCGAT 2 cut(s) 859, 1818
BseDI CCNNGG 3 cut(s) 22, 1192, 1325
BseGI GGATG 5 cut(s) 151, 262, 298, 1579, 1864
BseLI CCNNNNNNNGG 5 cut(s) 282, 1331, 1468, 1696, 1711
BseMI GCAATG 4 cut(s) 774, 1284, 1296, 1662
BseMII CTCAG 4 cut(s) 337, 1231, 1304, 1762
BseNI ACTGG 3 cut(s) 434, 475, 1691
BseRI GAGGAG 1 cut(s) 529
BseXI GCAGC 4 cut(s) 554, 569, 725, 1802
BseYI CCCAGC 1 cut(s) 361
BsgI GTGCAG 1 cut(s) 872
Bsh1236I CGCG 1 cut(s) 798
Bsh1285I CGRYCG 1 cut(s) 1397
BshFI GGCC 2 cut(s) 28, 1553
BshNI GGYRCC 2 cut(s) 471, 594
BshVI ATCGAT 2 cut(s) 859, 1818
BsiEI CGRYCG 1 cut(s) 1397
BsiHKAI GWGCWC 2 cut(s) 39, 1010
BslFI GGGAC 2 cut(s) 931, 1276
BslI CCNNNNNNNGG 5 cut(s) 282, 1331, 1468, 1696, 1711
BsmAI GTCTC 2 cut(s) 23, 112
BsmFI GGGAC 2 cut(s) 931, 1276
BsnI GGCC 2 cut(s) 28, 1553
Bso31I GGTCTC 1 cut(s) 112
Bsp1286I GDGCHC 2 cut(s) 39, 1010
Bsp143I GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
Bsp19I CCATGG 1 cut(s) 1325
BspACI CCGC 5 cut(s) 40, 43, 242, 638, 1772
BspANI GGCC 2 cut(s) 28, 1553
BspCNI CTCAG 4 cut(s) 336, 1230, 1305, 1761
BspDI ATCGAT 2 cut(s) 859, 1818
BspFNI CGCG 1 cut(s) 798
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 4 cut(s) 287, 473, 596, 947
BspPI GGATC 1 cut(s) 1724
BspQI GCTCTTC 1 cut(s) 547
BspT107I GGYRCC 2 cut(s) 471, 594
BspTNI GGTCTC 1 cut(s) 112
BsrDI GCAATG 4 cut(s) 774, 1284, 1296, 1662
BsrI ACTGG 3 cut(s) 434, 475, 1691
BssECI CCNNGG 3 cut(s) 22, 1192, 1325
BssMI GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
BssT1I CCWWGG 3 cut(s) 22, 1192, 1325
Bst2UI CCWGG 3 cut(s) 95, 1802, 1901
Bst4CI ACNGT 4 cut(s) 495, 903, 1814, 1827
Bst6I CTCTTC 2 cut(s) 525, 547
BstAPI GCANNNNNTGC 1 cut(s) 895
BstC8I GCNNGC 1 cut(s) 1282
BstDEI CTNAG 7 cut(s) 127, 233, 323, 1217, 1313, 1447, 1748
BstDSI CCRYGG 1 cut(s) 1325
BstF5I GGATG 5 cut(s) 151, 262, 298, 1579, 1864
BstFNI CGCG 1 cut(s) 798
BstKTI GATC 6 cut(s) 252, 358, 1171, 1397, 1719, 1784
BstMAI GTCTC 2 cut(s) 23, 112
BstMBI GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
BstMCI CGRYCG 1 cut(s) 1397
BstMWI GCNNNNNNNGC 5 cut(s) 34, 581, 895, 1251, 1286
BstNI CCWGG 3 cut(s) 95, 1802, 1901
BstSCI CCNGG 3 cut(s) 93, 1800, 1899
BstSFI CTRYAG 1 cut(s) 899
BstUI CGCG 1 cut(s) 798
BstV1I GCAGC 4 cut(s) 554, 569, 725, 1802
BstV2I GAAGAC 2 cut(s) 130, 1382
BstX2I RGATCY 2 cut(s) 355, 1168
BstYI RGATCY 2 cut(s) 355, 1168
Bsu15I ATCGAT 2 cut(s) 859, 1818
BsuI GTATCC 1 cut(s) 175
BsuRI GGCC 2 cut(s) 28, 1553
BsuTUI ATCGAT 2 cut(s) 859, 1818
BtgI CCRYGG 1 cut(s) 1325
BtsCI GGATG 5 cut(s) 151, 262, 298, 1579, 1864
BtsIMutI CAGTG 3 cut(s) 482, 1181, 1698
Cac8I GCNNGC 1 cut(s) 1282
CciI TCATGA 1 cut(s) 1410
Cfr13I GGNCC 4 cut(s) 26, 97, 286, 945
ClaI ATCGAT 2 cut(s) 859, 1818
Csp6I GTAC 5 cut(s) 427, 448, 472, 595, 1832
CviAII CATG 7 cut(s) 277, 546, 942, 1063, 1255, 1326, 1411
CviQI GTAC 5 cut(s) 427, 448, 472, 595, 1832
DdeI CTNAG 7 cut(s) 127, 233, 323, 1217, 1313, 1447, 1748
DpnI GATC 6 cut(s) 251, 357, 1170, 1396, 1718, 1783
DpnII GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
DraIII CACNNNGTG 1 cut(s) 895
DrdI GACNNNNNNGTC 1 cut(s) 104
DseDI GACNNNNNNGTC 1 cut(s) 104
Eam1104I CTCTTC 2 cut(s) 525, 547
EarI CTCTTC 2 cut(s) 525, 547
EciI GGCGGA 2 cut(s) 29, 1787
Ecl136II GAGCTC 1 cut(s) 37
Eco130I CCWWGG 3 cut(s) 22, 1192, 1325
Eco147I AGGCCT 1 cut(s) 1553
Eco24I GRGCYC 1 cut(s) 39
Eco31I GGTCTC 1 cut(s) 112
Eco47I GGWCC 3 cut(s) 97, 286, 945
Eco53kI GAGCTC 1 cut(s) 37
Eco57I CTGAAG 1 cut(s) 1157
EcoICRI GAGCTC 1 cut(s) 37
EcoO109I RGGNCCY 1 cut(s) 26
EcoRI GAATTC 2 cut(s) 162, 366
EcoRII CCWGG 3 cut(s) 93, 1800, 1899
EcoT14I CCWWGG 3 cut(s) 22, 1192, 1325
EcoT38I GRGCYC 1 cut(s) 39
ErhI CCWWGG 3 cut(s) 22, 1192, 1325
FaeI CATG 7 cut(s) 280, 549, 945, 1066, 1258, 1329, 1414
FalI AAGNNNNNCTT 2 cut(s) 110, 142
FaqI GGGAC 2 cut(s) 931, 1276
FatI CATG 7 cut(s) 276, 545, 941, 1062, 1254, 1325, 1410
FauI CCCGC 1 cut(s) 235
FauNDI CATATG 3 cut(s) 395, 421, 1786
Fnu4HI GCNGC 5 cut(s) 43, 543, 558, 714, 1791
FokI GGATG 5 cut(s) 158, 269, 285, 1586, 1871
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 5 cut(s) 43, 543, 558, 714, 1791
FspBI CTAG 6 cut(s) 23, 311, 1187, 1637, 1737, 1848
GluI GCNGC 5 cut(s) 43, 543, 558, 714, 1791
GsaI CCCAGC 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 994
HaeIII GGCC 2 cut(s) 28, 1553
Hin1II CATG 7 cut(s) 280, 549, 945, 1066, 1258, 1329, 1414
HincII GTYRAC 2 cut(s) 199, 414
HindII GTYRAC 2 cut(s) 199, 414
HindIII AAGCTT 3 cut(s) 218, 1055, 1587
HinfI GANTC 9 cut(s) 319, 389, 415, 436, 683, 737, 1321, 1658, 1775
HphI GGTGA 5 cut(s) 701, 925, 1109, 1522, 1690
Hpy166II GTNNAC 8 cut(s) 199, 289, 401, 414, 435, 916, 1441, 1530
Hpy188I TCNGA 7 cut(s) 34, 88, 652, 667, 829, 1309, 1604
Hpy188III TCNNGA 7 cut(s) 658, 948, 1219, 1411, 1759, 1779, 1881
Hpy8I GTNNAC 8 cut(s) 199, 289, 401, 414, 435, 916, 1441, 1530
HpyAV CCTTC 7 cut(s) 39, 461, 481, 738, 1564, 1648, 1690
HpyCH4III ACNGT 4 cut(s) 495, 903, 1814, 1827
HpyCH4IV ACGT 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 5 cut(s) 34, 581, 895, 1251, 1286
HpyF3I CTNAG 7 cut(s) 127, 233, 323, 1217, 1313, 1447, 1748
HpySE526I ACGT 1 cut(s) 195
Hsp92II CATG 7 cut(s) 280, 549, 945, 1066, 1258, 1329, 1414
KpnI GGTACC 2 cut(s) 475, 598
Kzo9I GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
LguI GCTCTTC 1 cut(s) 547
LmnI GCTCC 3 cut(s) 34, 42, 1013
Lsp1109I GCAGC 4 cut(s) 554, 569, 725, 1802
LweI GCATC 3 cut(s) 136, 1497, 1814
MaeI CTAG 6 cut(s) 23, 311, 1187, 1637, 1737, 1848
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 1 cut(s) 1238
MalI GATC 6 cut(s) 251, 357, 1170, 1396, 1718, 1783
MboI GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
MboII GAAGA 9 cut(s) 130, 259, 542, 564, 821, 1078, 1163, 1382, 1898
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 2 cut(s) 355, 1168
MhlI GDGCHC 2 cut(s) 39, 1010
MluI ACGCGT 1 cut(s) 796
MlyI GAGTC 3 cut(s) 409, 430, 1330
MmeI TCCRAC 1 cut(s) 1449
MroXI GAANNNNTTC 1 cut(s) 1389
MseI TTAA 6 cut(s) 116, 305, 957, 1028, 1053, 1623
MslI CAYNNNNRTG 2 cut(s) 1289, 1505
MspA1I CMGCKG 1 cut(s) 560
MspR9I CCNGG 3 cut(s) 95, 1802, 1901
MunI CAATTG 1 cut(s) 732
MvaI CCWGG 3 cut(s) 95, 1802, 1901
MvnI CGCG 1 cut(s) 798
MwoI GCNNNNNNNGC 5 cut(s) 34, 581, 895, 1251, 1286
NcoI CCATGG 1 cut(s) 1325
NdeI CATATG 3 cut(s) 395, 421, 1786
NdeII GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
NlaIII CATG 7 cut(s) 280, 549, 945, 1066, 1258, 1329, 1414
NlaIV GGNNCC 4 cut(s) 287, 473, 596, 947
NmeAIII GCCGAG 1 cut(s) 1693
NmuCI GTSAC 1 cut(s) 1238
PagI TCATGA 1 cut(s) 1410
PceI AGGCCT 1 cut(s) 1553
PciSI GCTCTTC 1 cut(s) 547
PdmI GAANNNNTTC 1 cut(s) 1389
PfeI GAWTC 6 cut(s) 319, 389, 683, 737, 1658, 1775
PflMI CCANNNNNTGG 3 cut(s) 282, 1331, 1711
PkrI GCNGC 5 cut(s) 44, 544, 559, 715, 1792
Ple19I CGATCG 1 cut(s) 1397
PleI GAGTC 3 cut(s) 409, 430, 1329
PpsI GAGTC 3 cut(s) 409, 430, 1329
PsiI TTATAA 1 cut(s) 1593
Psp124BI GAGCTC 1 cut(s) 39
Psp1406I AACGTT 1 cut(s) 195
Psp6I CCWGG 3 cut(s) 93, 1800, 1899
PspFI CCCAGC 1 cut(s) 361
PspGI CCWGG 3 cut(s) 93, 1800, 1899
PspN4I GGNNCC 4 cut(s) 287, 473, 596, 947
PspPI GGNCC 4 cut(s) 26, 97, 286, 945
PsuI RGATCY 2 cut(s) 355, 1168
PvuI CGATCG 1 cut(s) 1397
PvuII CAGCTG 1 cut(s) 560
RsaI GTAC 5 cut(s) 428, 449, 473, 596, 1833
RsaNI GTAC 5 cut(s) 427, 448, 472, 595, 1832
RseI CAYNNNNRTG 2 cut(s) 1289, 1505
SacI GAGCTC 1 cut(s) 39
SapI GCTCTTC 1 cut(s) 547
SaqAI TTAA 6 cut(s) 116, 305, 957, 1028, 1053, 1623
SatI GCNGC 5 cut(s) 43, 543, 558, 714, 1791
Sau3AI GATC 6 cut(s) 249, 355, 1168, 1394, 1716, 1781
Sau96I GGNCC 4 cut(s) 26, 97, 286, 945
SchI GAGTC 3 cut(s) 409, 430, 1330
ScrFI CCNGG 3 cut(s) 95, 1802, 1901
SduI GDGCHC 2 cut(s) 39, 1010
SfaNI GCATC 3 cut(s) 136, 1497, 1814
SfcI CTRYAG 1 cut(s) 899
SinI GGWCC 3 cut(s) 97, 286, 945
SmiMI CAYNNNNRTG 2 cut(s) 1289, 1505
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
SpeI ACTAGT 1 cut(s) 1186
SseBI AGGCCT 1 cut(s) 1553
SsiI CCGC 5 cut(s) 40, 43, 242, 638, 1772
SspMI CTAG 6 cut(s) 23, 311, 1187, 1637, 1737, 1848
SstI GAGCTC 1 cut(s) 39
StuI AGGCCT 1 cut(s) 1553
StyD4I CCNGG 3 cut(s) 93, 1800, 1899
StyI CCWWGG 3 cut(s) 22, 1192, 1325
TaaI ACNGT 4 cut(s) 495, 903, 1814, 1827
TaiI ACGT 1 cut(s) 198
TaqI TCGA 4 cut(s) 859, 1393, 1397, 1818
TaqII GACCGA 1 cut(s) 94
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 6 cut(s) 319, 389, 683, 737, 1658, 1775
Tru1I TTAA 6 cut(s) 116, 305, 957, 1028, 1053, 1623
Tru9I TTAA 6 cut(s) 116, 305, 957, 1028, 1053, 1623
TscAI CASTG 3 cut(s) 482, 1181, 1698
TseFI GTSAC 1 cut(s) 1238
TseI GCWGC 4 cut(s) 542, 557, 713, 1790
Tsp45I GTSAC 1 cut(s) 1238
TspDTI ATGAA 5 cut(s) 447, 822, 1079, 1173, 1399
TspRI CASTG 3 cut(s) 482, 1181, 1698
Van91I CCANNNNNTGG 3 cut(s) 282, 1331, 1711
VpaK11BI GGWCC 3 cut(s) 97, 286, 945
XapI RAATTY 7 cut(s) 162, 366, 674, 719, 786, 1365, 1648
XcmI CCANNNNNNNNNTGG 1 cut(s) 426
XmaJI CCTAGG 1 cut(s) 22
XmnI GAANNNNTTC 1 cut(s) 1389
XspI CTAG 6 cut(s) 23, 311, 1187, 1637, 1737, 1848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.